response regulator
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB1I | GGYRCC | 1 cut(s) | 1480 |
| AccB7I | CCANNNNNTGG | 2 cut(s) | 977, 1163 |
| AccI | GTMKAC | 1 cut(s) | 1314 |
| AciI | CCGC | 6 cut(s) | 8, 312, 806, 1204, 1207, 1477 |
| AclWI | GGATC | 2 cut(s) | 1074, 1188 |
| AcoI | YGGCCR | 3 cut(s) | 675, 868, 1105 |
| AcsI | RAATTY | 2 cut(s) | 284, 649 |
| AdeI | CACNNNGTG | 1 cut(s) | 488 |
| AfaI | GTAC | 2 cut(s) | 365, 1294 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 977, 1163, 1210 |
| AgsI | TTSAA | 7 cut(s) | 260, 796, 889, 968, 1062, 1413, 1434 |
| AhlI | ACTAGT | 1 cut(s) | 880 |
| AjiI | CACGTC | 1 cut(s) | 1115 |
| AjnI | CCWGG | 4 cut(s) | 472, 484, 739, 815 |
| AjuI | GAANNNNNNNTTGG | 4 cut(s) | 44, 76, 1355, 1387 |
| Alw21I | GWGCWC | 1 cut(s) | 472 |
| Alw26I | GTCTC | 3 cut(s) | 160, 506, 897 |
| AlwI | GGATC | 2 cut(s) | 1074, 1188 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 670 |
| Ama87I | CYCGRG | 1 cut(s) | 722 |
| AoxI | GGCC | 6 cut(s) | 552, 558, 675, 868, 1105, 1270 |
| ApeKI | GCWGC | 7 cut(s) | 425, 1007, 1010, 1065, 1074, 1214, 1536 |
| ApoI | RAATTY | 2 cut(s) | 284, 649 |
| AseI | ATTAAT | 1 cut(s) | 1562 |
| AsuHPI | GGTGA | 2 cut(s) | 500, 1351 |
| AvaI | CYCGRG | 1 cut(s) | 722 |
| BaeGI | GKGCMC | 1 cut(s) | 577 |
| BalI | TGGCCA | 2 cut(s) | 677, 870 |
| BanI | GGYRCC | 1 cut(s) | 1480 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 773, 805 |
| BbsI | GAAGAC | 2 cut(s) | 877, 1422 |
| Bbv12I | GWGCWC | 1 cut(s) | 472 |
| BbvI | GCAGC | 7 cut(s) | 412, 994, 997, 1077, 1086, 1226, 1548 |
| BccI | CCATC | 6 cut(s) | 494, 686, 879, 979, 1040, 1059 |
| BceAI | ACGGC | 2 cut(s) | 1227, 1502 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 764, 798 |
| BciT130I | CCWGG | 4 cut(s) | 474, 486, 741, 817 |
| BciVI | GTATCC | 1 cut(s) | 1531 |
| BclI | TGATCA | 1 cut(s) | 72 |
| BcoDI | GTCTC | 3 cut(s) | 160, 506, 897 |
| BcuI | ACTAGT | 1 cut(s) | 880 |
| BfaI | CTAG | 7 cut(s) | 110, 218, 750, 765, 881, 995, 1553 |
| BfmI | CTRYAG | 2 cut(s) | 12, 114 |
| BfuI | GTATCC | 1 cut(s) | 1531 |
| BglII | AGATCT | 1 cut(s) | 229 |
| BisI | GCNGC | 9 cut(s) | 9, 426, 1008, 1011, 1066, 1075, 1207, 1215, 1537 |
| BlsI | GCNGC | 9 cut(s) | 10, 427, 1009, 1012, 1067, 1076, 1208, 1216, 1538 |
| Bme1390I | CCNGG | 4 cut(s) | 474, 486, 741, 817 |
| BmeT110I | CYCGRG | 1 cut(s) | 722 |
| BmgBI | CACGTC | 1 cut(s) | 1115 |
| BmiI | GGNNCC | 3 cut(s) | 1030, 1102, 1482 |
| BmrFI | CCNGG | 4 cut(s) | 474, 486, 741, 817 |
| BmsI | GCATC | 3 cut(s) | 88, 166, 1296 |
| BpiI | GAAGAC | 2 cut(s) | 877, 1422 |
| BpmI | CTGGAG | 2 cut(s) | 456, 1474 |
| Bsa29I | ATCGAT | 1 cut(s) | 174 |
| BsaAI | YACGTR | 1 cut(s) | 578 |
| BsaBI | GATNNNNATC | 1 cut(s) | 77 |
| BsaI | GGTCTC | 1 cut(s) | 897 |
| BsaJI | CCNNGG | 4 cut(s) | 555, 561, 1024, 1334 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 1013, 1043 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 977, 1163, 1210 |
| Bse1I | ACTGG | 2 cut(s) | 1108, 1491 |
| Bse3DI | GCAATG | 2 cut(s) | 132, 1258 |
| Bse8I | GATNNNNATC | 1 cut(s) | 77 |
| BseBI | CCWGG | 4 cut(s) | 474, 486, 741, 817 |
| BseCI | ATCGAT | 1 cut(s) | 174 |
| BseDI | CCNNGG | 4 cut(s) | 555, 561, 1024, 1334 |
| BseGI | GGATG | 4 cut(s) | 10, 505, 871, 1032 |
| BseJI | GATNNNNATC | 1 cut(s) | 77 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 977, 1163, 1210 |
| BseMI | GCAATG | 2 cut(s) | 132, 1258 |
| BseMII | CTCAG | 3 cut(s) | 15, 257, 501 |
| BseNI | ACTGG | 2 cut(s) | 1108, 1491 |
| BseRI | GAGGAG | 1 cut(s) | 914 |
| BseSI | GKGCMC | 1 cut(s) | 577 |
| BseXI | GCAGC | 7 cut(s) | 412, 994, 997, 1077, 1086, 1226, 1548 |
| BshFI | GGCC | 6 cut(s) | 554, 560, 677, 870, 1107, 1272 |
| BshNI | GGYRCC | 1 cut(s) | 1480 |
| BshVI | ATCGAT | 1 cut(s) | 174 |
| BsiHKAI | GWGCWC | 1 cut(s) | 472 |
| BsiHKCI | CYCGRG | 1 cut(s) | 722 |
| BsiSI | CCGG | 1 cut(s) | 1104 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 977, 1163, 1210 |
| BsmAI | GTCTC | 3 cut(s) | 160, 506, 897 |
| BsnI | GGCC | 6 cut(s) | 554, 560, 677, 870, 1107, 1272 |
| Bso31I | GGTCTC | 1 cut(s) | 897 |
| BsoBI | CYCGRG | 1 cut(s) | 722 |
| Bsp1286I | GDGCHC | 2 cut(s) | 472, 577 |
| Bsp143I | GATC | 5 cut(s) | 72, 214, 229, 1079, 1180 |
| BspACI | CCGC | 6 cut(s) | 8, 312, 806, 1204, 1207, 1477 |
| BspANI | GGCC | 6 cut(s) | 554, 560, 677, 870, 1107, 1272 |
| BspCNI | CTCAG | 3 cut(s) | 16, 256, 502 |
| BspDI | ATCGAT | 1 cut(s) | 174 |
| BspHI | TCATGA | 1 cut(s) | 729 |
| BspLI | GGNNCC | 3 cut(s) | 1030, 1102, 1482 |
| BspPI | GGATC | 2 cut(s) | 1074, 1188 |
| BspQI | GCTCTTC | 1 cut(s) | 600 |
| BspT107I | GGYRCC | 1 cut(s) | 1480 |
| BspTNI | GGTCTC | 1 cut(s) | 897 |
| BsrDI | GCAATG | 2 cut(s) | 132, 1258 |
| BsrI | ACTGG | 2 cut(s) | 1108, 1491 |
| BssECI | CCNNGG | 4 cut(s) | 555, 561, 1024, 1334 |
| BssMI | GATC | 5 cut(s) | 72, 214, 229, 1079, 1180 |
| BssNAI | GTATAC | 1 cut(s) | 1315 |
| BssT1I | CCWWGG | 3 cut(s) | 561, 1024, 1334 |
| Bst1107I | GTATAC | 1 cut(s) | 1315 |
| Bst2UI | CCWGG | 4 cut(s) | 474, 486, 741, 817 |
| Bst4CI | ACNGT | 2 cut(s) | 1301, 1409 |
| Bst6I | CTCTTC | 1 cut(s) | 600 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 1159 |
| BstBAI | YACGTR | 1 cut(s) | 578 |
| BstC8I | GCNNGC | 2 cut(s) | 675, 1151 |
| BstDEI | CTNAG | 3 cut(s) | 24, 243, 510 |
| BstEII | GGTNACC | 1 cut(s) | 445 |
| BstF5I | GGATG | 4 cut(s) | 10, 505, 871, 1032 |
| BstKTI | GATC | 5 cut(s) | 75, 217, 232, 1082, 1183 |
| BstMAI | GTCTC | 3 cut(s) | 160, 506, 897 |
| BstMBI | GATC | 5 cut(s) | 72, 214, 229, 1079, 1180 |
| BstMWI | GCNNNNNNNGC | 7 cut(s) | 425, 812, 1004, 1071, 1074, 1159, 1542 |
| BstNI | CCWGG | 4 cut(s) | 474, 486, 741, 817 |
| BstNSI | RCATGY | 1 cut(s) | 275 |
| BstPI | GGTNACC | 1 cut(s) | 445 |
| BstSCI | CCNGG | 4 cut(s) | 472, 484, 739, 815 |
| BstSFI | CTRYAG | 2 cut(s) | 12, 114 |
| BstSLI | GKGCMC | 1 cut(s) | 577 |
| BstV1I | GCAGC | 7 cut(s) | 412, 994, 997, 1077, 1086, 1226, 1548 |
| BstV2I | GAAGAC | 2 cut(s) | 877, 1422 |
| BstX2I | RGATCY | 2 cut(s) | 229, 1079 |
| BstYI | RGATCY | 2 cut(s) | 229, 1079 |
| BstZ17I | GTATAC | 1 cut(s) | 1315 |
| Bsu15I | ATCGAT | 1 cut(s) | 174 |
| BsuI | GTATCC | 1 cut(s) | 1531 |
| BsuRI | GGCC | 6 cut(s) | 554, 560, 677, 870, 1107, 1272 |
| BsuTUI | ATCGAT | 1 cut(s) | 174 |
| BtrI | CACGTC | 1 cut(s) | 1115 |
| BtsCI | GGATG | 4 cut(s) | 10, 505, 871, 1032 |
| BtsI | GCAGTG | 2 cut(s) | 1002, 1546 |
| BtsIMutI | CAGTG | 2 cut(s) | 1002, 1546 |
| Cac8I | GCNNGC | 2 cut(s) | 675, 1151 |
| CaiI | CAGNNNCTG | 1 cut(s) | 670 |
| CciI | TCATGA | 1 cut(s) | 729 |
| ClaI | ATCGAT | 1 cut(s) | 174 |
| CsiI | ACCWGGT | 1 cut(s) | 484 |
| Csp6I | GTAC | 2 cut(s) | 364, 1293 |
| CviAII | CATG | 5 cut(s) | 138, 272, 278, 730, 1447 |
| CviQI | GTAC | 2 cut(s) | 364, 1293 |
| DdeI | CTNAG | 3 cut(s) | 24, 243, 510 |
| DpnI | GATC | 5 cut(s) | 74, 216, 231, 1081, 1182 |
| DpnII | GATC | 5 cut(s) | 72, 214, 229, 1079, 1180 |
| DraIII | CACNNNGTG | 1 cut(s) | 488 |
| EaeI | YGGCCR | 3 cut(s) | 675, 868, 1105 |
| Eam1104I | CTCTTC | 1 cut(s) | 600 |
| EarI | CTCTTC | 1 cut(s) | 600 |
| Eco130I | CCWWGG | 3 cut(s) | 561, 1024, 1334 |
| Eco31I | GGTCTC | 1 cut(s) | 897 |
| Eco88I | CYCGRG | 1 cut(s) | 722 |
| Eco91I | GGTNACC | 1 cut(s) | 445 |
| EcoO65I | GGTNACC | 1 cut(s) | 445 |
| EcoRII | CCWGG | 4 cut(s) | 472, 484, 739, 815 |
| EcoT14I | CCWWGG | 3 cut(s) | 561, 1024, 1334 |
| ErhI | CCWWGG | 3 cut(s) | 561, 1024, 1334 |
| FaeI | CATG | 5 cut(s) | 141, 275, 281, 733, 1450 |
| FatI | CATG | 5 cut(s) | 137, 271, 277, 729, 1446 |
| FauI | CCCGC | 1 cut(s) | 1470 |
| FauNDI | CATATG | 1 cut(s) | 237 |
| FbaI | TGATCA | 1 cut(s) | 72 |
| FblI | GTMKAC | 1 cut(s) | 1314 |
| Fnu4HI | GCNGC | 9 cut(s) | 9, 426, 1008, 1011, 1066, 1075, 1207, 1215, 1537 |
| FokI | GGATG | 4 cut(s) | 17, 512, 858, 1019 |
| Fsp4HI | GCNGC | 9 cut(s) | 9, 426, 1008, 1011, 1066, 1075, 1207, 1215, 1537 |
| FspBI | CTAG | 7 cut(s) | 110, 218, 750, 765, 881, 995, 1553 |
| GluI | GCNGC | 9 cut(s) | 9, 426, 1008, 1011, 1066, 1075, 1207, 1215, 1537 |
| GsuI | CTGGAG | 2 cut(s) | 456, 1474 |
| HaeIII | GGCC | 6 cut(s) | 554, 560, 677, 870, 1107, 1272 |
| HapII | CCGG | 1 cut(s) | 1104 |
| Hin1II | CATG | 5 cut(s) | 141, 275, 281, 733, 1450 |
| HincII | GTYRAC | 2 cut(s) | 1462, 1574 |
| HindII | GTYRAC | 2 cut(s) | 1462, 1574 |
| HindIII | AAGCTT | 2 cut(s) | 856, 1435 |
| HinfI | GANTC | 1 cut(s) | 718 |
| HpaI | GTTAAC | 1 cut(s) | 1462 |
| HpaII | CCGG | 1 cut(s) | 1104 |
| HphI | GGTGA | 2 cut(s) | 500, 1351 |
| Hpy166II | GTNNAC | 7 cut(s) | 91, 364, 645, 1315, 1462, 1471, 1574 |
| Hpy188I | TCNGA | 6 cut(s) | 25, 246, 511, 523, 683, 838 |
| Hpy188III | TCNNGA | 5 cut(s) | 722, 730, 793, 1395, 1441 |
| Hpy8I | GTNNAC | 7 cut(s) | 91, 364, 645, 1315, 1462, 1471, 1574 |
| Hpy99I | CGWCG | 1 cut(s) | 98 |
| HpyAV | CCTTC | 2 cut(s) | 200, 1093 |
| HpyCH4III | ACNGT | 2 cut(s) | 1301, 1409 |
| HpyCH4IV | ACGT | 2 cut(s) | 577, 1114 |
| HpyCH4V | TGCA | 7 cut(s) | 44, 101, 265, 775, 863, 1228, 1309 |
| HpyF10VI | GCNNNNNNNGC | 7 cut(s) | 425, 812, 1004, 1071, 1074, 1159, 1542 |
| HpyF3I | CTNAG | 3 cut(s) | 24, 243, 510 |
| HpySE526I | ACGT | 2 cut(s) | 577, 1114 |
| Hsp92II | CATG | 5 cut(s) | 141, 275, 281, 733, 1450 |
| Ksp22I | TGATCA | 1 cut(s) | 72 |
| KspAI | GTTAAC | 1 cut(s) | 1462 |
| Kzo9I | GATC | 5 cut(s) | 72, 214, 229, 1079, 1180 |
| LguI | GCTCTTC | 1 cut(s) | 600 |
| LmnI | GCTCC | 2 cut(s) | 475, 1034 |
| Lsp1109I | GCAGC | 7 cut(s) | 412, 994, 997, 1077, 1086, 1226, 1548 |
| LweI | GCATC | 3 cut(s) | 88, 166, 1296 |
| MabI | ACCWGGT | 1 cut(s) | 484 |
| MaeI | CTAG | 7 cut(s) | 110, 218, 750, 765, 881, 995, 1553 |
| MaeII | ACGT | 2 cut(s) | 577, 1114 |
| MaeIII | GTNAC | 5 cut(s) | 143, 223, 445, 1110, 1508 |
| MalI | GATC | 5 cut(s) | 74, 216, 231, 1081, 1182 |
| MboI | GATC | 5 cut(s) | 72, 214, 229, 1079, 1180 |
| MfeI | CAATTG | 2 cut(s) | 951, 1232 |
| MflI | RGATCY | 2 cut(s) | 229, 1079 |
| MhlI | GDGCHC | 2 cut(s) | 472, 577 |
| MlsI | TGGCCA | 2 cut(s) | 677, 870 |
| MluCI | AATT | 7 cut(s) | 260, 284, 649, 951, 1037, 1045, 1232 |
| MluNI | TGGCCA | 2 cut(s) | 677, 870 |
| MmeI | TCCRAC | 1 cut(s) | 922 |
| Mox20I | TGGCCA | 2 cut(s) | 677, 870 |
| MscI | TGGCCA | 2 cut(s) | 677, 870 |
| MseI | TTAA | 5 cut(s) | 132, 288, 746, 1461, 1562 |
| MslI | CAYNNNNRTG | 2 cut(s) | 276, 734 |
| Msp20I | TGGCCA | 2 cut(s) | 677, 870 |
| MspA1I | CMGCKG | 3 cut(s) | 977, 1477, 1501 |
| MspI | CCGG | 1 cut(s) | 1104 |
| MspR9I | CCNGG | 4 cut(s) | 474, 486, 741, 817 |
| MunI | CAATTG | 2 cut(s) | 951, 1232 |
| MvaI | CCWGG | 4 cut(s) | 474, 486, 741, 817 |
| MwoI | GCNNNNNNNGC | 7 cut(s) | 425, 812, 1004, 1071, 1074, 1159, 1542 |
| NdeI | CATATG | 1 cut(s) | 237 |
| NdeII | GATC | 5 cut(s) | 72, 214, 229, 1079, 1180 |
| NlaIII | CATG | 5 cut(s) | 141, 275, 281, 733, 1450 |
| NlaIV | GGNNCC | 3 cut(s) | 1030, 1102, 1482 |
| NmeAIII | GCCGAG | 1 cut(s) | 580 |
| NmuCI | GTSAC | 1 cut(s) | 1110 |
| NspI | RCATGY | 1 cut(s) | 275 |
| PaeR7I | CTCGAG | 1 cut(s) | 722 |
| PagI | TCATGA | 1 cut(s) | 729 |
| PciSI | GCTCTTC | 1 cut(s) | 600 |
| PfeI | GAWTC | 1 cut(s) | 718 |
| PflMI | CCANNNNNTGG | 2 cut(s) | 977, 1163 |
| PfoI | TCCNGGA | 1 cut(s) | 472 |
| PkrI | GCNGC | 9 cut(s) | 10, 427, 1009, 1012, 1067, 1076, 1208, 1216, 1538 |
| Ppu21I | YACGTR | 1 cut(s) | 578 |
| PshBI | ATTAAT | 1 cut(s) | 1562 |
| Psp6I | CCWGG | 4 cut(s) | 472, 484, 739, 815 |
| PspEI | GGTNACC | 1 cut(s) | 445 |
| PspGI | CCWGG | 4 cut(s) | 472, 484, 739, 815 |
| PspN4I | GGNNCC | 3 cut(s) | 1030, 1102, 1482 |
| PstNI | CAGNNNCTG | 1 cut(s) | 670 |
| PsuI | RGATCY | 2 cut(s) | 229, 1079 |
| PvuII | CAGCTG | 2 cut(s) | 977, 1501 |
| RsaI | GTAC | 2 cut(s) | 365, 1294 |
| RsaNI | GTAC | 2 cut(s) | 364, 1293 |
| RseI | CAYNNNNRTG | 2 cut(s) | 276, 734 |
| SapI | GCTCTTC | 1 cut(s) | 600 |
| SaqAI | TTAA | 5 cut(s) | 132, 288, 746, 1461, 1562 |
| SatI | GCNGC | 9 cut(s) | 9, 426, 1008, 1011, 1066, 1075, 1207, 1215, 1537 |
| Sau3AI | GATC | 5 cut(s) | 72, 214, 229, 1079, 1180 |
| ScrFI | CCNGG | 4 cut(s) | 474, 486, 741, 817 |
| SduI | GDGCHC | 2 cut(s) | 472, 577 |
| SexAI | ACCWGGT | 1 cut(s) | 484 |
| SfaNI | GCATC | 3 cut(s) | 88, 166, 1296 |
| SfcI | CTRYAG | 2 cut(s) | 12, 114 |
| Sfr274I | CTCGAG | 1 cut(s) | 722 |
| SlaI | CTCGAG | 1 cut(s) | 722 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 276, 734 |
| SmlI | CTYRAG | 1 cut(s) | 722 |
| SmoI | CTYRAG | 1 cut(s) | 722 |
| SpeI | ACTAGT | 1 cut(s) | 880 |
| Sse9I | AATT | 7 cut(s) | 260, 284, 649, 951, 1037, 1045, 1232 |
| SsiI | CCGC | 6 cut(s) | 8, 312, 806, 1204, 1207, 1477 |
| SspI | AATATT | 2 cut(s) | 911, 1288 |
| SspMI | CTAG | 7 cut(s) | 110, 218, 750, 765, 881, 995, 1553 |
| StyD4I | CCNGG | 4 cut(s) | 472, 484, 739, 815 |
| StyI | CCWWGG | 3 cut(s) | 561, 1024, 1334 |
| TaaI | ACNGT | 2 cut(s) | 1301, 1409 |
| TaiI | ACGT | 2 cut(s) | 580, 1117 |
| TaqI | TCGA | 5 cut(s) | 174, 193, 495, 723, 1440 |
| TasI | AATT | 7 cut(s) | 260, 284, 649, 951, 1037, 1045, 1232 |
| TatI | WGTACW | 1 cut(s) | 363 |
| TauI | GCSGC | 2 cut(s) | 11, 1209 |
| TfiI | GAWTC | 1 cut(s) | 718 |
| Tru1I | TTAA | 5 cut(s) | 132, 288, 746, 1461, 1562 |
| Tru9I | TTAA | 5 cut(s) | 132, 288, 746, 1461, 1562 |
| TscAI | CASTG | 2 cut(s) | 1009, 1546 |
| TseFI | GTSAC | 1 cut(s) | 1110 |
| TseI | GCWGC | 7 cut(s) | 425, 1007, 1010, 1065, 1074, 1214, 1536 |
| Tsp45I | GTSAC | 1 cut(s) | 1110 |
| TspDTI | ATGAA | 8 cut(s) | 224, 263, 294, 618, 718, 746, 1253, 1292 |
| TspRI | CASTG | 2 cut(s) | 1009, 1546 |
| Van91I | CCANNNNNTGG | 2 cut(s) | 977, 1163 |
| VspI | ATTAAT | 1 cut(s) | 1562 |
| XapI | RAATTY | 2 cut(s) | 284, 649 |
| XceI | RCATGY | 1 cut(s) | 275 |
| XcmI | CCANNNNNNNNNTGG | 2 cut(s) | 639, 1498 |
| XhoI | CTCGAG | 1 cut(s) | 722 |
| XmiI | GTMKAC | 1 cut(s) | 1314 |
| XspI | CTAG | 7 cut(s) | 110, 218, 750, 765, 881, 995, 1553 |