MD11G1151400.v1.1

Belongs to the peptidase S10 family

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr11
Physical Location & Seq
Forward (+)
14401637 .. 14408452
6816 bp
Loading structure...
UTR
Exon/CDS
Intron
MD11G1151400.v1.1.491

Sequence Viewer

Length: 1389 bp
ATGGAAAAGCTTTCTGTAATACTTTCCGTCTCTCTTCTCCTTTTTGTACCACTTTTTCATGGAGGAACTGCAAAAACAGCGGCTGCTGCAGGAACCATAGATGGATCAGAGGAGTGGGGCTATGTTGAAGTCAGACCCAAAGCCCACATGTTCTGGTGGCTCTACAGAAGTCCCAACAGAGTTGAGGATCCCTCCAAGCCATGGCCAACCATTCTCTGGCTTCAGGGTGGACCTGGAGGTTCAGGAGTGGGGATTGGGAATTTTCAAGAGATTGGACCATTGGACACAAATTTGAACCCAAGAAACTCAACCTGGTTGCAAAAAGCAGATCTTTTATTTGTTGACAACCCTGTTGGGACTGGATACAGTTTTGTGGAAGACACATCTCTGTTTGTGAAAAATGATTTGGAGGCAGCTGCTGATTTGACAACATTGCTGGTGGAGCTTTTCAACAGAAATGAGAGCCTCCAAAAGAGTCCTTTGTTCATTGTGGCAGAGTCCTATGGAGGCAAGTTTGCAGTCACTCTTGGACTTTCAGCTCTCAAAGCCATTCAACAAGGAAAGCTAAAACTTAGACTTGGAGGAGTGGCATTGGGAGACAGTTGGATCTCTCCGGAAGATTTTGTGCTTTCTTGGGGTCCTCTGCTCAAAGACGTGTCAAGGCTTGACGACAAGGGATTACAGGAATCAAATAATGTGGCTCAAAGAATTAAGCAACAGATTCAGGATGGTCAGTTAGTGGACGCAACCAATTCATGGAGGGAGCTTGAGCAAGTCATCATGTCTAGCAGCAATGCTGTGGATTTCTATAATTTTCTGTTGGATTCAGGAATGGATCCAGTTTCATCCTTGGCATCAATTCGCTATAACCAAGGAATCGAAAAATATTCAATATACCTAACTTCTTTAAGGTCTTCAGCAGGTGGCGGTAAAGGTGATCTTGGTTCTTTGTTAAATGGTGTCATTAAAAAGAAGCTTGAGATAATCCCAGATAATGTGACATGGGGAGGGCAGTCTCATAACGTCTTCCCAGCCATGGCAGGCGATTTTATGAACCCAAGGATTCATGAGGTTGATGAACTCCTTGCTAAAGGGGTCAATGTCACAATATACAATGGGCAAGTTGATCTCATATGTGCAACCAAGGGGACTGAAGCATGGGTTGAAAAGCTCAATTGGGAAGGACTCCCACATTTCTTGAACAAGAGTAGAACCCCTCTTTATTGTGGCCAAGAAGGAATTACAAGAGGGTTCACCAGGTCGCACAAAAACCTGCACTTTTATTGGATTCTTGGAGCAGGACATTTTGTACCTGTGGATCAGCCATGCATTGCATTGAACATGGTGGCCGACATCACGCAATCACCTGCTCCTGCTGCTTCTACGTAG

Protein Analysis

463

Amino Acids

50.57

Weight (kDa)

5.47

Isoelectric Point (pI)

32.35

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Peptidase_S10 PF00450 33 - 452 3.5e-76 Serine carboxypeptidase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 2 cut(s) 911, 1375
Acc36I ACCTGC 3 cut(s) 911, 1281, 1375
AccB7I CCANNNNNTGG 3 cut(s) 201, 216, 756
AccIII TCCGGA 1 cut(s) 613
AciI CCGC 2 cut(s) 80, 927
AclWI GGATC 7 cut(s) 112, 182, 195, 614, 830, 843, 1326
AcoI YGGCCR 3 cut(s) 203, 1228, 1347
AcsI RAATTY 2 cut(s) 259, 289
AcuI CTGAAG 3 cut(s) 206, 900, 1173
AfaI GTAC 2 cut(s) 48, 1311
AfiI CCNNNNNNNGG 4 cut(s) 201, 216, 756, 1036
AflIII ACRYGT 2 cut(s) 147, 654
AgsI TTSAA 9 cut(s) 128, 266, 295, 451, 554, 891, 1166, 1201, 1339
AjiI CACGTC 1 cut(s) 655
AjnI CCWGG 3 cut(s) 232, 311, 1256
AjuI GAANNNNNNNTTGG 2 cut(s) 389, 421
AluBI AGCT 8 cut(s) 10, 416, 445, 539, 565, 766, 976, 1171
AluI AGCT 8 cut(s) 10, 416, 445, 539, 565, 766, 976, 1171
Alw26I GTCTC 3 cut(s) 34, 591, 1020
AlwI GGATC 7 cut(s) 112, 182, 195, 614, 830, 843, 1326
AlwNI CAGNNNCTG 2 cut(s) 83, 419
Aor13HI TCCGGA 1 cut(s) 613
AoxI GGCC 3 cut(s) 203, 1228, 1347
ApeKI GCWGC 6 cut(s) 83, 86, 413, 416, 789, 1376
ApoI RAATTY 2 cut(s) 259, 289
AspS9I GGNCC 3 cut(s) 230, 275, 638
AsuHPI GGTGA 3 cut(s) 947, 1246, 1356
AvaII GGWCC 3 cut(s) 230, 275, 638
BalI TGGCCA 2 cut(s) 205, 1230
BamHI GGATCC 2 cut(s) 187, 835
BbsI GAAGAC 3 cut(s) 384, 906, 1018
BbvI GCAGC 6 cut(s) 70, 73, 403, 425, 801, 1363
BccI CCATC 2 cut(s) 95, 722
BciT130I CCWGG 3 cut(s) 234, 313, 1258
BciVI GTATCC 1 cut(s) 356
BcoDI GTCTC 3 cut(s) 34, 591, 1020
BfaI CTAG 1 cut(s) 786
BfmI CTRYAG 2 cut(s) 87, 163
BfuAI ACCTGC 3 cut(s) 911, 1281, 1375
BfuI GTATCC 1 cut(s) 356
BglII AGATCT 1 cut(s) 328
BisI GCNGC 7 cut(s) 81, 84, 87, 414, 417, 790, 1377
BlsI GCNGC 7 cut(s) 82, 85, 88, 415, 418, 791, 1378
Bme1390I CCNGG 3 cut(s) 234, 313, 1258
Bme18I GGWCC 3 cut(s) 230, 275, 638
BmgBI CACGTC 1 cut(s) 655
BmgT120I GGNCC 3 cut(s) 230, 275, 638
BmiI GGNNCC 4 cut(s) 94, 189, 639, 837
BmrFI CCNGG 3 cut(s) 234, 313, 1258
BmsI GCATC 1 cut(s) 863
BpiI GAAGAC 3 cut(s) 384, 906, 1018
BplI GAGNNNNNCTC 2 cut(s) 176, 208
BpmI CTGGAG 1 cut(s) 255
BpuEI CTTGAG 2 cut(s) 788, 998
BsaAI YACGTR 1 cut(s) 1386
BsaJI CCNNGG 6 cut(s) 200, 849, 871, 1035, 1058, 1143
BsaWI WCCGGW 1 cut(s) 613
Bsc4I CCNNNNNNNGG 4 cut(s) 201, 216, 756, 1036
Bse1I ACTGG 2 cut(s) 364, 839
Bse3DI GCAATG 3 cut(s) 431, 799, 1329
BseAI TCCGGA 1 cut(s) 613
BseBI CCWGG 3 cut(s) 234, 313, 1258
BseDI CCNNGG 6 cut(s) 200, 849, 871, 1035, 1058, 1143
BseGI GGATG 2 cut(s) 733, 845
BseLI CCNNNNNNNGG 4 cut(s) 201, 216, 756, 1036
BseMI GCAATG 3 cut(s) 431, 799, 1329
BseNI ACTGG 2 cut(s) 364, 839
BseRI GAGGAG 2 cut(s) 125, 597
BseXI GCAGC 6 cut(s) 70, 73, 403, 425, 801, 1363
BseYI CCCAGC 1 cut(s) 1030
BsgI GTGCAG 1 cut(s) 1259
BshFI GGCC 3 cut(s) 205, 1230, 1349
BsiSI CCGG 1 cut(s) 614
BslFI GGGAC 3 cut(s) 156, 370, 1162
BslI CCNNNNNNNGG 4 cut(s) 201, 216, 756, 1036
BsmAI GTCTC 3 cut(s) 34, 591, 1020
BsmBI CGTCTC 1 cut(s) 34
BsmFI GGGAC 3 cut(s) 156, 370, 1162
BsnI GGCC 3 cut(s) 205, 1230, 1349
Bsp13I TCCGGA 1 cut(s) 613
Bsp143I GATC 8 cut(s) 104, 187, 328, 606, 835, 937, 1126, 1318
Bsp19I CCATGG 2 cut(s) 200, 1035
BspACI CCGC 2 cut(s) 80, 927
BspANI GGCC 3 cut(s) 205, 1230, 1349
BspEI TCCGGA 1 cut(s) 613
BspHI TCATGA 1 cut(s) 1066
BspLI GGNNCC 4 cut(s) 94, 189, 639, 837
BspMAI CTGCAG 1 cut(s) 91
BspMI ACCTGC 3 cut(s) 911, 1281, 1375
BspPI GGATC 7 cut(s) 112, 182, 195, 614, 830, 843, 1326
BsrDI GCAATG 3 cut(s) 431, 799, 1329
BsrI ACTGG 2 cut(s) 364, 839
BssECI CCNNGG 6 cut(s) 200, 849, 871, 1035, 1058, 1143
BssMI GATC 8 cut(s) 104, 187, 328, 606, 835, 937, 1126, 1318
BssT1I CCWWGG 6 cut(s) 200, 849, 871, 1035, 1058, 1143
Bst2UI CCWGG 3 cut(s) 234, 313, 1258
Bst4CI ACNGT 2 cut(s) 368, 602
Bst6I CTCTTC 1 cut(s) 39
BstBAI YACGTR 1 cut(s) 1386
BstC8I GCNNGC 1 cut(s) 1042
BstDEI CTNAG 1 cut(s) 572
BstDSI CCRYGG 2 cut(s) 200, 1035
BstF5I GGATG 2 cut(s) 733, 845
BstKTI GATC 8 cut(s) 107, 190, 331, 609, 838, 940, 1129, 1321
BstMAI GTCTC 3 cut(s) 34, 591, 1020
BstMBI GATC 8 cut(s) 104, 187, 328, 606, 835, 937, 1126, 1318
BstMWI GCNNNNNNNGC 5 cut(s) 77, 86, 442, 545, 1376
BstNI CCWGG 3 cut(s) 234, 313, 1258
BstNSI RCATGY 1 cut(s) 151
BstSCI CCNGG 3 cut(s) 232, 311, 1256
BstSFI CTRYAG 2 cut(s) 87, 163
BstSNI TACGTA 1 cut(s) 1386
BstV1I GCAGC 6 cut(s) 70, 73, 403, 425, 801, 1363
BstV2I GAAGAC 3 cut(s) 384, 906, 1018
BstX2I RGATCY 4 cut(s) 187, 328, 606, 835
BstYI RGATCY 4 cut(s) 187, 328, 606, 835
BsuI GTATCC 1 cut(s) 356
BsuRI GGCC 3 cut(s) 205, 1230, 1349
BtgI CCRYGG 2 cut(s) 200, 1035
BtrI CACGTC 1 cut(s) 655
BtsCI GGATG 2 cut(s) 733, 845
BveI ACCTGC 3 cut(s) 911, 1281, 1375
Cac8I GCNNGC 1 cut(s) 1042
CaiI CAGNNNCTG 2 cut(s) 83, 419
CciI TCATGA 1 cut(s) 1066
Cfr13I GGNCC 3 cut(s) 230, 275, 638
CseI GACGC 1 cut(s) 752
CsiI ACCWGGT 2 cut(s) 311, 1256
Csp6I GTAC 2 cut(s) 47, 1310
CspCI CAANNNNNGTGG 4 cut(s) 678, 713, 1179, 1214
CviQI GTAC 2 cut(s) 47, 1310
DdeI CTNAG 1 cut(s) 572
DpnI GATC 8 cut(s) 106, 189, 330, 608, 837, 939, 1128, 1320
DpnII GATC 8 cut(s) 104, 187, 328, 606, 835, 937, 1126, 1318
EaeI YGGCCR 3 cut(s) 203, 1228, 1347
Eam1104I CTCTTC 1 cut(s) 39
EarI CTCTTC 1 cut(s) 39
Eco105I TACGTA 1 cut(s) 1386
Eco130I CCWWGG 6 cut(s) 200, 849, 871, 1035, 1058, 1143
Eco47I GGWCC 3 cut(s) 230, 275, 638
Eco57I CTGAAG 3 cut(s) 206, 900, 1173
EcoO109I RGGNCCY 1 cut(s) 638
EcoRII CCWGG 3 cut(s) 232, 311, 1256
EcoT14I CCWWGG 6 cut(s) 200, 849, 871, 1035, 1058, 1143
EcoT22I ATGCAT 1 cut(s) 1331
ErhI CCWWGG 6 cut(s) 200, 849, 871, 1035, 1058, 1143
Esp3I CGTCTC 1 cut(s) 34
FalI AAGNNNNNCTT 4 cut(s) 315, 347, 924, 956
FaqI GGGAC 3 cut(s) 156, 370, 1162
FauNDI CATATG 1 cut(s) 1133
Fnu4HI GCNGC 7 cut(s) 81, 84, 87, 414, 417, 790, 1377
FokI GGATG 2 cut(s) 740, 832
Fsp4HI GCNGC 7 cut(s) 81, 84, 87, 414, 417, 790, 1377
FspBI CTAG 1 cut(s) 786
GluI GCNGC 7 cut(s) 81, 84, 87, 414, 417, 790, 1377
GsaI CCCAGC 1 cut(s) 1034
GsuI CTGGAG 1 cut(s) 255
HaeIII GGCC 3 cut(s) 205, 1230, 1349
HapII CCGG 1 cut(s) 614
HgaI GACGC 1 cut(s) 752
HincII GTYRAC 1 cut(s) 343
HindII GTYRAC 1 cut(s) 343
HindIII AAGCTT 2 cut(s) 8, 974
HinfI GANTC 9 cut(s) 475, 497, 686, 721, 824, 876, 1063, 1185, 1288
HpaII CCGG 1 cut(s) 614
HphI GGTGA 3 cut(s) 947, 1246, 1356
Hpy166II GTNNAC 4 cut(s) 230, 343, 742, 1254
Hpy188I TCNGA 2 cut(s) 109, 134
Hpy188III TCNNGA 7 cut(s) 243, 266, 614, 725, 828, 1067, 1198
Hpy8I GTNNAC 4 cut(s) 230, 343, 742, 1254
HpyAV CCTTC 2 cut(s) 1175, 1229
HpyCH4III ACNGT 2 cut(s) 368, 602
HpyCH4IV ACGT 3 cut(s) 654, 1023, 1385
HpyCH4V TGCA 8 cut(s) 71, 89, 319, 518, 1139, 1276, 1329, 1334
HpyF10VI GCNNNNNNNGC 5 cut(s) 77, 86, 442, 545, 1376
HpyF3I CTNAG 1 cut(s) 572
HpySE526I ACGT 3 cut(s) 654, 1023, 1385
Kpn2I TCCGGA 1 cut(s) 613
Kzo9I GATC 8 cut(s) 104, 187, 328, 606, 835, 937, 1126, 1318
LmnI GCTCC 4 cut(s) 442, 763, 1295, 1375
Lsp1109I GCAGC 6 cut(s) 70, 73, 403, 425, 801, 1363
LweI GCATC 1 cut(s) 863
MabI ACCWGGT 2 cut(s) 311, 1256
MaeI CTAG 1 cut(s) 786
MaeII ACGT 3 cut(s) 654, 1023, 1385
MaeIII GTNAC 3 cut(s) 520, 997, 1102
MalI GATC 8 cut(s) 106, 189, 330, 608, 837, 939, 1128, 1320
MboI GATC 8 cut(s) 104, 187, 328, 606, 835, 937, 1126, 1318
MboII GAAGA 5 cut(s) 26, 389, 629, 906, 1018
MfeI CAATTG 1 cut(s) 1174
MflI RGATCY 4 cut(s) 187, 328, 606, 835
MlsI TGGCCA 2 cut(s) 205, 1230
MluCI AATT 8 cut(s) 259, 289, 708, 751, 811, 858, 1174, 1239
MluNI TGGCCA 2 cut(s) 205, 1230
MlyI GAGTC 3 cut(s) 484, 506, 1179
MmeI TCCRAC 2 cut(s) 584, 801
Mox20I TGGCCA 2 cut(s) 205, 1230
Mph1103I ATGCAT 1 cut(s) 1331
MroI TCCGGA 1 cut(s) 613
MscI TGGCCA 2 cut(s) 205, 1230
MseI TTAA 4 cut(s) 711, 908, 953, 966
Msp20I TGGCCA 2 cut(s) 205, 1230
MspA1I CMGCKG 2 cut(s) 80, 416
MspI CCGG 1 cut(s) 614
MspR9I CCNGG 3 cut(s) 234, 313, 1258
MunI CAATTG 1 cut(s) 1174
MvaI CCWGG 3 cut(s) 234, 313, 1258
MwoI GCNNNNNNNGC 5 cut(s) 77, 86, 442, 545, 1376
NcoI CCATGG 2 cut(s) 200, 1035
NdeI CATATG 1 cut(s) 1133
NdeII GATC 8 cut(s) 104, 187, 328, 606, 835, 937, 1126, 1318
NlaIV GGNNCC 4 cut(s) 94, 189, 639, 837
NmuCI GTSAC 3 cut(s) 520, 997, 1102
NsiI ATGCAT 1 cut(s) 1331
NspI RCATGY 1 cut(s) 151
PagI TCATGA 1 cut(s) 1066
PaqCI CACCTGC 2 cut(s) 911, 1375
PciI ACATGT 1 cut(s) 147
PfeI GAWTC 6 cut(s) 686, 721, 824, 876, 1063, 1288
PflMI CCANNNNNTGG 3 cut(s) 201, 216, 756
PkrI GCNGC 7 cut(s) 82, 85, 88, 415, 418, 791, 1378
PleI GAGTC 3 cut(s) 483, 505, 1179
PpsI GAGTC 3 cut(s) 483, 505, 1179
Ppu21I YACGTR 1 cut(s) 1386
PpuMI RGGWCCY 1 cut(s) 638
PscI ACATGT 1 cut(s) 147
Psp5II RGGWCCY 1 cut(s) 638
Psp6I CCWGG 3 cut(s) 232, 311, 1256
PspFI CCCAGC 1 cut(s) 1030
PspGI CCWGG 3 cut(s) 232, 311, 1256
PspN4I GGNNCC 4 cut(s) 94, 189, 639, 837
PspPI GGNCC 3 cut(s) 230, 275, 638
PspPPI RGGWCCY 1 cut(s) 638
PstI CTGCAG 1 cut(s) 91
PstNI CAGNNNCTG 2 cut(s) 83, 419
PsuI RGATCY 4 cut(s) 187, 328, 606, 835
PvuII CAGCTG 1 cut(s) 416
RsaI GTAC 2 cut(s) 48, 1311
RsaNI GTAC 2 cut(s) 47, 1310
SaqAI TTAA 4 cut(s) 711, 908, 953, 966
SatI GCNGC 7 cut(s) 81, 84, 87, 414, 417, 790, 1377
Sau3AI GATC 8 cut(s) 104, 187, 328, 606, 835, 937, 1126, 1318
Sau96I GGNCC 3 cut(s) 230, 275, 638
SchI GAGTC 3 cut(s) 484, 506, 1179
ScrFI CCNGG 3 cut(s) 234, 313, 1258
SexAI ACCWGGT 2 cut(s) 311, 1256
SfaNI GCATC 1 cut(s) 863
SfcI CTRYAG 2 cut(s) 87, 163
SinI GGWCC 3 cut(s) 230, 275, 638
SmlI CTYRAG 2 cut(s) 767, 977
SmoI CTYRAG 2 cut(s) 767, 977
SnaBI TACGTA 1 cut(s) 1386
Sse9I AATT 8 cut(s) 259, 289, 708, 751, 811, 858, 1174, 1239
SsiI CCGC 2 cut(s) 80, 927
SspI AATATT 1 cut(s) 887
SspMI CTAG 1 cut(s) 786
StyD4I CCNGG 3 cut(s) 232, 311, 1256
StyI CCWWGG 6 cut(s) 200, 849, 871, 1035, 1058, 1143
TaaI ACNGT 2 cut(s) 368, 602
TaiI ACGT 3 cut(s) 657, 1026, 1388
TaqI TCGA 1 cut(s) 879
TasI AATT 8 cut(s) 259, 289, 708, 751, 811, 858, 1174, 1239
TauI GCSGC 1 cut(s) 83
TfiI GAWTC 6 cut(s) 686, 721, 824, 876, 1063, 1288
Tru1I TTAA 4 cut(s) 711, 908, 953, 966
Tru9I TTAA 4 cut(s) 711, 908, 953, 966
TseFI GTSAC 3 cut(s) 520, 997, 1102
TseI GCWGC 6 cut(s) 83, 86, 413, 416, 789, 1376
Tsp45I GTSAC 3 cut(s) 520, 997, 1102
TspDTI ATGAA 7 cut(s) 47, 475, 744, 834, 1055, 1067, 1092
TspGWI ACGGA 1 cut(s) 16
Van91I CCANNNNNTGG 3 cut(s) 201, 216, 756
VpaK11BI GGWCC 3 cut(s) 230, 275, 638
XapI RAATTY 2 cut(s) 259, 289
XceI RCATGY 1 cut(s) 151
XcmI CCANNNNNNNNNTGG 1 cut(s) 213
XspI CTAG 1 cut(s) 786
Zsp2I ATGCAT 1 cut(s) 1331
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.