Prupe.2G289800_v2.0.a1
MYB Family

response regulator

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp02
Physical Location & Seq
Forward (+)
28411867 .. 28415244
3378 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.2G289800.1

Sequence Viewer

Length: 1581 bp
ATGGATGCGGCTACAGAGAGGTCTGAGTTTAGGCAATCTTCTGCAAATACCAAACCCTCTTTCGTAGATATGATCAATATCTTGGTTGTGGACGACGATGCAACCACTCTAGCTATAGTTTCAGCAATGCTTAAAACATGGAGTTACCAAGTTGTCTCGGTTAGAAACCCTATCGATGCTTTGGCTACCCTTCGAGCGAGGAAAGGCATATTTGATCTAGTTGTTACAGATCTTCATATGCCTCAGATGAATGGGTTTGAATTGCAAAAGCATGTCCATGAAGAATTTAAGCTACCTGTTATTATGATGTCCGCAGATGACAAAGAGAGTGTGATACTAAAGAGTTTAGAGGGTGGAGTTGTGTACTATATAGTAAAGCCTGTGAGCAAAGATGACATAAAGAATGTGTGGCAGTATGCTGTTGCTGCTAAAAAGGGTAAATCGGTTACCATAGAGGAAATAGAAAGTGCTCCAGGAGAAGCACCTGGTGAGGTCGAGGATGGAAGTTCTGAGACATCTTCCGATACTGACGAAGAAAAACAGGATAAAAAGGCCGAGGCCAAGGTCAAAAGGGCACGTAAGAGGCACAGGGAAGATGATAATGAAGAGCGTATGGTTGCCCCAAAGAAGCCAAAAGTGGTGTGGACAAATTCACTTCACAATCAGTTTCTGCTGGCCATCAGACACATTGGCTTGGACAAGGCTGTGCCAAAGAGGATTCTCGAGTTCATGAATGTGCCAGGCTTAACTAGAGAAAATGTAGCTAGTCATTTGCAGAAGTATCGTATCTTCTTGAAACGAGTTGCGGAGAAAGCCAGGCTATCCAAGTGCTTGTCCGAGAGGGTGTTCAGGTCAAGCTTTGCATTTGGCCATCCAGCACTAGTCTTCAACAATGTCCAACGAGACCAATATTATTCACAACTCCTCAACCCACAGCAAATGGGAACATCAATTGCCTCTACATTTCAACCATCAGCTGGAAATGGAAGCACCCTAGCTCTCACTGCTGCTGCTTCCAATAACCTTGGCTCCATCCAATTCCCCAATTACCATCAATCTTCAAGCAGCAACAGCAGCAGATCCTTCCCTCAACTTATCGGTTCCGGCCAGTCACGTCTATTGAGCAATAATCAAGCTAACATTCTGTGCCAGCAACCAATGCTTGGTAATGGTAATGGGGATCAGCTACTTTGCCAAGCAAACCGCCGCACGGCAGCTTTTGGGGTGCAACAATTGATGAACACTTTTGGCAATGGAGGTATGTCCTTTGGCCTAATGAACAATAATATTGGTACAAACAGTTTGATGCAAGTATACCCACAACAAAGTCAGCCAAGGCAGAATGGAGTTTTCACTTTCACCAATAACCCATTCAGCTACAACTTTGCTACATCAGGAAACCAGAACAGTTCAAGTTATACTCCATTGTCTTCAAGCTTCGAGAACATGGGGTCTAATGTTAACAATGTGAACCAGCGGGTGCCAAACTCCAGTCATCAGCTGGTTAGTAACTTTGCCGTATCCCAGATTATGAGCAGCAGTGGCAGAGAGCTAGTGGGATTAATGGGTAGTCAACCAGCT
Functional Annotation
KEGG Pathways
Metabolic & Signaling
Pfam Domains
Protein Families

Protein Analysis

527

Amino Acids

58.12

Weight (kDa)

9.1

Isoelectric Point (pI)

47.04

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 1480
AccB7I CCANNNNNTGG 2 cut(s) 977, 1163
AccI GTMKAC 1 cut(s) 1314
AciI CCGC 6 cut(s) 8, 312, 806, 1204, 1207, 1477
AclWI GGATC 2 cut(s) 1074, 1188
AcoI YGGCCR 3 cut(s) 675, 868, 1105
AcsI RAATTY 2 cut(s) 284, 649
AdeI CACNNNGTG 1 cut(s) 488
AfaI GTAC 2 cut(s) 365, 1294
AfiI CCNNNNNNNGG 3 cut(s) 977, 1163, 1210
AgsI TTSAA 7 cut(s) 260, 796, 889, 968, 1062, 1413, 1434
AhlI ACTAGT 1 cut(s) 880
AjiI CACGTC 1 cut(s) 1115
AjnI CCWGG 4 cut(s) 472, 484, 739, 815
AjuI GAANNNNNNNTTGG 4 cut(s) 44, 76, 1355, 1387
Alw21I GWGCWC 1 cut(s) 472
Alw26I GTCTC 3 cut(s) 160, 506, 897
AlwI GGATC 2 cut(s) 1074, 1188
AlwNI CAGNNNCTG 1 cut(s) 670
Ama87I CYCGRG 1 cut(s) 722
AoxI GGCC 6 cut(s) 552, 558, 675, 868, 1105, 1270
ApeKI GCWGC 7 cut(s) 425, 1007, 1010, 1065, 1074, 1214, 1536
ApoI RAATTY 2 cut(s) 284, 649
AseI ATTAAT 1 cut(s) 1562
AsuHPI GGTGA 2 cut(s) 500, 1351
AvaI CYCGRG 1 cut(s) 722
BaeGI GKGCMC 1 cut(s) 577
BalI TGGCCA 2 cut(s) 677, 870
BanI GGYRCC 1 cut(s) 1480
BarI GAAGNNNNNNTAC 2 cut(s) 773, 805
BbsI GAAGAC 2 cut(s) 877, 1422
Bbv12I GWGCWC 1 cut(s) 472
BbvI GCAGC 7 cut(s) 412, 994, 997, 1077, 1086, 1226, 1548
BccI CCATC 6 cut(s) 494, 686, 879, 979, 1040, 1059
BceAI ACGGC 2 cut(s) 1227, 1502
BcgI CGANNNNNNTGC 2 cut(s) 764, 798
BciT130I CCWGG 4 cut(s) 474, 486, 741, 817
BciVI GTATCC 1 cut(s) 1531
BclI TGATCA 1 cut(s) 72
BcoDI GTCTC 3 cut(s) 160, 506, 897
BcuI ACTAGT 1 cut(s) 880
BfaI CTAG 7 cut(s) 110, 218, 750, 765, 881, 995, 1553
BfmI CTRYAG 2 cut(s) 12, 114
BfuI GTATCC 1 cut(s) 1531
BglII AGATCT 1 cut(s) 229
BisI GCNGC 9 cut(s) 9, 426, 1008, 1011, 1066, 1075, 1207, 1215, 1537
BlsI GCNGC 9 cut(s) 10, 427, 1009, 1012, 1067, 1076, 1208, 1216, 1538
Bme1390I CCNGG 4 cut(s) 474, 486, 741, 817
BmeT110I CYCGRG 1 cut(s) 722
BmgBI CACGTC 1 cut(s) 1115
BmiI GGNNCC 3 cut(s) 1030, 1102, 1482
BmrFI CCNGG 4 cut(s) 474, 486, 741, 817
BmsI GCATC 3 cut(s) 88, 166, 1296
BpiI GAAGAC 2 cut(s) 877, 1422
BpmI CTGGAG 2 cut(s) 456, 1474
Bsa29I ATCGAT 1 cut(s) 174
BsaAI YACGTR 1 cut(s) 578
BsaBI GATNNNNATC 1 cut(s) 77
BsaI GGTCTC 1 cut(s) 897
BsaJI CCNNGG 4 cut(s) 555, 561, 1024, 1334
BsaXI ACNNNNNCTCC 2 cut(s) 1013, 1043
Bsc4I CCNNNNNNNGG 3 cut(s) 977, 1163, 1210
Bse1I ACTGG 2 cut(s) 1108, 1491
Bse3DI GCAATG 2 cut(s) 132, 1258
Bse8I GATNNNNATC 1 cut(s) 77
BseBI CCWGG 4 cut(s) 474, 486, 741, 817
BseCI ATCGAT 1 cut(s) 174
BseDI CCNNGG 4 cut(s) 555, 561, 1024, 1334
BseGI GGATG 4 cut(s) 10, 505, 871, 1032
BseJI GATNNNNATC 1 cut(s) 77
BseLI CCNNNNNNNGG 3 cut(s) 977, 1163, 1210
BseMI GCAATG 2 cut(s) 132, 1258
BseMII CTCAG 3 cut(s) 15, 257, 501
BseNI ACTGG 2 cut(s) 1108, 1491
BseRI GAGGAG 1 cut(s) 914
BseSI GKGCMC 1 cut(s) 577
BseXI GCAGC 7 cut(s) 412, 994, 997, 1077, 1086, 1226, 1548
BshFI GGCC 6 cut(s) 554, 560, 677, 870, 1107, 1272
BshNI GGYRCC 1 cut(s) 1480
BshVI ATCGAT 1 cut(s) 174
BsiHKAI GWGCWC 1 cut(s) 472
BsiHKCI CYCGRG 1 cut(s) 722
BsiSI CCGG 1 cut(s) 1104
BslI CCNNNNNNNGG 3 cut(s) 977, 1163, 1210
BsmAI GTCTC 3 cut(s) 160, 506, 897
BsnI GGCC 6 cut(s) 554, 560, 677, 870, 1107, 1272
Bso31I GGTCTC 1 cut(s) 897
BsoBI CYCGRG 1 cut(s) 722
Bsp1286I GDGCHC 2 cut(s) 472, 577
Bsp143I GATC 5 cut(s) 72, 214, 229, 1079, 1180
BspACI CCGC 6 cut(s) 8, 312, 806, 1204, 1207, 1477
BspANI GGCC 6 cut(s) 554, 560, 677, 870, 1107, 1272
BspCNI CTCAG 3 cut(s) 16, 256, 502
BspDI ATCGAT 1 cut(s) 174
BspHI TCATGA 1 cut(s) 729
BspLI GGNNCC 3 cut(s) 1030, 1102, 1482
BspPI GGATC 2 cut(s) 1074, 1188
BspQI GCTCTTC 1 cut(s) 600
BspT107I GGYRCC 1 cut(s) 1480
BspTNI GGTCTC 1 cut(s) 897
BsrDI GCAATG 2 cut(s) 132, 1258
BsrI ACTGG 2 cut(s) 1108, 1491
BssECI CCNNGG 4 cut(s) 555, 561, 1024, 1334
BssMI GATC 5 cut(s) 72, 214, 229, 1079, 1180
BssNAI GTATAC 1 cut(s) 1315
BssT1I CCWWGG 3 cut(s) 561, 1024, 1334
Bst1107I GTATAC 1 cut(s) 1315
Bst2UI CCWGG 4 cut(s) 474, 486, 741, 817
Bst4CI ACNGT 2 cut(s) 1301, 1409
Bst6I CTCTTC 1 cut(s) 600
BstAPI GCANNNNNTGC 1 cut(s) 1159
BstBAI YACGTR 1 cut(s) 578
BstC8I GCNNGC 2 cut(s) 675, 1151
BstDEI CTNAG 3 cut(s) 24, 243, 510
BstEII GGTNACC 1 cut(s) 445
BstF5I GGATG 4 cut(s) 10, 505, 871, 1032
BstKTI GATC 5 cut(s) 75, 217, 232, 1082, 1183
BstMAI GTCTC 3 cut(s) 160, 506, 897
BstMBI GATC 5 cut(s) 72, 214, 229, 1079, 1180
BstMWI GCNNNNNNNGC 7 cut(s) 425, 812, 1004, 1071, 1074, 1159, 1542
BstNI CCWGG 4 cut(s) 474, 486, 741, 817
BstNSI RCATGY 1 cut(s) 275
BstPI GGTNACC 1 cut(s) 445
BstSCI CCNGG 4 cut(s) 472, 484, 739, 815
BstSFI CTRYAG 2 cut(s) 12, 114
BstSLI GKGCMC 1 cut(s) 577
BstV1I GCAGC 7 cut(s) 412, 994, 997, 1077, 1086, 1226, 1548
BstV2I GAAGAC 2 cut(s) 877, 1422
BstX2I RGATCY 2 cut(s) 229, 1079
BstYI RGATCY 2 cut(s) 229, 1079
BstZ17I GTATAC 1 cut(s) 1315
Bsu15I ATCGAT 1 cut(s) 174
BsuI GTATCC 1 cut(s) 1531
BsuRI GGCC 6 cut(s) 554, 560, 677, 870, 1107, 1272
BsuTUI ATCGAT 1 cut(s) 174
BtrI CACGTC 1 cut(s) 1115
BtsCI GGATG 4 cut(s) 10, 505, 871, 1032
BtsI GCAGTG 2 cut(s) 1002, 1546
BtsIMutI CAGTG 2 cut(s) 1002, 1546
Cac8I GCNNGC 2 cut(s) 675, 1151
CaiI CAGNNNCTG 1 cut(s) 670
CciI TCATGA 1 cut(s) 729
ClaI ATCGAT 1 cut(s) 174
CsiI ACCWGGT 1 cut(s) 484
Csp6I GTAC 2 cut(s) 364, 1293
CviAII CATG 5 cut(s) 138, 272, 278, 730, 1447
CviQI GTAC 2 cut(s) 364, 1293
DdeI CTNAG 3 cut(s) 24, 243, 510
DpnI GATC 5 cut(s) 74, 216, 231, 1081, 1182
DpnII GATC 5 cut(s) 72, 214, 229, 1079, 1180
DraIII CACNNNGTG 1 cut(s) 488
EaeI YGGCCR 3 cut(s) 675, 868, 1105
Eam1104I CTCTTC 1 cut(s) 600
EarI CTCTTC 1 cut(s) 600
Eco130I CCWWGG 3 cut(s) 561, 1024, 1334
Eco31I GGTCTC 1 cut(s) 897
Eco88I CYCGRG 1 cut(s) 722
Eco91I GGTNACC 1 cut(s) 445
EcoO65I GGTNACC 1 cut(s) 445
EcoRII CCWGG 4 cut(s) 472, 484, 739, 815
EcoT14I CCWWGG 3 cut(s) 561, 1024, 1334
ErhI CCWWGG 3 cut(s) 561, 1024, 1334
FaeI CATG 5 cut(s) 141, 275, 281, 733, 1450
FatI CATG 5 cut(s) 137, 271, 277, 729, 1446
FauI CCCGC 1 cut(s) 1470
FauNDI CATATG 1 cut(s) 237
FbaI TGATCA 1 cut(s) 72
FblI GTMKAC 1 cut(s) 1314
Fnu4HI GCNGC 9 cut(s) 9, 426, 1008, 1011, 1066, 1075, 1207, 1215, 1537
FokI GGATG 4 cut(s) 17, 512, 858, 1019
Fsp4HI GCNGC 9 cut(s) 9, 426, 1008, 1011, 1066, 1075, 1207, 1215, 1537
FspBI CTAG 7 cut(s) 110, 218, 750, 765, 881, 995, 1553
GluI GCNGC 9 cut(s) 9, 426, 1008, 1011, 1066, 1075, 1207, 1215, 1537
GsuI CTGGAG 2 cut(s) 456, 1474
HaeIII GGCC 6 cut(s) 554, 560, 677, 870, 1107, 1272
HapII CCGG 1 cut(s) 1104
Hin1II CATG 5 cut(s) 141, 275, 281, 733, 1450
HincII GTYRAC 2 cut(s) 1462, 1574
HindII GTYRAC 2 cut(s) 1462, 1574
HindIII AAGCTT 2 cut(s) 856, 1435
HinfI GANTC 1 cut(s) 718
HpaI GTTAAC 1 cut(s) 1462
HpaII CCGG 1 cut(s) 1104
HphI GGTGA 2 cut(s) 500, 1351
Hpy166II GTNNAC 7 cut(s) 91, 364, 645, 1315, 1462, 1471, 1574
Hpy188I TCNGA 6 cut(s) 25, 246, 511, 523, 683, 838
Hpy188III TCNNGA 5 cut(s) 722, 730, 793, 1395, 1441
Hpy8I GTNNAC 7 cut(s) 91, 364, 645, 1315, 1462, 1471, 1574
Hpy99I CGWCG 1 cut(s) 98
HpyAV CCTTC 2 cut(s) 200, 1093
HpyCH4III ACNGT 2 cut(s) 1301, 1409
HpyCH4IV ACGT 2 cut(s) 577, 1114
HpyCH4V TGCA 7 cut(s) 44, 101, 265, 775, 863, 1228, 1309
HpyF10VI GCNNNNNNNGC 7 cut(s) 425, 812, 1004, 1071, 1074, 1159, 1542
HpyF3I CTNAG 3 cut(s) 24, 243, 510
HpySE526I ACGT 2 cut(s) 577, 1114
Hsp92II CATG 5 cut(s) 141, 275, 281, 733, 1450
Ksp22I TGATCA 1 cut(s) 72
KspAI GTTAAC 1 cut(s) 1462
Kzo9I GATC 5 cut(s) 72, 214, 229, 1079, 1180
LguI GCTCTTC 1 cut(s) 600
LmnI GCTCC 2 cut(s) 475, 1034
Lsp1109I GCAGC 7 cut(s) 412, 994, 997, 1077, 1086, 1226, 1548
LweI GCATC 3 cut(s) 88, 166, 1296
MabI ACCWGGT 1 cut(s) 484
MaeI CTAG 7 cut(s) 110, 218, 750, 765, 881, 995, 1553
MaeII ACGT 2 cut(s) 577, 1114
MaeIII GTNAC 5 cut(s) 143, 223, 445, 1110, 1508
MalI GATC 5 cut(s) 74, 216, 231, 1081, 1182
MboI GATC 5 cut(s) 72, 214, 229, 1079, 1180
MfeI CAATTG 2 cut(s) 951, 1232
MflI RGATCY 2 cut(s) 229, 1079
MhlI GDGCHC 2 cut(s) 472, 577
MlsI TGGCCA 2 cut(s) 677, 870
MluCI AATT 7 cut(s) 260, 284, 649, 951, 1037, 1045, 1232
MluNI TGGCCA 2 cut(s) 677, 870
MmeI TCCRAC 1 cut(s) 922
Mox20I TGGCCA 2 cut(s) 677, 870
MscI TGGCCA 2 cut(s) 677, 870
MseI TTAA 5 cut(s) 132, 288, 746, 1461, 1562
MslI CAYNNNNRTG 2 cut(s) 276, 734
Msp20I TGGCCA 2 cut(s) 677, 870
MspA1I CMGCKG 3 cut(s) 977, 1477, 1501
MspI CCGG 1 cut(s) 1104
MspR9I CCNGG 4 cut(s) 474, 486, 741, 817
MunI CAATTG 2 cut(s) 951, 1232
MvaI CCWGG 4 cut(s) 474, 486, 741, 817
MwoI GCNNNNNNNGC 7 cut(s) 425, 812, 1004, 1071, 1074, 1159, 1542
NdeI CATATG 1 cut(s) 237
NdeII GATC 5 cut(s) 72, 214, 229, 1079, 1180
NlaIII CATG 5 cut(s) 141, 275, 281, 733, 1450
NlaIV GGNNCC 3 cut(s) 1030, 1102, 1482
NmeAIII GCCGAG 1 cut(s) 580
NmuCI GTSAC 1 cut(s) 1110
NspI RCATGY 1 cut(s) 275
PaeR7I CTCGAG 1 cut(s) 722
PagI TCATGA 1 cut(s) 729
PciSI GCTCTTC 1 cut(s) 600
PfeI GAWTC 1 cut(s) 718
PflMI CCANNNNNTGG 2 cut(s) 977, 1163
PfoI TCCNGGA 1 cut(s) 472
PkrI GCNGC 9 cut(s) 10, 427, 1009, 1012, 1067, 1076, 1208, 1216, 1538
Ppu21I YACGTR 1 cut(s) 578
PshBI ATTAAT 1 cut(s) 1562
Psp6I CCWGG 4 cut(s) 472, 484, 739, 815
PspEI GGTNACC 1 cut(s) 445
PspGI CCWGG 4 cut(s) 472, 484, 739, 815
PspN4I GGNNCC 3 cut(s) 1030, 1102, 1482
PstNI CAGNNNCTG 1 cut(s) 670
PsuI RGATCY 2 cut(s) 229, 1079
PvuII CAGCTG 2 cut(s) 977, 1501
RsaI GTAC 2 cut(s) 365, 1294
RsaNI GTAC 2 cut(s) 364, 1293
RseI CAYNNNNRTG 2 cut(s) 276, 734
SapI GCTCTTC 1 cut(s) 600
SaqAI TTAA 5 cut(s) 132, 288, 746, 1461, 1562
SatI GCNGC 9 cut(s) 9, 426, 1008, 1011, 1066, 1075, 1207, 1215, 1537
Sau3AI GATC 5 cut(s) 72, 214, 229, 1079, 1180
ScrFI CCNGG 4 cut(s) 474, 486, 741, 817
SduI GDGCHC 2 cut(s) 472, 577
SexAI ACCWGGT 1 cut(s) 484
SfaNI GCATC 3 cut(s) 88, 166, 1296
SfcI CTRYAG 2 cut(s) 12, 114
Sfr274I CTCGAG 1 cut(s) 722
SlaI CTCGAG 1 cut(s) 722
SmiMI CAYNNNNRTG 2 cut(s) 276, 734
SmlI CTYRAG 1 cut(s) 722
SmoI CTYRAG 1 cut(s) 722
SpeI ACTAGT 1 cut(s) 880
Sse9I AATT 7 cut(s) 260, 284, 649, 951, 1037, 1045, 1232
SsiI CCGC 6 cut(s) 8, 312, 806, 1204, 1207, 1477
SspI AATATT 2 cut(s) 911, 1288
SspMI CTAG 7 cut(s) 110, 218, 750, 765, 881, 995, 1553
StyD4I CCNGG 4 cut(s) 472, 484, 739, 815
StyI CCWWGG 3 cut(s) 561, 1024, 1334
TaaI ACNGT 2 cut(s) 1301, 1409
TaiI ACGT 2 cut(s) 580, 1117
TaqI TCGA 5 cut(s) 174, 193, 495, 723, 1440
TasI AATT 7 cut(s) 260, 284, 649, 951, 1037, 1045, 1232
TatI WGTACW 1 cut(s) 363
TauI GCSGC 2 cut(s) 11, 1209
TfiI GAWTC 1 cut(s) 718
Tru1I TTAA 5 cut(s) 132, 288, 746, 1461, 1562
Tru9I TTAA 5 cut(s) 132, 288, 746, 1461, 1562
TscAI CASTG 2 cut(s) 1009, 1546
TseFI GTSAC 1 cut(s) 1110
TseI GCWGC 7 cut(s) 425, 1007, 1010, 1065, 1074, 1214, 1536
Tsp45I GTSAC 1 cut(s) 1110
TspDTI ATGAA 8 cut(s) 224, 263, 294, 618, 718, 746, 1253, 1292
TspRI CASTG 2 cut(s) 1009, 1546
Van91I CCANNNNNTGG 2 cut(s) 977, 1163
VspI ATTAAT 1 cut(s) 1562
XapI RAATTY 2 cut(s) 284, 649
XceI RCATGY 1 cut(s) 275
XcmI CCANNNNNNNNNTGG 2 cut(s) 639, 1498
XhoI CTCGAG 1 cut(s) 722
XmiI GTMKAC 1 cut(s) 1314
XspI CTAG 7 cut(s) 110, 218, 750, 765, 881, 995, 1553
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.