Rroxscaffold_7G00213340

UDP-glycosyltransferase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000007
OG0000284
Physical Location & Seq
Forward (+)
63800214 .. 63802635
2422 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_7G00213340.1

Sequence Viewer

Length: 1371 bp
ATGGAGAAAGAACACAGAGCCTACAAATCTCACTGCTTGGTCTTACCCTATCCTAGCCAAGGACATATTAACCCTTTGTTCCAATTCTCTAAGCTGTTAGATCATAAACAAATCAAAGTCACATTGGTCACTACTCGTTTTACCTCCAAGACAATGCACAGAGGATCCAGTGGCATTGAGCTGGAGACAATCTCTGATGGTTACGACGAAGGTGGGACAGACCAGGCAGAAAGTATACAAGCCTATATTGAGAGGTTTTGGCAAGTAGGACCAGAGACATTGGCTGAGCTCTTGGAGAAGCTTTCGAGCTCAGGGTGTCCAGTTAACTGTATTGTTTATGATTCAGTCATGCCTTGGGCTTTGGATGTTGCCAAGAAGTTTGGAATAGTTGGGGCTGCCTTCTTCACTCAGTCTTGTGTTGTTGACAGCATCTACTATCATGTCAACAAAGGGCTACTGAAACTTCCTCTTACTGACTCGGAAATTTCACTTCCCGGGATGCCACCACTCGAGCCTTTGGACCTGCCATCTTTTGTATATGATTTCGGGTCTTACCCAGCTTTCTTTGAAGTTGTTATCGGTCAGTTCTCCACTGTTGACAAAGCCGATTGGGTCTTCTGCAACACATTTTATGAGTTGGAAGAACAAGTGGTGGATTGGATGGCAAAGTTTTGGCCACTGAGGACCATTGGACCAACTATACCATCTAACTATTTGGATAACCGACTTGAAGATGACAAAGTTTATGGCGTTGACCTCTTTAGATCCAACAATGATGCCTGCATGAAATGGTTAAACGAACATCCAAAGAATTCTGTTGCTTACATCTCATTCGGCAGCTTTGCACAACTGGGACTTGAGCAAATGGAGGAACTGGCATGGGGTTTGAGGAGAAGCAAAAGCAAGTTCTTGTGGGTGGTTAGAGAATCAGAAGCAGCTAAAGTCCCCAAAGGGTTTATCGAGGAGACAGCTGAGAAGGGTTTGGTGGTTTCATGGTGCTGCCAACTAGAGGTTTTGGCTCATGAAGCTGTTGGGTGCTTCATTACACATTGTGGTTGGAACTCAACTTTGGAGTCTGTGTGTTTGGGAGTTCCATTAGTGGCAATGCCACAATGGAGTGACCAAAGCACCAATGCCAAGTACATTAGGGATGTGTGGAAAATAGGGGTTAAAGCTCAACCTGATGAGAAAGGCATCGTAAGGCGAGAAGAAGTAGAGCATTGTATAAGTGAAATCATGGAGGGGGAGAGAGGAAAAGAAATACAAAAGAATGCCATGAAATGGAAAGATTTGGCTAGAAAGGCAGTGATTCAAGGCGGAAGTTCCGACAAAAACATTGATGAGTTCATTGCAACGTTGGTTAAGCGTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000302 GO:0001101 GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0006082 GO:0006520 GO:0006725 GO:0006807 GO:0006950 GO:0006970 GO:0006972 GO:0006979 GO:0007154 GO:0007275 GO:0008150 GO:0008152 GO:0008194 GO:0009072 GO:0009414 GO:0009415 GO:0009605 GO:0009628 GO:0009636 GO:0009651 GO:0009653 GO:0009696 GO:0009719 GO:0009725 GO:0009737 GO:0009850 GO:0009987 GO:0009991 GO:0010016 GO:0010029 GO:0010030 GO:0010033 GO:0010035 GO:0010817 GO:0016740 GO:0016757 GO:0016758 GO:0016999 GO:0017144 GO:0018874 GO:0018958 GO:0019752 GO:0031668 GO:0032501 GO:0032502 GO:0032787 GO:0032870 GO:0033554 GO:0033993 GO:0034599 GO:0034614 GO:0034641 GO:0035251 GO:0035690 GO:0042221 GO:0042430 GO:0042445 GO:0042493 GO:0042537 GO:0042538 GO:0042542 GO:0042631 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043436 GO:0044237 GO:0044238 GO:0044281 GO:0044424 GO:0044444 GO:0044464 GO:0046482 GO:0046483 GO:0046527 GO:0046677 GO:0048367 GO:0048518 GO:0048580 GO:0048582 GO:0048731 GO:0048856 GO:0050789 GO:0050793 GO:0050896 GO:0051094 GO:0051239 GO:0051240 GO:0051716 GO:0052638 GO:0052639 GO:0052640 GO:0052641 GO:0065007 GO:0065008 GO:0070301 GO:0070887 GO:0071214 GO:0071215 GO:0071229 GO:0071236 GO:0071310 GO:0071396 GO:0071462 GO:0071470 GO:0071472 GO:0071474 GO:0071475 GO:0071495 GO:0071496 GO:0071704 GO:0080002 GO:0080024 GO:0080043 GO:0080044 GO:0080167 GO:0090704 GO:0097237 GO:0097305 GO:0097306 GO:0104004 GO:1900140 GO:1901360 GO:1901564 GO:1901615 GO:1901700 GO:1901701 GO:2000026
KEGG Pathways
Metabolic & Signaling
ko00380 ko00966 ko01110 ko01210 map00380 map00966 map01110 map01210
Pfam Domains
Protein Families
UDPGT

Protein Analysis

456

Amino Acids

51.57

Weight (kDa)

5.32

Isoelectric Point (pI)

43.68

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
UDPGT PF00201 266 - 428 3.9e-24 UDP-glucoronosyl and UDP-glucosyl transferase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000284)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G05675 AT1G05680
fragaria_vesca FvH4_2g03180 FvH4_2g03250 FvH4_2g03250 FvH4_2g03260 FvH4_2g03280 FvH4_2g03282 FvH4_2g03300 FvH4_2g17430 FvH4_3g07860
malus_domestica MD05G1106600.v1.1 MD10G1111000.v1.1 MD10G1111100.v1.1 MD10G1111300.v1.1 MD15G1305500.v1.1 MD15G1357700.v1.1 MD16G1086200.v1.1
prunus_persica Prupe.1G505100_v2.0.a1 Prupe.1G505200_v2.0.a1 Prupe.6G211600_v2.0.a1 Prupe.8G150600_v2.0.a1 Prupe.8G150700_v2.0.a1 Prupe.8G185900_v2.0.a1 Prupe.8G186000_v2.0.a1 Prupe.8G186100_v2.0.a1 Prupe.8G186200_v2.0.a1 Prupe.I000900_v2.0.a1 Prupe.I001000_v2.0.a1
pyrus_communis pycom10g09600 pycom10g09610 pycom10g09620 pycom15g31960
rosa_chinensis RchiOBHm_Chr6g0248151 RchiOBHm_Chr6g0248201 RchiOBHm_Chr6g0248231 RchiOBHm_Chr6g0248251 RchiOBHm_Chr6g0248261 RchiOBHm_Chr6g0248271 RchiOBHm_Chr6g0248321 RchiOBHm_Chr6g0248331 RchiOBHm_Chr6g0248381 RchiOBHm_Chr6g0248391 RchiOBHm_Chr6g0248401 RchiOBHm_Chr6g0248411 RchiOBHm_Chr6g0248421 RchiOBHm_Chr6g0282101 RchiOBHm_Chr6g0282111
rosa_laevigata RLG00000012908 RLG00000012910 RLG00000015155 RLG00000015156 RLG00000015157 RLG00000015158 RLG00000015159 RLG00000015162
rosa_multiflora Rmu_co8202196.1_g000001 Rmu_co8203792.1_g000001 Rmu_co8228231.1_g000001 Rmu_co8347131.1_g000001 Rmu_sc0000569.1_g000027 Rmu_sc0001700.1_g000052 Rmu_sc0002553.1_g000004 Rmu_sc0002553.1_g000005 Rmu_sc0004210.1_g000002 Rmu_sc0004295.1_g000009 Rmu_sc0004295.1_g000028 Rmu_sc0004295.1_g000034 Rmu_sc0005018.1_g000004 Rmu_sc0005018.1_g000007 Rmu_sc0015195.1_g000002 Rmu_sc0017247.1_g000001 Rmu_sc0041438.1_g000001
rosa_roxburghii Rroxscaffold_7G00186520 Rroxscaffold_7G00186550 Rroxscaffold_7G00213300 Rroxscaffold_7G00213340 Rroxscaffold_7G00213380 Rroxscaffold_7G00213400 Rroxscaffold_7G00213450
rosa_rugosa Rorug05G0530300 Rorug05G0531000 Rorug05G0531100 Rorug05G0552500 Rorug05G0552500 Rorug06G0145500
rosa_samantha Rh2AG004400 Rh6AG045600 Rh6AG045900 Rh6AG046200 Rh6AG046500 Rh6AG046700 Rh6AG258500 Rh6BG041200 Rh6BG041600 Rh6BG041700 Rh6BG041900 Rh6BG042000 Rh6BG042500 Rh6BG043000 Rh6BG043100 Rh6BG043200 Rh6BG043300 Rh6BG043400 Rh6BG261900 Rh6CG038700 Rh6CG038900 Rh6CG039100 Rh6CG039400 Rh6CG039700 Rh6CG039800 Rh6CG039900 Rh6CG040000 Rh6CG040100 Rh6CG260800
rosa_wichuraiana Rw6G003950 Rw6G003970 Rw6G003980 Rw6G004010 Rw6G004050 Rw6G004060 Rw6G004070 Rw6G004080 Rw6G022370 Rw6G022380

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 531
AccB7I CCANNNNNTGG 1 cut(s) 1281
AccI GTMKAC 1 cut(s) 235
AciI CCGC 1 cut(s) 1317
AclI AACGTT 1 cut(s) 1355
AclWI GGATC 3 cut(s) 159, 172, 759
AcoI YGGCCR 1 cut(s) 674
AcsI RAATTY 2 cut(s) 483, 811
AdeI CACNNNGTG 1 cut(s) 1052
AfaI GTAC 1 cut(s) 1142
AfiI CCNNNNNNNGG 3 cut(s) 59, 1009, 1281
AgsI TTSAA 3 cut(s) 569, 731, 1313
AjnI CCWGG 1 cut(s) 222
AjuI GAANNNNNNNTTGG 2 cut(s) 1052, 1084
Alw21I GWGCWC 2 cut(s) 291, 311
Alw26I GTCTC 3 cut(s) 179, 269, 959
AlwI GGATC 3 cut(s) 159, 172, 759
Ama87I CYCGRG 2 cut(s) 494, 509
AoxI GGCC 1 cut(s) 674
ApeKI GCWGC 4 cut(s) 395, 837, 935, 999
ApoI RAATTY 2 cut(s) 483, 811
AspS9I GGNCC 4 cut(s) 269, 520, 684, 692
AsuC2I CCSGG 2 cut(s) 495, 496
AvaI CYCGRG 2 cut(s) 494, 509
AvaII GGWCC 4 cut(s) 269, 520, 684, 692
BalI TGGCCA 1 cut(s) 676
BamHI GGATCC 1 cut(s) 164
BanII GRGCYC 2 cut(s) 291, 311
BbsI GAAGAC 1 cut(s) 607
Bbv12I GWGCWC 2 cut(s) 291, 311
BbvI GCAGC 4 cut(s) 382, 849, 947, 986
BccI CCATC 4 cut(s) 191, 535, 655, 712
BciT130I CCWGG 1 cut(s) 224
BcnI CCSGG 2 cut(s) 495, 496
BcoDI GTCTC 3 cut(s) 179, 269, 959
BfaI CTAG 3 cut(s) 54, 1007, 1296
BfuAI ACCTGC 1 cut(s) 531
BisI GCNGC 4 cut(s) 396, 838, 936, 1000
BlpI GCTNAGC 1 cut(s) 285
BlsI GCNGC 4 cut(s) 397, 839, 937, 1001
Bme1390I CCNGG 3 cut(s) 224, 495, 496
Bme18I GGWCC 4 cut(s) 269, 520, 684, 692
BmeT110I CYCGRG 2 cut(s) 494, 509
BmgT120I GGNCC 4 cut(s) 269, 520, 684, 692
BmiI GGNNCC 1 cut(s) 166
BmrFI CCNGG 3 cut(s) 224, 495, 496
BmrI ACTGGG 1 cut(s) 860
BmsI GCATC 4 cut(s) 438, 489, 766, 1203
BmuI ACTGGG 1 cut(s) 860
BpiI GAAGAC 1 cut(s) 607
BplI GAGNNNNNCTC 2 cut(s) 176, 208
BpmI CTGGAG 1 cut(s) 203
Bpu10I CCTNAGC 1 cut(s) 310
Bpu1102I GCTNAGC 1 cut(s) 285
BpuEI CTTGAG 1 cut(s) 878
BpuMI CCSGG 2 cut(s) 495, 496
BsaJI CCNNGG 3 cut(s) 58, 353, 494
BsaXI ACNNNNNCTCC 2 cut(s) 1064, 1094
Bsc4I CCNNNNNNNGG 3 cut(s) 59, 1009, 1281
Bse1I ACTGG 4 cut(s) 168, 320, 855, 879
Bse3DI GCAATG 2 cut(s) 1110, 1347
BseBI CCWGG 1 cut(s) 224
BseDI CCNNGG 3 cut(s) 58, 353, 494
BseGI GGATG 5 cut(s) 370, 504, 666, 802, 1156
BseLI CCNNNNNNNGG 3 cut(s) 59, 1009, 1281
BseMI GCAATG 2 cut(s) 1110, 1347
BseMII CTCAG 5 cut(s) 276, 324, 422, 671, 963
BseNI ACTGG 4 cut(s) 168, 320, 855, 879
BseRI GAGGAG 2 cut(s) 904, 977
BseXI GCAGC 4 cut(s) 382, 849, 947, 986
BseYI CCCAGC 1 cut(s) 556
BshFI GGCC 1 cut(s) 676
BsiHKAI GWGCWC 2 cut(s) 291, 311
BsiHKCI CYCGRG 2 cut(s) 494, 509
BsiSI CCGG 1 cut(s) 495
BslFI GGGAC 3 cut(s) 229, 867, 929
BslI CCNNNNNNNGG 3 cut(s) 59, 1009, 1281
BsmAI GTCTC 3 cut(s) 179, 269, 959
BsmFI GGGAC 3 cut(s) 229, 867, 929
BsmI GAATGC 1 cut(s) 1276
BsnI GGCC 1 cut(s) 676
BsoBI CYCGRG 2 cut(s) 494, 509
Bsp1286I GDGCHC 2 cut(s) 291, 311
Bsp143I GATC 3 cut(s) 100, 164, 764
Bsp1720I GCTNAGC 1 cut(s) 285
BspACI CCGC 1 cut(s) 1317
BspANI GGCC 1 cut(s) 676
BspCNI CTCAG 5 cut(s) 277, 323, 421, 672, 964
BspHI TCATGA 1 cut(s) 1021
BspLI GGNNCC 1 cut(s) 166
BspMI ACCTGC 1 cut(s) 531
BspPI GGATC 3 cut(s) 159, 172, 759
BsrDI GCAATG 2 cut(s) 1110, 1347
BsrI ACTGG 4 cut(s) 168, 320, 855, 879
BssECI CCNNGG 3 cut(s) 58, 353, 494
BssMI GATC 3 cut(s) 100, 164, 764
BssNAI GTATAC 1 cut(s) 236
BssT1I CCWWGG 2 cut(s) 58, 353
Bst1107I GTATAC 1 cut(s) 236
Bst2UI CCWGG 1 cut(s) 224
Bst4CI ACNGT 2 cut(s) 329, 595
BstC8I GCNNGC 1 cut(s) 781
BstDEI CTNAG 6 cut(s) 90, 285, 310, 408, 680, 972
BstENI CCTNNNNNAGG 1 cut(s) 57
BstF5I GGATG 5 cut(s) 370, 504, 666, 802, 1156
BstKTI GATC 3 cut(s) 103, 167, 767
BstMAI GTCTC 3 cut(s) 179, 269, 959
BstMBI GATC 3 cut(s) 100, 164, 764
BstMWI GCNNNNNNNGC 2 cut(s) 1025, 1301
BstNI CCWGG 1 cut(s) 224
BstSCI CCNGG 3 cut(s) 222, 493, 494
BstV1I GCAGC 4 cut(s) 382, 849, 947, 986
BstV2I GAAGAC 1 cut(s) 607
BstX2I RGATCY 2 cut(s) 164, 764
BstYI RGATCY 2 cut(s) 164, 764
BstZ17I GTATAC 1 cut(s) 236
BsuRI GGCC 1 cut(s) 676
BtsCI GGATG 5 cut(s) 370, 504, 666, 802, 1156
BtsI GCAGTG 2 cut(s) 31, 1311
BtsIMutI CAGTG 5 cut(s) 31, 175, 591, 677, 1311
BveI ACCTGC 1 cut(s) 531
Cac8I GCNNGC 1 cut(s) 781
CciI TCATGA 1 cut(s) 1021
Cfr13I GGNCC 4 cut(s) 269, 520, 684, 692
Cfr9I CCCGGG 1 cut(s) 494
Csp6I GTAC 1 cut(s) 1141
CviAII CATG 8 cut(s) 349, 440, 784, 879, 993, 1022, 1237, 1276
CviQI GTAC 1 cut(s) 1141
DdeI CTNAG 6 cut(s) 90, 285, 310, 408, 680, 972
DpnI GATC 3 cut(s) 102, 166, 766
DpnII GATC 3 cut(s) 100, 164, 764
DraIII CACNNNGTG 1 cut(s) 1052
EaeI YGGCCR 1 cut(s) 674
EciI GGCGGA 1 cut(s) 1332
Ecl136II GAGCTC 2 cut(s) 289, 309
Eco130I CCWWGG 2 cut(s) 58, 353
Eco24I GRGCYC 2 cut(s) 291, 311
Eco47I GGWCC 4 cut(s) 269, 520, 684, 692
Eco53kI GAGCTC 2 cut(s) 289, 309
Eco88I CYCGRG 2 cut(s) 494, 509
EcoICRI GAGCTC 2 cut(s) 289, 309
EcoNI CCTNNNNNAGG 1 cut(s) 57
EcoRI GAATTC 1 cut(s) 811
EcoRII CCWGG 1 cut(s) 222
EcoT14I CCWWGG 2 cut(s) 58, 353
EcoT38I GRGCYC 2 cut(s) 291, 311
ErhI CCWWGG 2 cut(s) 58, 353
FaeI CATG 8 cut(s) 352, 443, 787, 882, 996, 1025, 1240, 1279
FaqI GGGAC 3 cut(s) 229, 867, 929
FatI CATG 8 cut(s) 348, 439, 783, 878, 992, 1021, 1236, 1275
FblI GTMKAC 1 cut(s) 235
Fnu4HI GCNGC 4 cut(s) 396, 838, 936, 1000
FokI GGATG 5 cut(s) 377, 511, 673, 789, 1163
FriOI GRGCYC 2 cut(s) 291, 311
Fsp4HI GCNGC 4 cut(s) 396, 838, 936, 1000
FspBI CTAG 3 cut(s) 54, 1007, 1296
GluI GCNGC 4 cut(s) 396, 838, 936, 1000
GsaI CCCAGC 1 cut(s) 560
GsuI CTGGAG 1 cut(s) 203
HaeIII GGCC 1 cut(s) 676
HapII CCGG 1 cut(s) 495
Hin1II CATG 8 cut(s) 352, 443, 787, 882, 996, 1025, 1240, 1279
HincII GTYRAC 5 cut(s) 325, 424, 445, 598, 754
HindII GTYRAC 5 cut(s) 325, 424, 445, 598, 754
HindIII AAGCTT 1 cut(s) 299
HinfI GANTC 5 cut(s) 341, 476, 926, 1073, 1309
HpaI GTTAAC 1 cut(s) 325
HpaII CCGG 1 cut(s) 495
Hpy166II GTNNAC 6 cut(s) 236, 325, 424, 445, 598, 754
Hpy188I TCNGA 4 cut(s) 196, 481, 931, 1327
Hpy188III TCNNGA 1 cut(s) 1022
Hpy8I GTNNAC 6 cut(s) 236, 325, 424, 445, 598, 754
Hpy99I CGWCG 1 cut(s) 209
HpyAV CCTTC 3 cut(s) 203, 409, 970
HpyCH4III ACNGT 2 cut(s) 329, 595
HpyCH4IV ACGT 1 cut(s) 1355
HpyCH4V TGCA 5 cut(s) 157, 621, 783, 845, 1352
HpyF10VI GCNNNNNNNGC 2 cut(s) 1025, 1301
HpyF3I CTNAG 6 cut(s) 90, 285, 310, 408, 680, 972
HpySE526I ACGT 1 cut(s) 1355
Hsp92II CATG 8 cut(s) 352, 443, 787, 882, 996, 1025, 1240, 1279
KspAI GTTAAC 1 cut(s) 325
Kzo9I GATC 3 cut(s) 100, 164, 764
Lsp1109I GCAGC 4 cut(s) 382, 849, 947, 986
LweI GCATC 4 cut(s) 438, 489, 766, 1203
MaeI CTAG 3 cut(s) 54, 1007, 1296
MaeII ACGT 1 cut(s) 1355
MaeIII GTNAC 4 cut(s) 118, 127, 200, 1118
MalI GATC 3 cut(s) 102, 166, 766
MboI GATC 3 cut(s) 100, 164, 764
MboII GAAGA 5 cut(s) 394, 607, 653, 743, 1220
MflI RGATCY 2 cut(s) 164, 764
MhlI GDGCHC 2 cut(s) 291, 311
MlsI TGGCCA 1 cut(s) 676
MluCI AATT 3 cut(s) 83, 483, 811
MluNI TGGCCA 1 cut(s) 676
MlyI GAGTC 2 cut(s) 470, 1082
MmeI TCCRAC 4 cut(s) 618, 792, 1037, 1350
Mox20I TGGCCA 1 cut(s) 676
MscI TGGCCA 1 cut(s) 676
MseI TTAA 6 cut(s) 69, 324, 794, 1170, 1362, 1369
Msp20I TGGCCA 1 cut(s) 676
MspA1I CMGCKG 1 cut(s) 971
MspI CCGG 1 cut(s) 495
MspR9I CCNGG 3 cut(s) 224, 495, 496
Mva1269I GAATGC 1 cut(s) 1276
MvaI CCWGG 1 cut(s) 224
MwoI GCNNNNNNNGC 2 cut(s) 1025, 1301
NciI CCSGG 2 cut(s) 495, 496
NdeII GATC 3 cut(s) 100, 164, 764
NlaIII CATG 8 cut(s) 352, 443, 787, 882, 996, 1025, 1240, 1279
NlaIV GGNNCC 1 cut(s) 166
NmuCI GTSAC 3 cut(s) 118, 127, 1118
PaeR7I CTCGAG 1 cut(s) 509
PagI TCATGA 1 cut(s) 1021
PctI GAATGC 1 cut(s) 1276
PfeI GAWTC 3 cut(s) 341, 926, 1309
PflMI CCANNNNNTGG 1 cut(s) 1281
PkrI GCNGC 4 cut(s) 397, 839, 937, 1001
PleI GAGTC 2 cut(s) 470, 1081
PpsI GAGTC 2 cut(s) 470, 1081
Psp124BI GAGCTC 2 cut(s) 291, 311
Psp1406I AACGTT 1 cut(s) 1355
Psp6I CCWGG 1 cut(s) 222
PspFI CCCAGC 1 cut(s) 556
PspGI CCWGG 1 cut(s) 222
PspN4I GGNNCC 1 cut(s) 166
PspPI GGNCC 4 cut(s) 269, 520, 684, 692
PspXI VCTCGAGB 1 cut(s) 509
PsuI RGATCY 2 cut(s) 164, 764
PvuII CAGCTG 1 cut(s) 971
RsaI GTAC 1 cut(s) 1142
RsaNI GTAC 1 cut(s) 1141
SacI GAGCTC 2 cut(s) 291, 311
SaqAI TTAA 6 cut(s) 69, 324, 794, 1170, 1362, 1369
SatI GCNGC 4 cut(s) 396, 838, 936, 1000
Sau3AI GATC 3 cut(s) 100, 164, 764
Sau96I GGNCC 4 cut(s) 269, 520, 684, 692
SchI GAGTC 2 cut(s) 470, 1082
ScrFI CCNGG 3 cut(s) 224, 495, 496
SduI GDGCHC 2 cut(s) 291, 311
SfaNI GCATC 4 cut(s) 438, 489, 766, 1203
Sfr274I CTCGAG 1 cut(s) 509
SinI GGWCC 4 cut(s) 269, 520, 684, 692
SlaI CTCGAG 1 cut(s) 509
SmaI CCCGGG 1 cut(s) 496
SmlI CTYRAG 2 cut(s) 509, 857
SmoI CTYRAG 2 cut(s) 509, 857
Sse9I AATT 3 cut(s) 83, 483, 811
SsiI CCGC 1 cut(s) 1317
SspMI CTAG 3 cut(s) 54, 1007, 1296
SstI GAGCTC 2 cut(s) 291, 311
StyD4I CCNGG 3 cut(s) 222, 493, 494
StyI CCWWGG 2 cut(s) 58, 353
TaaI ACNGT 2 cut(s) 329, 595
TaiI ACGT 1 cut(s) 1358
TaqI TCGA 3 cut(s) 305, 510, 960
TaqII GACCGA 1 cut(s) 569
TasI AATT 3 cut(s) 83, 483, 811
TatI WGTACW 1 cut(s) 1140
TfiI GAWTC 3 cut(s) 341, 926, 1309
Tru1I TTAA 6 cut(s) 69, 324, 794, 1170, 1362, 1369
Tru9I TTAA 6 cut(s) 69, 324, 794, 1170, 1362, 1369
TscAI CASTG 5 cut(s) 38, 175, 598, 684, 1311
TseFI GTSAC 3 cut(s) 118, 127, 1118
TseI GCWGC 4 cut(s) 395, 837, 935, 999
Tsp45I GTSAC 3 cut(s) 118, 127, 1118
TspDTI ATGAA 6 cut(s) 800, 981, 1030, 1038, 1292, 1336
TspMI CCCGGG 1 cut(s) 494
TspRI CASTG 5 cut(s) 38, 175, 598, 684, 1311
Van91I CCANNNNNTGG 1 cut(s) 1281
VpaK11BI GGWCC 4 cut(s) 269, 520, 684, 692
XagI CCTNNNNNAGG 1 cut(s) 57
XapI RAATTY 2 cut(s) 483, 811
XhoI CTCGAG 1 cut(s) 509
XmaI CCCGGG 1 cut(s) 494
XmiI GTMKAC 1 cut(s) 235
XspI CTAG 3 cut(s) 54, 1007, 1296
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.