response regulator
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| Response_reg | PF00072 | 19 - 126 | 1.5e-21 | Response regulator receiver domain |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 2 cut(s) | 546, 1556 |
| AarI | CACCTGC | 1 cut(s) | 405 |
| Acc36I | ACCTGC | 2 cut(s) | 405, 1540 |
| AccI | GTMKAC | 1 cut(s) | 66 |
| AccII | CGCG | 2 cut(s) | 589, 643 |
| AciI | CCGC | 9 cut(s) | 290, 641, 817, 839, 998, 1067, 1119, 1302, 1515 |
| AclI | AACGTT | 1 cut(s) | 1278 |
| AclWI | GGATC | 4 cut(s) | 213, 561, 632, 2036 |
| AcoI | YGGCCR | 3 cut(s) | 475, 708, 1902 |
| AcsI | RAATTY | 3 cut(s) | 464, 1446, 2475 |
| AcuI | CTGAAG | 1 cut(s) | 335 |
| AdeI | CACNNNGTG | 1 cut(s) | 1991 |
| AfaI | GTAC | 7 cut(s) | 38, 341, 815, 1345, 1642, 2495, 2557 |
| AfiI | CCNNNNNNNGG | 6 cut(s) | 172, 494, 1511, 1538, 1664, 1665 |
| AflIII | ACRYGT | 1 cut(s) | 587 |
| AgsI | TTSAA | 9 cut(s) | 401, 529, 541, 829, 925, 1394, 1426, 1651, 2173 |
| AjnI | CCWGG | 4 cut(s) | 404, 772, 984, 2538 |
| Alw21I | GWGCWC | 3 cut(s) | 422, 504, 1055 |
| Alw26I | GTCTC | 1 cut(s) | 1697 |
| AlwI | GGATC | 4 cut(s) | 213, 561, 632, 2036 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 484 |
| Ama87I | CYCGRG | 3 cut(s) | 503, 755, 1048 |
| AoxI | GGCC | 7 cut(s) | 475, 708, 901, 1120, 1327, 1502, 1902 |
| ApoI | RAATTY | 3 cut(s) | 464, 1446, 2475 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 851, 883 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 2001 |
| AspA2I | CCTAGG | 1 cut(s) | 1739 |
| AspLEI | GCGC | 1 cut(s) | 2343 |
| AspS9I | GGNCC | 4 cut(s) | 1121, 1434, 1502, 1743 |
| AsuC2I | CCSGG | 1 cut(s) | 489 |
| AsuHPI | GGTGA | 8 cut(s) | 70, 421, 509, 641, 1402, 1773, 1939, 2301 |
| AsuII | TTCGAA | 1 cut(s) | 169 |
| AsuNHI | GCTAGC | 2 cut(s) | 797, 1106 |
| AvaI | CYCGRG | 3 cut(s) | 503, 755, 1048 |
| AvaII | GGWCC | 2 cut(s) | 1434, 1743 |
| AvrII | CCTAGG | 1 cut(s) | 1739 |
| BalI | TGGCCA | 2 cut(s) | 710, 1904 |
| BanII | GRGCYC | 2 cut(s) | 504, 1055 |
| BauI | CACGAG | 1 cut(s) | 1876 |
| Bbv12I | GWGCWC | 3 cut(s) | 422, 504, 1055 |
| BccI | CCATC | 3 cut(s) | 440, 719, 1348 |
| BceAI | ACGGC | 2 cut(s) | 985, 1258 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 1039, 1073 |
| BciT130I | CCWGG | 4 cut(s) | 406, 774, 986, 2540 |
| BciVI | GTATCC | 1 cut(s) | 2619 |
| BclI | TGATCA | 1 cut(s) | 1929 |
| BcnI | CCSGG | 1 cut(s) | 489 |
| BcoDI | GTCTC | 1 cut(s) | 1697 |
| BfmI | CTRYAG | 2 cut(s) | 147, 971 |
| BfuAI | ACCTGC | 2 cut(s) | 405, 1540 |
| BfuI | GTATCC | 1 cut(s) | 2619 |
| BlnI | CCTAGG | 1 cut(s) | 1739 |
| BlpI | GCTNAGC | 1 cut(s) | 2373 |
| BmcAI | AGTACT | 1 cut(s) | 38 |
| Bme1390I | CCNGG | 5 cut(s) | 406, 489, 774, 986, 2540 |
| Bme18I | GGWCC | 2 cut(s) | 1434, 1743 |
| BmeT110I | CYCGRG | 3 cut(s) | 503, 755, 1048 |
| BmgT120I | GGNCC | 4 cut(s) | 1121, 1434, 1502, 1743 |
| BmiI | GGNNCC | 5 cut(s) | 1246, 1435, 1503, 2468, 2537 |
| BmrFI | CCNGG | 5 cut(s) | 406, 489, 774, 986, 2540 |
| BmrI | ACTGGG | 1 cut(s) | 1673 |
| BmsI | GCATC | 5 cut(s) | 142, 479, 1168, 2056, 2269 |
| BmtI | GCTAGC | 2 cut(s) | 801, 1110 |
| BmuI | ACTGGG | 1 cut(s) | 1673 |
| BpmI | CTGGAG | 2 cut(s) | 406, 556 |
| Bpu10I | CCTNAGC | 1 cut(s) | 2485 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 2373 |
| Bpu14I | TTCGAA | 1 cut(s) | 169 |
| BpuEI | CTTGAG | 2 cut(s) | 1215, 2315 |
| BpuMI | CCSGG | 1 cut(s) | 489 |
| Bsa29I | ATCGAT | 1 cut(s) | 2064 |
| BsaBI | GATNNNNATC | 2 cut(s) | 1358, 2040 |
| BsaJI | CCNNGG | 5 cut(s) | 985, 1042, 1240, 1510, 1739 |
| BsaXI | ACNNNNNCTCC | 6 cut(s) | 321, 351, 1229, 1259, 1719, 1749 |
| Bsc4I | CCNNNNNNNGG | 6 cut(s) | 172, 494, 1511, 1538, 1664, 1665 |
| Bse1I | ACTGG | 6 cut(s) | 423, 573, 1524, 1668, 1711, 1746 |
| Bse3DI | GCAATG | 1 cut(s) | 108 |
| Bse8I | GATNNNNATC | 2 cut(s) | 1358, 2040 |
| BseBI | CCWGG | 4 cut(s) | 406, 774, 986, 2540 |
| BseCI | ATCGAT | 1 cut(s) | 2064 |
| BseDI | CCNNGG | 5 cut(s) | 985, 1042, 1240, 1510, 1739 |
| BseGI | GGATG | 5 cut(s) | 10, 298, 470, 1359, 1571 |
| BseJI | GATNNNNATC | 2 cut(s) | 1358, 2040 |
| BseLI | CCNNNNNNNGG | 6 cut(s) | 172, 494, 1511, 1538, 1664, 1665 |
| BseMI | GCAATG | 1 cut(s) | 108 |
| BseMII | CTCAG | 4 cut(s) | 233, 861, 1139, 2387 |
| BseNI | ACTGG | 6 cut(s) | 423, 573, 1524, 1668, 1711, 1746 |
| BseRI | GAGGAG | 3 cut(s) | 345, 452, 2304 |
| BsgI | GTGCAG | 1 cut(s) | 2031 |
| Bsh1236I | CGCG | 2 cut(s) | 589, 643 |
| BshFI | GGCC | 7 cut(s) | 477, 710, 903, 1122, 1329, 1504, 1904 |
| BshVI | ATCGAT | 1 cut(s) | 2064 |
| BsiHKAI | GWGCWC | 3 cut(s) | 422, 504, 1055 |
| BsiHKCI | CYCGRG | 3 cut(s) | 503, 755, 1048 |
| BsiSI | CCGG | 2 cut(s) | 474, 488 |
| BslFI | GGGAC | 3 cut(s) | 1002, 1447, 1464 |
| BslI | CCNNNNNNNGG | 6 cut(s) | 172, 494, 1511, 1538, 1664, 1665 |
| BsmAI | GTCTC | 1 cut(s) | 1697 |
| BsmFI | GGGAC | 3 cut(s) | 1002, 1447, 1464 |
| BsmI | GAATGC | 2 cut(s) | 1263, 2588 |
| BsnI | GGCC | 7 cut(s) | 477, 710, 903, 1122, 1329, 1504, 1904 |
| BsoBI | CYCGRG | 3 cut(s) | 503, 755, 1048 |
| Bsp119I | TTCGAA | 1 cut(s) | 169 |
| Bsp1286I | GDGCHC | 3 cut(s) | 422, 504, 1055 |
| Bsp143I | GATC | 8 cut(s) | 22, 190, 205, 553, 637, 1929, 2041, 2401 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 2373 |
| BspACI | CCGC | 9 cut(s) | 290, 641, 817, 839, 998, 1067, 1119, 1302, 1515 |
| BspANI | GGCC | 7 cut(s) | 477, 710, 903, 1122, 1329, 1504, 1904 |
| BspCNI | CTCAG | 4 cut(s) | 232, 862, 1138, 2386 |
| BspDI | ATCGAT | 1 cut(s) | 2064 |
| BspFNI | CGCG | 2 cut(s) | 589, 643 |
| BspHI | TCATGA | 2 cut(s) | 762, 1863 |
| BspLI | GGNNCC | 5 cut(s) | 1246, 1435, 1503, 2468, 2537 |
| BspMAI | CTGCAG | 1 cut(s) | 975 |
| BspMI | ACCTGC | 2 cut(s) | 405, 1540 |
| BspOI | GCTAGC | 2 cut(s) | 801, 1110 |
| BspPI | GGATC | 4 cut(s) | 213, 561, 632, 2036 |
| BspQI | GCTCTTC | 1 cut(s) | 404 |
| BspT104I | TTCGAA | 1 cut(s) | 169 |
| BsrDI | GCAATG | 1 cut(s) | 108 |
| BsrI | ACTGG | 6 cut(s) | 423, 573, 1524, 1668, 1711, 1746 |
| BssECI | CCNNGG | 5 cut(s) | 985, 1042, 1240, 1510, 1739 |
| BssMI | GATC | 8 cut(s) | 22, 190, 205, 553, 637, 1929, 2041, 2401 |
| BssSI | CACGAG | 1 cut(s) | 1876 |
| BssT1I | CCWWGG | 2 cut(s) | 1042, 1739 |
| Bst2BI | CACGAG | 1 cut(s) | 1876 |
| Bst2UI | CCWGG | 4 cut(s) | 406, 774, 986, 2540 |
| Bst6I | CTCTTC | 2 cut(s) | 311, 404 |
| BstBI | TTCGAA | 1 cut(s) | 169 |
| BstC8I | GCNNGC | 5 cut(s) | 479, 651, 799, 1108, 1967 |
| BstDEI | CTNAG | 6 cut(s) | 219, 511, 870, 1125, 2373, 2485 |
| BstDSI | CCRYGG | 1 cut(s) | 1240 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 170 |
| BstF5I | GGATG | 5 cut(s) | 10, 298, 470, 1359, 1571 |
| BstFNI | CGCG | 2 cut(s) | 589, 643 |
| BstHHI | GCGC | 1 cut(s) | 2343 |
| BstKTI | GATC | 8 cut(s) | 25, 193, 208, 556, 640, 1932, 2044, 2404 |
| BstMAI | GTCTC | 1 cut(s) | 1697 |
| BstMBI | GATC | 8 cut(s) | 22, 190, 205, 553, 637, 1929, 2041, 2401 |
| BstMWI | GCNNNNNNNGC | 6 cut(s) | 845, 1066, 1116, 1128, 1293, 2019 |
| BstNI | CCWGG | 4 cut(s) | 406, 774, 986, 2540 |
| BstNSI | RCATGY | 3 cut(s) | 217, 823, 2026 |
| BstSCI | CCNGG | 5 cut(s) | 404, 487, 772, 984, 2538 |
| BstSFI | CTRYAG | 2 cut(s) | 147, 971 |
| BstUI | CGCG | 2 cut(s) | 589, 643 |
| BstX2I | RGATCY | 2 cut(s) | 205, 2041 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 1142 |
| BstYI | RGATCY | 2 cut(s) | 205, 2041 |
| Bsu15I | ATCGAT | 1 cut(s) | 2064 |
| BsuI | GTATCC | 1 cut(s) | 2619 |
| BsuRI | GGCC | 7 cut(s) | 477, 710, 903, 1122, 1329, 1504, 1904 |
| BsuTUI | ATCGAT | 1 cut(s) | 2064 |
| BtgI | CCRYGG | 1 cut(s) | 1240 |
| BtsCI | GGATG | 5 cut(s) | 10, 298, 470, 1359, 1571 |
| BtsI | GCAGTG | 2 cut(s) | 395, 1029 |
| BtsIMutI | CAGTG | 5 cut(s) | 395, 430, 1029, 1133, 1661 |
| BveI | ACCTGC | 2 cut(s) | 405, 1540 |
| Cac8I | GCNNGC | 5 cut(s) | 479, 651, 799, 1108, 1967 |
| CaiI | CAGNNNCTG | 1 cut(s) | 484 |
| CciI | TCATGA | 2 cut(s) | 762, 1863 |
| CfoI | GCGC | 1 cut(s) | 2343 |
| Cfr13I | GGNCC | 4 cut(s) | 1121, 1434, 1502, 1743 |
| ClaI | ATCGAT | 1 cut(s) | 2064 |
| CseI | GACGC | 1 cut(s) | 1293 |
| Csp6I | GTAC | 7 cut(s) | 37, 340, 814, 1344, 1641, 2494, 2556 |
| CviQI | GTAC | 7 cut(s) | 37, 340, 814, 1344, 1641, 2494, 2556 |
| DdeI | CTNAG | 6 cut(s) | 219, 511, 870, 1125, 2373, 2485 |
| DpnI | GATC | 8 cut(s) | 24, 192, 207, 555, 639, 1931, 2043, 2403 |
| DpnII | GATC | 8 cut(s) | 22, 190, 205, 553, 637, 1929, 2041, 2401 |
| DraIII | CACNNNGTG | 1 cut(s) | 1991 |
| EaeI | YGGCCR | 3 cut(s) | 475, 708, 1902 |
| Eam1104I | CTCTTC | 2 cut(s) | 311, 404 |
| EarI | CTCTTC | 2 cut(s) | 311, 404 |
| Ecl136II | GAGCTC | 2 cut(s) | 502, 1053 |
| Eco130I | CCWWGG | 2 cut(s) | 1042, 1739 |
| Eco24I | GRGCYC | 2 cut(s) | 504, 1055 |
| Eco32I | GATATC | 2 cut(s) | 76, 1360 |
| Eco47I | GGWCC | 2 cut(s) | 1434, 1743 |
| Eco53kI | GAGCTC | 2 cut(s) | 502, 1053 |
| Eco57I | CTGAAG | 1 cut(s) | 335 |
| Eco88I | CYCGRG | 3 cut(s) | 503, 755, 1048 |
| EcoICRI | GAGCTC | 2 cut(s) | 502, 1053 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 170 |
| EcoRII | CCWGG | 4 cut(s) | 404, 772, 984, 2538 |
| EcoRV | GATATC | 2 cut(s) | 76, 1360 |
| EcoT14I | CCWWGG | 2 cut(s) | 1042, 1739 |
| EcoT38I | GRGCYC | 2 cut(s) | 504, 1055 |
| ErhI | CCWWGG | 2 cut(s) | 1042, 1739 |
| FaqI | GGGAC | 3 cut(s) | 1002, 1447, 1464 |
| FauNDI | CATATG | 1 cut(s) | 2499 |
| FbaI | TGATCA | 1 cut(s) | 1929 |
| FblI | GTMKAC | 1 cut(s) | 66 |
| FokI | GGATG | 5 cut(s) | 17, 305, 457, 1366, 1578 |
| FriOI | GRGCYC | 2 cut(s) | 504, 1055 |
| GlaI | GCGC | 1 cut(s) | 2342 |
| GsuI | CTGGAG | 2 cut(s) | 406, 556 |
| HaeIII | GGCC | 7 cut(s) | 477, 710, 903, 1122, 1329, 1504, 1904 |
| HapII | CCGG | 2 cut(s) | 474, 488 |
| HgaI | GACGC | 1 cut(s) | 1293 |
| HhaI | GCGC | 1 cut(s) | 2343 |
| Hin6I | GCGC | 1 cut(s) | 2341 |
| HinP1I | GCGC | 1 cut(s) | 2341 |
| HincII | GTYRAC | 6 cut(s) | 67, 1529, 1608, 1630, 2291, 2326 |
| HindII | GTYRAC | 6 cut(s) | 67, 1529, 1608, 1630, 2291, 2326 |
| HindIII | AAGCTT | 1 cut(s) | 889 |
| HinfI | GANTC | 5 cut(s) | 319, 750, 990, 1477, 1801 |
| HpaII | CCGG | 2 cut(s) | 474, 488 |
| HphI | GGTGA | 8 cut(s) | 70, 421, 509, 641, 1402, 1773, 1939, 2301 |
| Hpy188I | TCNGA | 8 cut(s) | 141, 222, 716, 871, 1249, 1308, 1983, 2594 |
| Hpy188III | TCNNGA | 7 cut(s) | 323, 459, 763, 826, 1864, 2033, 2276 |
| Hpy99I | CGWCG | 1 cut(s) | 71 |
| HpyAV | CCTTC | 7 cut(s) | 176, 535, 655, 914, 1983, 2175, 2316 |
| HpyCH4IV | ACGT | 3 cut(s) | 792, 1192, 1278 |
| HpyF10VI | GCNNNNNNNGC | 6 cut(s) | 845, 1066, 1116, 1128, 1293, 2019 |
| HpyF3I | CTNAG | 6 cut(s) | 219, 511, 870, 1125, 2373, 2485 |
| HpySE526I | ACGT | 3 cut(s) | 792, 1192, 1278 |
| HspAI | GCGC | 1 cut(s) | 2341 |
| Ksp22I | TGATCA | 1 cut(s) | 1929 |
| Kzo9I | GATC | 8 cut(s) | 22, 190, 205, 553, 637, 1929, 2041, 2401 |
| LguI | GCTCTTC | 1 cut(s) | 404 |
| LmnI | GCTCC | 4 cut(s) | 188, 425, 1250, 2535 |
| LweI | GCATC | 5 cut(s) | 142, 479, 1168, 2056, 2269 |
| MaeII | ACGT | 3 cut(s) | 792, 1192, 1278 |
| MaeIII | GTNAC | 5 cut(s) | 130, 199, 427, 1779, 1852 |
| MalI | GATC | 8 cut(s) | 24, 192, 207, 555, 639, 1931, 2043, 2403 |
| MboI | GATC | 8 cut(s) | 22, 190, 205, 553, 637, 1929, 2041, 2401 |
| MboII | GAAGA | 9 cut(s) | 328, 421, 629, 632, 1680, 1683, 2009, 2051, 2516 |
| MflI | RGATCY | 2 cut(s) | 205, 2041 |
| MhlI | GDGCHC | 3 cut(s) | 422, 504, 1055 |
| MlsI | TGGCCA | 2 cut(s) | 710, 1904 |
| MluI | ACGCGT | 1 cut(s) | 587 |
| MluNI | TGGCCA | 2 cut(s) | 710, 1904 |
| MlyI | GAGTC | 3 cut(s) | 328, 984, 1486 |
| MmeI | TCCRAC | 1 cut(s) | 1261 |
| Mox20I | TGGCCA | 2 cut(s) | 710, 1904 |
| MroXI | GAANNNNTTC | 1 cut(s) | 2001 |
| MscI | TGGCCA | 2 cut(s) | 710, 1904 |
| MseI | TTAA | 4 cut(s) | 1485, 2193, 2349, 2564 |
| MslI | CAYNNNNRTG | 5 cut(s) | 281, 377, 767, 1925, 2021 |
| Msp20I | TGGCCA | 2 cut(s) | 710, 1904 |
| MspA1I | CMGCKG | 8 cut(s) | 481, 1069, 1119, 2080, 2116, 2152, 2227, 2377 |
| MspI | CCGG | 2 cut(s) | 474, 488 |
| MspR9I | CCNGG | 5 cut(s) | 406, 489, 774, 986, 2540 |
| Mva1269I | GAATGC | 2 cut(s) | 1263, 2588 |
| MvaI | CCWGG | 4 cut(s) | 406, 774, 986, 2540 |
| MvnI | CGCG | 2 cut(s) | 589, 643 |
| MwoI | GCNNNNNNNGC | 6 cut(s) | 845, 1066, 1116, 1128, 1293, 2019 |
| NciI | CCSGG | 1 cut(s) | 489 |
| NdeI | CATATG | 1 cut(s) | 2499 |
| NdeII | GATC | 8 cut(s) | 22, 190, 205, 553, 637, 1929, 2041, 2401 |
| NheI | GCTAGC | 2 cut(s) | 797, 1106 |
| NlaIV | GGNNCC | 5 cut(s) | 1246, 1435, 1503, 2468, 2537 |
| NmeAIII | GCCGAG | 1 cut(s) | 1491 |
| NmuCI | GTSAC | 3 cut(s) | 130, 427, 1779 |
| NspI | RCATGY | 3 cut(s) | 217, 823, 2026 |
| NspV | TTCGAA | 1 cut(s) | 169 |
| PaeR7I | CTCGAG | 3 cut(s) | 503, 755, 1048 |
| PagI | TCATGA | 2 cut(s) | 762, 1863 |
| PaqCI | CACCTGC | 1 cut(s) | 405 |
| PciSI | GCTCTTC | 1 cut(s) | 404 |
| PctI | GAATGC | 2 cut(s) | 1263, 2588 |
| PdmI | GAANNNNTTC | 1 cut(s) | 2001 |
| PfeI | GAWTC | 2 cut(s) | 750, 1801 |
| PfoI | TCCNGGA | 1 cut(s) | 404 |
| PleI | GAGTC | 3 cut(s) | 327, 984, 1485 |
| PpsI | GAGTC | 3 cut(s) | 327, 984, 1485 |
| PsiI | TTATAA | 2 cut(s) | 546, 1556 |
| Psp124BI | GAGCTC | 2 cut(s) | 504, 1055 |
| Psp1406I | AACGTT | 1 cut(s) | 1278 |
| Psp6I | CCWGG | 4 cut(s) | 404, 772, 984, 2538 |
| PspGI | CCWGG | 4 cut(s) | 404, 772, 984, 2538 |
| PspN4I | GGNNCC | 5 cut(s) | 1246, 1435, 1503, 2468, 2537 |
| PspPI | GGNCC | 4 cut(s) | 1121, 1434, 1502, 1743 |
| PspXI | VCTCGAGB | 3 cut(s) | 503, 755, 1048 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 806, 838 |
| PstI | CTGCAG | 1 cut(s) | 975 |
| PstNI | CAGNNNCTG | 1 cut(s) | 484 |
| PsuI | RGATCY | 2 cut(s) | 205, 2041 |
| PvuII | CAGCTG | 6 cut(s) | 481, 2080, 2116, 2152, 2227, 2377 |
| RsaI | GTAC | 7 cut(s) | 38, 341, 815, 1345, 1642, 2495, 2557 |
| RsaNI | GTAC | 7 cut(s) | 37, 340, 814, 1344, 1641, 2494, 2556 |
| RseI | CAYNNNNRTG | 5 cut(s) | 281, 377, 767, 1925, 2021 |
| SacI | GAGCTC | 2 cut(s) | 504, 1055 |
| SalI | GTCGAC | 1 cut(s) | 65 |
| SapI | GCTCTTC | 1 cut(s) | 404 |
| SaqAI | TTAA | 4 cut(s) | 1485, 2193, 2349, 2564 |
| Sau3AI | GATC | 8 cut(s) | 22, 190, 205, 553, 637, 1929, 2041, 2401 |
| Sau96I | GGNCC | 4 cut(s) | 1121, 1434, 1502, 1743 |
| ScaI | AGTACT | 1 cut(s) | 38 |
| SchI | GAGTC | 3 cut(s) | 328, 984, 1486 |
| ScrFI | CCNGG | 5 cut(s) | 406, 489, 774, 986, 2540 |
| SduI | GDGCHC | 3 cut(s) | 422, 504, 1055 |
| SfaNI | GCATC | 5 cut(s) | 142, 479, 1168, 2056, 2269 |
| SfcI | CTRYAG | 2 cut(s) | 147, 971 |
| Sfr274I | CTCGAG | 3 cut(s) | 503, 755, 1048 |
| SfuI | TTCGAA | 1 cut(s) | 169 |
| SinI | GGWCC | 2 cut(s) | 1434, 1743 |
| SlaI | CTCGAG | 3 cut(s) | 503, 755, 1048 |
| SmiMI | CAYNNNNRTG | 5 cut(s) | 281, 377, 767, 1925, 2021 |
| SmlI | CTYRAG | 5 cut(s) | 503, 755, 1048, 1230, 2294 |
| SmoI | CTYRAG | 5 cut(s) | 503, 755, 1048, 1230, 2294 |
| SsiI | CCGC | 9 cut(s) | 290, 641, 817, 839, 998, 1067, 1119, 1302, 1515 |
| SstI | GAGCTC | 2 cut(s) | 504, 1055 |
| StyD4I | CCNGG | 5 cut(s) | 404, 487, 772, 984, 2538 |
| StyI | CCWWGG | 2 cut(s) | 1042, 1739 |
| TaiI | ACGT | 3 cut(s) | 795, 1195, 1281 |
| TaqI | TCGA | 9 cut(s) | 25, 66, 169, 435, 504, 756, 1049, 1956, 2064 |
| TatI | WGTACW | 2 cut(s) | 36, 339 |
| TauI | GCSGC | 2 cut(s) | 1122, 1518 |
| TfiI | GAWTC | 2 cut(s) | 750, 1801 |
| Tru1I | TTAA | 4 cut(s) | 1485, 2193, 2349, 2564 |
| Tru9I | TTAA | 4 cut(s) | 1485, 2193, 2349, 2564 |
| TscAI | CASTG | 5 cut(s) | 395, 430, 1036, 1133, 1668 |
| TseFI | GTSAC | 3 cut(s) | 130, 427, 1779 |
| Tsp45I | GTSAC | 3 cut(s) | 130, 427, 1779 |
| TspGWI | ACGGA | 5 cut(s) | 218, 1410, 1629, 1794, 1840 |
| TspRI | CASTG | 5 cut(s) | 395, 430, 1036, 1133, 1668 |
| VpaK11BI | GGWCC | 2 cut(s) | 1434, 1743 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 170 |
| XapI | RAATTY | 3 cut(s) | 464, 1446, 2475 |
| XbaI | TCTAGA | 1 cut(s) | 322 |
| XceI | RCATGY | 3 cut(s) | 217, 823, 2026 |
| XcmI | CCANNNNNNNNNTGG | 2 cut(s) | 1139, 1208 |
| XhoI | CTCGAG | 3 cut(s) | 503, 755, 1048 |
| XmaJI | CCTAGG | 1 cut(s) | 1739 |
| XmiI | GTMKAC | 1 cut(s) | 66 |
| XmnI | GAANNNNTTC | 1 cut(s) | 2001 |
| ZrmI | AGTACT | 1 cut(s) | 38 |