Rroxscaffold_4G00281890
MYB Family

response regulator

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000004
OG0001432
Physical Location & Seq
Reverse (-)
4092620 .. 4100139
7520 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_4G00281890.1

Sequence Viewer

Length: 3525 bp
ATGGATGCAGAGGGAGTTGTTGATCGAGGGAGGCAGTACTCTGCCAATATCAATATCTTGCTTGTCGACGATGATATCACCACTCTAAACATAGTTTCTGCAATGCTCAAAACATGGAGCTATGAAGTTGTGACTGTTCCGAACCCTATAGATGCTCTTTCCATCCTTCGAAAGGGAAAATGCTCCTTTGATCTAGTTGTTACAGATCTCCACATGCCTCAGATGAATGGTTTGGAATTGCAGAAGCTAGTGCATGATGAGTTTGAGCTACCCGTCATTATGATGTCTGCGGATGACAAAGAAAGTGTGATACTGAAGAGTCTAGAGGGAGGAGTTGTGTACTATATAGTAAAGCCTGTGAGCAAAGATGACATAAAAATGGTGTGGCAGTGTGTTGTTCAATCCAGGAAGAGCAGGTCCTCCAGTGTCACCATCGAGGAGATAGTGCAAGGTGCTTCGGGGGAATTTGCATCCGGCCAGCTGCTGCAGGGTCCTGGCGAGCTCGAGGACTTGGATTGCATATCCTTCAACAATGACTTCAATTATAAGGAGGATCACAAAAAGGAACAGTCCAGAAAGAAAAAAACGCGTAAGAGGGATAGGAATGTGGACGATGAACAAGATGACGGTGAACTTGATCGGCGTGTGCTTGCCAAAAAGAAGGCGAAAGTGGTGTGGAGTAATTCACTTCACAATCACTTTCTCTTGGCCATCAGACATATTGGCTTGGACAAGGCTGTGCCAAAGAGAATCCTCGAGTTCATGAATGTGCCTGGCTTGACTAGGGAGAACGTAGCTAGCCATTTGCAGAAGTACCGCATGTTCTTGAAGCGAGTTGCGGAGAAAGCTAGATTGTCAAAGTGCTTGTCTGAGAGGGTATTCAGGTCAAGCTTGGCATTTGGCCTTCCAGCCACACCGTCTTTCAACCATGCCCAACGGGAACAATATGCCGAATACCTCAAACAACAACTGCAGATGAATGACCTGGGAGTCGCATCGCCATTGCAGAATACCCTAGCACCTCTTGGCACTGCTTCCCACCTTGGCTCGAGCTCGTTGCAATTTCCGCTGAATTTCAATCAGCAACCAGCAGCTCTAAACCTAGCTAGCACCAGCAGCGGCCCTCAGTGCCACCAACTCTTTGGTTCGGGGCATTCGCATCTCTTGGTAAACAATACTGTTCAGCAACAGCGTCTAATCCAGCTTGGTAATGGAATGAACACCTTTTCTCAAGCAAACCACGGATCCGATTTTGGAATGCAGATGATGAACAACAACGTTGGACGCATTGGAAGCTATGGCGGTCTGATGAATAATGGTGGAAATGGCCTTATGAATGGTGGTACTAATTGGATGGATATCTACTCGCAACAAAGTCAAGCCAAGCAGCTTCAACAAGCACTCAATTTCACCTCTAACCCGTTCAATTTTGGGACCACACCCAGAATTTCATCTCCAAGCATTGACAACCTGATGAGTCCCTTAACTCCCTTTAACAATGCTAATCTGGGGCCAAACTTCGGCGGCAGAACCAGTCAACCTGCTGGTGGATTCAACAACATTATAAACGGTGGATATAATGGATTGGTCATCAACAATGAAGTTGTCAATGGGTTGACGAACGGAGTTCGTAATGTCAACCTAAATGGTACTACTTTCAATGCACCAACACTGGGGCATATTGGGAATAATGCTTCTTCTTCTTTGTTTGAGACTGGTAGTGCAAACCCATTTGCACCAATTCTCCCTAGGACCAGTCAGCAGCAACAAAATGCTTCACTATTGTTGTCACCACATGGGCTGCAACAGAATCCGTATGGTATGTCATCAACTTTTGGAGGGGGAAACAATGATTTTTCCGTTAGTGCTCTCATGAACAACGCCACGAGAAACATCAACAACATTTCTCTGGCCAATGATGACGATGACATCATGGTGATCAATAATCTGGTCTTGCAGCAGCTCGACAACTGCCAGCCTCCTTCTCATCAGAAACAAGGTGGGGAAGAAGTTCCTGTCAGCTTCACTAGCATGTTATATCAAGATGAAGATCCTGCACCTACTCCTACAATCGATGCACAAGTTCAGCTGAACACTAATCGTGCTGCAAATGGTCTAGTTCAGCTGACCCCTAATCATGTTGCAAATAGTCAAGTTCAGCTGCACCCTAATCCTTCTTTGAATGGCGAAGTTCATCAGCTTAACCCTAATCCTTTTGCGAATGGTCAAGTTCAGCTGAACCCCAATCCTTTTGTGAACGGCCAAAATCAGCAGAACCGTAATCCTGACGCAAGTAGTCAACTTGAGCTGAACCCTTCACCTCCTCCTACTGTCAACTCCCAAGTTCAGCGCAGCCTTAACTCTGCTGTGAACGATGAAGCTCAGCTGAACCCTAATCTTTATATGAACGATCTAAACACTAATGCTGCTGCAAACCGTCAGCTTGACCTGAACCCAACTGCCAACCAAGTTGGGAACCCTAAAATTTTTGGCTTAGGCTCGTACCATATGGAAGATAATGCACCTGATGATGAGCAATCTTGGAGCCTGGAGGAGCAGGGTGGTGATCAACAGATACTCAACTCCGAGTTCAATAGCAACATGTTTCAGACAGATGACTATTCTATTCTATTTGATCAACAATTCGCTGCTCAGGCAAATTGCGTATTCGCTCCCTATTTTCCCTCCAACAATCCTCAAAGATTTGATTCTGTTCATAGAATCTATGGTGCCAGCAATGTTGCCAAAATGCTCGAGCCACTGACACCATATTTTCGAGCTCAAGCCGCCGAGACTTTATGTTATGAGGCTGAAAGTAGAATACACGATCCTGTGTATGGCTGCGCTGCGATTATTTTCCAATTACAGCAGCAAATATATAACACAGAATCTGAATTAGCCAAAACACGTGCTGAGATTGCAGTTATTAGATCCAATGGAAAAGGAAAAGAACCTGAGGTTCAGCCAAGTACTGATCAAGTTCATGATGGGTTTAGCGCCTGCCCTCAGAGTACCATGATGAGACACTCACTTCCCCCTGAAATGGCTTCATCAGGTGAAGTACAGAATATGGTAAACAATGAAGCTATGGTTGTCTTTCCTCAACCGGTGGTCCCTTATAGCTATGCACAAGCTGCTGCAGGAACATCAAATGGCCAGGCTGCACAATCTGAACCTCCTTTTTCGGCCTGGACCGCTGTTTCTCTCTGGCGTGGTAGCGGTGCTGGGAAAGTCTTTGCTGGAAGAGGTGCTGGTAGTTCCACCATGGGGAACCGCACTTTGCGTATCAATGAAGAAGGTAACAATCAACCAAGGGATATGCGAGCTGTAAACAGAAATGGCAGTGTGATTGGCCTCTTTGATCGTGAGATTGATCAGTTCCAAGGTGCAAATGAGGAAATTAATCTTGATTTGGACTTGGCGGCTAACCACAACAGTGTGCTGCTTGATCGAAACAATAGTGAAGGCACTGAGGAGGACCAGTTTGTTGAAAATGCTTTAAAGGACCCTAGCTATGATCTTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044464
KEGG Pathways
Metabolic & Signaling
ko04075 map04075
Pfam Domains
Protein Families
Myb_DNA-binding Response_reg

Protein Analysis

1174

Amino Acids

128.73

Weight (kDa)

5.2

Isoelectric Point (pI)

44.43

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Response_reg PF00072 19 - 126 2.3e-21 Response regulator receiver domain
LOB PF03195 885 - 970 1.4e-27 Lateral organ boundaries (LOB) domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 546, 1565
AasI GACNNNNNNGTC 1 cut(s) 989
Acc36I ACCTGC 2 cut(s) 405, 1549
AccB1I GGYRCC 1 cut(s) 2729
AccI GTMKAC 1 cut(s) 66
AccII CGCG 1 cut(s) 589
AclI AACGTT 1 cut(s) 1278
AclWI GGATC 6 cut(s) 561, 1239, 1252, 2045, 2822, 2925
AcoI YGGCCR 5 cut(s) 475, 708, 1911, 2260, 3154
AcsI RAATTY 4 cut(s) 464, 1072, 1446, 2484
AcuI CTGAAG 1 cut(s) 335
AcvI CACGTG 1 cut(s) 2909
AfaI GTAC 9 cut(s) 38, 341, 815, 1345, 1651, 2504, 2971, 3013, 3063
AfiI CCNNNNNNNGG 7 cut(s) 172, 1520, 1547, 1673, 2837, 3043, 3267
AflIII ACRYGT 3 cut(s) 587, 2601, 2906
AgeI ACCGGT 1 cut(s) 3106
AjnI CCWGG 7 cut(s) 404, 493, 772, 984, 2547, 3156, 3188
AleI CACNNNNGTG 1 cut(s) 3435
Alw21I GWGCWC 4 cut(s) 504, 1055, 1870, 2782
Alw26I GTCTC 3 cut(s) 1706, 2786, 3016
AlwI GGATC 6 cut(s) 561, 1239, 1252, 2045, 2822, 2925
AlwNI CAGNNNCTG 2 cut(s) 484, 2891
Ama87I CYCGRG 4 cut(s) 503, 755, 1048, 2753
ApoI RAATTY 4 cut(s) 464, 1072, 1446, 2484
ArsI GACNNNNNNTTYG 2 cut(s) 851, 883
AseI ATTAAT 1 cut(s) 3402
AsiGI ACCGGT 1 cut(s) 3106
Asp700I GAANNNNTTC 1 cut(s) 2010
AspA2I CCTAGG 1 cut(s) 1748
AspLEI GCGC 3 cut(s) 2352, 2846, 2999
AsuHPI GGTGA 9 cut(s) 70, 421, 641, 1402, 1782, 1948, 2310, 2576, 3068
AsuII TTCGAA 1 cut(s) 169
AsuNHI GCTAGC 2 cut(s) 797, 1106
AvaI CYCGRG 4 cut(s) 503, 755, 1048, 2753
AvaII GGWCC 8 cut(s) 417, 491, 1434, 1752, 3112, 3192, 3478, 3505
AvrII CCTAGG 1 cut(s) 1748
AxyI CCTNAGG 1 cut(s) 2955
BalI TGGCCA 3 cut(s) 710, 1913, 3156
BamHI GGATCC 1 cut(s) 1244
BanI GGYRCC 1 cut(s) 2729
BanII GRGCYC 3 cut(s) 504, 1055, 2782
BauI CACGAG 1 cut(s) 1885
BbrPI CACGTG 1 cut(s) 2909
Bbv12I GWGCWC 4 cut(s) 504, 1055, 1870, 2782
BccI CCATC 5 cut(s) 170, 440, 719, 1348, 2981
BceAI ACGGC 1 cut(s) 2275
BcgI CGANNNNNNTGC 2 cut(s) 1039, 1073
BciT130I CCWGG 7 cut(s) 406, 495, 774, 986, 2549, 3158, 3190
BclI TGATCA 5 cut(s) 1938, 2566, 2635, 2974, 3373
BcoDI GTCTC 3 cut(s) 1706, 2786, 3016
BfmI CTRYAG 4 cut(s) 147, 485, 971, 3138
BfoI RGCGCY 1 cut(s) 3000
BfuAI ACCTGC 2 cut(s) 405, 1549
BglII AGATCT 1 cut(s) 205
BlnI CCTAGG 1 cut(s) 1748
BlpI GCTNAGC 1 cut(s) 2382
BmcAI AGTACT 2 cut(s) 38, 2971
Bme1390I CCNGG 7 cut(s) 406, 495, 774, 986, 2549, 3158, 3190
Bme18I GGWCC 8 cut(s) 417, 491, 1434, 1752, 3112, 3192, 3478, 3505
BmeT110I CYCGRG 4 cut(s) 503, 755, 1048, 2753
BmrFI CCNGG 7 cut(s) 406, 495, 774, 986, 2549, 3158, 3190
BmrI ACTGGG 1 cut(s) 1682
BmsI GCATC 5 cut(s) 142, 479, 1004, 1168, 2065
BmtI GCTAGC 2 cut(s) 801, 1110
BmuI ACTGGG 1 cut(s) 1682
BpmI CTGGAG 2 cut(s) 406, 2570
Bpu10I CCTNAGC 2 cut(s) 2494, 2652
Bpu1102I GCTNAGC 1 cut(s) 2382
Bpu14I TTCGAA 1 cut(s) 169
BpuEI CTTGAG 3 cut(s) 1215, 2324, 2766
Bsa29I ATCGAT 1 cut(s) 2073
BsaAI YACGTR 1 cut(s) 2909
BsaBI GATNNNNATC 2 cut(s) 1358, 2049
BsaJI CCNNGG 7 cut(s) 985, 1042, 1240, 1748, 3264, 3311, 3382
BsaWI WCCGGW 1 cut(s) 3106
BsaXI ACNNNNNCTCC 6 cut(s) 321, 351, 1728, 1758, 3467, 3497
Bsc4I CCNNNNNNNGG 7 cut(s) 172, 1520, 1547, 1673, 2837, 3043, 3267
Bse118I RCCGGY 1 cut(s) 3106
Bse1I ACTGG 6 cut(s) 423, 1533, 1677, 1720, 1755, 3481
Bse21I CCTNAGG 1 cut(s) 2955
Bse3DI GCAATG 3 cut(s) 108, 1001, 2743
Bse8I GATNNNNATC 2 cut(s) 1358, 2049
BseBI CCWGG 7 cut(s) 406, 495, 774, 986, 2549, 3158, 3190
BseCI ATCGAT 1 cut(s) 2073
BseDI CCNNGG 7 cut(s) 985, 1042, 1240, 1748, 3264, 3311, 3382
BseGI GGATG 5 cut(s) 10, 162, 298, 470, 1359
BseJI GATNNNNATC 2 cut(s) 1358, 2049
BseLI CCNNNNNNNGG 7 cut(s) 172, 1520, 1547, 1673, 2837, 3043, 3267
BseMI GCAATG 3 cut(s) 108, 1001, 2743
BseMII CTCAG 9 cut(s) 233, 861, 1139, 2396, 2666, 2904, 2946, 3020, 3462
BseNI ACTGG 6 cut(s) 423, 1533, 1677, 1720, 1755, 3481
BseRI GAGGAG 5 cut(s) 345, 452, 2313, 2567, 3488
BseYI CCCAGC 1 cut(s) 3224
BsgI GTGCAG 3 cut(s) 2040, 2147, 3147
Bsh1236I CGCG 1 cut(s) 589
BshNI GGYRCC 1 cut(s) 2729
BshTI ACCGGT 1 cut(s) 3106
BshVI ATCGAT 1 cut(s) 2073
BsiHKAI GWGCWC 4 cut(s) 504, 1055, 1870, 2782
BsiHKCI CYCGRG 4 cut(s) 503, 755, 1048, 2753
BsiSI CCGG 2 cut(s) 474, 3107
BslFI GGGAC 3 cut(s) 1447, 1464, 3098
BslI CCNNNNNNNGG 7 cut(s) 172, 1520, 1547, 1673, 2837, 3043, 3267
BsmAI GTCTC 3 cut(s) 1706, 2786, 3016
BsmFI GGGAC 3 cut(s) 1447, 1464, 3098
BsmI GAATGC 2 cut(s) 1153, 1263
BsoBI CYCGRG 4 cut(s) 503, 755, 1048, 2753
Bsp119I TTCGAA 1 cut(s) 169
Bsp1286I GDGCHC 4 cut(s) 504, 1055, 1870, 2782
Bsp1720I GCTNAGC 1 cut(s) 2382
Bsp19I CCATGG 1 cut(s) 3264
BspCNI CTCAG 9 cut(s) 232, 862, 1138, 2395, 2665, 2905, 2947, 3019, 3463
BspDI ATCGAT 1 cut(s) 2073
BspFNI CGCG 1 cut(s) 589
BspHI TCATGA 3 cut(s) 762, 1872, 2983
BspMAI CTGCAG 3 cut(s) 489, 975, 3142
BspMI ACCTGC 2 cut(s) 405, 1549
BspOI GCTAGC 2 cut(s) 801, 1110
BspPI GGATC 6 cut(s) 561, 1239, 1252, 2045, 2822, 2925
BspQI GCTCTTC 1 cut(s) 404
BspT104I TTCGAA 1 cut(s) 169
BspT107I GGYRCC 1 cut(s) 2729
BsrDI GCAATG 3 cut(s) 108, 1001, 2743
BsrFI RCCGGY 1 cut(s) 3106
BsrI ACTGG 6 cut(s) 423, 1533, 1677, 1720, 1755, 3481
BssAI RCCGGY 1 cut(s) 3106
BssECI CCNNGG 7 cut(s) 985, 1042, 1240, 1748, 3264, 3311, 3382
BssSI CACGAG 1 cut(s) 1885
BssT1I CCWWGG 5 cut(s) 1042, 1748, 3264, 3311, 3382
Bst2BI CACGAG 1 cut(s) 1885
Bst2UI CCWGG 7 cut(s) 406, 495, 774, 986, 2549, 3158, 3190
Bst6I CTCTTC 3 cut(s) 311, 404, 3238
BstAPI GCANNNNNTGC 1 cut(s) 3134
BstBAI YACGTR 1 cut(s) 2909
BstBI TTCGAA 1 cut(s) 169
BstC8I GCNNGC 9 cut(s) 479, 500, 651, 799, 1108, 1976, 2734, 3001, 3324
BstDSI CCRYGG 2 cut(s) 1240, 3264
BstENI CCTNNNNNAGG 1 cut(s) 170
BstF5I GGATG 5 cut(s) 10, 162, 298, 470, 1359
BstFNI CGCG 1 cut(s) 589
BstH2I RGCGCY 1 cut(s) 3000
BstHHI GCGC 3 cut(s) 2352, 2846, 2999
BstMAI GTCTC 3 cut(s) 1706, 2786, 3016
BstNI CCWGG 7 cut(s) 406, 495, 774, 986, 2549, 3158, 3190
BstNSI RCATGY 4 cut(s) 217, 823, 2035, 2605
BstSCI CCNGG 7 cut(s) 404, 493, 772, 984, 2547, 3156, 3188
BstSFI CTRYAG 4 cut(s) 147, 485, 971, 3138
BstUI CGCG 1 cut(s) 589
BstX2I RGATCY 4 cut(s) 205, 1244, 2050, 2930
BstXI CCANNNNNNTGG 1 cut(s) 1142
BstYI RGATCY 4 cut(s) 205, 1244, 2050, 2930
Bsu15I ATCGAT 1 cut(s) 2073
Bsu36I CCTNAGG 1 cut(s) 2955
BsuTUI ATCGAT 1 cut(s) 2073
BtgI CCRYGG 2 cut(s) 1240, 3264
BtgZI GCGATG 1 cut(s) 981
BtsCI GGATG 5 cut(s) 10, 162, 298, 470, 1359
BtsI GCAGTG 3 cut(s) 395, 1029, 3349
BtsIMutI CAGTG 9 cut(s) 395, 430, 1029, 1133, 1670, 2759, 3349, 3442, 3468
BveI ACCTGC 2 cut(s) 405, 1549
Cac8I GCNNGC 9 cut(s) 479, 500, 651, 799, 1108, 1976, 2734, 3001, 3324
CaiI CAGNNNCTG 2 cut(s) 484, 2891
CciI TCATGA 3 cut(s) 762, 1872, 2983
CfoI GCGC 3 cut(s) 2352, 2846, 2999
Cfr10I RCCGGY 1 cut(s) 3106
ClaI ATCGAT 1 cut(s) 2073
CseI GACGC 3 cut(s) 1181, 1293, 2297
Csp6I GTAC 9 cut(s) 37, 340, 814, 1344, 1650, 2503, 2970, 3012, 3062
CspAI ACCGGT 1 cut(s) 3106
CviQI GTAC 9 cut(s) 37, 340, 814, 1344, 1650, 2503, 2970, 3012, 3062
DraI TTTAAA 1 cut(s) 3501
DrdI GACNNNNNNGTC 1 cut(s) 989
DseDI GACNNNNNNGTC 1 cut(s) 989
EaeI YGGCCR 5 cut(s) 475, 708, 1911, 2260, 3154
Eam1104I CTCTTC 3 cut(s) 311, 404, 3238
EarI CTCTTC 3 cut(s) 311, 404, 3238
Ecl136II GAGCTC 3 cut(s) 502, 1053, 2780
Eco130I CCWWGG 5 cut(s) 1042, 1748, 3264, 3311, 3382
Eco24I GRGCYC 3 cut(s) 504, 1055, 2782
Eco32I GATATC 2 cut(s) 76, 1360
Eco47I GGWCC 8 cut(s) 417, 491, 1434, 1752, 3112, 3192, 3478, 3505
Eco53kI GAGCTC 3 cut(s) 502, 1053, 2780
Eco57I CTGAAG 1 cut(s) 335
Eco72I CACGTG 1 cut(s) 2909
Eco81I CCTNAGG 1 cut(s) 2955
Eco88I CYCGRG 4 cut(s) 503, 755, 1048, 2753
EcoICRI GAGCTC 3 cut(s) 502, 1053, 2780
EcoNI CCTNNNNNAGG 1 cut(s) 170
EcoO109I RGGNCCY 3 cut(s) 417, 491, 3505
EcoRII CCWGG 7 cut(s) 404, 493, 772, 984, 2547, 3156, 3188
EcoRV GATATC 2 cut(s) 76, 1360
EcoT14I CCWWGG 5 cut(s) 1042, 1748, 3264, 3311, 3382
EcoT38I GRGCYC 3 cut(s) 504, 1055, 2782
ErhI CCWWGG 5 cut(s) 1042, 1748, 3264, 3311, 3382
FaqI GGGAC 3 cut(s) 1447, 1464, 3098
FauNDI CATATG 1 cut(s) 2508
FbaI TGATCA 5 cut(s) 1938, 2566, 2635, 2974, 3373
FblI GTMKAC 1 cut(s) 66
FokI GGATG 5 cut(s) 17, 149, 305, 457, 1366
FriOI GRGCYC 3 cut(s) 504, 1055, 2782
GlaI GCGC 3 cut(s) 2351, 2845, 2998
GsaI CCCAGC 1 cut(s) 3228
GsuI CTGGAG 2 cut(s) 406, 2570
HaeII RGCGCY 1 cut(s) 3000
HapII CCGG 2 cut(s) 474, 3107
HgaI GACGC 3 cut(s) 1181, 1293, 2297
HhaI GCGC 3 cut(s) 2352, 2846, 2999
Hin6I GCGC 3 cut(s) 2350, 2844, 2997
HinP1I GCGC 3 cut(s) 2350, 2844, 2997
HincII GTYRAC 6 cut(s) 67, 1538, 1617, 1639, 2300, 2335
HindII GTYRAC 6 cut(s) 67, 1538, 1617, 1639, 2300, 2335
HindIII AAGCTT 1 cut(s) 889
HinfI GANTC 9 cut(s) 319, 750, 990, 1477, 1551, 1810, 2708, 2721, 2888
HpaII CCGG 2 cut(s) 474, 3107
HphI GGTGA 9 cut(s) 70, 421, 641, 1402, 1782, 1948, 2310, 2576, 3068
Hpy99I CGWCG 1 cut(s) 71
HpyAV CCTTC 9 cut(s) 176, 535, 655, 914, 1992, 2184, 2325, 3290, 3458
HpyCH4IV ACGT 3 cut(s) 792, 1278, 2908
HpySE526I ACGT 3 cut(s) 792, 1278, 2908
HspAI GCGC 3 cut(s) 2350, 2844, 2997
Ksp22I TGATCA 5 cut(s) 1938, 2566, 2635, 2974, 3373
LguI GCTCTTC 1 cut(s) 404
LmnI GCTCC 5 cut(s) 117, 188, 2544, 2554, 2677
LweI GCATC 5 cut(s) 142, 479, 1004, 1168, 2065
MaeII ACGT 3 cut(s) 792, 1278, 2908
MaeIII GTNAC 5 cut(s) 130, 199, 427, 1788, 3299
MboII GAAGA 9 cut(s) 328, 421, 1689, 1692, 2018, 2060, 2525, 3255, 3305
MflI RGATCY 4 cut(s) 205, 1244, 2050, 2930
MhlI GDGCHC 4 cut(s) 504, 1055, 1870, 2782
MlsI TGGCCA 3 cut(s) 710, 1913, 3156
MluI ACGCGT 1 cut(s) 587
MluNI TGGCCA 3 cut(s) 710, 1913, 3156
MlyI GAGTC 3 cut(s) 328, 999, 1486
MmeI TCCRAC 2 cut(s) 1261, 2712
Mox20I TGGCCA 3 cut(s) 710, 1913, 3156
MroXI GAANNNNTTC 1 cut(s) 2010
MscI TGGCCA 3 cut(s) 710, 1913, 3156
MseI TTAA 6 cut(s) 1484, 1494, 2202, 2358, 3402, 3500
MslI CAYNNNNRTG 6 cut(s) 281, 377, 767, 1934, 2030, 3435
Msp20I TGGCCA 3 cut(s) 710, 1913, 3156
MspA1I CMGCKG 9 cut(s) 481, 1069, 1119, 2089, 2125, 2161, 2236, 2386, 3197
MspI CCGG 2 cut(s) 474, 3107
MspR9I CCNGG 7 cut(s) 406, 495, 774, 986, 2549, 3158, 3190
Mva1269I GAATGC 2 cut(s) 1153, 1263
MvaI CCWGG 7 cut(s) 406, 495, 774, 986, 2549, 3158, 3190
MvnI CGCG 1 cut(s) 589
NcoI CCATGG 1 cut(s) 3264
NdeI CATATG 1 cut(s) 2508
NheI GCTAGC 2 cut(s) 797, 1106
NmeAIII GCCGAG 1 cut(s) 2815
NmuCI GTSAC 3 cut(s) 130, 427, 1788
NspI RCATGY 4 cut(s) 217, 823, 2035, 2605
NspV TTCGAA 1 cut(s) 169
OliI CACNNNNGTG 1 cut(s) 3435
PaeR7I CTCGAG 4 cut(s) 503, 755, 1048, 2753
PagI TCATGA 3 cut(s) 762, 1872, 2983
PciI ACATGT 1 cut(s) 2601
PciSI GCTCTTC 1 cut(s) 404
PctI GAATGC 2 cut(s) 1153, 1263
PdmI GAANNNNTTC 1 cut(s) 2010
PfeI GAWTC 6 cut(s) 750, 1551, 1810, 2708, 2721, 2888
PfoI TCCNGGA 1 cut(s) 404
PinAI ACCGGT 1 cut(s) 3106
PleI GAGTC 3 cut(s) 327, 998, 1485
PmaCI CACGTG 1 cut(s) 2909
PmlI CACGTG 1 cut(s) 2909
PpsI GAGTC 3 cut(s) 327, 998, 1485
Ppu21I YACGTR 1 cut(s) 2909
PpuMI RGGWCCY 3 cut(s) 417, 491, 3505
PscI ACATGT 1 cut(s) 2601
PshBI ATTAAT 1 cut(s) 3402
PsiI TTATAA 2 cut(s) 546, 1565
Psp124BI GAGCTC 3 cut(s) 504, 1055, 2782
Psp1406I AACGTT 1 cut(s) 1278
Psp5II RGGWCCY 3 cut(s) 417, 491, 3505
Psp6I CCWGG 7 cut(s) 404, 493, 772, 984, 2547, 3156, 3188
PspCI CACGTG 1 cut(s) 2909
PspFI CCCAGC 1 cut(s) 3224
PspGI CCWGG 7 cut(s) 404, 493, 772, 984, 2547, 3156, 3188
PspPPI RGGWCCY 3 cut(s) 417, 491, 3505
PspXI VCTCGAGB 4 cut(s) 503, 755, 1048, 2753
PsrI GAACNNNNNNTAC 2 cut(s) 806, 838
PstI CTGCAG 3 cut(s) 489, 975, 3142
PstNI CAGNNNCTG 2 cut(s) 484, 2891
PsuI RGATCY 4 cut(s) 205, 1244, 2050, 2930
PvuII CAGCTG 6 cut(s) 481, 2089, 2125, 2161, 2236, 2386
RsaI GTAC 9 cut(s) 38, 341, 815, 1345, 1651, 2504, 2971, 3013, 3063
RsaNI GTAC 9 cut(s) 37, 340, 814, 1344, 1650, 2503, 2970, 3012, 3062
RseI CAYNNNNRTG 6 cut(s) 281, 377, 767, 1934, 2030, 3435
SacI GAGCTC 3 cut(s) 504, 1055, 2782
SalI GTCGAC 1 cut(s) 65
SapI GCTCTTC 1 cut(s) 404
SaqAI TTAA 6 cut(s) 1484, 1494, 2202, 2358, 3402, 3500
ScaI AGTACT 2 cut(s) 38, 2971
SchI GAGTC 3 cut(s) 328, 999, 1486
ScrFI CCNGG 7 cut(s) 406, 495, 774, 986, 2549, 3158, 3190
SduI GDGCHC 4 cut(s) 504, 1055, 1870, 2782
SfaNI GCATC 5 cut(s) 142, 479, 1004, 1168, 2065
SfcI CTRYAG 4 cut(s) 147, 485, 971, 3138
Sfr274I CTCGAG 4 cut(s) 503, 755, 1048, 2753
SfuI TTCGAA 1 cut(s) 169
SinI GGWCC 8 cut(s) 417, 491, 1434, 1752, 3112, 3192, 3478, 3505
SlaI CTCGAG 4 cut(s) 503, 755, 1048, 2753
SmiMI CAYNNNNRTG 6 cut(s) 281, 377, 767, 1934, 2030, 3435
SmlI CTYRAG 7 cut(s) 503, 755, 1048, 1230, 2303, 2753, 2781
SmoI CTYRAG 7 cut(s) 503, 755, 1048, 1230, 2303, 2753, 2781
SstI GAGCTC 3 cut(s) 504, 1055, 2782
StyD4I CCNGG 7 cut(s) 404, 493, 772, 984, 2547, 3156, 3188
StyI CCWWGG 5 cut(s) 1042, 1748, 3264, 3311, 3382
TaiI ACGT 3 cut(s) 795, 1281, 2911
TatI WGTACW 4 cut(s) 36, 339, 2969, 3061
TauI GCSGC 4 cut(s) 1122, 1527, 2789, 3425
TfiI GAWTC 6 cut(s) 750, 1551, 1810, 2708, 2721, 2888
Tru1I TTAA 6 cut(s) 1484, 1494, 2202, 2358, 3402, 3500
Tru9I TTAA 6 cut(s) 1484, 1494, 2202, 2358, 3402, 3500
TscAI CASTG 9 cut(s) 395, 430, 1036, 1133, 1677, 2766, 3349, 3442, 3475
TseFI GTSAC 3 cut(s) 130, 427, 1788
Tsp45I GTSAC 3 cut(s) 130, 427, 1788
TspGWI ACGGA 4 cut(s) 1257, 1638, 1803, 1849
TspRI CASTG 9 cut(s) 395, 430, 1036, 1133, 1677, 2766, 3349, 3442, 3475
VpaK11BI GGWCC 8 cut(s) 417, 491, 1434, 1752, 3112, 3192, 3478, 3505
VspI ATTAAT 1 cut(s) 3402
XagI CCTNNNNNAGG 1 cut(s) 170
XapI RAATTY 4 cut(s) 464, 1072, 1446, 2484
XbaI TCTAGA 1 cut(s) 322
XceI RCATGY 4 cut(s) 217, 823, 2035, 2605
XcmI CCANNNNNNNNNTGG 2 cut(s) 1139, 1208
XhoI CTCGAG 4 cut(s) 503, 755, 1048, 2753
XmaJI CCTAGG 1 cut(s) 1748
XmiI GTMKAC 1 cut(s) 66
XmnI GAANNNNTTC 1 cut(s) 2010
ZrmI AGTACT 2 cut(s) 38, 2971
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.