Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp02

Orthogroup ID

OG0002187

Physical Location & Seq

Genomic Coordinates Forward (+)

3943572 .. 3946596

Gene Structure 3025 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.2G036500.4

Sequence Viewer

CDS Protein Promoter (2k)

Length: 915 bp

ATGTTGGGTCTCAGAGATATCCTCCTCATTGCTCCAACTCCTTCTTCCATGCACCAACAGAACCAACCCATTTCCTCTGACCTTCCCCTGCCTTCATCCACCACCCTTGGTGTTGGCCTTGGCATTTTCCCTCTTCTCACTGCCACCCCATGTGCTCCACATGCACCTACAACAGCTGAGGTTAATTCTGACAGTTCACATTTTTGGGGCCTCAGGAGATGCCAAGAATTGAACCCTTCTAAGCAAGACATGCTGAATTTTGGCAACCATGGTGCTCAACATGAACAGGTTGTGGAATGTGAAGGTCATAATAATAATAATGAAAATGAAGGTGGTGGTGGTGGTGGTGAGAGTTCTAAGATGAAGGCTTGCAAGGACTGTGGAAACAAGGCAAAGAAGGGTTGTGAGTACGGGAGGTGCAGGACTTGTTGCAGAGGACGCGGCTATGACTGCTCTACTCACGTGAAGAGCACCTGGGTCCCCGCGGCGAGGCGGCGAGAGCGGCAGATGGGGGTGACGGTTGCTGTTCCTGGTGTTGGTGGTGGTGGTGGTGGTGAAGGTTCTTCTGGGTCTTCTTCTGTTGCCAAAAGACCAAGAGTTGTGGTGCCATCACAGAATGCAAATGCTAATATCAAACAGTCGTTACCAGATAAAGTTCGTGCACCAGCAGTTTTCAGGTGCCACAGAGTCACTGCCATCAGTAATGGTGCAGCTGAGTTAGCCTATCAAGCGACGGTGAAAATTAGCGGGCATGTATTCCAGGGGTTGCTTTATGATCACGGGGTTGATAAGGACAATGCATTCCCATGTATTTCACCATCACACTTGGAAACTGATACAAACCAAAGGAATGGAGACTCTGCTTCAACTCCACCTCTTCCTCCAGCAACTGCCTGTCTGACTTCCACCAGCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DUF702

Protein Analysis

305

Amino Acids

31.98

Weight (kDa)

8.56

Isoelectric Point (pI)

54.5

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002187)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G54430
fragaria_vesca	FvH4_7g03110 FvH4_7g03110 FvH4_7g03110 FvH4_7g03110 FvH4_7g03110 FvH4_7g03110 FvH4_7g03110 FvH4_7g03110
malus_domestica	MD02G1285800.v1.1
prunus_persica	Prupe.2G036500_v2.0.a1 Prupe.2G036500_v2.0.a1 Prupe.2G036500_v2.0.a1 Prupe.2G036500_v2.0.a1
rosa_chinensis	RchiOBHm_Chr1g0319531 RchiOBHm_Chr1g0324311
rosa_laevigata	RLG00000008631 RLG00000017375 RLG00000030203 RLG00000033698
rosa_multiflora	Rmu_sc0004082.1_g000006 Rmu_sc0004082.1_g000019 Rmu_sc0004082.1_g000020
rosa_roxburghii	Rroxscaffold_159G00432690 Rroxscaffold_159G00432760 Rroxscaffold_159G00432820 Rroxscaffold_4G00325640 Rroxscaffold_4G00325700
rosa_rugosa	Rorug01G0045000 Rorug01G0045100 Rorug01G0045200 Rorug01G0045300 Rorug01G0045400 Rorug01G0045500
rosa_samantha	Rh1AG061000 Rh1BG052100 Rh1CG063200 Rh1DG067600 Rh6AG126800 Rh6CG264300 Rh7CG487400
rosa_wichuraiana	Rw1G005190 Rw4G000540

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	2 cut(s)	604, 678
AccBSI	CCGCTC	1 cut(s)	502
AccII	CGCG	2 cut(s)	441, 485
AciI	CCGC	6 cut(s)	441, 483, 485, 493, 502, 747
AcsI	RAATTY	1 cut(s)	256
AcvI	CACGTG	1 cut(s)	463
AfaI	GTAC	1 cut(s)	410
AfiI	CCNNNNNNNGG	2 cut(s)	489, 536
AgsI	TTSAA	2 cut(s)	232, 867
AjnI	CCWGG	3 cut(s)	473, 529, 759
AjuI	GAANNNNNNNTTGG	2 cut(s)	28, 60
AluBI	AGCT	3 cut(s)	176, 713, 912
AluI	AGCT	3 cut(s)	176, 713, 912
Alw21I	GWGCWC	4 cut(s)	157, 277, 473, 664
Alw26I	GTCTC	2 cut(s)	14, 849
Alw44I	GTGCAC	1 cut(s)	660
AlwNI	CAGNNNCTG	1 cut(s)	890
AoxI	GGCC	2 cut(s)	115, 208
ApaLI	GTGCAC	1 cut(s)	660
ApeKI	GCWGC	1 cut(s)	710
ApoI	RAATTY	1 cut(s)	256
AspS9I	GGNCC	2 cut(s)	208, 478
AsuHPI	GGTGA	5 cut(s)	359, 526, 566, 748, 807
AvaII	GGWCC	1 cut(s)	478
AxyI	CCTNAGG	1 cut(s)	212
BaeGI	GKGCMC	1 cut(s)	664
BanI	GGYRCC	2 cut(s)	604, 678
BbrPI	CACGTG	1 cut(s)	463
BbsI	GAAGAC	1 cut(s)	564
Bbv12I	GWGCWC	4 cut(s)	157, 277, 473, 664
BbvCI	CCTCAGC	1 cut(s)	177
BbvI	GCAGC	1 cut(s)	722
BccI	CCATC	4 cut(s)	502, 616, 704, 826
BciT130I	CCWGG	3 cut(s)	475, 531, 761
BclI	TGATCA	1 cut(s)	775
BcoDI	GTCTC	2 cut(s)	14, 849
BisI	GCNGC	5 cut(s)	442, 486, 494, 503, 711
BlsI	GCNGC	5 cut(s)	443, 487, 495, 504, 712
Bme1390I	CCNGG	3 cut(s)	475, 531, 761
Bme18I	GGWCC	1 cut(s)	478
BmgT120I	GGNCC	2 cut(s)	208, 478
BmiI	GGNNCC	5 cut(s)	209, 479, 480, 606, 680
BmrFI	CCNGG	3 cut(s)	475, 531, 761
BmsI	GCATC	1 cut(s)	209
BpiI	GAAGAC	1 cut(s)	564
BplI	GAGNNNNNCTC	1 cut(s)	38
BpmI	CTGGAG	1 cut(s)	867
Bpu10I	CCTNAGC	1 cut(s)	177
BsaAI	YACGTR	1 cut(s)	463
BsaI	GGTCTC	1 cut(s)	14
BsaJI	CCNNGG	6 cut(s)	106, 118, 268, 474, 483, 760
Bsc4I	CCNNNNNNNGG	2 cut(s)	489, 536
Bse21I	CCTNAGG	1 cut(s)	212
Bse3DI	GCAATG	1 cut(s)	27
BseBI	CCWGG	3 cut(s)	475, 531, 761
BseDI	CCNNGG	6 cut(s)	106, 118, 268, 474, 483, 760
BseGI	GGATG	1 cut(s)	95
BseLI	CCNNNNNNNGG	2 cut(s)	489, 536
BseMI	GCAATG	1 cut(s)	27
BseMII	CTCAG	4 cut(s)	25, 168, 226, 705
BseRI	GAGGAG	1 cut(s)	14
BseSI	GKGCMC	1 cut(s)	664
BseXI	GCAGC	1 cut(s)	722
BsgI	GTGCAG	2 cut(s)	439, 729
Bsh1236I	CGCG	2 cut(s)	441, 485
BshFI	GGCC	2 cut(s)	117, 210
BshNI	GGYRCC	2 cut(s)	604, 678
BsiHKAI	GWGCWC	4 cut(s)	157, 277, 473, 664
BslFI	GGGAC	1 cut(s)	464
BslI	CCNNNNNNNGG	2 cut(s)	489, 536
BsmAI	GTCTC	2 cut(s)	14, 849
BsmFI	GGGAC	1 cut(s)	464
BsmI	GAATGC	2 cut(s)	622, 800
BsnI	GGCC	2 cut(s)	117, 210
Bso31I	GGTCTC	1 cut(s)	14
Bsp1286I	GDGCHC	4 cut(s)	157, 277, 473, 664
Bsp143I	GATC	1 cut(s)	775
Bsp19I	CCATGG	1 cut(s)	268
BspACI	CCGC	6 cut(s)	441, 483, 485, 493, 502, 747
BspANI	GGCC	2 cut(s)	117, 210
BspCNI	CTCAG	4 cut(s)	24, 169, 225, 706
BspFNI	CGCG	2 cut(s)	441, 485
BspLI	GGNNCC	5 cut(s)	209, 479, 480, 606, 680
BspQI	GCTCTTC	1 cut(s)	461
BspT107I	GGYRCC	2 cut(s)	604, 678
BspTNI	GGTCTC	1 cut(s)	14
BsrBI	CCGCTC	1 cut(s)	502
BsrDI	GCAATG	1 cut(s)	27
BssECI	CCNNGG	6 cut(s)	106, 118, 268, 474, 483, 760
BssMI	GATC	1 cut(s)	775
BssT1I	CCWWGG	3 cut(s)	106, 118, 268
Bst2UI	CCWGG	3 cut(s)	475, 531, 761
Bst4CI	ACNGT	5 cut(s)	194, 380, 520, 639, 736
Bst6I	CTCTTC	3 cut(s)	138, 461, 882
BstAPI	GCANNNNNTGC	1 cut(s)	250
BstBAI	YACGTR	1 cut(s)	463
BstC8I	GCNNGC	2 cut(s)	370, 749
BstDEI	CTNAG	6 cut(s)	11, 177, 212, 240, 357, 714
BstDSI	CCRYGG	2 cut(s)	268, 483
BstF5I	GGATG	1 cut(s)	95
BstFNI	CGCG	2 cut(s)	441, 485
BstKTI	GATC	1 cut(s)	778
BstMAI	GTCTC	2 cut(s)	14, 849
BstMBI	GATC	1 cut(s)	775
BstMWI	GCNNNNNNNGC	8 cut(s)	161, 250, 438, 450, 499, 502, 719, 728
BstNI	CCWGG	3 cut(s)	475, 531, 761
BstNSI	RCATGY	3 cut(s)	164, 253, 755
BstSCI	CCNGG	3 cut(s)	473, 529, 759
BstSLI	GKGCMC	1 cut(s)	664
BstUI	CGCG	2 cut(s)	441, 485
BstV1I	GCAGC	1 cut(s)	722
BstV2I	GAAGAC	1 cut(s)	564
BstXI	CCANNNNNNTGG	1 cut(s)	851
Bsu36I	CCTNAGG	1 cut(s)	212
BsuRI	GGCC	2 cut(s)	117, 210
BtgI	CCRYGG	2 cut(s)	268, 483
BtsCI	GGATG	1 cut(s)	95
BtsI	GCAGTG	2 cut(s)	138, 690
BtsIMutI	CAGTG	2 cut(s)	138, 690
Cac8I	GCNNGC	2 cut(s)	370, 749
CaiI	CAGNNNCTG	1 cut(s)	890
Cfr13I	GGNCC	2 cut(s)	208, 478
Cfr42I	CCGCGG	1 cut(s)	486
CseI	GACGC	1 cut(s)	447
Csp6I	GTAC	1 cut(s)	409
CspCI	CAANNNNNGTGG	6 cut(s)	88, 123, 361, 396, 582, 617
CviAII	CATG	8 cut(s)	49, 150, 161, 250, 269, 281, 752, 807
CviJI	RGCY	8 cut(s)	117, 176, 210, 368, 444, 713, 722, 912
CviKI_1	RGCY	8 cut(s)	117, 176, 210, 368, 444, 713, 722, 912
CviQI	GTAC	1 cut(s)	409
DdeI	CTNAG	6 cut(s)	11, 177, 212, 240, 357, 714
DpnI	GATC	1 cut(s)	777
DpnII	GATC	1 cut(s)	775
Eam1104I	CTCTTC	3 cut(s)	138, 461, 882
EarI	CTCTTC	3 cut(s)	138, 461, 882
Eco130I	CCWWGG	3 cut(s)	106, 118, 268
Eco31I	GGTCTC	1 cut(s)	14
Eco32I	GATATC	1 cut(s)	19
Eco47I	GGWCC	1 cut(s)	478
Eco72I	CACGTG	1 cut(s)	463
Eco81I	CCTNAGG	1 cut(s)	212
EcoO109I	RGGNCCY	2 cut(s)	208, 478
EcoRII	CCWGG	3 cut(s)	473, 529, 759
EcoRV	GATATC	1 cut(s)	19
EcoT14I	CCWWGG	3 cut(s)	106, 118, 268
EcoT22I	ATGCAT	1 cut(s)	802
ErhI	CCWWGG	3 cut(s)	106, 118, 268
FaeI	CATG	8 cut(s)	52, 153, 164, 253, 272, 284, 755, 810
FaqI	GGGAC	1 cut(s)	464
FatI	CATG	8 cut(s)	48, 149, 160, 249, 268, 280, 751, 806
FauI	CCCGC	2 cut(s)	490, 740
FbaI	TGATCA	1 cut(s)	775
Fnu4HI	GCNGC	5 cut(s)	442, 486, 494, 503, 711
FokI	GGATG	1 cut(s)	82
Fsp4HI	GCNGC	5 cut(s)	442, 486, 494, 503, 711
GluI	GCNGC	5 cut(s)	442, 486, 494, 503, 711
GsuI	CTGGAG	1 cut(s)	867
HaeIII	GGCC	2 cut(s)	117, 210
HgaI	GACGC	1 cut(s)	447
Hin1II	CATG	8 cut(s)	52, 153, 164, 253, 272, 284, 755, 810
HinfI	GANTC	2 cut(s)	687, 857
HphI	GGTGA	5 cut(s)	359, 526, 566, 748, 807
Hpy166II	GTNNAC	2 cut(s)	197, 662
Hpy188I	TCNGA	4 cut(s)	14, 79, 190, 900
Hpy188III	TCNNGA	1 cut(s)	214
Hpy8I	GTNNAC	2 cut(s)	197, 662
Hpy99I	CGWCG	1 cut(s)	736
HpyAV	CCTTC	9 cut(s)	51, 92, 102, 246, 296, 323, 358, 391, 551
HpyCH4III	ACNGT	5 cut(s)	194, 380, 520, 639, 736
HpyCH4IV	ACGT	1 cut(s)	462
HpyCH4V	TGCA	9 cut(s)	52, 164, 372, 420, 432, 620, 662, 710, 800
HpyF10VI	GCNNNNNNNGC	8 cut(s)	161, 250, 438, 450, 499, 502, 719, 728
HpyF3I	CTNAG	6 cut(s)	11, 177, 212, 240, 357, 714
HpySE526I	ACGT	1 cut(s)	462
Hsp92II	CATG	8 cut(s)	52, 153, 164, 253, 272, 284, 755, 810
KflI	GGGWCCC	1 cut(s)	478
Ksp22I	TGATCA	1 cut(s)	775
KspI	CCGCGG	1 cut(s)	486
Kzo9I	GATC	1 cut(s)	775
LguI	GCTCTTC	1 cut(s)	461
LmnI	GCTCC	2 cut(s)	37, 160
Lsp1109I	GCAGC	1 cut(s)	722
LweI	GCATC	1 cut(s)	209
MaeII	ACGT	1 cut(s)	462
MaeIII	GTNAC	3 cut(s)	514, 642, 688
MalI	GATC	1 cut(s)	777
MbiI	CCGCTC	1 cut(s)	502
MboI	GATC	1 cut(s)	775
MboII	GAAGA	7 cut(s)	36, 125, 478, 555, 564, 567, 869
MhlI	GDGCHC	4 cut(s)	157, 277, 473, 664
MluCI	AATT	4 cut(s)	184, 227, 256, 741
MlyI	GAGTC	2 cut(s)	696, 851
MmeI	TCCRAC	1 cut(s)	59
Mph1103I	ATGCAT	1 cut(s)	802
MseI	TTAA	1 cut(s)	183
MslI	CAYNNNNRTG	1 cut(s)	805
MspA1I	CMGCKG	4 cut(s)	176, 485, 713, 912
MspR9I	CCNGG	3 cut(s)	475, 531, 761
Mva1269I	GAATGC	2 cut(s)	622, 800
MvaI	CCWGG	3 cut(s)	475, 531, 761
MvnI	CGCG	2 cut(s)	441, 485
MwoI	GCNNNNNNNGC	8 cut(s)	161, 250, 438, 450, 499, 502, 719, 728
NcoI	CCATGG	1 cut(s)	268
NdeII	GATC	1 cut(s)	775
NlaIII	CATG	8 cut(s)	52, 153, 164, 253, 272, 284, 755, 810
NlaIV	GGNNCC	5 cut(s)	209, 479, 480, 606, 680
NmuCI	GTSAC	2 cut(s)	514, 688
NsiI	ATGCAT	1 cut(s)	802
NspI	RCATGY	3 cut(s)	164, 253, 755
PciSI	GCTCTTC	1 cut(s)	461
PctI	GAATGC	2 cut(s)	622, 800
PkrI	GCNGC	5 cut(s)	443, 487, 495, 504, 712
PleI	GAGTC	2 cut(s)	695, 851
PmaCI	CACGTG	1 cut(s)	463
PmlI	CACGTG	1 cut(s)	463
PpsI	GAGTC	2 cut(s)	695, 851
Ppu21I	YACGTR	1 cut(s)	463
PpuMI	RGGWCCY	1 cut(s)	478
Psp5II	RGGWCCY	1 cut(s)	478
Psp6I	CCWGG	3 cut(s)	473, 529, 759
PspCI	CACGTG	1 cut(s)	463
PspGI	CCWGG	3 cut(s)	473, 529, 759
PspN4I	GGNNCC	5 cut(s)	209, 479, 480, 606, 680
PspPI	GGNCC	2 cut(s)	208, 478
PspPPI	RGGWCCY	1 cut(s)	478
PstNI	CAGNNNCTG	1 cut(s)	890
PvuII	CAGCTG	3 cut(s)	176, 713, 912
RsaI	GTAC	1 cut(s)	410
RsaNI	GTAC	1 cut(s)	409
RseI	CAYNNNNRTG	1 cut(s)	805
SacII	CCGCGG	1 cut(s)	486
SapI	GCTCTTC	1 cut(s)	461
SaqAI	TTAA	1 cut(s)	183
SatI	GCNGC	5 cut(s)	442, 486, 494, 503, 711
Sau3AI	GATC	1 cut(s)	775
Sau96I	GGNCC	2 cut(s)	208, 478
SchI	GAGTC	2 cut(s)	696, 851
ScrFI	CCNGG	3 cut(s)	475, 531, 761
SduI	GDGCHC	4 cut(s)	157, 277, 473, 664
SfaNI	GCATC	1 cut(s)	209
Sfr303I	CCGCGG	1 cut(s)	486
SgrBI	CCGCGG	1 cut(s)	486
SinI	GGWCC	1 cut(s)	478
SmiMI	CAYNNNNRTG	1 cut(s)	805
Sse9I	AATT	4 cut(s)	184, 227, 256, 741
SsiI	CCGC	6 cut(s)	441, 483, 485, 493, 502, 747
StyD4I	CCNGG	3 cut(s)	473, 529, 759
StyI	CCWWGG	3 cut(s)	106, 118, 268
TaaI	ACNGT	5 cut(s)	194, 380, 520, 639, 736
TaiI	ACGT	1 cut(s)	465
TasI	AATT	4 cut(s)	184, 227, 256, 741
TauI	GCSGC	4 cut(s)	444, 488, 496, 505
Tru1I	TTAA	1 cut(s)	183
Tru9I	TTAA	1 cut(s)	183
TscAI	CASTG	2 cut(s)	145, 697
TseFI	GTSAC	2 cut(s)	514, 688
TseI	GCWGC	1 cut(s)	710
Tsp45I	GTSAC	2 cut(s)	514, 688
TspDTI	ATGAA	5 cut(s)	84, 297, 336, 342, 377
TspRI	CASTG	2 cut(s)	145, 697
VneI	GTGCAC	1 cut(s)	660
VpaK11BI	GGWCC	1 cut(s)	478
XapI	RAATTY	1 cut(s)	256
XceI	RCATGY	3 cut(s)	164, 253, 755
Zsp2I	ATGCAT	1 cut(s)	802

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.