Rw6G004080

UDP-glycosyltransferase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr6
OG0000284
Physical Location & Seq
Reverse (-)
6635791 .. 6637651
1861 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw6G004080.1

Sequence Viewer

Length: 1350 bp
ATGGAGAAAGAACAGAGAGTCTACAAAGCTCACTGTTTGGTCTTTCCCTATCCTAGTCAAGGCCATATTAACCCTTTGCTCCAATTTTCTAAGCTTTTAGATCACAAAGGAGTCAAAGTTACACTGGTCACTACTCGTTTTATCTACAATACAATGTACAGGGGATCAAGTTGCACTGCACTTGAGACTATCTCACTGGAGACCATCTCCGATGGTTATGACGAAGGTTGGAAAACGCAGGGAGCAAGTATTCAGGTGTATTTGGAGAGCCTTCGGAAAGTAGGGTCGCAGAGTTTGGCTGAGCTCCTTGAGAAGCTATCCGGCTCAGGGTGCCCAGTTGACTGTCTTGTTTATGATGCATTCATGCCTTGGCCTTTGGACATTGCCAAGAAGTTTGGAATAGTTGGGGCTGTTTTCTTTACTCAGTCTTGTGCTGTTGACAATATTTACAATCATGTCAACAAAGGGCTACTGAAAGTTCCTCTTACTGACTCTGAAATTTCACTTCCCGGGATGCCAGCACTTGAGCCTTTGGACCTGCCATCTTTTGTTTATGATTTCGGCTCTTACCCAACTTTCTTTGAAGTTGTTATCGGTCAGTTCTCCAATGTTGACAAAGCCGATTGGGTCCTCTGCAACACATTTTATGAGTTGGAAGAAAAAGTGGTGGAATGGATGGCAAAATTTTGGACACTGAGGACCATTGGACCAACTATACCATCTAACTACTTGGATAACCGACTTGAAGACGACAAAGCTTATGGTGTTGACCTATTTAAATCCAACAATGAGGCCTGCATGAAATGGTTAAACGAACATGCAAAGAACTCTGTTTCTTACATTTCATTCGGCAGCGCTGCACAACTTGGACTTGAGCAAATGGAGGAACTGGCATGGGGTTTGAGGAGGAGCAAAACCAAGTTCTTGTGGGTGATTAGAGAATCAGAAGCAGCAAAAGGTTTGGTGGTTTCATGGTGCTCCCAACTGGAGGTTTTGGCTCATGAGGCTGTTGGATGCTTCATTACACATTGTGGTTGGAACTCGACTTTAGAGGCTTTAAGTTTGGGGGTCCCTTTAGTGGCAATGCCACAATGGACCGATCAAAGCACCAATGCCAAGTACATTAGGGATGTGTGGAAAATAGGGGTTAAAGCTCAACCTGATGAGAAAGGCATCGTAAGGCGAGAAGAAGTAGAGCATTGTATAAGTGAAATCATGGAGGGGGAGAGAGGAAAAGAAATACAAAAGAATGCCATGAAATGGAAAGATTTGGCCAGAGAGGCAGTGATTGAAGGCGGAAGTTCCGACAAAAACATTGATGAGTTCATTGCAACGTTGGTCAAGCGTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000302 GO:0001101 GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0006082 GO:0006520 GO:0006725 GO:0006807 GO:0006950 GO:0006970 GO:0006972 GO:0006979 GO:0007154 GO:0007275 GO:0008150 GO:0008152 GO:0008194 GO:0009072 GO:0009414 GO:0009415 GO:0009605 GO:0009628 GO:0009636 GO:0009651 GO:0009653 GO:0009696 GO:0009719 GO:0009725 GO:0009737 GO:0009850 GO:0009987 GO:0009991 GO:0010016 GO:0010029 GO:0010030 GO:0010033 GO:0010035 GO:0010817 GO:0016740 GO:0016757 GO:0016758 GO:0016999 GO:0017144 GO:0018874 GO:0018958 GO:0019752 GO:0031668 GO:0032501 GO:0032502 GO:0032787 GO:0032870 GO:0033554 GO:0033993 GO:0034599 GO:0034614 GO:0034641 GO:0035251 GO:0035690 GO:0042221 GO:0042430 GO:0042445 GO:0042493 GO:0042537 GO:0042538 GO:0042542 GO:0042631 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043436 GO:0044237 GO:0044238 GO:0044281 GO:0044424 GO:0044444 GO:0044464 GO:0046482 GO:0046483 GO:0046527 GO:0046677 GO:0048367 GO:0048518 GO:0048580 GO:0048582 GO:0048731 GO:0048856 GO:0050789 GO:0050793 GO:0050896 GO:0051094 GO:0051239 GO:0051240 GO:0051716 GO:0052638 GO:0052639 GO:0052640 GO:0052641 GO:0065007 GO:0065008 GO:0070301 GO:0070887 GO:0071214 GO:0071215 GO:0071229 GO:0071236 GO:0071310 GO:0071396 GO:0071462 GO:0071470 GO:0071472 GO:0071474 GO:0071475 GO:0071495 GO:0071496 GO:0071704 GO:0080002 GO:0080024 GO:0080043 GO:0080044 GO:0080167 GO:0090704 GO:0097237 GO:0097305 GO:0097306 GO:0104004 GO:1900140 GO:1901360 GO:1901564 GO:1901615 GO:1901700 GO:1901701 GO:2000026
KEGG Pathways
Metabolic & Signaling
ko00380 ko00966 ko01110 ko01210 map00380 map00966 map01110 map01210
Pfam Domains
Protein Families
UDPGT

Protein Analysis

449

Amino Acids

50.61

Weight (kDa)

5.33

Isoelectric Point (pI)

40.23

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
UDPGT PF00201 265 - 424 1.2e-22 UDP-glucoronosyl and UDP-glucosyl transferase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000284)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G05675 AT1G05680
fragaria_vesca FvH4_2g03180 FvH4_2g03250 FvH4_2g03250 FvH4_2g03260 FvH4_2g03280 FvH4_2g03282 FvH4_2g03300 FvH4_2g17430 FvH4_3g07860
malus_domestica MD05G1106600.v1.1 MD10G1111000.v1.1 MD10G1111100.v1.1 MD10G1111300.v1.1 MD15G1305500.v1.1 MD15G1357700.v1.1 MD16G1086200.v1.1
prunus_persica Prupe.1G505100_v2.0.a1 Prupe.1G505200_v2.0.a1 Prupe.6G211600_v2.0.a1 Prupe.8G150600_v2.0.a1 Prupe.8G150700_v2.0.a1 Prupe.8G185900_v2.0.a1 Prupe.8G186000_v2.0.a1 Prupe.8G186100_v2.0.a1 Prupe.8G186200_v2.0.a1 Prupe.I000900_v2.0.a1 Prupe.I001000_v2.0.a1
pyrus_communis pycom10g09600 pycom10g09610 pycom10g09620 pycom15g31960
rosa_chinensis RchiOBHm_Chr6g0248151 RchiOBHm_Chr6g0248201 RchiOBHm_Chr6g0248231 RchiOBHm_Chr6g0248251 RchiOBHm_Chr6g0248261 RchiOBHm_Chr6g0248271 RchiOBHm_Chr6g0248321 RchiOBHm_Chr6g0248331 RchiOBHm_Chr6g0248381 RchiOBHm_Chr6g0248391 RchiOBHm_Chr6g0248401 RchiOBHm_Chr6g0248411 RchiOBHm_Chr6g0248421 RchiOBHm_Chr6g0282101 RchiOBHm_Chr6g0282111
rosa_laevigata RLG00000012908 RLG00000012910 RLG00000015155 RLG00000015156 RLG00000015157 RLG00000015158 RLG00000015159 RLG00000015162
rosa_multiflora Rmu_co8202196.1_g000001 Rmu_co8203792.1_g000001 Rmu_co8228231.1_g000001 Rmu_co8347131.1_g000001 Rmu_sc0000569.1_g000027 Rmu_sc0001700.1_g000052 Rmu_sc0002553.1_g000004 Rmu_sc0002553.1_g000005 Rmu_sc0004210.1_g000002 Rmu_sc0004295.1_g000009 Rmu_sc0004295.1_g000028 Rmu_sc0004295.1_g000034 Rmu_sc0005018.1_g000004 Rmu_sc0005018.1_g000007 Rmu_sc0015195.1_g000002 Rmu_sc0017247.1_g000001 Rmu_sc0041438.1_g000001
rosa_roxburghii Rroxscaffold_7G00186520 Rroxscaffold_7G00186550 Rroxscaffold_7G00213300 Rroxscaffold_7G00213340 Rroxscaffold_7G00213380 Rroxscaffold_7G00213400 Rroxscaffold_7G00213450
rosa_rugosa Rorug05G0530300 Rorug05G0531000 Rorug05G0531100 Rorug05G0552500 Rorug05G0552500 Rorug06G0145500
rosa_samantha Rh2AG004400 Rh6AG045600 Rh6AG045900 Rh6AG046200 Rh6AG046500 Rh6AG046700 Rh6AG258500 Rh6BG041200 Rh6BG041600 Rh6BG041700 Rh6BG041900 Rh6BG042000 Rh6BG042500 Rh6BG043000 Rh6BG043100 Rh6BG043200 Rh6BG043300 Rh6BG043400 Rh6BG261900 Rh6CG038700 Rh6CG038900 Rh6CG039100 Rh6CG039400 Rh6CG039700 Rh6CG039800 Rh6CG039900 Rh6CG040000 Rh6CG040100 Rh6CG260800
rosa_wichuraiana Rw6G003950 Rw6G003970 Rw6G003980 Rw6G004010 Rw6G004050 Rw6G004060 Rw6G004070 Rw6G004080 Rw6G022370 Rw6G022380

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 546
AccB1I GGYRCC 1 cut(s) 330
AccB7I CCANNNNNTGG 1 cut(s) 1260
AccI GTMKAC 1 cut(s) 21
AciI CCGC 1 cut(s) 1296
AclI AACGTT 1 cut(s) 1334
AclWI GGATC 1 cut(s) 172
AcoI YGGCCR 1 cut(s) 1272
AcsI RAATTY 2 cut(s) 498, 683
AdeI CACNNNGTG 1 cut(s) 1031
AfaI GTAC 2 cut(s) 158, 1121
AfeI AGCGCT 1 cut(s) 856
AfiI CCNNNNNNNGG 5 cut(s) 59, 327, 988, 1078, 1260
AgsI TTSAA 3 cut(s) 584, 746, 1292
AluBI AGCT 6 cut(s) 29, 94, 304, 316, 758, 1154
AluI AGCT 6 cut(s) 29, 94, 304, 316, 758, 1154
Alw21I GWGCWC 2 cut(s) 306, 980
Alw26I GTCTC 2 cut(s) 179, 194
AlwI GGATC 1 cut(s) 172
Ama87I CYCGRG 1 cut(s) 509
Aor51HI AGCGCT 1 cut(s) 856
AoxI GGCC 4 cut(s) 61, 371, 792, 1272
ApeKI GCWGC 3 cut(s) 852, 857, 950
ApoI RAATTY 2 cut(s) 498, 683
AspLEI GCGC 1 cut(s) 857
AspS9I GGNCC 6 cut(s) 535, 628, 699, 707, 1069, 1095
AsuC2I CCSGG 2 cut(s) 510, 511
AsuHPI GGTGA 1 cut(s) 943
AvaI CYCGRG 1 cut(s) 509
AvaII GGWCC 6 cut(s) 535, 628, 699, 707, 1069, 1095
BaeGI GKGCMC 1 cut(s) 335
BalI TGGCCA 1 cut(s) 1274
BanI GGYRCC 1 cut(s) 330
BanII GRGCYC 1 cut(s) 306
BbsI GAAGAC 1 cut(s) 753
Bbv12I GWGCWC 2 cut(s) 306, 980
BbvI GCAGC 3 cut(s) 844, 864, 962
BccI CCATC 5 cut(s) 206, 212, 550, 670, 727
BcnI CCSGG 2 cut(s) 510, 511
BcoDI GTCTC 2 cut(s) 179, 194
BfaI CTAG 1 cut(s) 54
BfoI RGCGCY 1 cut(s) 858
BfuAI ACCTGC 1 cut(s) 546
BglI GCCNNNNNGGC 1 cut(s) 1280
BisI GCNGC 3 cut(s) 853, 858, 951
BlpI GCTNAGC 1 cut(s) 300
BlsI GCNGC 3 cut(s) 854, 859, 952
Bme1390I CCNGG 2 cut(s) 510, 511
Bme18I GGWCC 6 cut(s) 535, 628, 699, 707, 1069, 1095
BmeT110I CYCGRG 1 cut(s) 509
BmgT120I GGNCC 6 cut(s) 535, 628, 699, 707, 1069, 1095
BmiI GGNNCC 4 cut(s) 332, 629, 1070, 1071
BmrFI CCNGG 2 cut(s) 510, 511
BmrI ACTGGG 1 cut(s) 329
BmsI GCATC 4 cut(s) 346, 504, 1004, 1182
BmuI ACTGGG 1 cut(s) 329
BpiI GAAGAC 1 cut(s) 753
BplI GAGNNNNNCTC 4 cut(s) 176, 208, 191, 223
BpmI CTGGAG 2 cut(s) 218, 1007
Bpu10I CCTNAGC 1 cut(s) 325
Bpu1102I GCTNAGC 1 cut(s) 300
BpuEI CTTGAG 4 cut(s) 203, 329, 545, 893
BpuMI CCSGG 2 cut(s) 510, 511
BsaI GGTCTC 1 cut(s) 194
BsaJI CCNNGG 2 cut(s) 368, 509
BsaXI ACNNNNNCTCC 2 cut(s) 102, 132
Bsc4I CCNNNNNNNGG 5 cut(s) 59, 327, 988, 1078, 1260
Bse1I ACTGG 5 cut(s) 129, 201, 335, 894, 990
Bse3DI GCAATG 3 cut(s) 381, 1089, 1326
BseDI CCNNGG 2 cut(s) 368, 509
BseGI GGATG 4 cut(s) 519, 681, 1019, 1135
BseLI CCNNNNNNNGG 5 cut(s) 59, 327, 988, 1078, 1260
BseMI GCAATG 3 cut(s) 381, 1089, 1326
BseMII CTCAG 4 cut(s) 291, 339, 437, 686
BseNI ACTGG 5 cut(s) 129, 201, 335, 894, 990
BseRI GAGGAG 2 cut(s) 919, 922
BseSI GKGCMC 1 cut(s) 335
BseXI GCAGC 3 cut(s) 844, 864, 962
BsgI GTGCAG 2 cut(s) 162, 843
BshFI GGCC 4 cut(s) 63, 373, 794, 1274
BshNI GGYRCC 1 cut(s) 330
BsiHKAI GWGCWC 2 cut(s) 306, 980
BsiHKCI CYCGRG 1 cut(s) 509
BsiSI CCGG 2 cut(s) 321, 510
BslFI GGGAC 1 cut(s) 1055
BslI CCNNNNNNNGG 5 cut(s) 59, 327, 988, 1078, 1260
BsmAI GTCTC 2 cut(s) 179, 194
BsmFI GGGAC 1 cut(s) 1055
BsmI GAATGC 2 cut(s) 359, 1255
BsnI GGCC 4 cut(s) 63, 373, 794, 1274
Bso31I GGTCTC 1 cut(s) 194
BsoBI CYCGRG 1 cut(s) 509
Bsp1286I GDGCHC 3 cut(s) 306, 335, 980
Bsp1407I TGTACA 1 cut(s) 156
Bsp143I GATC 3 cut(s) 100, 164, 1099
Bsp1720I GCTNAGC 1 cut(s) 300
BspACI CCGC 1 cut(s) 1296
BspANI GGCC 4 cut(s) 63, 373, 794, 1274
BspCNI CTCAG 4 cut(s) 292, 338, 436, 687
BspHI TCATGA 1 cut(s) 1000
BspLI GGNNCC 4 cut(s) 332, 629, 1070, 1071
BspMI ACCTGC 1 cut(s) 546
BspPI GGATC 1 cut(s) 172
BspT107I GGYRCC 1 cut(s) 330
BspTNI GGTCTC 1 cut(s) 194
BsrDI GCAATG 3 cut(s) 381, 1089, 1326
BsrGI TGTACA 1 cut(s) 156
BsrI ACTGG 5 cut(s) 129, 201, 335, 894, 990
BssECI CCNNGG 2 cut(s) 368, 509
BssMI GATC 3 cut(s) 100, 164, 1099
BssT1I CCWWGG 1 cut(s) 368
Bst4CI ACNGT 2 cut(s) 35, 344
BstAUI TGTACA 1 cut(s) 156
BstC8I GCNNGC 2 cut(s) 519, 796
BstDEI CTNAG 5 cut(s) 90, 300, 325, 423, 695
BstENI CCTNNNNNAGG 1 cut(s) 57
BstF5I GGATG 4 cut(s) 519, 681, 1019, 1135
BstH2I RGCGCY 1 cut(s) 858
BstHHI GCGC 1 cut(s) 857
BstKTI GATC 3 cut(s) 103, 167, 1102
BstMAI GTCTC 2 cut(s) 179, 194
BstMBI GATC 3 cut(s) 100, 164, 1099
BstMWI GCNNNNNNNGC 3 cut(s) 330, 1004, 1280
BstNSI RCATGY 1 cut(s) 821
BstSCI CCNGG 2 cut(s) 508, 509
BstSLI GKGCMC 1 cut(s) 335
BstV1I GCAGC 3 cut(s) 844, 864, 962
BstV2I GAAGAC 1 cut(s) 753
BsuRI GGCC 4 cut(s) 63, 373, 794, 1274
BtsCI GGATG 4 cut(s) 519, 681, 1019, 1135
BtsI GCAGTG 2 cut(s) 174, 1290
BtsIMutI CAGTG 6 cut(s) 31, 122, 174, 194, 692, 1290
BveI ACCTGC 1 cut(s) 546
Cac8I GCNNGC 2 cut(s) 519, 796
CciI TCATGA 1 cut(s) 1000
CfoI GCGC 1 cut(s) 857
Cfr13I GGNCC 6 cut(s) 535, 628, 699, 707, 1069, 1095
Cfr9I CCCGGG 1 cut(s) 509
Csp6I GTAC 2 cut(s) 157, 1120
CviAII CATG 9 cut(s) 364, 455, 799, 818, 894, 972, 1001, 1216, 1255
CviQI GTAC 2 cut(s) 157, 1120
DdeI CTNAG 5 cut(s) 90, 300, 325, 423, 695
DpnI GATC 3 cut(s) 102, 166, 1101
DpnII GATC 3 cut(s) 100, 164, 1099
DraI TTTAAA 1 cut(s) 778
DraIII CACNNNGTG 1 cut(s) 1031
EaeI YGGCCR 1 cut(s) 1272
EciI GGCGGA 1 cut(s) 1311
Ecl136II GAGCTC 1 cut(s) 304
Eco130I CCWWGG 1 cut(s) 368
Eco147I AGGCCT 1 cut(s) 794
Eco24I GRGCYC 1 cut(s) 306
Eco31I GGTCTC 1 cut(s) 194
Eco47I GGWCC 6 cut(s) 535, 628, 699, 707, 1069, 1095
Eco47III AGCGCT 1 cut(s) 856
Eco53kI GAGCTC 1 cut(s) 304
Eco88I CYCGRG 1 cut(s) 509
EcoICRI GAGCTC 1 cut(s) 304
EcoNI CCTNNNNNAGG 1 cut(s) 57
EcoO109I RGGNCCY 2 cut(s) 628, 1069
EcoT14I CCWWGG 1 cut(s) 368
EcoT22I ATGCAT 1 cut(s) 361
EcoT38I GRGCYC 1 cut(s) 306
ErhI CCWWGG 1 cut(s) 368
FaeI CATG 9 cut(s) 367, 458, 802, 821, 897, 975, 1004, 1219, 1258
FalI AAGNNNNNCTT 2 cut(s) 468, 500
FaqI GGGAC 1 cut(s) 1055
FatI CATG 9 cut(s) 363, 454, 798, 817, 893, 971, 1000, 1215, 1254
FblI GTMKAC 1 cut(s) 21
Fnu4HI GCNGC 3 cut(s) 853, 858, 951
FokI GGATG 4 cut(s) 526, 688, 1026, 1142
FriOI GRGCYC 1 cut(s) 306
Fsp4HI GCNGC 3 cut(s) 853, 858, 951
FspBI CTAG 1 cut(s) 54
GlaI GCGC 1 cut(s) 856
GluI GCNGC 3 cut(s) 853, 858, 951
GsuI CTGGAG 2 cut(s) 218, 1007
HaeII RGCGCY 1 cut(s) 858
HaeIII GGCC 4 cut(s) 63, 373, 794, 1274
HapII CCGG 2 cut(s) 321, 510
HhaI GCGC 1 cut(s) 857
Hin1II CATG 9 cut(s) 367, 458, 802, 821, 897, 975, 1004, 1219, 1258
Hin6I GCGC 1 cut(s) 855
HinP1I GCGC 1 cut(s) 855
HincII GTYRAC 5 cut(s) 340, 439, 460, 613, 769
HindII GTYRAC 5 cut(s) 340, 439, 460, 613, 769
HindIII AAGCTT 2 cut(s) 92, 756
HinfI GANTC 4 cut(s) 18, 111, 491, 941
HpaII CCGG 2 cut(s) 321, 510
HphI GGTGA 1 cut(s) 943
Hpy166II GTNNAC 6 cut(s) 22, 340, 439, 460, 613, 769
Hpy188I TCNGA 5 cut(s) 211, 276, 496, 946, 1306
Hpy188III TCNNGA 1 cut(s) 1001
Hpy8I GTNNAC 6 cut(s) 22, 340, 439, 460, 613, 769
HpyAV CCTTC 3 cut(s) 218, 281, 1286
HpyCH4III ACNGT 2 cut(s) 35, 344
HpyCH4IV ACGT 1 cut(s) 1334
HpyCH4V TGCA 8 cut(s) 174, 179, 359, 636, 798, 821, 860, 1331
HpyF10VI GCNNNNNNNGC 3 cut(s) 330, 1004, 1280
HpyF3I CTNAG 5 cut(s) 90, 300, 325, 423, 695
HpySE526I ACGT 1 cut(s) 1334
Hsp92II CATG 9 cut(s) 367, 458, 802, 821, 897, 975, 1004, 1219, 1258
HspAI GCGC 1 cut(s) 855
KflI GGGWCCC 1 cut(s) 1069
Kzo9I GATC 3 cut(s) 100, 164, 1099
LmnI GCTCC 5 cut(s) 84, 242, 309, 909, 983
Lsp1109I GCAGC 3 cut(s) 844, 864, 962
LweI GCATC 4 cut(s) 346, 504, 1004, 1182
MaeI CTAG 1 cut(s) 54
MaeII ACGT 1 cut(s) 1334
MaeIII GTNAC 2 cut(s) 118, 127
MalI GATC 3 cut(s) 102, 166, 1101
MboI GATC 3 cut(s) 100, 164, 1099
MboII GAAGA 3 cut(s) 668, 758, 1199
MhlI GDGCHC 3 cut(s) 306, 335, 980
MlsI TGGCCA 1 cut(s) 1274
MluCI AATT 3 cut(s) 83, 498, 683
MluNI TGGCCA 1 cut(s) 1274
MlyI GAGTC 3 cut(s) 27, 120, 485
MmeI TCCRAC 6 cut(s) 209, 633, 807, 991, 1016, 1329
Mox20I TGGCCA 1 cut(s) 1274
Mph1103I ATGCAT 1 cut(s) 361
MscI TGGCCA 1 cut(s) 1274
MseI TTAA 6 cut(s) 69, 777, 809, 1058, 1149, 1348
Msp20I TGGCCA 1 cut(s) 1274
MspI CCGG 2 cut(s) 321, 510
MspR9I CCNGG 2 cut(s) 510, 511
Mva1269I GAATGC 2 cut(s) 359, 1255
MwoI GCNNNNNNNGC 3 cut(s) 330, 1004, 1280
NciI CCSGG 2 cut(s) 510, 511
NdeII GATC 3 cut(s) 100, 164, 1099
NlaIII CATG 9 cut(s) 367, 458, 802, 821, 897, 975, 1004, 1219, 1258
NlaIV GGNNCC 4 cut(s) 332, 629, 1070, 1071
NmuCI GTSAC 1 cut(s) 127
NsiI ATGCAT 1 cut(s) 361
NspI RCATGY 1 cut(s) 821
PagI TCATGA 1 cut(s) 1000
PceI AGGCCT 1 cut(s) 794
PctI GAATGC 2 cut(s) 359, 1255
PfeI GAWTC 1 cut(s) 941
PflMI CCANNNNNTGG 1 cut(s) 1260
PkrI GCNGC 3 cut(s) 854, 859, 952
PleI GAGTC 3 cut(s) 26, 119, 485
PpsI GAGTC 3 cut(s) 26, 119, 485
PpuMI RGGWCCY 2 cut(s) 628, 1069
Psp124BI GAGCTC 1 cut(s) 306
Psp1406I AACGTT 1 cut(s) 1334
Psp5II RGGWCCY 2 cut(s) 628, 1069
PspN4I GGNNCC 4 cut(s) 332, 629, 1070, 1071
PspPI GGNCC 6 cut(s) 535, 628, 699, 707, 1069, 1095
PspPPI RGGWCCY 2 cut(s) 628, 1069
RsaI GTAC 2 cut(s) 158, 1121
RsaNI GTAC 2 cut(s) 157, 1120
SacI GAGCTC 1 cut(s) 306
SaqAI TTAA 6 cut(s) 69, 777, 809, 1058, 1149, 1348
SatI GCNGC 3 cut(s) 853, 858, 951
Sau3AI GATC 3 cut(s) 100, 164, 1099
Sau96I GGNCC 6 cut(s) 535, 628, 699, 707, 1069, 1095
SchI GAGTC 3 cut(s) 27, 120, 485
ScrFI CCNGG 2 cut(s) 510, 511
SduI GDGCHC 3 cut(s) 306, 335, 980
SfaNI GCATC 4 cut(s) 346, 504, 1004, 1182
SinI GGWCC 6 cut(s) 535, 628, 699, 707, 1069, 1095
SmaI CCCGGG 1 cut(s) 511
SmiI ATTTAAAT 1 cut(s) 778
SmlI CTYRAG 4 cut(s) 182, 308, 524, 872
SmoI CTYRAG 4 cut(s) 182, 308, 524, 872
Sse9I AATT 3 cut(s) 83, 498, 683
SseBI AGGCCT 1 cut(s) 794
SsiI CCGC 1 cut(s) 1296
SspI AATATT 1 cut(s) 445
SspMI CTAG 1 cut(s) 54
SstI GAGCTC 1 cut(s) 306
StuI AGGCCT 1 cut(s) 794
StyD4I CCNGG 2 cut(s) 508, 509
StyI CCWWGG 1 cut(s) 368
SwaI ATTTAAAT 1 cut(s) 778
TaaI ACNGT 2 cut(s) 35, 344
TaiI ACGT 1 cut(s) 1337
TaqI TCGA 1 cut(s) 1043
TaqII GACCGA 2 cut(s) 584, 1112
TasI AATT 3 cut(s) 83, 498, 683
TatI WGTACW 2 cut(s) 156, 1119
TfiI GAWTC 1 cut(s) 941
Tru1I TTAA 6 cut(s) 69, 777, 809, 1058, 1149, 1348
Tru9I TTAA 6 cut(s) 69, 777, 809, 1058, 1149, 1348
TscAI CASTG 6 cut(s) 38, 129, 181, 201, 699, 1290
TseFI GTSAC 1 cut(s) 127
TseI GCWGC 3 cut(s) 852, 857, 950
Tsp45I GTSAC 1 cut(s) 127
TspDTI ATGAA 7 cut(s) 352, 815, 834, 960, 1009, 1271, 1315
TspMI CCCGGG 1 cut(s) 509
TspRI CASTG 6 cut(s) 38, 129, 181, 201, 699, 1290
Van91I CCANNNNNTGG 1 cut(s) 1260
VpaK11BI GGWCC 6 cut(s) 535, 628, 699, 707, 1069, 1095
XagI CCTNNNNNAGG 1 cut(s) 57
XapI RAATTY 2 cut(s) 498, 683
XceI RCATGY 1 cut(s) 821
XmaI CCCGGG 1 cut(s) 509
XmiI GTMKAC 1 cut(s) 21
XspI CTAG 1 cut(s) 54
Zsp2I ATGCAT 1 cut(s) 361
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.