Prupe.1G228200_v2.0.a1

Belongs to the universal ribosomal protein uL22 family

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp01
Physical Location & Seq
Forward (+)
24135133 .. 24137907
2775 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.1G228200.1

Sequence Viewer

Length: 552 bp
ATGGTGAAGTACTCCAGGGAGCCCGACAATATCACCAAGTCCTGCAAAGCAAGGGGTTCTGACCTCAGAGTTCATTTCAAGAACACGAGGGAAACTGCATTTGCTATCAGAAAGTTGCCCCTAGTCAAGGCAAAGAGGTATTTGGAGGATGTTCTGGTCCACAAGCAGGCCATTCCCTTCCGCCGTTTCTGTCGTGGTGTTGGGCGTACTGCTCAGGCAAAGAACAGGCATTCCAATGGACAGGGACGCTGGCCTGTCAAATCTGCCAAGTTCATATTAGATTTGCTTAAGAATGCTGAGAGCAATGCTGAAGTGAAGGGTTTGGATGTTGATTCGCTAATTGTATCTCACATCCAAGTCAACCAAGCACAGAAGCAAAGGCGCAGAACCTACAGGGCTCACGGAAGAATCAACCCCTATATGTCATCCCCCTGCCATATTGAGCTGATTTTGGCCGAGAAGGAAGAGCCTGTCAAGAAAGAGCCTGAGAGCCAGTTGGCAACTAGCAAATCTAAGAAGTCTCAAGCTCTACGAAGCGGTGCTTCCTCGTAA

Protein Analysis

184

Amino Acids

20.79

Weight (kDa)

10.36

Isoelectric Point (pI)

63.41

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 2 cut(s) 181, 537
AcoI YGGCCR 1 cut(s) 453
AcuI CTGAAG 1 cut(s) 330
AfaI GTAC 2 cut(s) 11, 208
AfiI CCNNNNNNNGG 2 cut(s) 127, 166
AflII CTTAAG 1 cut(s) 287
AgsI TTSAA 1 cut(s) 79
AjnI CCWGG 1 cut(s) 14
AloI GAACNNNNNNTCC 2 cut(s) 215, 247
AluBI AGCT 2 cut(s) 445, 527
AluI AGCT 2 cut(s) 445, 527
Alw26I GTCTC 1 cut(s) 525
AoxI GGCC 3 cut(s) 168, 251, 453
AspLEI GCGC 1 cut(s) 384
AspS9I GGNCC 1 cut(s) 157
AsuHPI GGTGA 2 cut(s) 16, 25
AvaII GGWCC 1 cut(s) 157
BanII GRGCYC 2 cut(s) 24, 400
BauI CACGAG 1 cut(s) 85
BceAI ACGGC 1 cut(s) 168
BciT130I CCWGG 1 cut(s) 16
BcoDI GTCTC 1 cut(s) 525
BfaI CTAG 2 cut(s) 122, 504
BfmI CTRYAG 1 cut(s) 391
BfrI CTTAAG 1 cut(s) 287
BmcAI AGTACT 1 cut(s) 11
Bme1390I CCNGG 1 cut(s) 16
Bme18I GGWCC 1 cut(s) 157
BmgT120I GGNCC 1 cut(s) 157
BmiI GGNNCC 1 cut(s) 21
BmrFI CCNGG 1 cut(s) 16
Bpu10I CCTNAGC 1 cut(s) 213
BpuEI CTTGAG 1 cut(s) 507
BsaJI CCNNGG 1 cut(s) 15
Bsc4I CCNNNNNNNGG 2 cut(s) 127, 166
Bse1I ACTGG 1 cut(s) 493
Bse3DI GCAATG 1 cut(s) 310
BseBI CCWGG 1 cut(s) 16
BseDI CCNNGG 1 cut(s) 15
BseGI GGATG 4 cut(s) 154, 331, 351, 425
BseLI CCNNNNNNNGG 2 cut(s) 127, 166
BseMI GCAATG 1 cut(s) 310
BseMII CTCAG 4 cut(s) 79, 227, 288, 477
BseNI ACTGG 1 cut(s) 493
BshFI GGCC 3 cut(s) 170, 253, 455
BslFI GGGAC 1 cut(s) 258
BslI CCNNNNNNNGG 2 cut(s) 127, 166
BsmAI GTCTC 1 cut(s) 525
BsmFI GGGAC 1 cut(s) 258
BsmI GAATGC 2 cut(s) 229, 298
BsnI GGCC 3 cut(s) 170, 253, 455
Bsp1286I GDGCHC 2 cut(s) 24, 400
BspACI CCGC 2 cut(s) 181, 537
BspANI GGCC 3 cut(s) 170, 253, 455
BspCNI CTCAG 4 cut(s) 78, 226, 289, 478
BspLI GGNNCC 1 cut(s) 21
BspQI GCTCTTC 1 cut(s) 459
BspTI CTTAAG 1 cut(s) 287
BsrDI GCAATG 1 cut(s) 310
BsrI ACTGG 1 cut(s) 493
BssECI CCNNGG 1 cut(s) 15
BssSI CACGAG 1 cut(s) 85
Bst2BI CACGAG 1 cut(s) 85
Bst2UI CCWGG 1 cut(s) 16
Bst6I CTCTTC 1 cut(s) 459
BstAFI CTTAAG 1 cut(s) 287
BstC8I GCNNGC 2 cut(s) 168, 251
BstDEI CTNAG 5 cut(s) 65, 213, 297, 486, 513
BstENI CCTNNNNNAGG 1 cut(s) 125
BstF5I GGATG 4 cut(s) 154, 331, 351, 425
BstHHI GCGC 1 cut(s) 384
BstMAI GTCTC 1 cut(s) 525
BstNI CCWGG 1 cut(s) 16
BstSCI CCNGG 1 cut(s) 14
BstSFI CTRYAG 1 cut(s) 391
BsuRI GGCC 3 cut(s) 170, 253, 455
BtsCI GGATG 4 cut(s) 154, 331, 351, 425
Cac8I GCNNGC 2 cut(s) 168, 251
CfoI GCGC 1 cut(s) 384
Cfr13I GGNCC 1 cut(s) 157
CseI GACGC 1 cut(s) 255
Csp6I GTAC 2 cut(s) 10, 207
CviQI GTAC 2 cut(s) 10, 207
DdeI CTNAG 5 cut(s) 65, 213, 297, 486, 513
EaeI YGGCCR 1 cut(s) 453
Eam1104I CTCTTC 1 cut(s) 459
EarI CTCTTC 1 cut(s) 459
EciI GGCGGA 1 cut(s) 170
Eco24I GRGCYC 2 cut(s) 24, 400
Eco47I GGWCC 1 cut(s) 157
Eco57I CTGAAG 1 cut(s) 330
EcoNI CCTNNNNNAGG 1 cut(s) 125
EcoRII CCWGG 1 cut(s) 14
EcoT38I GRGCYC 2 cut(s) 24, 400
FaiI YATR 4 cut(s) 275, 420, 422, 438
FalI AAGNNNNNCTT 1 cut(s) 526
FaqI GGGAC 1 cut(s) 258
FokI GGATG 4 cut(s) 161, 338, 338, 412
FriOI GRGCYC 2 cut(s) 24, 400
FspBI CTAG 2 cut(s) 122, 504
GlaI GCGC 1 cut(s) 383
HaeIII GGCC 3 cut(s) 170, 253, 455
HgaI GACGC 1 cut(s) 255
HhaI GCGC 1 cut(s) 384
Hin6I GCGC 1 cut(s) 382
HinP1I GCGC 1 cut(s) 382
HincII GTYRAC 1 cut(s) 361
HindII GTYRAC 1 cut(s) 361
HinfI GANTC 2 cut(s) 332, 408
HphI GGTGA 2 cut(s) 16, 25
Hpy166II GTNNAC 2 cut(s) 160, 361
Hpy188I TCNGA 3 cut(s) 61, 68, 110
Hpy188III TCNNGA 2 cut(s) 79, 475
Hpy8I GTNNAC 2 cut(s) 160, 361
HpyAV CCTTC 3 cut(s) 187, 310, 454
HpyCH4V TGCA 2 cut(s) 45, 98
HpyF3I CTNAG 5 cut(s) 65, 213, 297, 486, 513
HspAI GCGC 1 cut(s) 382
LguI GCTCTTC 1 cut(s) 459
LmnI GCTCC 1 cut(s) 19
MaeI CTAG 2 cut(s) 122, 504
MboII GAAGA 2 cut(s) 417, 476
MhlI GDGCHC 2 cut(s) 24, 400
MluCI AATT 1 cut(s) 339
MnlI CCTC 4 cut(s) 74, 81, 129, 139
MseI TTAA 1 cut(s) 288
MslI CAYNNNNRTG 1 cut(s) 234
MspCI CTTAAG 1 cut(s) 287
MspR9I CCNGG 1 cut(s) 16
Mva1269I GAATGC 2 cut(s) 229, 298
MvaI CCWGG 1 cut(s) 16
NlaIV GGNNCC 1 cut(s) 21
NmeAIII GCCGAG 1 cut(s) 481
PciSI GCTCTTC 1 cut(s) 459
PctI GAATGC 2 cut(s) 229, 298
PfeI GAWTC 2 cut(s) 332, 408
Psp6I CCWGG 1 cut(s) 14
PspGI CCWGG 1 cut(s) 14
PspN4I GGNNCC 1 cut(s) 21
PspPI GGNCC 1 cut(s) 157
RsaI GTAC 2 cut(s) 11, 208
RsaNI GTAC 2 cut(s) 10, 207
RseI CAYNNNNRTG 1 cut(s) 234
SapI GCTCTTC 1 cut(s) 459
SaqAI TTAA 1 cut(s) 288
Sau96I GGNCC 1 cut(s) 157
ScaI AGTACT 1 cut(s) 11
ScrFI CCNGG 1 cut(s) 16
SduI GDGCHC 2 cut(s) 24, 400
SetI ASST 5 cut(s) 66, 140, 392, 447, 529
SfcI CTRYAG 1 cut(s) 391
SinI GGWCC 1 cut(s) 157
SmiMI CAYNNNNRTG 1 cut(s) 234
SmlI CTYRAG 2 cut(s) 287, 522
SmoI CTYRAG 2 cut(s) 287, 522
Sse9I AATT 1 cut(s) 339
SsiI CCGC 2 cut(s) 181, 537
SspMI CTAG 2 cut(s) 122, 504
StyD4I CCNGG 1 cut(s) 14
TasI AATT 1 cut(s) 339
TatI WGTACW 1 cut(s) 9
TfiI GAWTC 2 cut(s) 332, 408
Tru1I TTAA 1 cut(s) 288
Tru9I TTAA 1 cut(s) 288
TspDTI ATGAA 2 cut(s) 62, 262
TspGWI ACGGA 1 cut(s) 417
Vha464I CTTAAG 1 cut(s) 287
VpaK11BI GGWCC 1 cut(s) 157
XagI CCTNNNNNAGG 1 cut(s) 125
XspI CTAG 2 cut(s) 122, 504
ZrmI AGTACT 1 cut(s) 11
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.