Rh5AG369800

Belongs to the peptidase S10 family

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr5A
Physical Location & Seq
Reverse (-)
62573218 .. 62577873
4656 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh5AG369800.1

Sequence Viewer

Length: 1383 bp
ATGGAAAAGCTCTATATACTTGTTCTTGTCTCTGTTCTCCTTTTGGTGCCAACAGCAACTGCTGCAGCAACCCAAGACGGATCAGAGGACTGGGGCTATGTTGAAGTCAGACCCAAAGCCCACATGTTCTGGTGGCTTTATAGAAGTCCTAACAGAGTTGAGGATCCCTCAAAGCCATGGCCAATCATTCTCTGGCTCCAAGGTGGACCGGGAGCTTCAGGAGTTGGGATGGGGAACTTTCAAGAGGTTGGGCCATTGGACACCAATTTGAAGCCAAGGAATTCAACGTGGTTGCAAAAGGCCGATCTTTTATTTGTCGATAGCCCAGTTGGAACTGGATTCAGTTTTGTGGAGGACAACGCTCTGTTTGTGAAAAATGATGTGGAGGCAGCCACTGATTTGACAACATTACTGAAAGAGCTATTCAACAGAAATGAGAGCCTCCAGAAGAGTCCTCTGTTCATTGTGGCAGAGTCTTATGGGGGCAAATTTGCAGTGACTCTTGGACTTTCAGCTCTAAAAGCCATTGAAGAAGGAACACTAAAGCTTAGACTTGGAGGTGTTGCACTGGGAGACAGTTGGATCTCCCCGGAAGATTTTGTGCTTTCATGGGGTCCTCTTCTCAAAGACGTTTCAAGGATTGATGATGATGGCTTGGAGAAATCAAACAGTGTGGCTCAGCTGATCAAGCAGCAGATTAAGGATGGGAAATTAGAAGATGCAACTAATTCATGGAGTCACCTTGAGAACCTCATTAGCGCCGGGAGTAACAACGTGGATTTCTATAATTTCCTATTGGATTCAGGAATGGACCCAGTGTCTTCTGTGACAACCACTGAAATGAATGTTGCACTGAAAAAATATACAAGATATCTAAATTCCTTGAGGAGGCCTTCATTAGCACCAGGTGGTAATGGAGATCTTGAGACTTTGATGAATGGTGTCATTAAAAGGAAGCTTAAGATTATTCCAAACAATGTGACTTGGGGAATGCAGTCTGACAATGTCTTTGAAGCTATGATCGGAGACTTCATGAGACCCAGAATTGATGAGGTTGATCAACTCCTTGCCAAAGGGGTCAACGTCACAGTTTACAATGGGCAAGTTGATCTCATATGCGCAACCAAGGGGACTGAAGCATGGGTTGAAAAGCTCAAGTGGGATGGACTCCAACAATTTGTGAACAAGAGTAGAACCCCTCTCTACTGTGGGAATGATAGAGTTACAGGAGGATTTACCAGGTCGTACAAAAACCTCCACTTCTATTGGATTCTTGGAGCAGGACACTTTGTACCTGTGGATCAGCCCTGCATTGCTTTGAATATGGTGGCTGATATTACACAGTCACCTGCTGCTTCTGCTTCTCCACATAGAAGAACATAA

Protein Analysis

460

Amino Acids

50.82

Weight (kDa)

5.45

Isoelectric Point (pI)

30.89

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Peptidase_S10 PF00450 26 - 446 1.6e-80 Serine carboxypeptidase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 1357
Acc16I TGCGCA 1 cut(s) 1120
Acc36I ACCTGC 1 cut(s) 1357
AccB1I GGYRCC 1 cut(s) 46
AclWI GGATC 5 cut(s) 88, 158, 171, 590, 1308
AcoI YGGCCR 1 cut(s) 179
AcsI RAATTY 3 cut(s) 280, 488, 877
AcuI CTGAAG 2 cut(s) 201, 1155
AdeI CACNNNGTG 1 cut(s) 908
AfaI GTAC 2 cut(s) 1247, 1293
AfiI CCNNNNNNNGG 1 cut(s) 888
AflII CTTAAG 1 cut(s) 959
AflIII ACRYGT 1 cut(s) 123
AhdI GACNNNNNGTC 1 cut(s) 817
AjnI CCWGG 2 cut(s) 904, 1238
AluBI AGCT 9 cut(s) 10, 215, 421, 515, 547, 682, 958, 1016, 1153
AluI AGCT 9 cut(s) 10, 215, 421, 515, 547, 682, 958, 1016, 1153
Alw26I GTCTC 5 cut(s) 34, 567, 920, 1020, 1030
AlwI GGATC 5 cut(s) 88, 158, 171, 590, 1308
AlwNI CAGNNNCTG 2 cut(s) 59, 395
AoxI GGCC 4 cut(s) 179, 251, 300, 890
ApeKI GCWGC 5 cut(s) 62, 65, 389, 691, 1352
ApoI RAATTY 3 cut(s) 280, 488, 877
ArsI GACNNNNNNTTYG 2 cut(s) 992, 1024
AspLEI GCGC 2 cut(s) 761, 1121
AspS9I GGNCC 4 cut(s) 206, 251, 614, 811
AsuC2I CCSGG 3 cut(s) 210, 590, 763
AsuHPI GGTGA 2 cut(s) 731, 1338
AvaII GGWCC 3 cut(s) 206, 614, 811
BalI TGGCCA 1 cut(s) 181
BamHI GGATCC 1 cut(s) 163
BanI GGYRCC 1 cut(s) 46
BbsI GAAGAC 1 cut(s) 813
BbvI GCAGC 5 cut(s) 49, 77, 401, 703, 1339
BccI CCATC 4 cut(s) 223, 644, 698, 1157
BciT130I CCWGG 2 cut(s) 906, 1240
BclI TGATCA 2 cut(s) 684, 1057
BcnI CCSGG 3 cut(s) 210, 590, 763
BcoDI GTCTC 5 cut(s) 34, 567, 920, 1020, 1030
BfmI CTRYAG 1 cut(s) 63
BfoI RGCGCY 1 cut(s) 762
BfrI CTTAAG 1 cut(s) 959
BfuAI ACCTGC 1 cut(s) 1357
BglII AGATCT 1 cut(s) 919
BisI GCNGC 5 cut(s) 63, 66, 390, 692, 1353
BlpI GCTNAGC 1 cut(s) 678
BlsI GCNGC 5 cut(s) 64, 67, 391, 693, 1354
Bme1390I CCNGG 5 cut(s) 210, 590, 763, 906, 1240
Bme18I GGWCC 3 cut(s) 206, 614, 811
BmeRI GACNNNNNGTC 1 cut(s) 817
BmgT120I GGNCC 4 cut(s) 206, 251, 614, 811
BmiI GGNNCC 5 cut(s) 48, 165, 197, 615, 813
BmrFI CCNGG 5 cut(s) 210, 590, 763, 906, 1240
BmrI ACTGGG 4 cut(s) 100, 320, 578, 809
BmsI GCATC 1 cut(s) 709
BmuI ACTGGG 4 cut(s) 100, 320, 578, 809
BpiI GAAGAC 1 cut(s) 813
BplI GAGNNNNNCTC 2 cut(s) 152, 184
BpmI CTGGAG 1 cut(s) 428
Bpu1102I GCTNAGC 1 cut(s) 678
BpuEI CTTGAG 4 cut(s) 764, 904, 944, 1139
BpuMI CCSGG 3 cut(s) 210, 590, 763
BsaI GGTCTC 1 cut(s) 1030
BsaJI CCNNGG 5 cut(s) 176, 199, 275, 588, 1125
Bsc4I CCNNNNNNNGG 1 cut(s) 888
Bse1I ACTGG 5 cut(s) 95, 326, 340, 573, 815
Bse3DI GCAATG 1 cut(s) 1311
BseBI CCWGG 2 cut(s) 906, 1240
BseDI CCNNGG 5 cut(s) 176, 199, 275, 588, 1125
BseGI GGATG 3 cut(s) 234, 709, 1168
BseLI CCNNNNNNNGG 1 cut(s) 888
BseMI GCAATG 1 cut(s) 1311
BseMII CTCAG 1 cut(s) 692
BseNI ACTGG 5 cut(s) 95, 326, 340, 573, 815
BseRI GAGGAG 1 cut(s) 901
BseXI GCAGC 5 cut(s) 49, 77, 401, 703, 1339
BshFI GGCC 4 cut(s) 181, 253, 302, 892
BshNI GGYRCC 1 cut(s) 46
BsiSI CCGG 3 cut(s) 209, 590, 762
BslFI GGGAC 1 cut(s) 1144
BslI CCNNNNNNNGG 1 cut(s) 888
BsmAI GTCTC 5 cut(s) 34, 567, 920, 1020, 1030
BsmFI GGGAC 1 cut(s) 1144
BsmI GAATGC 1 cut(s) 996
BsnI GGCC 4 cut(s) 181, 253, 302, 892
Bso31I GGTCTC 1 cut(s) 1030
Bsp1720I GCTNAGC 1 cut(s) 678
Bsp19I CCATGG 1 cut(s) 176
BspANI GGCC 4 cut(s) 181, 253, 302, 892
BspCNI CTCAG 1 cut(s) 691
BspHI TCATGA 1 cut(s) 1032
BspLI GGNNCC 5 cut(s) 48, 165, 197, 615, 813
BspMAI CTGCAG 1 cut(s) 67
BspMI ACCTGC 1 cut(s) 1357
BspPI GGATC 5 cut(s) 88, 158, 171, 590, 1308
BspT107I GGYRCC 1 cut(s) 46
BspTI CTTAAG 1 cut(s) 959
BspTNI GGTCTC 1 cut(s) 1030
BsrDI GCAATG 1 cut(s) 1311
BsrI ACTGG 5 cut(s) 95, 326, 340, 573, 815
BssECI CCNNGG 5 cut(s) 176, 199, 275, 588, 1125
BssT1I CCWWGG 4 cut(s) 176, 199, 275, 1125
Bst2UI CCWGG 2 cut(s) 906, 1240
Bst4CI ACNGT 5 cut(s) 578, 671, 1090, 1208, 1344
Bst6I CTCTTC 2 cut(s) 443, 624
BstAFI CTTAAG 1 cut(s) 959
BstAPI GCANNNNNTGC 1 cut(s) 62
BstDEI CTNAG 2 cut(s) 548, 678
BstDSI CCRYGG 1 cut(s) 176
BstENI CCTNNNNNAGG 1 cut(s) 886
BstF5I GGATG 3 cut(s) 234, 709, 1168
BstH2I RGCGCY 1 cut(s) 762
BstHHI GCGC 2 cut(s) 761, 1121
BstMAI GTCTC 5 cut(s) 34, 567, 920, 1020, 1030
BstMWI GCNNNNNNNGC 4 cut(s) 62, 521, 688, 1358
BstNI CCWGG 2 cut(s) 906, 1240
BstNSI RCATGY 1 cut(s) 127
BstSCI CCNGG 5 cut(s) 208, 588, 761, 904, 1238
BstSFI CTRYAG 1 cut(s) 63
BstV1I GCAGC 5 cut(s) 49, 77, 401, 703, 1339
BstV2I GAAGAC 1 cut(s) 813
BstX2I RGATCY 3 cut(s) 163, 582, 919
BstYI RGATCY 3 cut(s) 163, 582, 919
BsuRI GGCC 4 cut(s) 181, 253, 302, 892
BtgI CCRYGG 1 cut(s) 176
BtsCI GGATG 3 cut(s) 234, 709, 1168
BtsI GCAGTG 1 cut(s) 501
BtsIMutI CAGTG 7 cut(s) 393, 501, 566, 676, 822, 834, 851
BveI ACCTGC 1 cut(s) 1357
CaiI CAGNNNCTG 2 cut(s) 59, 395
CciI TCATGA 1 cut(s) 1032
CfoI GCGC 2 cut(s) 761, 1121
Cfr13I GGNCC 4 cut(s) 206, 251, 614, 811
CsiI ACCWGGT 2 cut(s) 904, 1238
Csp6I GTAC 2 cut(s) 1246, 1292
CspCI CAANNNNNGTGG 4 cut(s) 654, 689, 1247, 1282
CviAII CATG 6 cut(s) 124, 177, 609, 732, 1033, 1140
CviQI GTAC 2 cut(s) 1246, 1292
DdeI CTNAG 2 cut(s) 548, 678
DraIII CACNNNGTG 1 cut(s) 908
DriI GACNNNNNGTC 1 cut(s) 817
EaeI YGGCCR 1 cut(s) 179
Eam1104I CTCTTC 2 cut(s) 443, 624
Eam1105I GACNNNNNGTC 1 cut(s) 817
EarI CTCTTC 2 cut(s) 443, 624
Eco130I CCWWGG 4 cut(s) 176, 199, 275, 1125
Eco147I AGGCCT 1 cut(s) 892
Eco31I GGTCTC 1 cut(s) 1030
Eco32I GATATC 1 cut(s) 872
Eco47I GGWCC 3 cut(s) 206, 614, 811
Eco57I CTGAAG 2 cut(s) 201, 1155
EcoNI CCTNNNNNAGG 1 cut(s) 886
EcoO109I RGGNCCY 1 cut(s) 614
EcoRI GAATTC 1 cut(s) 280
EcoRII CCWGG 2 cut(s) 904, 1238
EcoRV GATATC 1 cut(s) 872
EcoT14I CCWWGG 4 cut(s) 176, 199, 275, 1125
ErhI CCWWGG 4 cut(s) 176, 199, 275, 1125
FaeI CATG 6 cut(s) 127, 180, 612, 735, 1036, 1143
FaqI GGGAC 1 cut(s) 1144
FatI CATG 6 cut(s) 123, 176, 608, 731, 1032, 1139
FauNDI CATATG 1 cut(s) 1115
FbaI TGATCA 2 cut(s) 684, 1057
Fnu4HI GCNGC 5 cut(s) 63, 66, 390, 692, 1353
FokI GGATG 3 cut(s) 241, 716, 1175
Fsp4HI GCNGC 5 cut(s) 63, 66, 390, 692, 1353
FspI TGCGCA 1 cut(s) 1120
GlaI GCGC 2 cut(s) 760, 1120
GluI GCNGC 5 cut(s) 63, 66, 390, 692, 1353
GsuI CTGGAG 1 cut(s) 428
HaeII RGCGCY 1 cut(s) 762
HaeIII GGCC 4 cut(s) 181, 253, 302, 892
HapII CCGG 3 cut(s) 209, 590, 762
HhaI GCGC 2 cut(s) 761, 1121
Hin1II CATG 6 cut(s) 127, 180, 612, 735, 1036, 1143
Hin6I GCGC 2 cut(s) 759, 1119
HinP1I GCGC 2 cut(s) 759, 1119
HincII GTYRAC 1 cut(s) 1081
HindII GTYRAC 1 cut(s) 1081
HindIII AAGCTT 2 cut(s) 545, 956
HinfI GANTC 8 cut(s) 339, 451, 473, 499, 736, 800, 1167, 1270
HpaII CCGG 3 cut(s) 209, 590, 762
HphI GGTGA 2 cut(s) 731, 1338
Hpy166II GTNNAC 4 cut(s) 206, 1081, 1093, 1183
Hpy188I TCNGA 4 cut(s) 85, 110, 1000, 1025
Hpy188III TCNNGA 6 cut(s) 219, 242, 445, 804, 923, 1033
Hpy8I GTNNAC 4 cut(s) 206, 1081, 1093, 1183
HpyAV CCTTC 2 cut(s) 527, 903
HpyCH4III ACNGT 5 cut(s) 578, 671, 1090, 1208, 1344
HpyCH4IV ACGT 4 cut(s) 287, 630, 774, 1083
HpyCH4V TGCA 8 cut(s) 65, 295, 494, 566, 722, 851, 994, 1311
HpyF10VI GCNNNNNNNGC 4 cut(s) 62, 521, 688, 1358
HpyF3I CTNAG 2 cut(s) 548, 678
HpySE526I ACGT 4 cut(s) 287, 630, 774, 1083
Hsp92II CATG 6 cut(s) 127, 180, 612, 735, 1036, 1143
HspAI GCGC 2 cut(s) 759, 1119
Ksp22I TGATCA 2 cut(s) 684, 1057
LmnI GCTCC 3 cut(s) 201, 212, 1277
Lsp1109I GCAGC 5 cut(s) 49, 77, 401, 703, 1339
LweI GCATC 1 cut(s) 709
MabI ACCWGGT 2 cut(s) 904, 1238
MaeII ACGT 4 cut(s) 287, 630, 774, 1083
MaeIII GTNAC 8 cut(s) 496, 737, 767, 826, 979, 1084, 1222, 1344
MboII GAAGA 6 cut(s) 460, 542, 605, 611, 728, 813
MflI RGATCY 3 cut(s) 163, 582, 919
MlsI TGGCCA 1 cut(s) 181
MluCI AATT 9 cut(s) 265, 280, 488, 710, 727, 787, 877, 1044, 1175
MluNI TGGCCA 1 cut(s) 181
MlyI GAGTC 5 cut(s) 460, 482, 493, 745, 1161
MmeI TCCRAC 3 cut(s) 310, 560, 1195
Mox20I TGGCCA 1 cut(s) 181
MscI TGGCCA 1 cut(s) 181
MseI TTAA 3 cut(s) 699, 948, 960
MslI CAYNNNNRTG 1 cut(s) 839
Msp20I TGGCCA 1 cut(s) 181
MspA1I CMGCKG 1 cut(s) 682
MspCI CTTAAG 1 cut(s) 959
MspI CCGG 3 cut(s) 209, 590, 762
MspR9I CCNGG 5 cut(s) 210, 590, 763, 906, 1240
Mva1269I GAATGC 1 cut(s) 996
MvaI CCWGG 2 cut(s) 906, 1240
MwoI GCNNNNNNNGC 4 cut(s) 62, 521, 688, 1358
NciI CCSGG 3 cut(s) 210, 590, 763
NcoI CCATGG 1 cut(s) 176
NdeI CATATG 1 cut(s) 1115
NlaIII CATG 6 cut(s) 127, 180, 612, 735, 1036, 1143
NlaIV GGNNCC 5 cut(s) 48, 165, 197, 615, 813
NmuCI GTSAC 6 cut(s) 496, 737, 826, 979, 1084, 1344
NsbI TGCGCA 1 cut(s) 1120
NspI RCATGY 1 cut(s) 127
PagI TCATGA 1 cut(s) 1032
PaqCI CACCTGC 1 cut(s) 1357
PceI AGGCCT 1 cut(s) 892
PciI ACATGT 1 cut(s) 123
PctI GAATGC 1 cut(s) 996
PfeI GAWTC 3 cut(s) 339, 800, 1270
PflFI GACNNNGTC 1 cut(s) 1004
PkrI GCNGC 5 cut(s) 64, 67, 391, 693, 1354
PleI GAGTC 5 cut(s) 459, 481, 493, 744, 1161
PpsI GAGTC 5 cut(s) 459, 481, 493, 744, 1161
PpuMI RGGWCCY 1 cut(s) 614
PscI ACATGT 1 cut(s) 123
Psp5II RGGWCCY 1 cut(s) 614
Psp6I CCWGG 2 cut(s) 904, 1238
PspGI CCWGG 2 cut(s) 904, 1238
PspN4I GGNNCC 5 cut(s) 48, 165, 197, 615, 813
PspPI GGNCC 4 cut(s) 206, 251, 614, 811
PspPPI RGGWCCY 1 cut(s) 614
PstI CTGCAG 1 cut(s) 67
PstNI CAGNNNCTG 2 cut(s) 59, 395
PsuI RGATCY 3 cut(s) 163, 582, 919
PsyI GACNNNGTC 1 cut(s) 1004
PvuII CAGCTG 1 cut(s) 682
RsaI GTAC 2 cut(s) 1247, 1293
RsaNI GTAC 2 cut(s) 1246, 1292
RseI CAYNNNNRTG 1 cut(s) 839
SaqAI TTAA 3 cut(s) 699, 948, 960
SatI GCNGC 5 cut(s) 63, 66, 390, 692, 1353
Sau96I GGNCC 4 cut(s) 206, 251, 614, 811
SchI GAGTC 5 cut(s) 460, 482, 493, 745, 1161
ScrFI CCNGG 5 cut(s) 210, 590, 763, 906, 1240
SexAI ACCWGGT 2 cut(s) 904, 1238
SfaNI GCATC 1 cut(s) 709
SfcI CTRYAG 1 cut(s) 63
SinI GGWCC 3 cut(s) 206, 614, 811
SmiMI CAYNNNNRTG 1 cut(s) 839
SmlI CTYRAG 5 cut(s) 743, 883, 923, 959, 1154
SmoI CTYRAG 5 cut(s) 743, 883, 923, 959, 1154
Sse9I AATT 9 cut(s) 265, 280, 488, 710, 727, 787, 877, 1044, 1175
SseBI AGGCCT 1 cut(s) 892
StuI AGGCCT 1 cut(s) 892
StyD4I CCNGG 5 cut(s) 208, 588, 761, 904, 1238
StyI CCWWGG 4 cut(s) 176, 199, 275, 1125
TaaI ACNGT 5 cut(s) 578, 671, 1090, 1208, 1344
TaiI ACGT 4 cut(s) 290, 633, 777, 1086
TaqI TCGA 1 cut(s) 318
TasI AATT 9 cut(s) 265, 280, 488, 710, 727, 787, 877, 1044, 1175
TfiI GAWTC 3 cut(s) 339, 800, 1270
Tru1I TTAA 3 cut(s) 699, 948, 960
Tru9I TTAA 3 cut(s) 699, 948, 960
TscAI CASTG 7 cut(s) 400, 501, 573, 676, 822, 841, 858
TseFI GTSAC 6 cut(s) 496, 737, 826, 979, 1084, 1344
TseI GCWGC 5 cut(s) 62, 65, 389, 691, 1352
Tsp45I GTSAC 6 cut(s) 496, 737, 826, 979, 1084, 1344
TspDTI ATGAA 7 cut(s) 451, 597, 720, 857, 885, 950, 1021
TspGWI ACGGA 1 cut(s) 93
TspRI CASTG 7 cut(s) 400, 501, 573, 676, 822, 841, 858
Tth111I GACNNNGTC 1 cut(s) 1004
Vha464I CTTAAG 1 cut(s) 959
VpaK11BI GGWCC 3 cut(s) 206, 614, 811
XagI CCTNNNNNAGG 1 cut(s) 886
XapI RAATTY 3 cut(s) 280, 488, 877
XceI RCATGY 1 cut(s) 127
XcmI CCANNNNNNNNNTGG 1 cut(s) 189
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.