RLG00000035090

Belongs to the peptidase S10 family

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr7
Physical Location & Seq
Reverse (-)
60634883 .. 60639247
4365 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000035090

Sequence Viewer

Length: 1380 bp
ATGGAAAAGCTCTATATACTTGTTCTTGTCTCTGTTCTCCTTTTGGTGCCAACAGCAACTGCTCCAGCAACCCAAGATGGGTCAGAGGACTGGGGCTATGTTGAAGTCAGACCCAAAGCCCACATGTTCTGGTGGCTTTATAGAAGTCCTAACAGAGTTGAGGATCCCTCAAAGCCATGGTCAACCATTCTCTGGCTCCAAGGTGGACCGGGAGCTTCAGGAGTTGGGATTGGGAACTTTGAAGAGGTTGGGCCATTGGACACCAATTTGAAGCCAAGGAATTCAACGTGGTTGCAAAAGGCAGATCTTTTATTTGTGGATAACCCAGTTGGAACCGGATTCAGTTTTGTGGAGGACAACGCTCTGTTTGTGAAAAATGATGTGGAGGCAGCCACTGATTTGACAACATTACTGAAAGAGCTATTCAACAGAAATGAGAGCCTCCAGAAGAGTCCTCTGTTCATTGTGGCAGAGTCTTATGGAGGCAAATTTGCAGTGACTCTTGGACTCTCAGCTCTAAAAGCCATTGAAGAAGGAACACTAAAGCTTAGACTTGGAGGTGTTGCATTGGGAGACAGTTGGATCTCCCCGGAAGATTTTGTGCTTTCATGGGGTCCTCTTCTTAAAGACGTTTCACGGATTGATGATAAGAGCTTGGAGAAATCAAACAGTGTGGCTCAGCTGATCAAGCAGCAGATTAAGGATGGGAAATTAGGAGATGCAACTAATTCATGGATGCTACTTGAGAGCCTCATCAGATCCGGGAGTAACGACGTGGATTTCTATAATTTTCTATTGGATGATTCAGGAATTGACCCATTGTCTTCTGTGACAACCACTGAAATGAATGTTGCACTGAAAAAATATACAAGATATCTAAATTCCTTAAGGAGGTCTTCATTAGCACCAGGTGGTAATGGAGATCTTGACACTTTGATGAATGGTGTCATTAAAAGGAAGCTTAAGATTATCCCAAACAATGTGACTTGGGGAATGCAGTCCGACAATGTCTTTGAAGCTATGTTCGGAGACTTCATGAGATCCAGAATTGATGAGGTTGATCAACTCCTTGCCAAAGGGGTCAACGTCACAGTATACAATGGGCAAGTTGATCTCATATGCGCAACCAAGGGGACTGAAGCATGGGTTGAAAAGCTCAAGTGGGATGGACTCCAACAATTTCTGAACGAGAGTAGAACCCCTCTCTACTGTGGGAATGATAGATTTACCAGAGGATTTACCAGGTCGTACAAAAACCTTTACTTCTATTGGATTCTTGGAGCAGGACACTTTGTACCTGTGGATCAGCCCTGCATTGCTTTGAATATGGTGGCTGATATTACACAGTCACCTGCTGCTGCTTCAGCTTCTCCACATTGA

Protein Analysis

460

Amino Acids

50.84

Weight (kDa)

5.12

Isoelectric Point (pI)

31.25

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Peptidase_S10 PF00450 25 - 447 4.2e-77 Serine carboxypeptidase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 1360
Acc16I TGCGCA 1 cut(s) 1123
Acc36I ACCTGC 1 cut(s) 1360
AccB1I GGYRCC 1 cut(s) 46
AccB7I CCANNNNNTGG 1 cut(s) 192
AccI GTMKAC 1 cut(s) 1095
AclWI GGATC 6 cut(s) 158, 171, 590, 753, 1035, 1311
AcsI RAATTY 3 cut(s) 280, 488, 880
AcuI CTGAAG 3 cut(s) 201, 1158, 1347
AdeI CACNNNGTG 1 cut(s) 911
AfaI GTAC 2 cut(s) 1250, 1296
AfiI CCNNNNNNNGG 3 cut(s) 78, 192, 891
AflII CTTAAG 2 cut(s) 886, 962
AflIII ACRYGT 1 cut(s) 123
AgsI TTSAA 9 cut(s) 104, 242, 271, 285, 427, 530, 1016, 1151, 1324
AhdI GACNNNNNGTC 1 cut(s) 820
AjiI CACGTC 1 cut(s) 775
AjnI CCWGG 2 cut(s) 907, 1241
Alw26I GTCTC 3 cut(s) 34, 567, 1023
AlwI GGATC 6 cut(s) 158, 171, 590, 753, 1035, 1311
AlwNI CAGNNNCTG 2 cut(s) 59, 395
AoxI GGCC 1 cut(s) 251
ApeKI GCWGC 4 cut(s) 389, 691, 1355, 1358
ApoI RAATTY 3 cut(s) 280, 488, 880
ArsI GACNNNNNNTTYG 4 cut(s) 164, 196, 995, 1027
AspLEI GCGC 1 cut(s) 1124
AspS9I GGNCC 3 cut(s) 206, 251, 614
AsuC2I CCSGG 3 cut(s) 210, 590, 763
AsuHPI GGTGA 1 cut(s) 1341
AvaII GGWCC 2 cut(s) 206, 614
BamHI GGATCC 1 cut(s) 163
BanI GGYRCC 1 cut(s) 46
BbsI GAAGAC 2 cut(s) 816, 888
BbvI GCAGC 4 cut(s) 401, 703, 1342, 1345
BccI CCATC 3 cut(s) 71, 698, 1160
BciT130I CCWGG 2 cut(s) 909, 1243
BclI TGATCA 2 cut(s) 684, 1060
BcnI CCSGG 3 cut(s) 210, 590, 763
BcoDI GTCTC 3 cut(s) 34, 567, 1023
BfrI CTTAAG 2 cut(s) 886, 962
BfuAI ACCTGC 1 cut(s) 1360
BglII AGATCT 2 cut(s) 304, 922
BisI GCNGC 4 cut(s) 390, 692, 1356, 1359
BlpI GCTNAGC 1 cut(s) 678
BlsI GCNGC 4 cut(s) 391, 693, 1357, 1360
Bme1390I CCNGG 5 cut(s) 210, 590, 763, 909, 1243
Bme18I GGWCC 2 cut(s) 206, 614
BmeRI GACNNNNNGTC 1 cut(s) 820
BmgBI CACGTC 1 cut(s) 775
BmgT120I GGNCC 3 cut(s) 206, 251, 614
BmiI GGNNCC 5 cut(s) 48, 165, 197, 334, 615
BmrFI CCNGG 5 cut(s) 210, 590, 763, 909, 1243
BmrI ACTGGG 2 cut(s) 100, 320
BmsI GCATC 2 cut(s) 709, 726
BmuI ACTGGG 2 cut(s) 100, 320
BpiI GAAGAC 2 cut(s) 816, 888
BplI GAGNNNNNCTC 2 cut(s) 152, 184
BpmI CTGGAG 2 cut(s) 48, 428
Bpu1102I GCTNAGC 1 cut(s) 678
BpuEI CTTGAG 2 cut(s) 764, 1142
BpuMI CCSGG 3 cut(s) 210, 590, 763
BsaJI CCNNGG 5 cut(s) 176, 199, 275, 588, 1128
BsaWI WCCGGW 1 cut(s) 335
Bsc4I CCNNNNNNNGG 3 cut(s) 78, 192, 891
Bse1I ACTGG 2 cut(s) 95, 326
Bse3DI GCAATG 1 cut(s) 1314
BseBI CCWGG 2 cut(s) 909, 1243
BseDI CCNNGG 5 cut(s) 176, 199, 275, 588, 1128
BseGI GGATG 4 cut(s) 709, 741, 805, 1171
BseLI CCNNNNNNNGG 3 cut(s) 78, 192, 891
BseMI GCAATG 1 cut(s) 1314
BseMII CTCAG 2 cut(s) 525, 692
BseNI ACTGG 2 cut(s) 95, 326
BseXI GCAGC 4 cut(s) 401, 703, 1342, 1345
BshFI GGCC 1 cut(s) 253
BshNI GGYRCC 1 cut(s) 46
BsiSI CCGG 4 cut(s) 209, 336, 590, 762
BslFI GGGAC 1 cut(s) 1147
BslI CCNNNNNNNGG 3 cut(s) 78, 192, 891
BsmAI GTCTC 3 cut(s) 34, 567, 1023
BsmFI GGGAC 1 cut(s) 1147
BsmI GAATGC 1 cut(s) 999
BsnI GGCC 1 cut(s) 253
Bsp1720I GCTNAGC 1 cut(s) 678
Bsp19I CCATGG 1 cut(s) 176
BspANI GGCC 1 cut(s) 253
BspCNI CTCAG 2 cut(s) 524, 691
BspHI TCATGA 1 cut(s) 1035
BspLI GGNNCC 5 cut(s) 48, 165, 197, 334, 615
BspMI ACCTGC 1 cut(s) 1360
BspPI GGATC 6 cut(s) 158, 171, 590, 753, 1035, 1311
BspT107I GGYRCC 1 cut(s) 46
BspTI CTTAAG 2 cut(s) 886, 962
BsrDI GCAATG 1 cut(s) 1314
BsrI ACTGG 2 cut(s) 95, 326
BssECI CCNNGG 5 cut(s) 176, 199, 275, 588, 1128
BssNAI GTATAC 1 cut(s) 1096
BssT1I CCWWGG 4 cut(s) 176, 199, 275, 1128
Bst1107I GTATAC 1 cut(s) 1096
Bst2UI CCWGG 2 cut(s) 909, 1243
Bst4CI ACNGT 5 cut(s) 578, 671, 1093, 1211, 1347
Bst6I CTCTTC 3 cut(s) 237, 443, 624
BstAFI CTTAAG 2 cut(s) 886, 962
BstDEI CTNAG 3 cut(s) 511, 548, 678
BstDSI CCRYGG 1 cut(s) 176
BstENI CCTNNNNNAGG 1 cut(s) 889
BstF5I GGATG 4 cut(s) 709, 741, 805, 1171
BstHHI GCGC 1 cut(s) 1124
BstMAI GTCTC 3 cut(s) 34, 567, 1023
BstMWI GCNNNNNNNGC 3 cut(s) 521, 688, 1364
BstNI CCWGG 2 cut(s) 909, 1243
BstNSI RCATGY 1 cut(s) 127
BstSCI CCNGG 5 cut(s) 208, 588, 761, 907, 1241
BstV1I GCAGC 4 cut(s) 401, 703, 1342, 1345
BstV2I GAAGAC 2 cut(s) 816, 888
BstX2I RGATCY 6 cut(s) 163, 304, 582, 758, 922, 1040
BstYI RGATCY 6 cut(s) 163, 304, 582, 758, 922, 1040
BstZ17I GTATAC 1 cut(s) 1096
BsuRI GGCC 1 cut(s) 253
BtgI CCRYGG 1 cut(s) 176
BtrI CACGTC 1 cut(s) 775
BtsCI GGATG 4 cut(s) 709, 741, 805, 1171
BtsI GCAGTG 1 cut(s) 501
BtsIMutI CAGTG 5 cut(s) 393, 501, 676, 837, 854
BveI ACCTGC 1 cut(s) 1360
CaiI CAGNNNCTG 2 cut(s) 59, 395
CciI TCATGA 1 cut(s) 1035
CfoI GCGC 1 cut(s) 1124
Cfr13I GGNCC 3 cut(s) 206, 251, 614
CsiI ACCWGGT 2 cut(s) 907, 1241
Csp6I GTAC 2 cut(s) 1249, 1295
CspCI CAANNNNNGTGG 2 cut(s) 654, 689
CviAII CATG 6 cut(s) 124, 177, 609, 732, 1036, 1143
CviQI GTAC 2 cut(s) 1249, 1295
DdeI CTNAG 3 cut(s) 511, 548, 678
DraIII CACNNNGTG 1 cut(s) 911
DriI GACNNNNNGTC 1 cut(s) 820
Eam1104I CTCTTC 3 cut(s) 237, 443, 624
Eam1105I GACNNNNNGTC 1 cut(s) 820
EarI CTCTTC 3 cut(s) 237, 443, 624
Eco130I CCWWGG 4 cut(s) 176, 199, 275, 1128
Eco32I GATATC 1 cut(s) 875
Eco47I GGWCC 2 cut(s) 206, 614
Eco57I CTGAAG 3 cut(s) 201, 1158, 1347
EcoNI CCTNNNNNAGG 1 cut(s) 889
EcoO109I RGGNCCY 1 cut(s) 614
EcoRI GAATTC 1 cut(s) 280
EcoRII CCWGG 2 cut(s) 907, 1241
EcoRV GATATC 1 cut(s) 875
EcoT14I CCWWGG 4 cut(s) 176, 199, 275, 1128
ErhI CCWWGG 4 cut(s) 176, 199, 275, 1128
FaeI CATG 6 cut(s) 127, 180, 612, 735, 1039, 1146
FalI AAGNNNNNCTT 2 cut(s) 880, 912
FaqI GGGAC 1 cut(s) 1147
FatI CATG 6 cut(s) 123, 176, 608, 731, 1035, 1142
FauNDI CATATG 1 cut(s) 1118
FbaI TGATCA 2 cut(s) 684, 1060
FblI GTMKAC 1 cut(s) 1095
Fnu4HI GCNGC 4 cut(s) 390, 692, 1356, 1359
FokI GGATG 4 cut(s) 716, 748, 812, 1178
Fsp4HI GCNGC 4 cut(s) 390, 692, 1356, 1359
FspI TGCGCA 1 cut(s) 1123
GlaI GCGC 1 cut(s) 1123
GluI GCNGC 4 cut(s) 390, 692, 1356, 1359
GsuI CTGGAG 2 cut(s) 48, 428
HaeIII GGCC 1 cut(s) 253
HapII CCGG 4 cut(s) 209, 336, 590, 762
HhaI GCGC 1 cut(s) 1124
Hin1II CATG 6 cut(s) 127, 180, 612, 735, 1039, 1146
Hin6I GCGC 1 cut(s) 1122
HinP1I GCGC 1 cut(s) 1122
HincII GTYRAC 2 cut(s) 183, 1084
HindII GTYRAC 2 cut(s) 183, 1084
HindIII AAGCTT 2 cut(s) 545, 959
HinfI GANTC 8 cut(s) 339, 451, 473, 499, 507, 803, 1170, 1273
HpaII CCGG 4 cut(s) 209, 336, 590, 762
HphI GGTGA 1 cut(s) 1341
Hpy166II GTNNAC 4 cut(s) 183, 206, 1084, 1096
Hpy188I TCNGA 6 cut(s) 85, 110, 758, 1003, 1028, 1185
Hpy188III TCNNGA 6 cut(s) 219, 445, 807, 926, 1036, 1044
Hpy8I GTNNAC 4 cut(s) 183, 206, 1084, 1096
Hpy99I CGWCG 1 cut(s) 776
HpyAV CCTTC 1 cut(s) 527
HpyCH4III ACNGT 5 cut(s) 578, 671, 1093, 1211, 1347
HpyCH4IV ACGT 4 cut(s) 287, 630, 774, 1086
HpyCH4V TGCA 7 cut(s) 295, 494, 566, 722, 854, 997, 1314
HpyF10VI GCNNNNNNNGC 3 cut(s) 521, 688, 1364
HpyF3I CTNAG 3 cut(s) 511, 548, 678
HpySE526I ACGT 4 cut(s) 287, 630, 774, 1086
Hsp92II CATG 6 cut(s) 127, 180, 612, 735, 1039, 1146
HspAI GCGC 1 cut(s) 1122
Ksp22I TGATCA 2 cut(s) 684, 1060
LmnI GCTCC 4 cut(s) 67, 201, 212, 1280
Lsp1109I GCAGC 4 cut(s) 401, 703, 1342, 1345
LweI GCATC 2 cut(s) 709, 726
MabI ACCWGGT 2 cut(s) 907, 1241
MaeII ACGT 4 cut(s) 287, 630, 774, 1086
MaeIII GTNAC 6 cut(s) 496, 767, 829, 982, 1087, 1347
MboII GAAGA 7 cut(s) 254, 460, 542, 605, 611, 816, 888
MflI RGATCY 6 cut(s) 163, 304, 582, 758, 922, 1040
MlyI GAGTC 5 cut(s) 460, 482, 493, 501, 1164
MmeI TCCRAC 4 cut(s) 310, 560, 1026, 1198
MseI TTAA 5 cut(s) 624, 699, 887, 951, 963
MslI CAYNNNNRTG 2 cut(s) 842, 935
MspA1I CMGCKG 1 cut(s) 682
MspCI CTTAAG 2 cut(s) 886, 962
MspI CCGG 4 cut(s) 209, 336, 590, 762
MspR9I CCNGG 5 cut(s) 210, 590, 763, 909, 1243
Mva1269I GAATGC 1 cut(s) 999
MvaI CCWGG 2 cut(s) 909, 1243
MwoI GCNNNNNNNGC 3 cut(s) 521, 688, 1364
NciI CCSGG 3 cut(s) 210, 590, 763
NcoI CCATGG 1 cut(s) 176
NdeI CATATG 1 cut(s) 1118
NlaIII CATG 6 cut(s) 127, 180, 612, 735, 1039, 1146
NlaIV GGNNCC 5 cut(s) 48, 165, 197, 334, 615
NmuCI GTSAC 5 cut(s) 496, 829, 982, 1087, 1347
NsbI TGCGCA 1 cut(s) 1123
NspI RCATGY 1 cut(s) 127
PagI TCATGA 1 cut(s) 1035
PaqCI CACCTGC 1 cut(s) 1360
PciI ACATGT 1 cut(s) 123
PctI GAATGC 1 cut(s) 999
PfeI GAWTC 3 cut(s) 339, 803, 1273
PflFI GACNNNGTC 1 cut(s) 1007
PflMI CCANNNNNTGG 1 cut(s) 192
PfoI TCCNGGA 1 cut(s) 761
PkrI GCNGC 4 cut(s) 391, 693, 1357, 1360
PleI GAGTC 5 cut(s) 459, 481, 493, 501, 1164
PpsI GAGTC 5 cut(s) 459, 481, 493, 501, 1164
PpuMI RGGWCCY 1 cut(s) 614
PscI ACATGT 1 cut(s) 123
Psp5II RGGWCCY 1 cut(s) 614
Psp6I CCWGG 2 cut(s) 907, 1241
PspGI CCWGG 2 cut(s) 907, 1241
PspN4I GGNNCC 5 cut(s) 48, 165, 197, 334, 615
PspPI GGNCC 3 cut(s) 206, 251, 614
PspPPI RGGWCCY 1 cut(s) 614
PstNI CAGNNNCTG 2 cut(s) 59, 395
PsuI RGATCY 6 cut(s) 163, 304, 582, 758, 922, 1040
PsyI GACNNNGTC 1 cut(s) 1007
PvuII CAGCTG 1 cut(s) 682
RsaI GTAC 2 cut(s) 1250, 1296
RsaNI GTAC 2 cut(s) 1249, 1295
RseI CAYNNNNRTG 2 cut(s) 842, 935
SaqAI TTAA 5 cut(s) 624, 699, 887, 951, 963
SatI GCNGC 4 cut(s) 390, 692, 1356, 1359
Sau96I GGNCC 3 cut(s) 206, 251, 614
SchI GAGTC 5 cut(s) 460, 482, 493, 501, 1164
ScrFI CCNGG 5 cut(s) 210, 590, 763, 909, 1243
SexAI ACCWGGT 2 cut(s) 907, 1241
SfaNI GCATC 2 cut(s) 709, 726
SinI GGWCC 2 cut(s) 206, 614
SmiMI CAYNNNNRTG 2 cut(s) 842, 935
SmlI CTYRAG 4 cut(s) 743, 886, 962, 1157
SmoI CTYRAG 4 cut(s) 743, 886, 962, 1157
StyD4I CCNGG 5 cut(s) 208, 588, 761, 907, 1241
StyI CCWWGG 4 cut(s) 176, 199, 275, 1128
TaaI ACNGT 5 cut(s) 578, 671, 1093, 1211, 1347
TaiI ACGT 4 cut(s) 290, 633, 777, 1089
TfiI GAWTC 3 cut(s) 339, 803, 1273
Tru1I TTAA 5 cut(s) 624, 699, 887, 951, 963
Tru9I TTAA 5 cut(s) 624, 699, 887, 951, 963
TscAI CASTG 5 cut(s) 400, 501, 676, 844, 861
TseFI GTSAC 5 cut(s) 496, 829, 982, 1087, 1347
TseI GCWGC 4 cut(s) 389, 691, 1355, 1358
Tsp45I GTSAC 5 cut(s) 496, 829, 982, 1087, 1347
TspDTI ATGAA 7 cut(s) 451, 597, 720, 860, 888, 953, 1024
TspGWI ACGGA 1 cut(s) 652
TspRI CASTG 5 cut(s) 400, 501, 676, 844, 861
Tth111I GACNNNGTC 1 cut(s) 1007
Van91I CCANNNNNTGG 1 cut(s) 192
Vha464I CTTAAG 2 cut(s) 886, 962
VpaK11BI GGWCC 2 cut(s) 206, 614
XagI CCTNNNNNAGG 1 cut(s) 889
XapI RAATTY 3 cut(s) 280, 488, 880
XceI RCATGY 1 cut(s) 127
XmiI GTMKAC 1 cut(s) 1095
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.