Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp03

Orthogroup ID

OG0003213

Physical Location & Seq

Genomic Coordinates Reverse (-)

21602974 .. 21608249

Gene Structure 5276 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.3G211000.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1122 bp

ATGGGCTTTGTTTGTGTTTTGGGCCATAATTTGGCTCAATATAATAGGCCTCGTAATTCGGGCCTTAAGAACGGGTCTTACAGCTCGGTCCACTCGGCCGGCCAGAGCTCACCTTGCAAAGGTTTGAATTTTTTCAGCGCATTGCCGTCTCTGAAAGCAAGAAGAAGAAAGTGGTGGTTGGAAGGGCAGAGCAATTGCTGGTGTAGCTTGAAGTGCGTGGTTGGGTGTGTGGGAATGTCGATGGGGAGTGACAGCACTTGGGTTGGGAAGAAGCCTCTGAGACGCATCGGAGGCATGTCCGATGCTCTATCCATTGCTTCGGATCTTGGCTTTTCTGTTGCCGCTCCTCCTACCCAGGAAGAGCTTCAGAACCTATCCACTACTACTGGTGAGAAGGGTGATGACTTGATAAAGGTTCTGAGGGAACTTACCTCTGTACAAAGAAAAATAGCAGATCTGCAAGTTGAACTTCAAGGGAGAAAAGATGATAAAAACGTAGCACATTTGACACATGCGAGTGAAATGGAAAAGAAGTGTGAAACTTTAGCGAGGATTACAACCATATTGAAAGATGTGATTCAGAATAAGGATCGCATCATAGCCCGTCTTCAACAACCATATTCACTCGATTGCATTCCAGTGGAAGCAGAATATCAGAAACAATTCTCTGAATTACTGATGAAGGCTGCTAGTGATTATGGGGCCTTGACAGCATCAGTTGCAGATTTCCAGTGGAGTCAGACATTTAAGGAACCTCCTTCAGTTTGGGGGGAAATGCTTCGCCCAATTCCTGTTGCCTTAGCATCATGCACTCGGTTCTTTGAAGCAATGTCTGCTATGAGGGAATCATTTTCAACACTTCAGCATCTCAGAGTCGGTCATAGTGACGCATCTTCACCGATAACACCAGGCAAGGATTCCTCCCGAAGAGTACCAGGGGATTCCGAATGTGTAACTCCACCGCCTTGGAGAACTGAACCAAGCTTTGATGACTTAGCTATCAGAAGCTCAAGGAGGCCAGAAGTCGAGCACCGAGAAGCAGACGATGAAAACAGTGAGGGGGATGGAACTAGCCACAGGAGATTATCATGGCCTCCTTCAGTTAAAAAGAGTGGTGTTTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000226 GO:0000278 GO:0000281 GO:0000910 GO:0000911 GO:0006996 GO:0007010 GO:0007017 GO:0007020 GO:0007049 GO:0008150 GO:0009987 GO:0016043 GO:0022402 GO:0022607 GO:0031109 GO:0032506 GO:0034622 GO:0043933 GO:0044085 GO:0046785 GO:0051258 GO:0051301 GO:0061640 GO:0065003 GO:0071840 GO:0097435 GO:1902410 GO:1903047

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

HAUS2

Protein Analysis

374

Amino Acids

41.23

Weight (kDa)

8.47

Isoelectric Point (pI)

52.53

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0003213)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G32980
fragaria_vesca	FvH4_6g42360
malus_domestica	MD09G1113600.v1.1 MD17G1103700.v1.1
prunus_persica	Prupe.3G211000_v2.0.a1 Prupe.3G211000_v2.0.a1
pyrus_communis	pycom09g03770 pycom17g09780
rosa_chinensis	RchiOBHm_Chr1g0329411 RchiOBHm_Chr1g0361251 RchiOBHm_Chr2g0158231 RchiOBHm_Chr2g0158271
rosa_laevigata	RLG00000021067 RLG00000021072 RLG00000029885 RLG00000029893
rosa_multiflora	Rmu_sc0003151.1_g000015 Rmu_sc0005982.1_g000004 Rmu_sc0007763.1_g000001 Rmu_sc0008904.1_g000002
rosa_roxburghii	Rroxscaffold_2G00091550 Rroxscaffold_2G00091600
rosa_rugosa	Rorug01G0079600 Rorug01G0079700 Rorug01G0079700 Rorug02G0466400 Rorug02G0466500
rosa_samantha	Rh1BG078100 Rh1CG094800 Rh2BG546600 Rh2CG516500 Rh2CG516800 Rh3BG302100 Rh5BG556200
rosa_wichuraiana	Rw2G044040 Rw2G044090 Rw2G044110

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB7I	CCANNNNNTGG	1 cut(s)	31
AccBSI	CCGCTC	1 cut(s)	344
AciI	CCGC	2 cut(s)	342, 962
AclWI	GGATC	2 cut(s)	330, 597
AcoI	YGGCCR	2 cut(s)	96, 100
AcsI	RAATTY	1 cut(s)	127
AcuI	CTGAAG	4 cut(s)	350, 744, 845, 1083
AfaI	GTAC	2 cut(s)	438, 933
AfiI	CCNNNNNNNGG	2 cut(s)	31, 119
AflII	CTTAAG	1 cut(s)	65
AgsI	TTSAA	8 cut(s)	127, 211, 467, 473, 568, 611, 824, 855
AjnI	CCWGG	3 cut(s)	354, 907, 934
AluBI	AGCT	7 cut(s)	84, 108, 207, 364, 984, 998, 1008
AluI	AGCT	7 cut(s)	84, 108, 207, 364, 984, 998, 1008
Alw21I	GWGCWC	2 cut(s)	110, 1032
Alw26I	GTCTC	2 cut(s)	153, 274
AlwI	GGATC	2 cut(s)	330, 597
AoxI	GGCC	8 cut(s)	22, 47, 61, 96, 100, 702, 1016, 1091
ApeKI	GCWGC	1 cut(s)	686
ApoI	RAATTY	1 cut(s)	127
Asp700I	GAANNNNTTC	4 cut(s)	131, 363, 662, 777
AspLEI	GCGC	1 cut(s)	140
AspS9I	GGNCC	4 cut(s)	22, 61, 88, 702
AsuHPI	GGTGA	4 cut(s)	102, 401, 410, 888
AvaII	GGWCC	1 cut(s)	88
BanII	GRGCYC	1 cut(s)	110
BbsI	GAAGAC	1 cut(s)	599
Bbv12I	GWGCWC	2 cut(s)	110, 1032
BbvI	GCAGC	1 cut(s)	673
BccI	CCATC	2 cut(s)	235, 1058
BceAI	ACGGC	1 cut(s)	130
BciT130I	CCWGG	3 cut(s)	356, 909, 936
BcoDI	GTCTC	2 cut(s)	153, 274
BfaI	CTAG	2 cut(s)	690, 1071
BfrI	CTTAAG	1 cut(s)	65
BglII	AGATCT	1 cut(s)	454
BisI	GCNGC	2 cut(s)	342, 687
BlsI	GCNGC	2 cut(s)	343, 688
Bme1390I	CCNGG	3 cut(s)	356, 909, 936
Bme18I	GGWCC	1 cut(s)	88
BmgT120I	GGNCC	4 cut(s)	22, 61, 88, 702
BmiI	GGNNCC	2 cut(s)	703, 753
BmrFI	CCNGG	3 cut(s)	356, 909, 936
BmsI	GCATC	7 cut(s)	292, 294, 603, 722, 812, 874, 899
BpiI	GAAGAC	1 cut(s)	599
Bpu10I	CCTNAGC	1 cut(s)	799
BpuEI	CTTGAG	1 cut(s)	994
BsaJI	CCNNGG	3 cut(s)	354, 935, 965
Bsc4I	CCNNNNNNNGG	2 cut(s)	31, 119
Bse118I	RCCGGY	1 cut(s)	98
Bse1I	ACTGG	3 cut(s)	391, 638, 730
Bse3DI	GCAATG	3 cut(s)	140, 312, 834
BseBI	CCWGG	3 cut(s)	356, 909, 936
BseDI	CCNNGG	3 cut(s)	354, 935, 965
BseGI	GGATG	1 cut(s)	1069
BseLI	CCNNNNNNNGG	2 cut(s)	31, 119
BseMI	GCAATG	3 cut(s)	140, 312, 834
BseMII	CTCAG	3 cut(s)	269, 410, 883
BseNI	ACTGG	3 cut(s)	391, 638, 730
BseRI	GAGGAG	1 cut(s)	336
BseX3I	CGGCCG	1 cut(s)	96
BseXI	GCAGC	1 cut(s)	673
Bsh1285I	CGRYCG	1 cut(s)	99
BshFI	GGCC	8 cut(s)	24, 49, 63, 98, 102, 704, 1018, 1093
BsiEI	CGRYCG	1 cut(s)	99
BsiHKAI	GWGCWC	2 cut(s)	110, 1032
BsiSI	CCGG	1 cut(s)	99
BslI	CCNNNNNNNGG	2 cut(s)	31, 119
BsmAI	GTCTC	2 cut(s)	153, 274
BsmBI	CGTCTC	2 cut(s)	153, 274
BsmI	GAATGC	1 cut(s)	633
BsnI	GGCC	8 cut(s)	24, 49, 63, 98, 102, 704, 1018, 1093
Bsp1286I	GDGCHC	2 cut(s)	110, 1032
Bsp1407I	TGTACA	1 cut(s)	436
Bsp143I	GATC	3 cut(s)	322, 454, 589
BspACI	CCGC	2 cut(s)	342, 962
BspANI	GGCC	8 cut(s)	24, 49, 63, 98, 102, 704, 1018, 1093
BspCNI	CTCAG	3 cut(s)	270, 411, 882
BspLI	GGNNCC	2 cut(s)	703, 753
BspPI	GGATC	2 cut(s)	330, 597
BspQI	GCTCTTC	1 cut(s)	354
BspTI	CTTAAG	1 cut(s)	65
BsrBI	CCGCTC	1 cut(s)	344
BsrDI	GCAATG	3 cut(s)	140, 312, 834
BsrFI	RCCGGY	1 cut(s)	98
BsrGI	TGTACA	1 cut(s)	436
BsrI	ACTGG	3 cut(s)	391, 638, 730
BssAI	RCCGGY	1 cut(s)	98
BssECI	CCNNGG	3 cut(s)	354, 935, 965
BssMI	GATC	3 cut(s)	322, 454, 589
BssT1I	CCWWGG	1 cut(s)	965
Bst2UI	CCWGG	3 cut(s)	356, 909, 936
Bst4CI	ACNGT	1 cut(s)	1055
Bst6I	CTCTTC	2 cut(s)	354, 922
BstAFI	CTTAAG	1 cut(s)	65
BstAPI	GCANNNNNTGC	2 cut(s)	719, 833
BstAUI	TGTACA	1 cut(s)	436
BstC8I	GCNNGC	1 cut(s)	100
BstDEI	CTNAG	5 cut(s)	278, 419, 799, 869, 994
BstENI	CCTNNNNNAGG	1 cut(s)	117
BstF5I	GGATG	1 cut(s)	1069
BstHHI	GCGC	1 cut(s)	140
BstKTI	GATC	3 cut(s)	325, 457, 592
BstMAI	GTCTC	2 cut(s)	153, 274
BstMBI	GATC	3 cut(s)	322, 454, 589
BstMCI	CGRYCG	1 cut(s)	99
BstMWI	GCNNNNNNNGC	7 cut(s)	114, 204, 213, 291, 710, 719, 833
BstNI	CCWGG	3 cut(s)	356, 909, 936
BstNSI	RCATGY	2 cut(s)	298, 515
BstSCI	CCNGG	3 cut(s)	354, 907, 934
BstV1I	GCAGC	1 cut(s)	673
BstV2I	GAAGAC	1 cut(s)	599
BstX2I	RGATCY	2 cut(s)	322, 454
BstXI	CCANNNNNNTGG	1 cut(s)	966
BstYI	RGATCY	2 cut(s)	322, 454
BstZI	CGGCCG	1 cut(s)	96
BsuRI	GGCC	8 cut(s)	24, 49, 63, 98, 102, 704, 1018, 1093
BtsCI	GGATG	1 cut(s)	1069
BtsIMutI	CAGTG	3 cut(s)	645, 737, 1060
Cac8I	GCNNGC	1 cut(s)	100
CfoI	GCGC	1 cut(s)	140
Cfr10I	RCCGGY	1 cut(s)	98
Cfr13I	GGNCC	4 cut(s)	22, 61, 88, 702
CseI	GACGC	2 cut(s)	291, 896
Csp6I	GTAC	2 cut(s)	437, 932
CviAII	CATG	4 cut(s)	295, 512, 807, 1089
CviQI	GTAC	2 cut(s)	437, 932
DdeI	CTNAG	5 cut(s)	278, 419, 799, 869, 994
DpnI	GATC	3 cut(s)	324, 456, 591
DpnII	GATC	3 cut(s)	322, 454, 589
EaeI	YGGCCR	2 cut(s)	96, 100
EagI	CGGCCG	1 cut(s)	96
Eam1104I	CTCTTC	2 cut(s)	354, 922
EarI	CTCTTC	2 cut(s)	354, 922
Ecl136II	GAGCTC	1 cut(s)	108
EclXI	CGGCCG	1 cut(s)	96
Eco130I	CCWWGG	1 cut(s)	965
Eco147I	AGGCCT	1 cut(s)	49
Eco24I	GRGCYC	1 cut(s)	110
Eco47I	GGWCC	1 cut(s)	88
Eco52I	CGGCCG	1 cut(s)	96
Eco53kI	GAGCTC	1 cut(s)	108
Eco57I	CTGAAG	4 cut(s)	350, 744, 845, 1083
EcoICRI	GAGCTC	1 cut(s)	108
EcoNI	CCTNNNNNAGG	1 cut(s)	117
EcoO109I	RGGNCCY	1 cut(s)	702
EcoRII	CCWGG	3 cut(s)	354, 907, 934
EcoT14I	CCWWGG	1 cut(s)	965
EcoT38I	GRGCYC	1 cut(s)	110
ErhI	CCWWGG	1 cut(s)	965
Esp3I	CGTCTC	2 cut(s)	153, 274
FaeI	CATG	4 cut(s)	298, 515, 810, 1092
FalI	AAGNNNNNCTT	2 cut(s)	453, 485
FatI	CATG	4 cut(s)	294, 511, 806, 1088
Fnu4HI	GCNGC	2 cut(s)	342, 687
FokI	GGATG	1 cut(s)	1076
FriOI	GRGCYC	1 cut(s)	110
FseI	GGCCGGCC	1 cut(s)	102
Fsp4HI	GCNGC	2 cut(s)	342, 687
FspBI	CTAG	2 cut(s)	690, 1071
GlaI	GCGC	1 cut(s)	139
GluI	GCNGC	2 cut(s)	342, 687
HaeIII	GGCC	8 cut(s)	24, 49, 63, 98, 102, 704, 1018, 1093
HapII	CCGG	1 cut(s)	99
HgaI	GACGC	2 cut(s)	291, 896
HhaI	GCGC	1 cut(s)	140
Hin1II	CATG	4 cut(s)	298, 515, 810, 1092
Hin6I	GCGC	1 cut(s)	138
HinP1I	GCGC	1 cut(s)	138
HindIII	AAGCTT	1 cut(s)	982
HinfI	GANTC	6 cut(s)	577, 736, 845, 873, 917, 941
HpaII	CCGG	1 cut(s)	99
HphI	GGTGA	4 cut(s)	102, 401, 410, 888
Hpy166II	GTNNAC	1 cut(s)	91
Hpy188III	TCNNGA	1 cut(s)	924
Hpy8I	GTNNAC	1 cut(s)	91
HpyAV	CCTTC	5 cut(s)	176, 388, 676, 768, 1107
HpyCH4III	ACNGT	1 cut(s)	1055
HpyCH4IV	ACGT	1 cut(s)	495
HpyCH4V	TGCA	5 cut(s)	117, 460, 633, 722, 810
HpyF10VI	GCNNNNNNNGC	7 cut(s)	114, 204, 213, 291, 710, 719, 833
HpyF3I	CTNAG	5 cut(s)	278, 419, 799, 869, 994
HpySE526I	ACGT	1 cut(s)	495
Hsp92II	CATG	4 cut(s)	298, 515, 810, 1092
HspAI	GCGC	1 cut(s)	138
KroI	GCCGGC	1 cut(s)	98
KroNI	GCCGGC	1 cut(s)	100
Kzo9I	GATC	3 cut(s)	322, 454, 589
LguI	GCTCTTC	1 cut(s)	354
LmnI	GCTCC	1 cut(s)	349
Lsp1109I	GCAGC	1 cut(s)	673
LweI	GCATC	7 cut(s)	292, 294, 603, 722, 812, 874, 899
MaeI	CTAG	2 cut(s)	690, 1071
MaeII	ACGT	1 cut(s)	495
MaeIII	GTNAC	3 cut(s)	248, 884, 952
MalI	GATC	3 cut(s)	324, 456, 591
MbiI	CCGCTC	1 cut(s)	344
MboI	GATC	3 cut(s)	322, 454, 589
MboII	GAAGA	7 cut(s)	174, 177, 280, 371, 599, 885, 939
MfeI	CAATTG	1 cut(s)	193
MflI	RGATCY	2 cut(s)	322, 454
MhlI	GDGCHC	2 cut(s)	110, 1032
MluCI	AATT	7 cut(s)	28, 55, 127, 193, 662, 671, 786
MlyI	GAGTC	2 cut(s)	745, 882
MmeI	TCCRAC	1 cut(s)	159
MroNI	GCCGGC	1 cut(s)	98
MroXI	GAANNNNTTC	4 cut(s)	131, 363, 662, 777
MseI	TTAA	3 cut(s)	66, 747, 1104
MslI	CAYNNNNRTG	2 cut(s)	516, 638
MspCI	CTTAAG	1 cut(s)	65
MspI	CCGG	1 cut(s)	99
MspR9I	CCNGG	3 cut(s)	356, 909, 936
MunI	CAATTG	1 cut(s)	193
Mva1269I	GAATGC	1 cut(s)	633
MvaI	CCWGG	3 cut(s)	356, 909, 936
MwoI	GCNNNNNNNGC	7 cut(s)	114, 204, 213, 291, 710, 719, 833
NaeI	GCCGGC	1 cut(s)	100
NdeII	GATC	3 cut(s)	322, 454, 589
NgoMIV	GCCGGC	1 cut(s)	98
NlaIII	CATG	4 cut(s)	298, 515, 810, 1092
NlaIV	GGNNCC	2 cut(s)	703, 753
NmeAIII	GCCGAG	1 cut(s)	74
NmuCI	GTSAC	2 cut(s)	248, 884
NspI	RCATGY	2 cut(s)	298, 515
PceI	AGGCCT	1 cut(s)	49
PciSI	GCTCTTC	1 cut(s)	354
PctI	GAATGC	1 cut(s)	633
PdiI	GCCGGC	1 cut(s)	100
PdmI	GAANNNNTTC	4 cut(s)	131, 363, 662, 777
PfeI	GAWTC	4 cut(s)	577, 845, 917, 941
PflMI	CCANNNNNTGG	1 cut(s)	31
PkrI	GCNGC	2 cut(s)	343, 688
PleI	GAGTC	2 cut(s)	744, 881
PpsI	GAGTC	2 cut(s)	744, 881
Psp124BI	GAGCTC	1 cut(s)	110
Psp6I	CCWGG	3 cut(s)	354, 907, 934
PspGI	CCWGG	3 cut(s)	354, 907, 934
PspN4I	GGNNCC	2 cut(s)	703, 753
PspPI	GGNCC	4 cut(s)	22, 61, 88, 702
PsrI	GAACNNNNNNTAC	2 cut(s)	62, 94
PsuI	RGATCY	2 cut(s)	322, 454
RigI	GGCCGGCC	1 cut(s)	102
RsaI	GTAC	2 cut(s)	438, 933
RsaNI	GTAC	2 cut(s)	437, 932
RseI	CAYNNNNRTG	2 cut(s)	516, 638
SacI	GAGCTC	1 cut(s)	110
SapI	GCTCTTC	1 cut(s)	354
SaqAI	TTAA	3 cut(s)	66, 747, 1104
SatI	GCNGC	2 cut(s)	342, 687
Sau3AI	GATC	3 cut(s)	322, 454, 589
Sau96I	GGNCC	4 cut(s)	22, 61, 88, 702
SchI	GAGTC	2 cut(s)	745, 882
ScrFI	CCNGG	3 cut(s)	356, 909, 936
SduI	GDGCHC	2 cut(s)	110, 1032
SfaNI	GCATC	7 cut(s)	292, 294, 603, 722, 812, 874, 899
SinI	GGWCC	1 cut(s)	88
SmiMI	CAYNNNNRTG	2 cut(s)	516, 638
SmlI	CTYRAG	2 cut(s)	65, 1009
SmoI	CTYRAG	2 cut(s)	65, 1009
Sse9I	AATT	7 cut(s)	28, 55, 127, 193, 662, 671, 786
SseBI	AGGCCT	1 cut(s)	49
SsiI	CCGC	2 cut(s)	342, 962
SspMI	CTAG	2 cut(s)	690, 1071
SstI	GAGCTC	1 cut(s)	110
StuI	AGGCCT	1 cut(s)	49
StyD4I	CCNGG	3 cut(s)	354, 907, 934
StyI	CCWWGG	1 cut(s)	965
TaaI	ACNGT	1 cut(s)	1055
TaiI	ACGT	1 cut(s)	498
TaqI	TCGA	3 cut(s)	239, 627, 1026
TaqII	GACCGA	2 cut(s)	76, 866
TasI	AATT	7 cut(s)	28, 55, 127, 193, 662, 671, 786
TatI	WGTACW	1 cut(s)	436
TauI	GCSGC	1 cut(s)	344
TfiI	GAWTC	4 cut(s)	577, 845, 917, 941
Tru1I	TTAA	3 cut(s)	66, 747, 1104
Tru9I	TTAA	3 cut(s)	66, 747, 1104
TscAI	CASTG	3 cut(s)	645, 737, 1060
TseFI	GTSAC	2 cut(s)	248, 884
TseI	GCWGC	1 cut(s)	686
Tsp45I	GTSAC	2 cut(s)	248, 884
TspDTI	ATGAA	2 cut(s)	695, 1062
TspRI	CASTG	3 cut(s)	645, 737, 1060
Van91I	CCANNNNNTGG	1 cut(s)	31
Vha464I	CTTAAG	1 cut(s)	65
VpaK11BI	GGWCC	1 cut(s)	88
XagI	CCTNNNNNAGG	1 cut(s)	117
XapI	RAATTY	1 cut(s)	127
XceI	RCATGY	2 cut(s)	298, 515
XmnI	GAANNNNTTC	4 cut(s)	131, 363, 662, 777
XspI	CTAG	2 cut(s)	690, 1071

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.