Prupe.6G254900_v2.0.a1
MYB Family

response regulator

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp06
Physical Location & Seq
Reverse (-)
24798246 .. 24803027
4782 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.6G254900.2

Sequence Viewer

Length: 1488 bp
ATGGCTTCCAAGTCAGTTTTAATCGTTGCTCTTCTGTTCTTTGTTCCCATTCTCTGCCTTCAAGGCACTTATGCTTACCGTATAGTACGTGATGCTCACCGTATAAGACGTGATGTCTCTGCTTCTGCCTCTGCCTCTGCCCCTGCTTCAGTTTTAATCGTTGCTCTTCTGTTCTGTGTTCCCATTCTCTGCCTTCAAAGCATTTATGCTTACCGTATAGGACGTGATGCCTCTGCTTCTGCCTCTGCCTCTGCCTCTGCCTCTGCCTCTGCCTCTGCCTCTTGCGCAATTGGTGGCTTCGGAAATGGAAATTGGGACAGCCATGGCGATGATGAAGAACGTACGGCTGCCCCAAGGAAGAAGAGATGCGAGTGGAAAAAATCACTTGGAGAAAAGTTTATGCTGGCAATCACACAGATTGGCTTGGGCAACGCTACCCCAAAGAGAATTATCGAGTTCATGAATGAGCCAGACTTAACAACAAAAAATGTGGCTAGTCATTTGCAGAAGTATCGTATATTCTTGAAGGGGAAGGAAGCTGCGGCGGGGGACGAAGACAAGCTTGAGAGGTTGAGCAGGTCAAGCTTCGCACGTGGCCACCCAGAACTACTCTTCAACAATAACGAACGAGACCAACCTCACTCACAGCTCCTGAACCAACCGCAAATGAAAACATCAATTGGCTCTACATTTCAAGTTCAACCATCAGCTGGAATTGGAAGCACCCCGCCTCTTACTGCTGTTGCTTCCAACAGCCACGGCTCCATCCACGCTCCACTTATTCGTTCGGGGCAGTCGAGCCTATTGAACAATAATCTAGCTAACTTTCCGCGCCAGCAACGAACGCTTGGTAATCGTAATGGGGATCAGCTGTTTATTCAAGAAAACCGCCCGGCAGCTTTTGAAATGCAACAACTGAGTAATAATTTTGAAAATGGAGGTATGTCTTTTGACCCAATGAATAATGTGGGACTTACCAACAATAATATTGGGAAAAATAATCTGATGCAAGTATACCCACTACAAAGCCAGCCAGGGACCAATAACCCATTCAGCTACAACCTTGCTACATCAGTAAATCAGAACGGTTCGAATTTAACTCCAATGTCTTCGAGCTTTCATAACTTGTGGTCTCATTTTAACGATGTAAATCAATGCGAAGTTGATTGGCAGTCGTTGTGTTCTGCTGGTTTTGAGACTGGTGCTAGTTCTGCATACCAGTTCCCTCCAAATTTGCCTGACAACAAAGGTGATCTTGATCCGCAACAAAATGTTCCAGTGTTGCCACCCCCAGAAGGGAATTTTAATGACCAATGTGGTCTGCTAAATATCAATGTTGGAGGAGGAAATGTTGAAAATTCCAATAGGTATCTTCATGATATCTACATGAAGCCCGATTCTCTTTTCACGGATGAGCAGGACAACTGTCAACCTCCTTCTCAGGTACATATGCACCAGAAATTTATGATTTTCTTTCATTCTTGCTAA
Functional Annotation
KEGG Pathways
Metabolic & Signaling
Pfam Domains
Protein Families

Protein Analysis

496

Amino Acids

54.17

Weight (kDa)

6.67

Isoelectric Point (pI)

41.61

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 286
Acc36I ACCTGC 1 cut(s) 567
AccB7I CCANNNNNTGG 1 cut(s) 710
AccI GTMKAC 1 cut(s) 1014
AccII CGCG 1 cut(s) 832
AciI CCGC 7 cut(s) 542, 545, 662, 728, 830, 889, 1262
AclWI GGATC 2 cut(s) 873, 1253
AcoI YGGCCR 1 cut(s) 595
AcsI RAATTY 5 cut(s) 1093, 1231, 1300, 1357, 1460
AcuI CTGAAG 1 cut(s) 132
AcvI CACGTG 1 cut(s) 593
AfaI GTAC 3 cut(s) 87, 343, 1446
AfiI CCNNNNNNNGG 3 cut(s) 710, 1295, 1296
AhdI GACNNNNNGTC 1 cut(s) 113
AjiI CACGTC 2 cut(s) 110, 224
AjnI CCWGG 1 cut(s) 1033
AjuI GAANNNNNNNTTGG 4 cut(s) 295, 327, 1034, 1066
Alw26I GTCTC 4 cut(s) 121, 624, 1137, 1190
AlwI GGATC 2 cut(s) 873, 1253
AlwNI CAGNNNCTG 1 cut(s) 652
AoxI GGCC 1 cut(s) 595
ApeKI GCWGC 3 cut(s) 347, 539, 896
ApoI RAATTY 5 cut(s) 1093, 1231, 1300, 1357, 1460
AspLEI GCGC 2 cut(s) 287, 834
AspS9I GGNCC 1 cut(s) 1038
AsuC2I CCSGG 1 cut(s) 893
AsuHPI GGTGA 2 cut(s) 89, 1262
AsuII TTCGAA 1 cut(s) 1091
AvaII GGWCC 1 cut(s) 1038
BalI TGGCCA 1 cut(s) 597
BbrPI CACGTG 1 cut(s) 593
BbsI GAAGAC 2 cut(s) 561, 1101
BbvI GCAGC 3 cut(s) 334, 526, 908
BccI CCATC 2 cut(s) 712, 773
BceAI ACGGC 2 cut(s) 360, 775
BcgI CGANNNNNNTGC 2 cut(s) 494, 528
BciT130I CCWGG 1 cut(s) 1035
BcnI CCSGG 1 cut(s) 893
BcoDI GTCTC 4 cut(s) 121, 624, 1137, 1190
BfaI CTAG 3 cut(s) 495, 818, 1206
BfuAI ACCTGC 1 cut(s) 567
BglI GCCNNNNNGGC 1 cut(s) 63
BisI GCNGC 4 cut(s) 348, 540, 543, 897
BlsI GCNGC 4 cut(s) 349, 541, 544, 898
Bme1390I CCNGG 2 cut(s) 893, 1035
Bme18I GGWCC 1 cut(s) 1038
BmeRI GACNNNNNGTC 1 cut(s) 113
BmgBI CACGTC 2 cut(s) 110, 224
BmgT120I GGNCC 1 cut(s) 1038
BmiI GGNNCC 2 cut(s) 763, 1039
BmrFI CCNGG 2 cut(s) 893, 1035
BmsI GCATC 4 cut(s) 82, 217, 356, 996
BoxI GACNNNNGTC 1 cut(s) 1425
BpiI GAAGAC 2 cut(s) 561, 1101
Bpu14I TTCGAA 1 cut(s) 1091
BpuEI CTTGAG 1 cut(s) 584
BpuMI CCSGG 1 cut(s) 893
BsaAI YACGTR 2 cut(s) 89, 593
BsaBI GATNNNNATC 2 cut(s) 1149, 1257
BsaI GGTCTC 2 cut(s) 624, 1137
BsaJI CCNNGG 4 cut(s) 322, 353, 757, 1034
BsaXI ACNNNNNCTCC 2 cut(s) 1335, 1365
Bsc4I CCNNNNNNNGG 3 cut(s) 710, 1295, 1296
Bse1I ACTGG 3 cut(s) 1204, 1219, 1277
Bse8I GATNNNNATC 2 cut(s) 1149, 1257
BseBI CCWGG 1 cut(s) 1035
BseDI CCNNGG 4 cut(s) 322, 353, 757, 1034
BseGI GGATG 2 cut(s) 765, 1417
BseJI GATNNNNATC 2 cut(s) 1149, 1257
BseLI CCNNNNNNNGG 3 cut(s) 710, 1295, 1296
BseMII CTCAG 2 cut(s) 908, 1454
BseNI ACTGG 3 cut(s) 1204, 1219, 1277
BseRI GAGGAG 1 cut(s) 1356
BseXI GCAGC 3 cut(s) 334, 526, 908
Bsh1236I CGCG 1 cut(s) 832
BshFI GGCC 1 cut(s) 597
BsiSI CCGG 1 cut(s) 893
BsiWI CGTACG 1 cut(s) 341
BslFI GGGAC 4 cut(s) 329, 563, 984, 1051
BslI CCNNNNNNNGG 3 cut(s) 710, 1295, 1296
BsmAI GTCTC 4 cut(s) 121, 624, 1137, 1190
BsmFI GGGAC 4 cut(s) 329, 563, 984, 1051
BsnI GGCC 1 cut(s) 597
Bso31I GGTCTC 2 cut(s) 624, 1137
Bsp119I TTCGAA 1 cut(s) 1091
Bsp143I GATC 3 cut(s) 865, 1252, 1258
Bsp19I CCATGG 1 cut(s) 322
BspACI CCGC 7 cut(s) 542, 545, 662, 728, 830, 889, 1262
BspANI GGCC 1 cut(s) 597
BspCNI CTCAG 2 cut(s) 909, 1453
BspFNI CGCG 1 cut(s) 832
BspHI TCATGA 2 cut(s) 459, 1375
BspLI GGNNCC 2 cut(s) 763, 1039
BspMI ACCTGC 1 cut(s) 567
BspPI GGATC 2 cut(s) 873, 1253
BspQI GCTCTTC 2 cut(s) 36, 171
BspT104I TTCGAA 1 cut(s) 1091
BspTNI GGTCTC 2 cut(s) 624, 1137
BsrI ACTGG 3 cut(s) 1204, 1219, 1277
BssECI CCNNGG 4 cut(s) 322, 353, 757, 1034
BssMI GATC 3 cut(s) 865, 1252, 1258
BssNAI GTATAC 1 cut(s) 1015
BssT1I CCWWGG 2 cut(s) 322, 353
Bst1107I GTATAC 1 cut(s) 1015
Bst2UI CCWGG 1 cut(s) 1035
Bst4CI ACNGT 5 cut(s) 80, 101, 215, 1088, 1427
Bst6I CTCTTC 4 cut(s) 36, 171, 356, 617
BstBAI YACGTR 2 cut(s) 89, 593
BstBI TTCGAA 1 cut(s) 1091
BstC8I GCNNGC 3 cut(s) 405, 836, 1031
BstDEI CTNAG 2 cut(s) 917, 1440
BstDSI CCRYGG 2 cut(s) 322, 757
BstF5I GGATG 2 cut(s) 765, 1417
BstFNI CGCG 1 cut(s) 832
BstHHI GCGC 2 cut(s) 287, 834
BstKTI GATC 3 cut(s) 868, 1255, 1261
BstMAI GTCTC 4 cut(s) 121, 624, 1137, 1190
BstMBI GATC 3 cut(s) 865, 1252, 1258
BstMWI GCNNNNNNNGC 6 cut(s) 63, 198, 284, 582, 844, 1211
BstNI CCWGG 1 cut(s) 1035
BstPAI GACNNNNGTC 1 cut(s) 1425
BstSCI CCNGG 2 cut(s) 891, 1033
BstUI CGCG 1 cut(s) 832
BstV1I GCAGC 3 cut(s) 334, 526, 908
BstV2I GAAGAC 2 cut(s) 561, 1101
BstZ17I GTATAC 1 cut(s) 1015
BsuRI GGCC 1 cut(s) 597
BtgI CCRYGG 2 cut(s) 322, 757
BtgZI GCGATG 1 cut(s) 342
BtrI CACGTC 2 cut(s) 110, 224
BtsCI GGATG 2 cut(s) 765, 1417
BtsIMutI CAGTG 1 cut(s) 1284
BveI ACCTGC 1 cut(s) 567
Cac8I GCNNGC 3 cut(s) 405, 836, 1031
CaiI CAGNNNCTG 1 cut(s) 652
CciI TCATGA 2 cut(s) 459, 1375
CfoI GCGC 2 cut(s) 287, 834
Cfr13I GGNCC 1 cut(s) 1038
Csp6I GTAC 3 cut(s) 86, 342, 1445
CspCI CAANNNNNGTGG 2 cut(s) 471, 506
CviAII CATG 4 cut(s) 323, 460, 1376, 1387
CviQI GTAC 3 cut(s) 86, 342, 1445
DdeI CTNAG 2 cut(s) 917, 1440
DpnI GATC 3 cut(s) 867, 1254, 1260
DpnII GATC 3 cut(s) 865, 1252, 1258
DriI GACNNNNNGTC 1 cut(s) 113
EaeI YGGCCR 1 cut(s) 595
Eam1104I CTCTTC 4 cut(s) 36, 171, 356, 617
Eam1105I GACNNNNNGTC 1 cut(s) 113
EarI CTCTTC 4 cut(s) 36, 171, 356, 617
Eco130I CCWWGG 2 cut(s) 322, 353
Eco31I GGTCTC 2 cut(s) 624, 1137
Eco32I GATATC 1 cut(s) 1381
Eco47I GGWCC 1 cut(s) 1038
Eco57I CTGAAG 1 cut(s) 132
Eco72I CACGTG 1 cut(s) 593
EcoRII CCWGG 1 cut(s) 1033
EcoRV GATATC 1 cut(s) 1381
EcoT14I CCWWGG 2 cut(s) 322, 353
ErhI CCWWGG 2 cut(s) 322, 353
FaeI CATG 4 cut(s) 326, 463, 1379, 1390
FalI AAGNNNNNCTT 4 cut(s) 546, 578, 1239, 1271
FaqI GGGAC 4 cut(s) 329, 563, 984, 1051
FatI CATG 4 cut(s) 322, 459, 1375, 1386
FauI CCCGC 2 cut(s) 538, 735
FauNDI CATATG 1 cut(s) 1449
FblI GTMKAC 1 cut(s) 1014
Fnu4HI GCNGC 4 cut(s) 348, 540, 543, 897
FokI GGATG 2 cut(s) 752, 1424
Fsp4HI GCNGC 4 cut(s) 348, 540, 543, 897
FspBI CTAG 3 cut(s) 495, 818, 1206
FspI TGCGCA 1 cut(s) 286
GlaI GCGC 2 cut(s) 286, 833
GluI GCNGC 4 cut(s) 348, 540, 543, 897
HaeIII GGCC 1 cut(s) 597
HapII CCGG 1 cut(s) 893
HhaI GCGC 2 cut(s) 287, 834
Hin1II CATG 4 cut(s) 326, 463, 1379, 1390
Hin6I GCGC 2 cut(s) 285, 832
HinP1I GCGC 2 cut(s) 285, 832
HincII GTYRAC 1 cut(s) 1430
HindII GTYRAC 1 cut(s) 1430
HindIII AAGCTT 2 cut(s) 560, 583
HinfI GANTC 1 cut(s) 1397
HpaII CCGG 1 cut(s) 893
HphI GGTGA 2 cut(s) 89, 1262
Hpy166II GTNNAC 2 cut(s) 1015, 1430
Hpy188I TCNGA 3 cut(s) 302, 1005, 1083
Hpy188III TCNNGA 6 cut(s) 460, 523, 652, 881, 1256, 1376
Hpy8I GTNNAC 2 cut(s) 1015, 1430
HpyAV CCTTC 6 cut(s) 68, 203, 520, 526, 1289, 1446
HpyCH4III ACNGT 5 cut(s) 80, 101, 215, 1088, 1427
HpyCH4IV ACGT 5 cut(s) 88, 109, 223, 340, 592
HpyCH4V TGCA 5 cut(s) 505, 910, 1009, 1214, 1453
HpyF10VI GCNNNNNNNGC 6 cut(s) 63, 198, 284, 582, 844, 1211
HpyF3I CTNAG 2 cut(s) 917, 1440
HpySE526I ACGT 5 cut(s) 88, 109, 223, 340, 592
Hsp92II CATG 4 cut(s) 326, 463, 1379, 1390
HspAI GCGC 2 cut(s) 285, 832
Kzo9I GATC 3 cut(s) 865, 1252, 1258
LguI GCTCTTC 2 cut(s) 36, 171
LmnI GCTCC 3 cut(s) 654, 767, 778
Lsp1109I GCAGC 3 cut(s) 334, 526, 908
LweI GCATC 4 cut(s) 82, 217, 356, 996
MaeI CTAG 3 cut(s) 495, 818, 1206
MaeII ACGT 5 cut(s) 88, 109, 223, 340, 592
MalI GATC 3 cut(s) 867, 1254, 1260
MboI GATC 3 cut(s) 865, 1252, 1258
MboII GAAGA 9 cut(s) 23, 158, 347, 370, 373, 566, 604, 1101, 1364
MfeI CAATTG 2 cut(s) 288, 678
MlsI TGGCCA 1 cut(s) 597
MluNI TGGCCA 1 cut(s) 597
MmeI TCCRAC 2 cut(s) 774, 1318
Mox20I TGGCCA 1 cut(s) 597
MscI TGGCCA 1 cut(s) 597
MseI TTAA 6 cut(s) 20, 155, 476, 1097, 1140, 1305
MslI CAYNNNNRTG 1 cut(s) 327
Msp20I TGGCCA 1 cut(s) 597
MspA1I CMGCKG 2 cut(s) 710, 871
MspI CCGG 1 cut(s) 893
MspR9I CCNGG 2 cut(s) 893, 1035
MunI CAATTG 2 cut(s) 288, 678
MvaI CCWGG 1 cut(s) 1035
MvnI CGCG 1 cut(s) 832
MwoI GCNNNNNNNGC 6 cut(s) 63, 198, 284, 582, 844, 1211
NciI CCSGG 1 cut(s) 893
NcoI CCATGG 1 cut(s) 322
NdeI CATATG 1 cut(s) 1449
NdeII GATC 3 cut(s) 865, 1252, 1258
NlaIII CATG 4 cut(s) 326, 463, 1379, 1390
NlaIV GGNNCC 2 cut(s) 763, 1039
NsbI TGCGCA 1 cut(s) 286
NspV TTCGAA 1 cut(s) 1091
PagI TCATGA 2 cut(s) 459, 1375
PciSI GCTCTTC 2 cut(s) 36, 171
PcsI WCGNNNNNNNCGW 1 cut(s) 794
PfeI GAWTC 1 cut(s) 1397
Pfl23II CGTACG 1 cut(s) 341
PflMI CCANNNNNTGG 1 cut(s) 710
PkrI GCNGC 4 cut(s) 349, 541, 544, 898
PmaCI CACGTG 1 cut(s) 593
PmlI CACGTG 1 cut(s) 593
Ppu21I YACGTR 2 cut(s) 89, 593
PshAI GACNNNNGTC 1 cut(s) 1425
Psp6I CCWGG 1 cut(s) 1033
PspCI CACGTG 1 cut(s) 593
PspGI CCWGG 1 cut(s) 1033
PspLI CGTACG 1 cut(s) 341
PspN4I GGNNCC 2 cut(s) 763, 1039
PspPI GGNCC 1 cut(s) 1038
PstNI CAGNNNCTG 1 cut(s) 652
PvuII CAGCTG 2 cut(s) 710, 871
RsaI GTAC 3 cut(s) 87, 343, 1446
RsaNI GTAC 3 cut(s) 86, 342, 1445
RseI CAYNNNNRTG 1 cut(s) 327
SapI GCTCTTC 2 cut(s) 36, 171
SaqAI TTAA 6 cut(s) 20, 155, 476, 1097, 1140, 1305
SatI GCNGC 4 cut(s) 348, 540, 543, 897
Sau3AI GATC 3 cut(s) 865, 1252, 1258
Sau96I GGNCC 1 cut(s) 1038
ScrFI CCNGG 2 cut(s) 893, 1035
SfaNI GCATC 4 cut(s) 82, 217, 356, 996
SfuI TTCGAA 1 cut(s) 1091
SinI GGWCC 1 cut(s) 1038
SmiMI CAYNNNNRTG 1 cut(s) 327
SmlI CTYRAG 1 cut(s) 563
SmoI CTYRAG 1 cut(s) 563
SsiI CCGC 7 cut(s) 542, 545, 662, 728, 830, 889, 1262
SspI AATATT 1 cut(s) 988
SspMI CTAG 3 cut(s) 495, 818, 1206
StyD4I CCNGG 2 cut(s) 891, 1033
StyI CCWWGG 2 cut(s) 322, 353
TaaI ACNGT 5 cut(s) 80, 101, 215, 1088, 1427
TaiI ACGT 5 cut(s) 91, 112, 226, 343, 595
TaqI TCGA 4 cut(s) 453, 797, 1091, 1112
TauI GCSGC 1 cut(s) 545
TfiI GAWTC 1 cut(s) 1397
Tru1I TTAA 6 cut(s) 20, 155, 476, 1097, 1140, 1305
Tru9I TTAA 6 cut(s) 20, 155, 476, 1097, 1140, 1305
TscAI CASTG 1 cut(s) 1284
TseI GCWGC 3 cut(s) 347, 539, 896
TspDTI ATGAA 9 cut(s) 348, 448, 476, 683, 974, 1109, 1364, 1403, 1466
TspGWI ACGGA 1 cut(s) 1424
TspRI CASTG 1 cut(s) 1284
Van91I CCANNNNNTGG 1 cut(s) 710
VpaK11BI GGWCC 1 cut(s) 1038
XapI RAATTY 5 cut(s) 1093, 1231, 1300, 1357, 1460
XmiI GTMKAC 1 cut(s) 1014
XspI CTAG 3 cut(s) 495, 818, 1206
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.