RLG00000035093

Belongs to the peptidase S10 family

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr7
Physical Location & Seq
Reverse (-)
60665870 .. 60671400
5531 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000035093

Sequence Viewer

Length: 1395 bp
ATGGAAAAGGTCCCTATACTTGTTCTTGTTTCTGTTCTCCTTTTGGTGCCAACAGCAACTGCTGCTAGAACCCAAGATGGATCAGAGGACTGGGGCTATGTTGAAGTCCGACCCAAAGCACACATGTTCTGGTGGCTTTATAGAAGTCCTAACAGAGTTGAGGATCCCTCAAAGCCATGGCCAATTATTCTCTGGCTCCAAGGTGGACCTGGAGGTTCAGGAGTTGGGATGGGGAACTTTGAAGAGGTTGGGCCATTGGACACCAATTTGAAGCCAAGGAATTCAACGTGGTTGCAAAAGGCAGATCTTTTATTTGTGGATAACCCAGTTGGAACCGGATTCAGTTTTGTGGAGGACAACGCTCTGTTTGTGAAAAATGATGTGGAGGCAGCCACTGATTTGACAACATTACTGAAAGAGCTATTCAACAGAAATGAGAGCCTCCAGAAGAGTCCTCTGTTCATTGTGGCAGAGTCTTATGGAGGCAAATTTGCAGCGACTCTTGGTCTTTCAGCTATAAAAGCCATTGAAGAAGGAACATTAAAGCTTAGACTTGGAGGAGTTGCATTGGGAGACAGTTGGATCTCCCCGGAAGATTTTGTGCTTTCATGGGGTCCTCTTCTCAAAGACGTTTCAAGGATTGATGATAATGGCTTGGAGAAATCAAACAGTGTGGCTCAGCTGATCAAGCAGCAGATTAAGGATGGGAAATTAGAAGATGCAACTAATTCATGGAGTCACCTTGAGAACCTCATTAGCGCCGGGAGTAACGACGTGGATTTCTATAATTTCCTATTGGATTCAGGAATGGACCCAGTGTCAGTGTCTATGACAACCACTGAAATATCACAAAAAAAATTTGCACTTGAGAGATATACAAGATATCTAAATTCCTTGAGGCAGTCTTCATTAGCACCAGGTGGTAATGGAGATCTTGACACTTTGTTGAATGGTGTCATTAAAAGGAAGCTTAAGATTATCCCAAAAAATATGACTTGGGGAATGCAGTCCGACAAAGTGTTCGACGCTATGACTGGAGACTTCATGAGACCCAGAATTGATGAGGTTGATCAACTCCTTGCCAAAGGGGTCAATGTCACAATATACAATGGGCAAGTTGATCTTATATGCGCAACCAAGGGGACAGAAGCATGGATTGAAAAGCTCAAGTGGGATGGACTCCAACAATTTCAGAACAAGAGTAGAACCCCTCTCTACTGTGGAAGTGATAAAAGTACAAGAGGATTCACCAGGACGTACAAAAACCTTCACTTCTATTGGATTCTTGGAGCAGGACACTTTGTACCCGTGGATCAGCCCTGCATTGCTTTGAATATGGTGGCTGATATTACACAGTCACCTGCCGATGCTTCTGCTCCACATAGAAGAACATGA

Protein Analysis

465

Amino Acids

51.46

Weight (kDa)

5.58

Isoelectric Point (pI)

29.73

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Peptidase_S10 PF00450 26 - 450 1e-81 Serine carboxypeptidase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 1369
Acc16I TGCGCA 1 cut(s) 1132
Acc36I ACCTGC 1 cut(s) 1369
AccB1I GGYRCC 1 cut(s) 46
AclWI GGATC 5 cut(s) 88, 158, 171, 590, 1320
AcoI YGGCCR 1 cut(s) 179
AcsI RAATTY 4 cut(s) 280, 488, 857, 889
AdeI CACNNNGTG 1 cut(s) 920
AfaI GTAC 3 cut(s) 1237, 1259, 1305
AflII CTTAAG 1 cut(s) 971
AflIII ACRYGT 1 cut(s) 123
AhdI GACNNNNNGTC 2 cut(s) 504, 817
AjiI CACGTC 1 cut(s) 775
AjnI CCWGG 3 cut(s) 208, 916, 1250
AluBI AGCT 6 cut(s) 421, 515, 547, 682, 970, 1165
AluI AGCT 6 cut(s) 421, 515, 547, 682, 970, 1165
Alw26I GTCTC 3 cut(s) 567, 1032, 1042
AlwI GGATC 5 cut(s) 88, 158, 171, 590, 1320
AlwNI CAGNNNCTG 2 cut(s) 59, 395
AoxI GGCC 2 cut(s) 179, 251
ApeKI GCWGC 4 cut(s) 62, 389, 494, 691
ApoI RAATTY 4 cut(s) 280, 488, 857, 889
ArsI GACNNNNNNTTYG 2 cut(s) 1004, 1036
AspLEI GCGC 2 cut(s) 761, 1133
AspS9I GGNCC 5 cut(s) 10, 206, 251, 614, 811
AsuC2I CCSGG 2 cut(s) 590, 763
AsuHPI GGTGA 3 cut(s) 731, 1240, 1350
AvaII GGWCC 4 cut(s) 10, 206, 614, 811
BalI TGGCCA 1 cut(s) 181
BamHI GGATCC 1 cut(s) 163
BanI GGYRCC 1 cut(s) 46
BbsI GAAGAC 1 cut(s) 897
BbvI GCAGC 4 cut(s) 49, 401, 506, 703
BccI CCATC 4 cut(s) 71, 223, 698, 1169
BcgI CGANNNNNNTGC 2 cut(s) 1355, 1389
BciT130I CCWGG 3 cut(s) 210, 918, 1252
BclI TGATCA 2 cut(s) 684, 1069
BcnI CCSGG 2 cut(s) 590, 763
BcoDI GTCTC 3 cut(s) 567, 1032, 1042
BfaI CTAG 1 cut(s) 66
BfoI RGCGCY 1 cut(s) 762
BfrI CTTAAG 1 cut(s) 971
BfuAI ACCTGC 1 cut(s) 1369
BglII AGATCT 2 cut(s) 304, 931
BisI GCNGC 4 cut(s) 63, 390, 495, 692
BlpI GCTNAGC 1 cut(s) 678
BlsI GCNGC 4 cut(s) 64, 391, 496, 693
Bme1390I CCNGG 5 cut(s) 210, 590, 763, 918, 1252
Bme18I GGWCC 4 cut(s) 10, 206, 614, 811
BmeRI GACNNNNNGTC 2 cut(s) 504, 817
BmgBI CACGTC 1 cut(s) 775
BmgT120I GGNCC 5 cut(s) 10, 206, 251, 614, 811
BmiI GGNNCC 7 cut(s) 12, 48, 165, 197, 334, 615, 813
BmrFI CCNGG 5 cut(s) 210, 590, 763, 918, 1252
BmrI ACTGGG 3 cut(s) 100, 320, 809
BmsI GCATC 2 cut(s) 709, 1357
BmuI ACTGGG 3 cut(s) 100, 320, 809
BpiI GAAGAC 1 cut(s) 897
BplI GAGNNNNNCTC 2 cut(s) 152, 184
BpmI CTGGAG 3 cut(s) 231, 428, 1056
Bpu1102I GCTNAGC 1 cut(s) 678
BpuEI CTTGAG 4 cut(s) 764, 887, 916, 1151
BpuMI CCSGG 2 cut(s) 590, 763
BsaI GGTCTC 1 cut(s) 1042
BsaJI CCNNGG 6 cut(s) 176, 199, 275, 588, 1137, 1308
BsaWI WCCGGW 1 cut(s) 335
Bse1I ACTGG 4 cut(s) 95, 326, 815, 1039
Bse3DI GCAATG 1 cut(s) 1323
BseBI CCWGG 3 cut(s) 210, 918, 1252
BseDI CCNNGG 6 cut(s) 176, 199, 275, 588, 1137, 1308
BseGI GGATG 3 cut(s) 234, 709, 1180
BseMI GCAATG 1 cut(s) 1323
BseMII CTCAG 1 cut(s) 692
BseNI ACTGG 4 cut(s) 95, 326, 815, 1039
BseRI GAGGAG 1 cut(s) 573
BseXI GCAGC 4 cut(s) 49, 401, 506, 703
BshFI GGCC 2 cut(s) 181, 253
BshNI GGYRCC 1 cut(s) 46
BsiSI CCGG 3 cut(s) 336, 590, 762
BslFI GGGAC 1 cut(s) 1156
BsmAI GTCTC 3 cut(s) 567, 1032, 1042
BsmFI GGGAC 1 cut(s) 1156
BsmI GAATGC 1 cut(s) 1008
BsnI GGCC 2 cut(s) 181, 253
Bso31I GGTCTC 1 cut(s) 1042
Bsp143I GATC 9 cut(s) 80, 163, 304, 582, 684, 931, 1069, 1120, 1312
Bsp1720I GCTNAGC 1 cut(s) 678
Bsp19I CCATGG 1 cut(s) 176
BspANI GGCC 2 cut(s) 181, 253
BspCNI CTCAG 1 cut(s) 691
BspHI TCATGA 1 cut(s) 1044
BspLI GGNNCC 7 cut(s) 12, 48, 165, 197, 334, 615, 813
BspMI ACCTGC 1 cut(s) 1369
BspPI GGATC 5 cut(s) 88, 158, 171, 590, 1320
BspT107I GGYRCC 1 cut(s) 46
BspTI CTTAAG 1 cut(s) 971
BspTNI GGTCTC 1 cut(s) 1042
BsrDI GCAATG 1 cut(s) 1323
BsrI ACTGG 4 cut(s) 95, 326, 815, 1039
BssECI CCNNGG 6 cut(s) 176, 199, 275, 588, 1137, 1308
BssMI GATC 9 cut(s) 80, 163, 304, 582, 684, 931, 1069, 1120, 1312
BssT1I CCWWGG 4 cut(s) 176, 199, 275, 1137
Bst2UI CCWGG 3 cut(s) 210, 918, 1252
Bst4CI ACNGT 4 cut(s) 578, 671, 1220, 1356
Bst6I CTCTTC 3 cut(s) 237, 443, 624
BstAFI CTTAAG 1 cut(s) 971
BstAPI GCANNNNNTGC 1 cut(s) 62
BstDEI CTNAG 2 cut(s) 548, 678
BstDSI CCRYGG 2 cut(s) 176, 1308
BstF5I GGATG 3 cut(s) 234, 709, 1180
BstH2I RGCGCY 1 cut(s) 762
BstHHI GCGC 2 cut(s) 761, 1133
BstKTI GATC 9 cut(s) 83, 166, 307, 585, 687, 934, 1072, 1123, 1315
BstMAI GTCTC 3 cut(s) 567, 1032, 1042
BstMBI GATC 9 cut(s) 80, 163, 304, 582, 684, 931, 1069, 1120, 1312
BstMWI GCNNNNNNNGC 3 cut(s) 62, 521, 688
BstNI CCWGG 3 cut(s) 210, 918, 1252
BstNSI RCATGY 1 cut(s) 127
BstSCI CCNGG 5 cut(s) 208, 588, 761, 916, 1250
BstV1I GCAGC 4 cut(s) 49, 401, 506, 703
BstV2I GAAGAC 1 cut(s) 897
BstX2I RGATCY 4 cut(s) 163, 304, 582, 931
BstYI RGATCY 4 cut(s) 163, 304, 582, 931
BsuRI GGCC 2 cut(s) 181, 253
BtgI CCRYGG 2 cut(s) 176, 1308
BtrI CACGTC 1 cut(s) 775
BtsCI GGATG 3 cut(s) 234, 709, 1180
BtsIMutI CAGTG 5 cut(s) 393, 676, 822, 828, 837
BveI ACCTGC 1 cut(s) 1369
CaiI CAGNNNCTG 2 cut(s) 59, 395
CciI TCATGA 1 cut(s) 1044
CfoI GCGC 2 cut(s) 761, 1133
Cfr13I GGNCC 5 cut(s) 10, 206, 251, 614, 811
CseI GACGC 1 cut(s) 1034
CsiI ACCWGGT 1 cut(s) 916
Csp6I GTAC 3 cut(s) 1236, 1258, 1304
CspCI CAANNNNNGTGG 2 cut(s) 654, 689
CviAII CATG 7 cut(s) 124, 177, 609, 732, 1045, 1152, 1392
CviQI GTAC 3 cut(s) 1236, 1258, 1304
DdeI CTNAG 2 cut(s) 548, 678
DpnI GATC 9 cut(s) 82, 165, 306, 584, 686, 933, 1071, 1122, 1314
DpnII GATC 9 cut(s) 80, 163, 304, 582, 684, 931, 1069, 1120, 1312
DraIII CACNNNGTG 1 cut(s) 920
DriI GACNNNNNGTC 2 cut(s) 504, 817
EaeI YGGCCR 1 cut(s) 179
Eam1104I CTCTTC 3 cut(s) 237, 443, 624
Eam1105I GACNNNNNGTC 2 cut(s) 504, 817
EarI CTCTTC 3 cut(s) 237, 443, 624
Eco130I CCWWGG 4 cut(s) 176, 199, 275, 1137
Eco31I GGTCTC 1 cut(s) 1042
Eco32I GATATC 1 cut(s) 884
Eco47I GGWCC 4 cut(s) 10, 206, 614, 811
EcoO109I RGGNCCY 2 cut(s) 10, 614
EcoRI GAATTC 1 cut(s) 280
EcoRII CCWGG 3 cut(s) 208, 916, 1250
EcoRV GATATC 1 cut(s) 884
EcoT14I CCWWGG 4 cut(s) 176, 199, 275, 1137
ErhI CCWWGG 4 cut(s) 176, 199, 275, 1137
FaeI CATG 7 cut(s) 127, 180, 612, 735, 1048, 1155, 1395
FalI AAGNNNNNCTT 2 cut(s) 1107, 1139
FaqI GGGAC 1 cut(s) 1156
FatI CATG 7 cut(s) 123, 176, 608, 731, 1044, 1151, 1391
FbaI TGATCA 2 cut(s) 684, 1069
Fnu4HI GCNGC 4 cut(s) 63, 390, 495, 692
FokI GGATG 3 cut(s) 241, 716, 1187
Fsp4HI GCNGC 4 cut(s) 63, 390, 495, 692
FspBI CTAG 1 cut(s) 66
FspI TGCGCA 1 cut(s) 1132
GlaI GCGC 2 cut(s) 760, 1132
GluI GCNGC 4 cut(s) 63, 390, 495, 692
GsuI CTGGAG 3 cut(s) 231, 428, 1056
HaeII RGCGCY 1 cut(s) 762
HaeIII GGCC 2 cut(s) 181, 253
HapII CCGG 3 cut(s) 336, 590, 762
HgaI GACGC 1 cut(s) 1034
HhaI GCGC 2 cut(s) 761, 1133
Hin1II CATG 7 cut(s) 127, 180, 612, 735, 1048, 1155, 1395
Hin6I GCGC 2 cut(s) 759, 1131
HinP1I GCGC 2 cut(s) 759, 1131
HindIII AAGCTT 2 cut(s) 545, 968
HinfI GANTC 9 cut(s) 339, 451, 473, 499, 736, 800, 1179, 1245, 1282
HpaII CCGG 3 cut(s) 336, 590, 762
HphI GGTGA 3 cut(s) 731, 1240, 1350
Hpy166II GTNNAC 1 cut(s) 206
Hpy188I TCNGA 4 cut(s) 85, 110, 1012, 1194
Hpy188III TCNNGA 5 cut(s) 219, 445, 804, 935, 1045
Hpy8I GTNNAC 1 cut(s) 206
Hpy99I CGWCG 2 cut(s) 776, 1028
HpyAV CCTTC 2 cut(s) 527, 1277
HpyCH4III ACNGT 4 cut(s) 578, 671, 1220, 1356
HpyCH4IV ACGT 4 cut(s) 287, 630, 774, 1256
HpyCH4V TGCA 7 cut(s) 295, 494, 566, 722, 863, 1006, 1323
HpyF10VI GCNNNNNNNGC 3 cut(s) 62, 521, 688
HpyF3I CTNAG 2 cut(s) 548, 678
HpySE526I ACGT 4 cut(s) 287, 630, 774, 1256
Hsp92II CATG 7 cut(s) 127, 180, 612, 735, 1048, 1155, 1395
HspAI GCGC 2 cut(s) 759, 1131
Ksp22I TGATCA 2 cut(s) 684, 1069
Kzo9I GATC 9 cut(s) 80, 163, 304, 582, 684, 931, 1069, 1120, 1312
LmnI GCTCC 3 cut(s) 201, 1289, 1381
Lsp1109I GCAGC 4 cut(s) 49, 401, 506, 703
LweI GCATC 2 cut(s) 709, 1357
MabI ACCWGGT 1 cut(s) 916
MaeI CTAG 1 cut(s) 66
MaeII ACGT 4 cut(s) 287, 630, 774, 1256
MaeIII GTNAC 4 cut(s) 737, 767, 1096, 1356
MalI GATC 9 cut(s) 82, 165, 306, 584, 686, 933, 1071, 1122, 1314
MboI GATC 9 cut(s) 80, 163, 304, 582, 684, 931, 1069, 1120, 1312
MboII GAAGA 7 cut(s) 254, 460, 542, 605, 611, 728, 897
MflI RGATCY 4 cut(s) 163, 304, 582, 931
MlsI TGGCCA 1 cut(s) 181
MluNI TGGCCA 1 cut(s) 181
MlyI GAGTC 5 cut(s) 460, 482, 493, 745, 1173
MmeI TCCRAC 5 cut(s) 133, 310, 560, 1035, 1207
Mox20I TGGCCA 1 cut(s) 181
MscI TGGCCA 1 cut(s) 181
MseI TTAA 4 cut(s) 542, 699, 960, 972
Msp20I TGGCCA 1 cut(s) 181
MspA1I CMGCKG 1 cut(s) 682
MspCI CTTAAG 1 cut(s) 971
MspI CCGG 3 cut(s) 336, 590, 762
MspR9I CCNGG 5 cut(s) 210, 590, 763, 918, 1252
Mva1269I GAATGC 1 cut(s) 1008
MvaI CCWGG 3 cut(s) 210, 918, 1252
MwoI GCNNNNNNNGC 3 cut(s) 62, 521, 688
NciI CCSGG 2 cut(s) 590, 763
NcoI CCATGG 1 cut(s) 176
NdeII GATC 9 cut(s) 80, 163, 304, 582, 684, 931, 1069, 1120, 1312
NlaIII CATG 7 cut(s) 127, 180, 612, 735, 1048, 1155, 1395
NlaIV GGNNCC 7 cut(s) 12, 48, 165, 197, 334, 615, 813
NmuCI GTSAC 3 cut(s) 737, 1096, 1356
NsbI TGCGCA 1 cut(s) 1132
NspI RCATGY 1 cut(s) 127
PagI TCATGA 1 cut(s) 1044
PaqCI CACCTGC 1 cut(s) 1369
PciI ACATGT 1 cut(s) 123
PctI GAATGC 1 cut(s) 1008
PfeI GAWTC 4 cut(s) 339, 800, 1245, 1282
PkrI GCNGC 4 cut(s) 64, 391, 496, 693
PleI GAGTC 5 cut(s) 459, 481, 493, 744, 1173
PpsI GAGTC 5 cut(s) 459, 481, 493, 744, 1173
PpuMI RGGWCCY 2 cut(s) 10, 614
PscI ACATGT 1 cut(s) 123
Psp5II RGGWCCY 2 cut(s) 10, 614
Psp6I CCWGG 3 cut(s) 208, 916, 1250
PspGI CCWGG 3 cut(s) 208, 916, 1250
PspN4I GGNNCC 7 cut(s) 12, 48, 165, 197, 334, 615, 813
PspPI GGNCC 5 cut(s) 10, 206, 251, 614, 811
PspPPI RGGWCCY 2 cut(s) 10, 614
PstNI CAGNNNCTG 2 cut(s) 59, 395
PsuI RGATCY 4 cut(s) 163, 304, 582, 931
PvuII CAGCTG 1 cut(s) 682
RsaI GTAC 3 cut(s) 1237, 1259, 1305
RsaNI GTAC 3 cut(s) 1236, 1258, 1304
SaqAI TTAA 4 cut(s) 542, 699, 960, 972
SatI GCNGC 4 cut(s) 63, 390, 495, 692
Sau3AI GATC 9 cut(s) 80, 163, 304, 582, 684, 931, 1069, 1120, 1312
Sau96I GGNCC 5 cut(s) 10, 206, 251, 614, 811
SchI GAGTC 5 cut(s) 460, 482, 493, 745, 1173
ScrFI CCNGG 5 cut(s) 210, 590, 763, 918, 1252
SexAI ACCWGGT 1 cut(s) 916
SfaNI GCATC 2 cut(s) 709, 1357
SinI GGWCC 4 cut(s) 10, 206, 614, 811
SmlI CTYRAG 5 cut(s) 743, 866, 895, 971, 1166
SmoI CTYRAG 5 cut(s) 743, 866, 895, 971, 1166
SspMI CTAG 1 cut(s) 66
StyD4I CCNGG 5 cut(s) 208, 588, 761, 916, 1250
StyI CCWWGG 4 cut(s) 176, 199, 275, 1137
TaaI ACNGT 4 cut(s) 578, 671, 1220, 1356
TaiI ACGT 4 cut(s) 290, 633, 777, 1259
TaqI TCGA 1 cut(s) 1023
TatI WGTACW 1 cut(s) 1235
TfiI GAWTC 4 cut(s) 339, 800, 1245, 1282
Tru1I TTAA 4 cut(s) 542, 699, 960, 972
Tru9I TTAA 4 cut(s) 542, 699, 960, 972
TscAI CASTG 5 cut(s) 400, 676, 822, 828, 844
TseFI GTSAC 3 cut(s) 737, 1096, 1356
TseI GCWGC 4 cut(s) 62, 389, 494, 691
Tsp45I GTSAC 3 cut(s) 737, 1096, 1356
TspDTI ATGAA 5 cut(s) 451, 597, 720, 897, 1033
TspRI CASTG 5 cut(s) 400, 676, 822, 828, 844
Vha464I CTTAAG 1 cut(s) 971
VpaK11BI GGWCC 4 cut(s) 10, 206, 614, 811
XapI RAATTY 4 cut(s) 280, 488, 857, 889
XceI RCATGY 1 cut(s) 127
XcmI CCANNNNNNNNNTGG 2 cut(s) 189, 206
XspI CTAG 1 cut(s) 66
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.