Rmu_sc0000317.1_g000012

Belongs to the peptidase S10 family

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0000317.1
Physical Location & Seq
Reverse (-)
75932 .. 79232
3301 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0000317.1_g000012.1.cds

Sequence Viewer

Length: 990 bp
atgttctggtggctttatagaagtcctaacagagttgaggatccctcaaagccatggccaattattctctggctccaaggtggacctggaggttcaggagttgggattgggaactttgaagaggttgggccattggacaccaatttgaagccaaggaattcaacgtggttgcaaaaggcagatcttttatttgtggataacccagttggaaccggattcagttttgtggaggacaacgctctgtttgtgaaaaatgatgtggaggcagccactgatttgacaacactattgaaagagctattcaacagaaatgagagcctccagaagagtcctctgttcattgtggcagagtcttatgggggcaaatttgcagtgactcttggactttccgctctaaaagccattgaagaaggaacactaaagctcagacttggaggtgttgcactgggagacagttggatctccccggaagattttgtgctttcatggggtcctcttcttaaagacgtttcacggattgatgataatagcttggagaaatcaaacagtgtggctcagctgatcaagcagcagattaaggatgggaaattaggagatgcaactaattcatggatgctacttgagagcctcatcagatccgggaagggagaagtagcgatggcaatggggcgggttggggatggggatcacaataccatccccatccccggggggcgggtatccaatggagctccgctccgctggggatttttgccatccctagggagaagtcatcctccaccttgccggcctccggtgaccagtggcagggcgccggctaccggtgaccggaatccggcgacaggtgacaggaatccggcgaacggtgactggaatccggtgaccagtgacgggaatccggcgaacggtgaccggaatccggtgactgtgaccggaatccgacgaccgttgaccggaatccggcgaccggtccctaataatatccagtaa

Protein Analysis

329

Amino Acids

35.5

Weight (kDa)

6.77

Isoelectric Point (pI)

40.84

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 811
AccBSI CCGCTC 2 cut(s) 392, 736
AciI CCGC 5 cut(s) 390, 670, 715, 734, 739
AclWI GGATC 5 cut(s) 35, 48, 467, 630, 693
AcoI YGGCCR 1 cut(s) 56
AcsI RAATTY 2 cut(s) 157, 365
AcyI GRCGYC 1 cut(s) 812
AgeI ACCGGT 2 cut(s) 821, 967
AgsI TTSAA 6 cut(s) 119, 148, 162, 292, 304, 407
AjnI CCWGG 1 cut(s) 85
AluBI AGCT 5 cut(s) 298, 424, 531, 559, 731
AluI AGCT 5 cut(s) 298, 424, 531, 559, 731
Alw21I GWGCWC 1 cut(s) 733
Alw26I GTCTC 1 cut(s) 444
AlwI GGATC 5 cut(s) 35, 48, 467, 630, 693
AlwNI CAGNNNCTG 1 cut(s) 272
Ama87I CYCGRG 1 cut(s) 707
AoxI GGCC 3 cut(s) 56, 128, 788
ApeKI GCWGC 2 cut(s) 266, 568
ApoI RAATTY 2 cut(s) 157, 365
AsiGI ACCGGT 2 cut(s) 821, 967
AspA2I CCTAGG 1 cut(s) 760
AspLEI GCGC 1 cut(s) 814
AspS9I GGNCC 4 cut(s) 83, 128, 491, 970
AsuC2I CCSGG 4 cut(s) 467, 640, 708, 709
AsuHPI GGTGA 7 cut(s) 808, 836, 857, 878, 892, 920, 934
AvaI CYCGRG 1 cut(s) 707
AvaII GGWCC 3 cut(s) 83, 491, 970
AvrII CCTAGG 1 cut(s) 760
BalI TGGCCA 1 cut(s) 58
BamHI GGATCC 1 cut(s) 40
BanI GGYRCC 1 cut(s) 811
BanII GRGCYC 1 cut(s) 733
Bbv12I GWGCWC 1 cut(s) 733
BbvI GCAGC 2 cut(s) 278, 580
BccI CCATC 6 cut(s) 575, 652, 674, 704, 710, 763
BciT130I CCWGG 1 cut(s) 87
BciVI GTATCC 1 cut(s) 730
BclI TGATCA 1 cut(s) 561
BcnI CCSGG 4 cut(s) 467, 640, 708, 709
BcoDI GTCTC 1 cut(s) 444
BfaI CTAG 1 cut(s) 761
BfoI RGCGCY 1 cut(s) 815
BfuI GTATCC 1 cut(s) 730
BglII AGATCT 1 cut(s) 181
BisI GCNGC 2 cut(s) 267, 569
BlnI CCTAGG 1 cut(s) 760
BlpI GCTNAGC 1 cut(s) 555
BlsI GCNGC 2 cut(s) 268, 570
Bme1390I CCNGG 5 cut(s) 87, 467, 640, 708, 709
Bme18I GGWCC 3 cut(s) 83, 491, 970
BmeT110I CYCGRG 1 cut(s) 707
BmgT120I GGNCC 4 cut(s) 83, 128, 491, 970
BmiI GGNNCC 6 cut(s) 42, 74, 211, 492, 813, 972
BmrFI CCNGG 5 cut(s) 87, 467, 640, 708, 709
BmrI ACTGGG 2 cut(s) 197, 455
BmsI GCATC 2 cut(s) 586, 603
BmuI ACTGGG 2 cut(s) 197, 455
BplI GAGNNNNNCTC 4 cut(s) 29, 61, 720, 752
BpmI CTGGAG 2 cut(s) 108, 305
Bpu1102I GCTNAGC 1 cut(s) 555
BpuEI CTTGAG 1 cut(s) 641
BpuMI CCSGG 4 cut(s) 467, 640, 708, 709
BsaBI GATNNNNATC 1 cut(s) 684
BsaHI GRCGYC 1 cut(s) 812
BsaJI CCNNGG 8 cut(s) 53, 76, 152, 465, 706, 707, 708, 760
Bse118I RCCGGY 4 cut(s) 786, 814, 821, 967
Bse1I ACTGG 6 cut(s) 203, 450, 801, 875, 885, 985
Bse3DI GCAATG 1 cut(s) 669
Bse8I GATNNNNATC 1 cut(s) 684
BseBI CCWGG 1 cut(s) 87
BseDI CCNNGG 8 cut(s) 53, 76, 152, 465, 706, 707, 708, 760
BseGI GGATG 7 cut(s) 586, 618, 685, 696, 702, 755, 772
BseJI GATNNNNATC 1 cut(s) 684
BseMI GCAATG 1 cut(s) 669
BseMII CTCAG 2 cut(s) 439, 569
BseNI ACTGG 6 cut(s) 203, 450, 801, 875, 885, 985
BseXI GCAGC 2 cut(s) 278, 580
BseYI CCCAGC 1 cut(s) 741
Bsh1285I CGRYCG 2 cut(s) 947, 968
BshFI GGCC 3 cut(s) 58, 130, 790
BshNI GGYRCC 1 cut(s) 811
BshTI ACCGGT 2 cut(s) 821, 967
BsiEI CGRYCG 2 cut(s) 947, 968
BsiHKAI GWGCWC 1 cut(s) 733
BsiHKCI CYCGRG 1 cut(s) 707
BslFI GGGAC 1 cut(s) 956
BsmAI GTCTC 1 cut(s) 444
BsmFI GGGAC 1 cut(s) 956
BsnI GGCC 3 cut(s) 58, 130, 790
BsoBI CYCGRG 1 cut(s) 707
Bsp1286I GDGCHC 1 cut(s) 733
Bsp143I GATC 6 cut(s) 40, 181, 459, 561, 635, 685
Bsp1720I GCTNAGC 1 cut(s) 555
Bsp19I CCATGG 1 cut(s) 53
BspACI CCGC 5 cut(s) 390, 670, 715, 734, 739
BspANI GGCC 3 cut(s) 58, 130, 790
BspCNI CTCAG 2 cut(s) 438, 568
BspLI GGNNCC 6 cut(s) 42, 74, 211, 492, 813, 972
BspPI GGATC 5 cut(s) 35, 48, 467, 630, 693
BspT107I GGYRCC 1 cut(s) 811
BsrBI CCGCTC 2 cut(s) 392, 736
BsrDI GCAATG 1 cut(s) 669
BsrFI RCCGGY 4 cut(s) 786, 814, 821, 967
BsrI ACTGG 6 cut(s) 203, 450, 801, 875, 885, 985
BssAI RCCGGY 4 cut(s) 786, 814, 821, 967
BssECI CCNNGG 8 cut(s) 53, 76, 152, 465, 706, 707, 708, 760
BssMI GATC 6 cut(s) 40, 181, 459, 561, 635, 685
BssNI GRCGYC 1 cut(s) 812
BssT1I CCWWGG 4 cut(s) 53, 76, 152, 760
Bst2UI CCWGG 1 cut(s) 87
Bst4CI ACNGT 6 cut(s) 455, 548, 866, 908, 928, 948
Bst6I CTCTTC 3 cut(s) 114, 320, 501
BstACI GRCGYC 1 cut(s) 812
BstC8I GCNNGC 2 cut(s) 788, 816
BstDEI CTNAG 2 cut(s) 425, 555
BstDSI CCRYGG 1 cut(s) 53
BstEII GGTNACC 4 cut(s) 796, 824, 880, 908
BstF5I GGATG 7 cut(s) 586, 618, 685, 696, 702, 755, 772
BstH2I RGCGCY 1 cut(s) 815
BstHHI GCGC 1 cut(s) 814
BstKTI GATC 6 cut(s) 43, 184, 462, 564, 638, 688
BstMAI GTCTC 1 cut(s) 444
BstMBI GATC 6 cut(s) 40, 181, 459, 561, 635, 685
BstMCI CGRYCG 2 cut(s) 947, 968
BstMWI GCNNNNNNNGC 2 cut(s) 398, 565
BstNI CCWGG 1 cut(s) 87
BstPI GGTNACC 4 cut(s) 796, 824, 880, 908
BstSCI CCNGG 5 cut(s) 85, 465, 638, 706, 707
BstV1I GCAGC 2 cut(s) 278, 580
BstX2I RGATCY 4 cut(s) 40, 181, 459, 635
BstYI RGATCY 4 cut(s) 40, 181, 459, 635
BsuI GTATCC 1 cut(s) 730
BsuRI GGCC 3 cut(s) 58, 130, 790
BtgI CCRYGG 1 cut(s) 53
BtgZI GCGATG 1 cut(s) 671
BtsCI GGATG 7 cut(s) 586, 618, 685, 696, 702, 755, 772
BtsI GCAGTG 1 cut(s) 378
BtsIMutI CAGTG 6 cut(s) 270, 378, 443, 553, 808, 892
Cac8I GCNNGC 2 cut(s) 788, 816
CaiI CAGNNNCTG 1 cut(s) 272
CfoI GCGC 1 cut(s) 814
Cfr10I RCCGGY 4 cut(s) 786, 814, 821, 967
Cfr13I GGNCC 4 cut(s) 83, 128, 491, 970
Cfr9I CCCGGG 1 cut(s) 707
CspAI ACCGGT 2 cut(s) 821, 967
CspCI CAANNNNNGTGG 2 cut(s) 531, 566
CviAII CATG 3 cut(s) 54, 486, 609
DdeI CTNAG 2 cut(s) 425, 555
DinI GGCGCC 1 cut(s) 813
DpnI GATC 6 cut(s) 42, 183, 461, 563, 637, 687
DpnII GATC 6 cut(s) 40, 181, 459, 561, 635, 685
EaeI YGGCCR 1 cut(s) 56
Eam1104I CTCTTC 3 cut(s) 114, 320, 501
EarI CTCTTC 3 cut(s) 114, 320, 501
Ecl136II GAGCTC 1 cut(s) 731
Eco130I CCWWGG 4 cut(s) 53, 76, 152, 760
Eco24I GRGCYC 1 cut(s) 733
Eco47I GGWCC 3 cut(s) 83, 491, 970
Eco53kI GAGCTC 1 cut(s) 731
Eco88I CYCGRG 1 cut(s) 707
Eco91I GGTNACC 4 cut(s) 796, 824, 880, 908
EcoICRI GAGCTC 1 cut(s) 731
EcoO109I RGGNCCY 1 cut(s) 491
EcoO65I GGTNACC 4 cut(s) 796, 824, 880, 908
EcoRI GAATTC 1 cut(s) 157
EcoRII CCWGG 1 cut(s) 85
EcoT14I CCWWGG 4 cut(s) 53, 76, 152, 760
EcoT38I GRGCYC 1 cut(s) 733
EgeI GGCGCC 1 cut(s) 813
EheI GGCGCC 1 cut(s) 813
ErhI CCWWGG 4 cut(s) 53, 76, 152, 760
FaeI CATG 3 cut(s) 57, 489, 612
FaiI YATR 5 cut(s) 18, 55, 357, 487, 610
FaqI GGGAC 1 cut(s) 956
FatI CATG 3 cut(s) 53, 485, 608
FauI CCCGC 2 cut(s) 663, 708
FbaI TGATCA 1 cut(s) 561
Fnu4HI GCNGC 2 cut(s) 267, 569
FokI GGATG 7 cut(s) 593, 625, 683, 689, 692, 742, 759
FriOI GRGCYC 1 cut(s) 733
Fsp4HI GCNGC 2 cut(s) 267, 569
FspBI CTAG 1 cut(s) 761
GlaI GCGC 1 cut(s) 813
GluI GCNGC 2 cut(s) 267, 569
GsaI CCCAGC 1 cut(s) 745
GsuI CTGGAG 2 cut(s) 108, 305
HaeII RGCGCY 1 cut(s) 815
HaeIII GGCC 3 cut(s) 58, 130, 790
HhaI GCGC 1 cut(s) 814
Hin1I GRCGYC 1 cut(s) 812
Hin1II CATG 3 cut(s) 57, 489, 612
Hin6I GCGC 1 cut(s) 812
HinP1I GCGC 1 cut(s) 812
HincII GTYRAC 1 cut(s) 951
HindII GTYRAC 1 cut(s) 951
HphI GGTGA 7 cut(s) 808, 836, 857, 878, 892, 920, 934
Hpy166II GTNNAC 2 cut(s) 83, 951
Hpy188I TCNGA 3 cut(s) 428, 635, 941
Hpy188III TCNNGA 2 cut(s) 96, 322
Hpy8I GTNNAC 2 cut(s) 83, 951
Hpy99I CGWCG 1 cut(s) 945
HpyAV CCTTC 2 cut(s) 404, 637
HpyCH4III ACNGT 6 cut(s) 455, 548, 866, 908, 928, 948
HpyCH4IV ACGT 2 cut(s) 164, 507
HpyCH4V TGCA 4 cut(s) 172, 371, 443, 599
HpyF10VI GCNNNNNNNGC 2 cut(s) 398, 565
HpyF3I CTNAG 2 cut(s) 425, 555
HpySE526I ACGT 2 cut(s) 164, 507
Hsp92I GRCGYC 1 cut(s) 812
Hsp92II CATG 3 cut(s) 57, 489, 612
HspAI GCGC 1 cut(s) 812
KasI GGCGCC 1 cut(s) 811
KroI GCCGGC 2 cut(s) 786, 814
KroNI GCCGGC 2 cut(s) 788, 816
Ksp22I TGATCA 1 cut(s) 561
Kzo9I GATC 6 cut(s) 40, 181, 459, 561, 635, 685
LmnI GCTCC 4 cut(s) 78, 728, 736, 741
Lsp1109I GCAGC 2 cut(s) 278, 580
LweI GCATC 2 cut(s) 586, 603
MaeI CTAG 1 cut(s) 761
MaeII ACGT 2 cut(s) 164, 507
MalI GATC 6 cut(s) 42, 183, 461, 563, 637, 687
MbiI CCGCTC 2 cut(s) 392, 736
MboI GATC 6 cut(s) 40, 181, 459, 561, 635, 685
MboII GAAGA 5 cut(s) 131, 337, 419, 482, 488
MflI RGATCY 4 cut(s) 40, 181, 459, 635
MhlI GDGCHC 1 cut(s) 733
MlsI TGGCCA 1 cut(s) 58
MluCI AATT 6 cut(s) 60, 142, 157, 365, 587, 604
MluNI TGGCCA 1 cut(s) 58
Mly113I GGCGCC 1 cut(s) 812
MlyI GAGTC 3 cut(s) 337, 359, 370
MmeI TCCRAC 3 cut(s) 187, 437, 964
Mox20I TGGCCA 1 cut(s) 58
MroNI GCCGGC 2 cut(s) 786, 814
MscI TGGCCA 1 cut(s) 58
MseI TTAA 2 cut(s) 501, 576
Msp20I TGGCCA 1 cut(s) 58
MspA1I CMGCKG 2 cut(s) 559, 741
MspR9I CCNGG 5 cut(s) 87, 467, 640, 708, 709
MvaI CCWGG 1 cut(s) 87
MwoI GCNNNNNNNGC 2 cut(s) 398, 565
NaeI GCCGGC 2 cut(s) 788, 816
NarI GGCGCC 1 cut(s) 812
NciI CCSGG 4 cut(s) 467, 640, 708, 709
NcoI CCATGG 1 cut(s) 53
NdeII GATC 6 cut(s) 40, 181, 459, 561, 635, 685
NgoMIV GCCGGC 2 cut(s) 786, 814
NlaIII CATG 3 cut(s) 57, 489, 612
NlaIV GGNNCC 6 cut(s) 42, 74, 211, 492, 813, 972
PdiI GCCGGC 2 cut(s) 788, 816
PfeI GAWTC 8 cut(s) 216, 832, 853, 874, 895, 916, 936, 957
PfoI TCCNGGA 1 cut(s) 638
PinAI ACCGGT 2 cut(s) 821, 967
PkrI GCNGC 2 cut(s) 268, 570
PleI GAGTC 3 cut(s) 336, 358, 370
PluTI GGCGCC 1 cut(s) 815
PpsI GAGTC 3 cut(s) 336, 358, 370
PpuMI RGGWCCY 1 cut(s) 491
Psp124BI GAGCTC 1 cut(s) 733
Psp5II RGGWCCY 1 cut(s) 491
Psp6I CCWGG 1 cut(s) 85
PspEI GGTNACC 4 cut(s) 796, 824, 880, 908
PspFI CCCAGC 1 cut(s) 741
PspGI CCWGG 1 cut(s) 85
PspN4I GGNNCC 6 cut(s) 42, 74, 211, 492, 813, 972
PspPI GGNCC 4 cut(s) 83, 128, 491, 970
PspPPI RGGWCCY 1 cut(s) 491
PstNI CAGNNNCTG 1 cut(s) 272
PsuI RGATCY 4 cut(s) 40, 181, 459, 635
PvuII CAGCTG 1 cut(s) 559
SacI GAGCTC 1 cut(s) 733
SaqAI TTAA 2 cut(s) 501, 576
SatI GCNGC 2 cut(s) 267, 569
Sau3AI GATC 6 cut(s) 40, 181, 459, 561, 635, 685
Sau96I GGNCC 4 cut(s) 83, 128, 491, 970
SchI GAGTC 3 cut(s) 337, 359, 370
ScrFI CCNGG 5 cut(s) 87, 467, 640, 708, 709
SduI GDGCHC 1 cut(s) 733
SfaNI GCATC 2 cut(s) 586, 603
SfoI GGCGCC 1 cut(s) 813
SinI GGWCC 3 cut(s) 83, 491, 970
SmaI CCCGGG 1 cut(s) 709
SmlI CTYRAG 1 cut(s) 620
SmoI CTYRAG 1 cut(s) 620
Sse9I AATT 6 cut(s) 60, 142, 157, 365, 587, 604
SsiI CCGC 5 cut(s) 390, 670, 715, 734, 739
SspDI GGCGCC 1 cut(s) 811
SspMI CTAG 1 cut(s) 761
SstI GAGCTC 1 cut(s) 733
StyD4I CCNGG 5 cut(s) 85, 465, 638, 706, 707
StyI CCWWGG 4 cut(s) 53, 76, 152, 760
TaaI ACNGT 6 cut(s) 455, 548, 866, 908, 928, 948
TaiI ACGT 2 cut(s) 167, 510
TasI AATT 6 cut(s) 60, 142, 157, 365, 587, 604
TfiI GAWTC 8 cut(s) 216, 832, 853, 874, 895, 916, 936, 957
Tru1I TTAA 2 cut(s) 501, 576
Tru9I TTAA 2 cut(s) 501, 576
TscAI CASTG 6 cut(s) 277, 378, 450, 553, 808, 892
TseI GCWGC 2 cut(s) 266, 568
TspDTI ATGAA 3 cut(s) 328, 474, 597
TspGWI ACGGA 1 cut(s) 529
TspMI CCCGGG 1 cut(s) 707
TspRI CASTG 6 cut(s) 277, 378, 450, 553, 808, 892
VpaK11BI GGWCC 3 cut(s) 83, 491, 970
XapI RAATTY 2 cut(s) 157, 365
XcmI CCANNNNNNNNNTGG 2 cut(s) 66, 83
XmaI CCCGGG 1 cut(s) 707
XmaJI CCTAGG 1 cut(s) 760
XspI CTAG 1 cut(s) 761
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.