Protein LATERAL ROOT PRIMORDIUM
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G54430 |
| fragaria_vesca | FvH4_7g03110 FvH4_7g03110 FvH4_7g03110 FvH4_7g03110 FvH4_7g03110 FvH4_7g03110 FvH4_7g03110 FvH4_7g03110 |
| malus_domestica | MD02G1285800.v1.1 |
| prunus_persica | Prupe.2G036500_v2.0.a1 Prupe.2G036500_v2.0.a1 Prupe.2G036500_v2.0.a1 Prupe.2G036500_v2.0.a1 |
| rosa_chinensis | RchiOBHm_Chr1g0319531 RchiOBHm_Chr1g0324311 |
| rosa_laevigata | RLG00000008631 RLG00000017375 RLG00000030203 RLG00000033698 |
| rosa_multiflora | Rmu_sc0004082.1_g000006 Rmu_sc0004082.1_g000019 Rmu_sc0004082.1_g000020 |
| rosa_roxburghii | Rroxscaffold_159G00432690 Rroxscaffold_159G00432760 Rroxscaffold_159G00432820 Rroxscaffold_4G00325640 Rroxscaffold_4G00325700 |
| rosa_rugosa | Rorug01G0045000 Rorug01G0045100 Rorug01G0045200 Rorug01G0045300 Rorug01G0045400 Rorug01G0045500 |
| rosa_samantha | Rh1AG061000 Rh1BG052100 Rh1CG063200 Rh1DG067600 Rh6AG126800 Rh6CG264300 Rh7CG487400 |
| rosa_wichuraiana | Rw1G005190 Rw4G000540 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 1701 |
| AccB1I | GGYRCC | 1 cut(s) | 2053 |
| AccB7I | CCANNNNNTGG | 2 cut(s) | 489, 871 |
| AccI | GTMKAC | 3 cut(s) | 169, 1132, 1555 |
| AccII | CGCG | 1 cut(s) | 1709 |
| AciI | CCGC | 4 cut(s) | 720, 1640, 1707, 1709 |
| AclWI | GGATC | 6 cut(s) | 836, 865, 1228, 1340, 1735, 1894 |
| AcoI | YGGCCR | 2 cut(s) | 592, 1641 |
| AcsI | RAATTY | 7 cut(s) | 432, 517, 1434, 1681, 1715, 1955, 1990 |
| AcuI | CTGAAG | 3 cut(s) | 1020, 1548, 2079 |
| AcvI | CACGTG | 1 cut(s) | 1421 |
| AfaI | GTAC | 6 cut(s) | 113, 828, 928, 973, 1018, 2139 |
| AfiI | CCNNNNNNNGG | 5 cut(s) | 271, 489, 742, 871, 1915 |
| AflIII | ACRYGT | 1 cut(s) | 2146 |
| AgsI | TTSAA | 9 cut(s) | 238, 335, 367, 457, 804, 1233, 1954, 2074, 2083 |
| AjnI | CCWGG | 3 cut(s) | 21, 114, 1471 |
| Alw21I | GWGCWC | 2 cut(s) | 19, 550 |
| Alw26I | GTCTC | 3 cut(s) | 159, 307, 1638 |
| AlwI | GGATC | 6 cut(s) | 836, 865, 1228, 1340, 1735, 1894 |
| AlwNI | CAGNNNCTG | 2 cut(s) | 1877, 1925 |
| Ama87I | CYCGRG | 2 cut(s) | 918, 1762 |
| AoxI | GGCC | 5 cut(s) | 437, 592, 1641, 1981, 2004 |
| ApoI | RAATTY | 7 cut(s) | 432, 517, 1434, 1681, 1715, 1955, 1990 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 452, 484 |
| AseI | ATTAAT | 1 cut(s) | 1076 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 1046 |
| AspLEI | GCGC | 1 cut(s) | 1396 |
| AspS9I | GGNCC | 3 cut(s) | 473, 914, 1424 |
| AsuC2I | CCSGG | 6 cut(s) | 266, 625, 815, 1123, 1763, 1764 |
| AsuHPI | GGTGA | 4 cut(s) | 138, 149, 734, 1491 |
| AsuNHI | GCTAGC | 1 cut(s) | 284 |
| AvaI | CYCGRG | 2 cut(s) | 918, 1762 |
| AvaII | GGWCC | 3 cut(s) | 473, 914, 1424 |
| BaeGI | GKGCMC | 1 cut(s) | 1471 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 1008, 1041 |
| BalI | TGGCCA | 1 cut(s) | 594 |
| BanI | GGYRCC | 1 cut(s) | 2053 |
| BanII | GRGCYC | 1 cut(s) | 19 |
| BauI | CACGAG | 1 cut(s) | 1350 |
| BbrPI | CACGTG | 1 cut(s) | 1421 |
| BbsI | GAAGAC | 3 cut(s) | 1536, 1797, 2099 |
| Bbv12I | GWGCWC | 2 cut(s) | 19, 550 |
| BbvCI | CCTCAGC | 1 cut(s) | 691 |
| BccI | CCATC | 7 cut(s) | 89, 168, 458, 773, 1196, 1652, 1918 |
| BcgI | CGANNNNNNTGC | 4 cut(s) | 64, 98, 755, 789 |
| BciT130I | CCWGG | 3 cut(s) | 23, 116, 1473 |
| BciVI | GTATCC | 1 cut(s) | 876 |
| BclI | TGATCA | 2 cut(s) | 1314, 1897 |
| BcnI | CCSGG | 6 cut(s) | 266, 625, 815, 1123, 1763, 1764 |
| BcoDI | GTCTC | 3 cut(s) | 159, 307, 1638 |
| BfaI | CTAG | 5 cut(s) | 164, 173, 285, 924, 1109 |
| BfmI | CTRYAG | 6 cut(s) | 738, 833, 975, 1665, 1755, 1869 |
| BfuI | GTATCC | 1 cut(s) | 876 |
| BglII | AGATCT | 1 cut(s) | 344 |
| BmcAI | AGTACT | 1 cut(s) | 973 |
| Bme1390I | CCNGG | 9 cut(s) | 23, 116, 266, 625, 815, 1123, 1473, 1763, 1764 |
| Bme18I | GGWCC | 3 cut(s) | 473, 914, 1424 |
| BmeT110I | CYCGRG | 2 cut(s) | 918, 1762 |
| BmgT120I | GGNCC | 3 cut(s) | 473, 914, 1424 |
| BmiI | GGNNCC | 2 cut(s) | 1567, 2055 |
| BmrFI | CCNGG | 9 cut(s) | 23, 116, 266, 625, 815, 1123, 1473, 1763, 1764 |
| BmrI | ACTGGG | 3 cut(s) | 1068, 1235, 1258 |
| BmsI | GCATC | 6 cut(s) | 722, 757, 1081, 1108, 1375, 2165 |
| BmtI | GCTAGC | 1 cut(s) | 288 |
| BmuI | ACTGGG | 3 cut(s) | 1068, 1235, 1258 |
| BpiI | GAAGAC | 3 cut(s) | 1536, 1797, 2099 |
| BplI | GAGNNNNNCTC | 4 cut(s) | 128, 160, 179, 211 |
| BpmI | CTGGAG | 2 cut(s) | 5, 1620 |
| Bpu10I | CCTNAGC | 1 cut(s) | 691 |
| BpuEI | CTTGAG | 1 cut(s) | 79 |
| BpuMI | CCSGG | 6 cut(s) | 266, 625, 815, 1123, 1763, 1764 |
| Bsa29I | ATCGAT | 1 cut(s) | 84 |
| BsaAI | YACGTR | 1 cut(s) | 1421 |
| BsaBI | GATNNNNATC | 1 cut(s) | 2204 |
| BsaI | GGTCTC | 1 cut(s) | 1638 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 1319, 1349, 1657, 1687 |
| Bsc4I | CCNNNNNNNGG | 5 cut(s) | 271, 489, 742, 871, 1915 |
| Bse118I | RCCGGY | 1 cut(s) | 2018 |
| Bse1I | ACTGG | 6 cut(s) | 1063, 1230, 1253, 1597, 1830, 2166 |
| Bse3DI | GCAATG | 2 cut(s) | 669, 876 |
| Bse8I | GATNNNNATC | 1 cut(s) | 2204 |
| BseBI | CCWGG | 3 cut(s) | 23, 116, 1473 |
| BseCI | ATCGAT | 1 cut(s) | 84 |
| BseGI | GGATG | 7 cut(s) | 563, 589, 646, 737, 823, 1258, 2205 |
| BseJI | GATNNNNATC | 1 cut(s) | 2204 |
| BseLI | CCNNNNNNNGG | 5 cut(s) | 271, 489, 742, 871, 1915 |
| BseMI | GCAATG | 2 cut(s) | 669, 876 |
| BseMII | CTCAG | 3 cut(s) | 561, 705, 1283 |
| BseNI | ACTGG | 6 cut(s) | 1063, 1230, 1253, 1597, 1830, 2166 |
| BseRI | GAGGAG | 3 cut(s) | 468, 693, 696 |
| BseSI | GKGCMC | 1 cut(s) | 1471 |
| Bsh1236I | CGCG | 1 cut(s) | 1709 |
| BshFI | GGCC | 5 cut(s) | 439, 594, 1643, 1983, 2006 |
| BshNI | GGYRCC | 1 cut(s) | 2053 |
| BshVI | ATCGAT | 1 cut(s) | 84 |
| BsiHKAI | GWGCWC | 2 cut(s) | 19, 550 |
| BsiHKCI | CYCGRG | 2 cut(s) | 918, 1762 |
| BsiSI | CCGG | 6 cut(s) | 265, 624, 815, 1123, 1763, 2019 |
| BslFI | GGGAC | 3 cut(s) | 365, 640, 1075 |
| BslI | CCNNNNNNNGG | 5 cut(s) | 271, 489, 742, 871, 1915 |
| BsmAI | GTCTC | 3 cut(s) | 159, 307, 1638 |
| BsmFI | GGGAC | 3 cut(s) | 365, 640, 1075 |
| BsnI | GGCC | 5 cut(s) | 439, 594, 1643, 1983, 2006 |
| Bso31I | GGTCTC | 1 cut(s) | 1638 |
| BsoBI | CYCGRG | 2 cut(s) | 918, 1762 |
| Bsp1286I | GDGCHC | 3 cut(s) | 19, 550, 1471 |
| Bsp19I | CCATGG | 1 cut(s) | 595 |
| BspACI | CCGC | 4 cut(s) | 720, 1640, 1707, 1709 |
| BspANI | GGCC | 5 cut(s) | 439, 594, 1643, 1983, 2006 |
| BspCNI | CTCAG | 3 cut(s) | 562, 704, 1284 |
| BspDI | ATCGAT | 1 cut(s) | 84 |
| BspFNI | CGCG | 1 cut(s) | 1709 |
| BspLI | GGNNCC | 2 cut(s) | 1567, 2055 |
| BspMAI | CTGCAG | 1 cut(s) | 837 |
| BspOI | GCTAGC | 1 cut(s) | 288 |
| BspPI | GGATC | 6 cut(s) | 836, 865, 1228, 1340, 1735, 1894 |
| BspT107I | GGYRCC | 1 cut(s) | 2053 |
| BspTNI | GGTCTC | 1 cut(s) | 1638 |
| BsrDI | GCAATG | 2 cut(s) | 669, 876 |
| BsrFI | RCCGGY | 1 cut(s) | 2018 |
| BsrI | ACTGG | 6 cut(s) | 1063, 1230, 1253, 1597, 1830, 2166 |
| BssAI | RCCGGY | 1 cut(s) | 2018 |
| BssNAI | GTATAC | 3 cut(s) | 170, 1133, 1556 |
| BssSI | CACGAG | 1 cut(s) | 1350 |
| BssT1I | CCWWGG | 3 cut(s) | 595, 664, 727 |
| Bst1107I | GTATAC | 3 cut(s) | 170, 1133, 1556 |
| Bst2BI | CACGAG | 1 cut(s) | 1350 |
| Bst2UI | CCWGG | 3 cut(s) | 23, 116, 1473 |
| Bst4CI | ACNGT | 8 cut(s) | 392, 826, 948, 961, 1024, 1151, 1553, 2110 |
| Bst6I | CTCTTC | 2 cut(s) | 1420, 2082 |
| BstBAI | YACGTR | 1 cut(s) | 1421 |
| BstC8I | GCNNGC | 5 cut(s) | 282, 286, 904, 1917, 2020 |
| BstDEI | CTNAG | 5 cut(s) | 570, 691, 1144, 1292, 1785 |
| BstDSI | CCRYGG | 4 cut(s) | 595, 947, 1150, 1707 |
| BstEII | GGTNACC | 1 cut(s) | 722 |
| BstF5I | GGATG | 7 cut(s) | 563, 589, 646, 737, 823, 1258, 2205 |
| BstFNI | CGCG | 1 cut(s) | 1709 |
| BstHHI | GCGC | 1 cut(s) | 1396 |
| BstMAI | GTCTC | 3 cut(s) | 159, 307, 1638 |
| BstMWI | GCNNNNNNNGC | 8 cut(s) | 617, 629, 701, 752, 1280, 1487, 1718, 1872 |
| BstNI | CCWGG | 3 cut(s) | 23, 116, 1473 |
| BstNSI | RCATGY | 2 cut(s) | 1544, 2150 |
| BstPI | GGTNACC | 1 cut(s) | 722 |
| BstSCI | CCNGG | 9 cut(s) | 21, 114, 264, 623, 813, 1121, 1471, 1761, 1762 |
| BstSFI | CTRYAG | 6 cut(s) | 738, 833, 975, 1665, 1755, 1869 |
| BstSLI | GKGCMC | 1 cut(s) | 1471 |
| BstUI | CGCG | 1 cut(s) | 1709 |
| BstV2I | GAAGAC | 3 cut(s) | 1536, 1797, 2099 |
| BstX2I | RGATCY | 5 cut(s) | 344, 857, 1345, 1727, 1886 |
| BstXI | CCANNNNNNTGG | 2 cut(s) | 1058, 1592 |
| BstYI | RGATCY | 5 cut(s) | 344, 857, 1345, 1727, 1886 |
| BstZ17I | GTATAC | 3 cut(s) | 170, 1133, 1556 |
| Bsu15I | ATCGAT | 1 cut(s) | 84 |
| BsuI | GTATCC | 1 cut(s) | 876 |
| BsuRI | GGCC | 5 cut(s) | 439, 594, 1643, 1983, 2006 |
| BsuTUI | ATCGAT | 1 cut(s) | 84 |
| BtgI | CCRYGG | 4 cut(s) | 595, 947, 1150, 1707 |
| BtgZI | GCGATG | 1 cut(s) | 1896 |
| BtsCI | GGATG | 7 cut(s) | 563, 589, 646, 737, 823, 1258, 2205 |
| BtsI | GCAGTG | 1 cut(s) | 606 |
| BtsIMutI | CAGTG | 9 cut(s) | 258, 397, 606, 1029, 1044, 1223, 1590, 1837, 2159 |
| Cac8I | GCNNGC | 5 cut(s) | 282, 286, 904, 1917, 2020 |
| CaiI | CAGNNNCTG | 2 cut(s) | 1877, 1925 |
| CfoI | GCGC | 1 cut(s) | 1396 |
| Cfr10I | RCCGGY | 1 cut(s) | 2018 |
| Cfr13I | GGNCC | 3 cut(s) | 473, 914, 1424 |
| Cfr42I | CCGCGG | 1 cut(s) | 1710 |
| Cfr9I | CCCGGG | 1 cut(s) | 1762 |
| ClaI | ATCGAT | 1 cut(s) | 84 |
| Csp6I | GTAC | 6 cut(s) | 112, 827, 927, 972, 1017, 2138 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 1610, 1645 |
| CviQI | GTAC | 6 cut(s) | 112, 827, 927, 972, 1017, 2138 |
| DdeI | CTNAG | 5 cut(s) | 570, 691, 1144, 1292, 1785 |
| EaeI | YGGCCR | 2 cut(s) | 592, 1641 |
| Eam1104I | CTCTTC | 2 cut(s) | 1420, 2082 |
| EarI | CTCTTC | 2 cut(s) | 1420, 2082 |
| Ecl136II | GAGCTC | 1 cut(s) | 17 |
| Eco130I | CCWWGG | 3 cut(s) | 595, 664, 727 |
| Eco24I | GRGCYC | 1 cut(s) | 19 |
| Eco31I | GGTCTC | 1 cut(s) | 1638 |
| Eco32I | GATATC | 2 cut(s) | 406, 790 |
| Eco47I | GGWCC | 3 cut(s) | 473, 914, 1424 |
| Eco53kI | GAGCTC | 1 cut(s) | 17 |
| Eco57I | CTGAAG | 3 cut(s) | 1020, 1548, 2079 |
| Eco72I | CACGTG | 1 cut(s) | 1421 |
| Eco88I | CYCGRG | 2 cut(s) | 918, 1762 |
| Eco91I | GGTNACC | 1 cut(s) | 722 |
| EcoICRI | GAGCTC | 1 cut(s) | 17 |
| EcoO65I | GGTNACC | 1 cut(s) | 722 |
| EcoRII | CCWGG | 3 cut(s) | 21, 114, 1471 |
| EcoRV | GATATC | 2 cut(s) | 406, 790 |
| EcoT14I | CCWWGG | 3 cut(s) | 595, 664, 727 |
| EcoT38I | GRGCYC | 1 cut(s) | 19 |
| ErhI | CCWWGG | 3 cut(s) | 595, 664, 727 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 307, 339, 870, 902 |
| FaqI | GGGAC | 3 cut(s) | 365, 640, 1075 |
| FauNDI | CATATG | 2 cut(s) | 1192, 1606 |
| FbaI | TGATCA | 2 cut(s) | 1314, 1897 |
| FblI | GTMKAC | 3 cut(s) | 169, 1132, 1555 |
| FokI | GGATG | 7 cut(s) | 550, 596, 653, 744, 830, 1265, 2192 |
| FriOI | GRGCYC | 1 cut(s) | 19 |
| FspBI | CTAG | 5 cut(s) | 164, 173, 285, 924, 1109 |
| GlaI | GCGC | 1 cut(s) | 1395 |
| GsuI | CTGGAG | 2 cut(s) | 5, 1620 |
| HaeIII | GGCC | 5 cut(s) | 439, 594, 1643, 1983, 2006 |
| HapII | CCGG | 6 cut(s) | 265, 624, 815, 1123, 1763, 2019 |
| HhaI | GCGC | 1 cut(s) | 1396 |
| Hin6I | GCGC | 1 cut(s) | 1394 |
| HinP1I | GCGC | 1 cut(s) | 1394 |
| HincII | GTYRAC | 1 cut(s) | 1246 |
| HindII | GTYRAC | 1 cut(s) | 1246 |
| HindIII | AAGCTT | 1 cut(s) | 1779 |
| HinfI | GANTC | 9 cut(s) | 425, 443, 572, 714, 987, 1187, 1259, 2179, 2200 |
| HpaII | CCGG | 6 cut(s) | 265, 624, 815, 1123, 1763, 2019 |
| HphI | GGTGA | 4 cut(s) | 138, 149, 734, 1491 |
| Hpy166II | GTNNAC | 8 cut(s) | 112, 170, 1042, 1133, 1246, 1357, 1424, 1556 |
| Hpy188I | TCNGA | 7 cut(s) | 448, 571, 1293, 1879, 2131, 2173, 2199 |
| Hpy188III | TCNNGA | 7 cut(s) | 128, 187, 429, 1218, 1563, 1731, 1848 |
| Hpy8I | GTNNAC | 8 cut(s) | 112, 170, 1042, 1133, 1246, 1357, 1424, 1556 |
| HpyAV | CCTTC | 3 cut(s) | 1286, 1420, 2080 |
| HpyCH4III | ACNGT | 8 cut(s) | 392, 826, 948, 961, 1024, 1151, 1553, 2110 |
| HpyCH4IV | ACGT | 1 cut(s) | 1420 |
| HpyF10VI | GCNNNNNNNGC | 8 cut(s) | 617, 629, 701, 752, 1280, 1487, 1718, 1872 |
| HpyF3I | CTNAG | 5 cut(s) | 570, 691, 1144, 1292, 1785 |
| HpySE526I | ACGT | 1 cut(s) | 1420 |
| HspAI | GCGC | 1 cut(s) | 1394 |
| KroI | GCCGGC | 1 cut(s) | 2018 |
| KroNI | GCCGGC | 1 cut(s) | 2020 |
| Ksp22I | TGATCA | 2 cut(s) | 1314, 1897 |
| KspI | CCGCGG | 1 cut(s) | 1710 |
| LmnI | GCTCC | 1 cut(s) | 105 |
| LweI | GCATC | 6 cut(s) | 722, 757, 1081, 1108, 1375, 2165 |
| MaeI | CTAG | 5 cut(s) | 164, 173, 285, 924, 1109 |
| MaeII | ACGT | 1 cut(s) | 1420 |
| MaeIII | GTNAC | 9 cut(s) | 120, 221, 722, 820, 951, 1181, 1295, 1927, 2104 |
| MboII | GAAGA | 8 cut(s) | 58, 61, 1407, 1541, 1802, 2099, 2104, 2144 |
| MfeI | CAATTG | 1 cut(s) | 846 |
| MflI | RGATCY | 5 cut(s) | 344, 857, 1345, 1727, 1886 |
| MhlI | GDGCHC | 3 cut(s) | 19, 550, 1471 |
| MlsI | TGGCCA | 1 cut(s) | 594 |
| MluNI | TGGCCA | 1 cut(s) | 594 |
| MlyI | GAGTC | 4 cut(s) | 419, 581, 723, 1196 |
| MmeI | TCCRAC | 3 cut(s) | 352, 403, 2095 |
| Mox20I | TGGCCA | 1 cut(s) | 594 |
| MroNI | GCCGGC | 1 cut(s) | 2018 |
| MroXI | GAANNNNTTC | 1 cut(s) | 1046 |
| MscI | TGGCCA | 1 cut(s) | 594 |
| MseI | TTAA | 8 cut(s) | 1076, 1161, 1364, 1611, 1820, 1971, 2223, 2227 |
| MslI | CAYNNNNRTG | 1 cut(s) | 2048 |
| Msp20I | TGGCCA | 1 cut(s) | 594 |
| MspA1I | CMGCKG | 3 cut(s) | 1640, 1709, 1922 |
| MspI | CCGG | 6 cut(s) | 265, 624, 815, 1123, 1763, 2019 |
| MspR9I | CCNGG | 9 cut(s) | 23, 116, 266, 625, 815, 1123, 1473, 1763, 1764 |
| MunI | CAATTG | 1 cut(s) | 846 |
| MvaI | CCWGG | 3 cut(s) | 23, 116, 1473 |
| MvnI | CGCG | 1 cut(s) | 1709 |
| MwoI | GCNNNNNNNGC | 8 cut(s) | 617, 629, 701, 752, 1280, 1487, 1718, 1872 |
| NaeI | GCCGGC | 1 cut(s) | 2020 |
| NciI | CCSGG | 6 cut(s) | 266, 625, 815, 1123, 1763, 1764 |
| NcoI | CCATGG | 1 cut(s) | 595 |
| NdeI | CATATG | 2 cut(s) | 1192, 1606 |
| NgoMIV | GCCGGC | 1 cut(s) | 2018 |
| NheI | GCTAGC | 1 cut(s) | 284 |
| NlaIV | GGNNCC | 2 cut(s) | 1567, 2055 |
| NmeAIII | GCCGAG | 1 cut(s) | 878 |
| NmuCI | GTSAC | 6 cut(s) | 120, 722, 1181, 1295, 1927, 2104 |
| NspI | RCATGY | 2 cut(s) | 1544, 2150 |
| PacI | TTAATTAA | 1 cut(s) | 2227 |
| PaeR7I | CTCGAG | 1 cut(s) | 918 |
| PciI | ACATGT | 1 cut(s) | 2146 |
| PdiI | GCCGGC | 1 cut(s) | 2020 |
| PdmI | GAANNNNTTC | 1 cut(s) | 1046 |
| PfeI | GAWTC | 5 cut(s) | 443, 987, 1259, 2179, 2200 |
| PflMI | CCANNNNNTGG | 2 cut(s) | 489, 871 |
| PleI | GAGTC | 4 cut(s) | 419, 580, 722, 1195 |
| PmaCI | CACGTG | 1 cut(s) | 1421 |
| PmlI | CACGTG | 1 cut(s) | 1421 |
| PpsI | GAGTC | 4 cut(s) | 419, 580, 722, 1195 |
| Ppu21I | YACGTR | 1 cut(s) | 1421 |
| PscI | ACATGT | 1 cut(s) | 2146 |
| PshBI | ATTAAT | 1 cut(s) | 1076 |
| PsiI | TTATAA | 1 cut(s) | 1701 |
| Psp124BI | GAGCTC | 1 cut(s) | 19 |
| Psp6I | CCWGG | 3 cut(s) | 21, 114, 1471 |
| PspCI | CACGTG | 1 cut(s) | 1421 |
| PspEI | GGTNACC | 1 cut(s) | 722 |
| PspGI | CCWGG | 3 cut(s) | 21, 114, 1471 |
| PspN4I | GGNNCC | 2 cut(s) | 1567, 2055 |
| PspPI | GGNCC | 3 cut(s) | 473, 914, 1424 |
| PspXI | VCTCGAGB | 1 cut(s) | 918 |
| PstI | CTGCAG | 1 cut(s) | 837 |
| PstNI | CAGNNNCTG | 2 cut(s) | 1877, 1925 |
| PsuI | RGATCY | 5 cut(s) | 344, 857, 1345, 1727, 1886 |
| PvuII | CAGCTG | 1 cut(s) | 1922 |
| RsaI | GTAC | 6 cut(s) | 113, 828, 928, 973, 1018, 2139 |
| RsaNI | GTAC | 6 cut(s) | 112, 827, 927, 972, 1017, 2138 |
| RseI | CAYNNNNRTG | 1 cut(s) | 2048 |
| SacI | GAGCTC | 1 cut(s) | 19 |
| SacII | CCGCGG | 1 cut(s) | 1710 |
| SaqAI | TTAA | 8 cut(s) | 1076, 1161, 1364, 1611, 1820, 1971, 2223, 2227 |
| Sau96I | GGNCC | 3 cut(s) | 473, 914, 1424 |
| ScaI | AGTACT | 1 cut(s) | 973 |
| SchI | GAGTC | 4 cut(s) | 419, 581, 723, 1196 |
| ScrFI | CCNGG | 9 cut(s) | 23, 116, 266, 625, 815, 1123, 1473, 1763, 1764 |
| SduI | GDGCHC | 3 cut(s) | 19, 550, 1471 |
| SfaNI | GCATC | 6 cut(s) | 722, 757, 1081, 1108, 1375, 2165 |
| SfcI | CTRYAG | 6 cut(s) | 738, 833, 975, 1665, 1755, 1869 |
| Sfr274I | CTCGAG | 1 cut(s) | 918 |
| Sfr303I | CCGCGG | 1 cut(s) | 1710 |
| SgrBI | CCGCGG | 1 cut(s) | 1710 |
| SinI | GGWCC | 3 cut(s) | 473, 914, 1424 |
| SlaI | CTCGAG | 1 cut(s) | 918 |
| SmaI | CCCGGG | 1 cut(s) | 1764 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 2048 |
| SmlI | CTYRAG | 2 cut(s) | 58, 918 |
| SmoI | CTYRAG | 2 cut(s) | 58, 918 |
| SsiI | CCGC | 4 cut(s) | 720, 1640, 1707, 1709 |
| SspI | AATATT | 1 cut(s) | 2013 |
| SspMI | CTAG | 5 cut(s) | 164, 173, 285, 924, 1109 |
| SstI | GAGCTC | 1 cut(s) | 19 |
| StyD4I | CCNGG | 9 cut(s) | 21, 114, 264, 623, 813, 1121, 1471, 1761, 1762 |
| StyI | CCWWGG | 3 cut(s) | 595, 664, 727 |
| TaaI | ACNGT | 8 cut(s) | 392, 826, 948, 961, 1024, 1151, 1553, 2110 |
| TaiI | ACGT | 1 cut(s) | 1423 |
| TaqI | TCGA | 3 cut(s) | 84, 186, 919 |
| TatI | WGTACW | 3 cut(s) | 826, 971, 2137 |
| TauI | GCSGC | 3 cut(s) | 1643, 1709, 1712 |
| TfiI | GAWTC | 5 cut(s) | 443, 987, 1259, 2179, 2200 |
| Tru1I | TTAA | 8 cut(s) | 1076, 1161, 1364, 1611, 1820, 1971, 2223, 2227 |
| Tru9I | TTAA | 8 cut(s) | 1076, 1161, 1364, 1611, 1820, 1971, 2223, 2227 |
| TscAI | CASTG | 9 cut(s) | 265, 397, 613, 1029, 1044, 1230, 1597, 1837, 2166 |
| TseFI | GTSAC | 6 cut(s) | 120, 722, 1181, 1295, 1927, 2104 |
| Tsp45I | GTSAC | 6 cut(s) | 120, 722, 1181, 1295, 1927, 2104 |
| TspDTI | ATGAA | 9 cut(s) | 102, 305, 600, 1346, 1694, 1791, 1938, 2049, 2100 |
| TspMI | CCCGGG | 1 cut(s) | 1762 |
| TspRI | CASTG | 9 cut(s) | 265, 397, 613, 1029, 1044, 1230, 1597, 1837, 2166 |
| Van91I | CCANNNNNTGG | 2 cut(s) | 489, 871 |
| VpaK11BI | GGWCC | 3 cut(s) | 473, 914, 1424 |
| VspI | ATTAAT | 1 cut(s) | 1076 |
| XapI | RAATTY | 7 cut(s) | 432, 517, 1434, 1681, 1715, 1955, 1990 |
| XceI | RCATGY | 2 cut(s) | 1544, 2150 |
| XhoI | CTCGAG | 1 cut(s) | 918 |
| XmaI | CCCGGG | 1 cut(s) | 1762 |
| XmiI | GTMKAC | 3 cut(s) | 169, 1132, 1555 |
| XmnI | GAANNNNTTC | 1 cut(s) | 1046 |
| XspI | CTAG | 5 cut(s) | 164, 173, 285, 924, 1109 |
| ZrmI | AGTACT | 1 cut(s) | 973 |