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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G29075 |
| fragaria_vesca | FvH4_2g10581 FvH4_4g17390 FvH4_6g48020 FvH4_6g48030 FvH4_6g48030 FvH4_6g48030 |
| malus_domestica | MD09G1054700.v1.1 MD09G1054800.v1.1 MD17G1052800.v1.1 MD17G1052900.v1.1 |
| prunus_persica | Prupe.3G263700_v2.0.a1 Prupe.3G263800_v2.0.a1 |
| pyrus_communis | pycom111g04600 pycom17g05080 |
| rosa_chinensis | RchiOBHm_Chr2g0167311 RchiOBHm_Chr2g0167321 |
| rosa_laevigata | RLG00000021706 RLG00000021708 RLG00000021731 RLG00000024056 RLG00000035185 |
| rosa_multiflora | Rmu_sc0001840.1_g000012 Rmu_sc0001840.1_g000017 Rmu_sc0014204.1_g000003 Rmu_sc0014204.1_g000007 |
| rosa_roxburghii | Rroxscaffold_2G00083600 Rroxscaffold_2G00083620 Rroxscaffold_7G00180460 |
| rosa_rugosa | Rorug02G0529400 Rorug02G0529500 Rorug05G0310100 |
| rosa_samantha | Rh2AG596400 Rh2AG596500 Rh2BG607800 Rh2BG607900 Rh2CG578500 Rh2CG578700 Rh2DG619200 Rh2DG619300 Rh5BG389900 Rh5BG486900 Rh5CG511300 Rh6AG351500 |
| rosa_wichuraiana | Rw2G049640 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AatII | GACGTC | 1 cut(s) | 1318 |
| Acc36I | ACCTGC | 1 cut(s) | 137 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 839 |
| AccBSI | CCGCTC | 1 cut(s) | 172 |
| AccII | CGCG | 3 cut(s) | 946, 1124, 1197 |
| AcoI | YGGCCR | 3 cut(s) | 100, 520, 571 |
| AcyI | GRCGYC | 5 cut(s) | 62, 542, 593, 644, 1315 |
| AjnI | CCWGG | 7 cut(s) | 289, 352, 802, 925, 1003, 1051, 1177 |
| AluBI | AGCT | 9 cut(s) | 17, 243, 755, 837, 993, 1041, 1089, 1214, 1344 |
| AluI | AGCT | 9 cut(s) | 17, 243, 755, 837, 993, 1041, 1089, 1214, 1344 |
| Alw21I | GWGCWC | 2 cut(s) | 109, 318 |
| Alw26I | GTCTC | 8 cut(s) | 119, 469, 533, 584, 635, 851, 916, 1042 |
| Ama87I | CYCGRG | 9 cut(s) | 110, 305, 371, 551, 581, 602, 632, 653, 683 |
| ApeKI | GCWGC | 1 cut(s) | 240 |
| AspLEI | GCGC | 2 cut(s) | 1124, 1197 |
| AsuC2I | CCSGG | 5 cut(s) | 250, 267, 429, 444, 750 |
| AsuHPI | GGTGA | 2 cut(s) | 1211, 1310 |
| AsuII | TTCGAA | 1 cut(s) | 741 |
| AvaI | CYCGRG | 9 cut(s) | 110, 305, 371, 551, 581, 602, 632, 653, 683 |
| AvaII | GGWCC | 2 cut(s) | 269, 879 |
| BamHI | GGATCC | 1 cut(s) | 380 |
| BanII | GRGCYC | 2 cut(s) | 201, 495 |
| BauI | CACGAG | 1 cut(s) | 1236 |
| BbsI | GAAGAC | 1 cut(s) | 914 |
| Bbv12I | GWGCWC | 2 cut(s) | 109, 318 |
| BbvI | GCAGC | 1 cut(s) | 252 |
| BceAI | ACGGC | 4 cut(s) | 49, 87, 100, 115 |
| BciT130I | CCWGG | 7 cut(s) | 291, 354, 804, 927, 1005, 1053, 1179 |
| BciVI | GTATCC | 1 cut(s) | 71 |
| BcnI | CCSGG | 5 cut(s) | 250, 267, 429, 444, 750 |
| BcoDI | GTCTC | 8 cut(s) | 119, 469, 533, 584, 635, 851, 916, 1042 |
| BfaI | CTAG | 1 cut(s) | 957 |
| BfmI | CTRYAG | 1 cut(s) | 1249 |
| BfuAI | ACCTGC | 1 cut(s) | 137 |
| BfuI | GTATCC | 1 cut(s) | 71 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 1033 |
| BisI | GCNGC | 8 cut(s) | 173, 241, 821, 944, 1022, 1025, 1028, 1070 |
| BlpI | GCTNAGC | 1 cut(s) | 1215 |
| BlsI | GCNGC | 8 cut(s) | 174, 242, 822, 945, 1023, 1026, 1029, 1071 |
| Bme18I | GGWCC | 2 cut(s) | 269, 879 |
| BmeT110I | CYCGRG | 9 cut(s) | 110, 305, 371, 551, 581, 602, 632, 653, 683 |
| BmiI | GGNNCC | 7 cut(s) | 176, 271, 329, 347, 382, 696, 801 |
| BmrI | ACTGGG | 4 cut(s) | 489, 843, 1095, 1134 |
| BmuI | ACTGGG | 4 cut(s) | 489, 843, 1095, 1134 |
| BoxI | GACNNNNGTC | 1 cut(s) | 481 |
| BpiI | GAAGAC | 1 cut(s) | 914 |
| BpmI | CTGGAG | 1 cut(s) | 273 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 1215 |
| Bpu14I | TTCGAA | 1 cut(s) | 741 |
| BpuMI | CCSGG | 5 cut(s) | 250, 267, 429, 444, 750 |
| BsaHI | GRCGYC | 5 cut(s) | 62, 542, 593, 644, 1315 |
| BsaI | GGTCTC | 5 cut(s) | 119, 469, 851, 916, 1042 |
| BsaJI | CCNNGG | 5 cut(s) | 306, 428, 944, 1031, 1079 |
| BsaXI | ACNNNNNCTCC | 8 cut(s) | 835, 865, 943, 973, 1087, 1117, 1151, 1181 |
| Bse118I | RCCGGY | 1 cut(s) | 334 |
| Bse1I | ACTGG | 5 cut(s) | 495, 530, 849, 1101, 1140 |
| BseBI | CCWGG | 7 cut(s) | 291, 354, 804, 927, 1005, 1053, 1179 |
| BseDI | CCNNGG | 5 cut(s) | 306, 428, 944, 1031, 1079 |
| BseGI | GGATG | 3 cut(s) | 127, 1288, 1294 |
| BseMII | CTCAG | 6 cut(s) | 186, 696, 726, 876, 903, 1206 |
| BseNI | ACTGG | 5 cut(s) | 495, 530, 849, 1101, 1140 |
| BseRI | GAGGAG | 7 cut(s) | 812, 887, 964, 995, 1165, 1172, 1316 |
| BseX3I | CGGCCG | 1 cut(s) | 100 |
| BseXI | GCAGC | 1 cut(s) | 252 |
| BseYI | CCCAGC | 3 cut(s) | 989, 1037, 1085 |
| Bsh1236I | CGCG | 3 cut(s) | 946, 1124, 1197 |
| Bsh1285I | CGRYCG | 2 cut(s) | 103, 625 |
| BsiEI | CGRYCG | 2 cut(s) | 103, 625 |
| BsiHKAI | GWGCWC | 2 cut(s) | 109, 318 |
| BsiHKCI | CYCGRG | 9 cut(s) | 110, 305, 371, 551, 581, 602, 632, 653, 683 |
| BsiSI | CCGG | 6 cut(s) | 250, 267, 335, 428, 444, 749 |
| BsiWI | CGTACG | 1 cut(s) | 66 |
| BsmAI | GTCTC | 8 cut(s) | 119, 469, 533, 584, 635, 851, 916, 1042 |
| BsmBI | CGTCTC | 3 cut(s) | 533, 584, 635 |
| Bso31I | GGTCTC | 5 cut(s) | 119, 469, 851, 916, 1042 |
| BsoBI | CYCGRG | 9 cut(s) | 110, 305, 371, 551, 581, 602, 632, 653, 683 |
| Bsp119I | TTCGAA | 1 cut(s) | 741 |
| Bsp1286I | GDGCHC | 4 cut(s) | 109, 201, 318, 495 |
| Bsp143I | GATC | 9 cut(s) | 55, 301, 380, 509, 560, 611, 662, 713, 966 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 1215 |
| BspCNI | CTCAG | 6 cut(s) | 187, 697, 727, 875, 904, 1207 |
| BspFNI | CGCG | 3 cut(s) | 946, 1124, 1197 |
| BspLI | GGNNCC | 7 cut(s) | 176, 271, 329, 347, 382, 696, 801 |
| BspMI | ACCTGC | 1 cut(s) | 137 |
| BspQI | GCTCTTC | 1 cut(s) | 933 |
| BspT104I | TTCGAA | 1 cut(s) | 741 |
| BspTNI | GGTCTC | 5 cut(s) | 119, 469, 851, 916, 1042 |
| BsrBI | CCGCTC | 1 cut(s) | 172 |
| BsrFI | RCCGGY | 1 cut(s) | 334 |
| BsrI | ACTGG | 5 cut(s) | 495, 530, 849, 1101, 1140 |
| BssAI | RCCGGY | 1 cut(s) | 334 |
| BssECI | CCNNGG | 5 cut(s) | 306, 428, 944, 1031, 1079 |
| BssMI | GATC | 9 cut(s) | 55, 301, 380, 509, 560, 611, 662, 713, 966 |
| BssNI | GRCGYC | 5 cut(s) | 62, 542, 593, 644, 1315 |
| BssSI | CACGAG | 1 cut(s) | 1236 |
| BssT1I | CCWWGG | 1 cut(s) | 1031 |
| Bst2BI | CACGAG | 1 cut(s) | 1236 |
| Bst2UI | CCWGG | 7 cut(s) | 291, 354, 804, 927, 1005, 1053, 1179 |
| Bst4CI | ACNGT | 3 cut(s) | 71, 458, 623 |
| Bst6I | CTCTTC | 2 cut(s) | 210, 933 |
| BstACI | GRCGYC | 5 cut(s) | 62, 542, 593, 644, 1315 |
| BstBI | TTCGAA | 1 cut(s) | 741 |
| BstC8I | GCNNGC | 1 cut(s) | 1175 |
| BstDEI | CTNAG | 7 cut(s) | 195, 705, 735, 862, 912, 1215, 1224 |
| BstDSI | CCRYGG | 1 cut(s) | 944 |
| BstF5I | GGATG | 3 cut(s) | 127, 1288, 1294 |
| BstFNI | CGCG | 3 cut(s) | 946, 1124, 1197 |
| BstHHI | GCGC | 2 cut(s) | 1124, 1197 |
| BstKTI | GATC | 9 cut(s) | 58, 304, 383, 512, 563, 614, 665, 716, 969 |
| BstMAI | GTCTC | 8 cut(s) | 119, 469, 533, 584, 635, 851, 916, 1042 |
| BstMBI | GATC | 9 cut(s) | 55, 301, 380, 509, 560, 611, 662, 713, 966 |
| BstMCI | CGRYCG | 2 cut(s) | 103, 625 |
| BstMWI | GCNNNNNNNGC | 7 cut(s) | 752, 829, 952, 1027, 1033, 1075, 1254 |
| BstNI | CCWGG | 7 cut(s) | 291, 354, 804, 927, 1005, 1053, 1179 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 481 |
| BstSFI | CTRYAG | 1 cut(s) | 1249 |
| BstUI | CGCG | 3 cut(s) | 946, 1124, 1197 |
| BstV1I | GCAGC | 1 cut(s) | 252 |
| BstV2I | GAAGAC | 1 cut(s) | 914 |
| BstX2I | RGATCY | 7 cut(s) | 380, 509, 560, 611, 662, 713, 966 |
| BstYI | RGATCY | 7 cut(s) | 380, 509, 560, 611, 662, 713, 966 |
| BstZI | CGGCCG | 1 cut(s) | 100 |
| BsuI | GTATCC | 1 cut(s) | 71 |
| BtgI | CCRYGG | 1 cut(s) | 944 |
| BtgZI | GCGATG | 2 cut(s) | 39, 129 |
| BtsCI | GGATG | 3 cut(s) | 127, 1288, 1294 |
| BtsIMutI | CAGTG | 1 cut(s) | 537 |
| BveI | ACCTGC | 1 cut(s) | 137 |
| Cac8I | GCNNGC | 1 cut(s) | 1175 |
| CfoI | GCGC | 2 cut(s) | 1124, 1197 |
| Cfr10I | RCCGGY | 1 cut(s) | 334 |
| Cfr42I | CCGCGG | 1 cut(s) | 947 |
| CseI | GACGC | 5 cut(s) | 70, 550, 601, 652, 1208 |
| CsiI | ACCWGGT | 1 cut(s) | 925 |
| CviAII | CATG | 2 cut(s) | 404, 710 |
| DdeI | CTNAG | 7 cut(s) | 195, 705, 735, 862, 912, 1215, 1224 |
| DpnI | GATC | 9 cut(s) | 57, 303, 382, 511, 562, 613, 664, 715, 968 |
| DpnII | GATC | 9 cut(s) | 55, 301, 380, 509, 560, 611, 662, 713, 966 |
| EaeI | YGGCCR | 3 cut(s) | 100, 520, 571 |
| EagI | CGGCCG | 1 cut(s) | 100 |
| Eam1104I | CTCTTC | 2 cut(s) | 210, 933 |
| EarI | CTCTTC | 2 cut(s) | 210, 933 |
| EciI | GGCGGA | 2 cut(s) | 90, 372 |
| EclXI | CGGCCG | 1 cut(s) | 100 |
| Eco130I | CCWWGG | 1 cut(s) | 1031 |
| Eco147I | AGGCCT | 3 cut(s) | 955, 1003, 1177 |
| Eco24I | GRGCYC | 2 cut(s) | 201, 495 |
| Eco31I | GGTCTC | 5 cut(s) | 119, 469, 851, 916, 1042 |
| Eco47I | GGWCC | 2 cut(s) | 269, 879 |
| Eco52I | CGGCCG | 1 cut(s) | 100 |
| Eco88I | CYCGRG | 9 cut(s) | 110, 305, 371, 551, 581, 602, 632, 653, 683 |
| EcoO109I | RGGNCCY | 1 cut(s) | 327 |
| EcoRII | CCWGG | 7 cut(s) | 289, 352, 802, 925, 1003, 1051, 1177 |
| EcoT14I | CCWWGG | 1 cut(s) | 1031 |
| EcoT38I | GRGCYC | 2 cut(s) | 201, 495 |
| ErhI | CCWWGG | 1 cut(s) | 1031 |
| Esp3I | CGTCTC | 3 cut(s) | 533, 584, 635 |
| FaeI | CATG | 2 cut(s) | 407, 713 |
| FatI | CATG | 2 cut(s) | 403, 709 |
| FauI | CCCGC | 1 cut(s) | 280 |
| FauNDI | CATATG | 1 cut(s) | 208 |
| Fnu4HI | GCNGC | 8 cut(s) | 173, 241, 821, 944, 1022, 1025, 1028, 1070 |
| FokI | GGATG | 3 cut(s) | 134, 1295, 1301 |
| FriOI | GRGCYC | 2 cut(s) | 201, 495 |
| Fsp4HI | GCNGC | 8 cut(s) | 173, 241, 821, 944, 1022, 1025, 1028, 1070 |
| FspBI | CTAG | 1 cut(s) | 957 |
| GlaI | GCGC | 2 cut(s) | 1123, 1196 |
| GluI | GCNGC | 8 cut(s) | 173, 241, 821, 944, 1022, 1025, 1028, 1070 |
| GsaI | CCCAGC | 3 cut(s) | 993, 1041, 1089 |
| GsuI | CTGGAG | 1 cut(s) | 273 |
| HapII | CCGG | 6 cut(s) | 250, 267, 335, 428, 444, 749 |
| HgaI | GACGC | 5 cut(s) | 70, 550, 601, 652, 1208 |
| HhaI | GCGC | 2 cut(s) | 1124, 1197 |
| Hin1I | GRCGYC | 5 cut(s) | 62, 542, 593, 644, 1315 |
| Hin1II | CATG | 2 cut(s) | 407, 713 |
| Hin6I | GCGC | 2 cut(s) | 1122, 1195 |
| HinP1I | GCGC | 2 cut(s) | 1122, 1195 |
| HinfI | GANTC | 3 cut(s) | 482, 701, 759 |
| HpaII | CCGG | 6 cut(s) | 250, 267, 335, 428, 444, 749 |
| HphI | GGTGA | 2 cut(s) | 1211, 1310 |
| Hpy166II | GTNNAC | 3 cut(s) | 37, 285, 535 |
| Hpy188III | TCNNGA | 6 cut(s) | 38, 110, 224, 305, 698, 1238 |
| Hpy8I | GTNNAC | 3 cut(s) | 37, 285, 535 |
| Hpy99I | CGWCG | 5 cut(s) | 50, 64, 121, 474, 1317 |
| HpyAV | CCTTC | 2 cut(s) | 159, 1238 |
| HpyCH4III | ACNGT | 3 cut(s) | 71, 458, 623 |
| HpyCH4IV | ACGT | 1 cut(s) | 1315 |
| HpyCH4V | TGCA | 1 cut(s) | 206 |
| HpyF10VI | GCNNNNNNNGC | 7 cut(s) | 752, 829, 952, 1027, 1033, 1075, 1254 |
| HpyF3I | CTNAG | 7 cut(s) | 195, 705, 735, 862, 912, 1215, 1224 |
| HpySE526I | ACGT | 1 cut(s) | 1315 |
| Hsp92I | GRCGYC | 5 cut(s) | 62, 542, 593, 644, 1315 |
| Hsp92II | CATG | 2 cut(s) | 407, 713 |
| HspAI | GCGC | 2 cut(s) | 1122, 1195 |
| KspI | CCGCGG | 1 cut(s) | 947 |
| Kzo9I | GATC | 9 cut(s) | 55, 301, 380, 509, 560, 611, 662, 713, 966 |
| LguI | GCTCTTC | 1 cut(s) | 933 |
| LmnI | GCTCC | 5 cut(s) | 700, 752, 799, 1152, 1159 |
| Lsp1109I | GCAGC | 1 cut(s) | 252 |
| MabI | ACCWGGT | 1 cut(s) | 925 |
| MaeI | CTAG | 1 cut(s) | 957 |
| MaeII | ACGT | 1 cut(s) | 1315 |
| MaeIII | GTNAC | 1 cut(s) | 1316 |
| MalI | GATC | 9 cut(s) | 57, 303, 382, 511, 562, 613, 664, 715, 968 |
| MbiI | CCGCTC | 1 cut(s) | 172 |
| MboI | GATC | 9 cut(s) | 55, 301, 380, 509, 560, 611, 662, 713, 966 |
| MboII | GAAGA | 3 cut(s) | 227, 919, 950 |
| MflI | RGATCY | 7 cut(s) | 380, 509, 560, 611, 662, 713, 966 |
| MhlI | GDGCHC | 4 cut(s) | 109, 201, 318, 495 |
| MluCI | AATT | 1 cut(s) | 179 |
| MlyI | GAGTC | 1 cut(s) | 491 |
| MmeI | TCCRAC | 3 cut(s) | 83, 99, 401 |
| MspA1I | CMGCKG | 2 cut(s) | 17, 946 |
| MspI | CCGG | 6 cut(s) | 250, 267, 335, 428, 444, 749 |
| MvaI | CCWGG | 7 cut(s) | 291, 354, 804, 927, 1005, 1053, 1179 |
| MvnI | CGCG | 3 cut(s) | 946, 1124, 1197 |
| MwoI | GCNNNNNNNGC | 7 cut(s) | 752, 829, 952, 1027, 1033, 1075, 1254 |
| NciI | CCSGG | 5 cut(s) | 250, 267, 429, 444, 750 |
| NdeI | CATATG | 1 cut(s) | 208 |
| NdeII | GATC | 9 cut(s) | 55, 301, 380, 509, 560, 611, 662, 713, 966 |
| NlaIII | CATG | 2 cut(s) | 407, 713 |
| NlaIV | GGNNCC | 7 cut(s) | 176, 271, 329, 347, 382, 696, 801 |
| NmeAIII | GCCGAG | 3 cut(s) | 810, 849, 1104 |
| NmuCI | GTSAC | 1 cut(s) | 1316 |
| NspV | TTCGAA | 1 cut(s) | 741 |
| PaeR7I | CTCGAG | 1 cut(s) | 110 |
| PceI | AGGCCT | 3 cut(s) | 955, 1003, 1177 |
| PciSI | GCTCTTC | 1 cut(s) | 933 |
| PcsI | WCGNNNNNNNCGW | 5 cut(s) | 27, 36, 45, 51, 696 |
| PfeI | GAWTC | 2 cut(s) | 701, 759 |
| Pfl23II | CGTACG | 1 cut(s) | 66 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 839 |
| PkrI | GCNGC | 8 cut(s) | 174, 242, 822, 945, 1023, 1026, 1029, 1071 |
| PleI | GAGTC | 1 cut(s) | 490 |
| PpsI | GAGTC | 1 cut(s) | 490 |
| PshAI | GACNNNNGTC | 1 cut(s) | 481 |
| Psp6I | CCWGG | 7 cut(s) | 289, 352, 802, 925, 1003, 1051, 1177 |
| PspFI | CCCAGC | 3 cut(s) | 989, 1037, 1085 |
| PspGI | CCWGG | 7 cut(s) | 289, 352, 802, 925, 1003, 1051, 1177 |
| PspLI | CGTACG | 1 cut(s) | 66 |
| PspN4I | GGNNCC | 7 cut(s) | 176, 271, 329, 347, 382, 696, 801 |
| PsuI | RGATCY | 7 cut(s) | 380, 509, 560, 611, 662, 713, 966 |
| PvuII | CAGCTG | 1 cut(s) | 17 |
| SacII | CCGCGG | 1 cut(s) | 947 |
| SapI | GCTCTTC | 1 cut(s) | 933 |
| SatI | GCNGC | 8 cut(s) | 173, 241, 821, 944, 1022, 1025, 1028, 1070 |
| Sau3AI | GATC | 9 cut(s) | 55, 301, 380, 509, 560, 611, 662, 713, 966 |
| SchI | GAGTC | 1 cut(s) | 491 |
| SduI | GDGCHC | 4 cut(s) | 109, 201, 318, 495 |
| SexAI | ACCWGGT | 1 cut(s) | 925 |
| SfcI | CTRYAG | 1 cut(s) | 1249 |
| Sfr274I | CTCGAG | 1 cut(s) | 110 |
| Sfr303I | CCGCGG | 1 cut(s) | 947 |
| SfuI | TTCGAA | 1 cut(s) | 741 |
| SgrBI | CCGCGG | 1 cut(s) | 947 |
| SinI | GGWCC | 2 cut(s) | 269, 879 |
| SlaI | CTCGAG | 1 cut(s) | 110 |
| SmlI | CTYRAG | 1 cut(s) | 110 |
| SmoI | CTYRAG | 1 cut(s) | 110 |
| Sse9I | AATT | 1 cut(s) | 179 |
| SseBI | AGGCCT | 3 cut(s) | 955, 1003, 1177 |
| SspMI | CTAG | 1 cut(s) | 957 |
| StuI | AGGCCT | 3 cut(s) | 955, 1003, 1177 |
| StyI | CCWWGG | 1 cut(s) | 1031 |
| TaaI | ACNGT | 3 cut(s) | 71, 458, 623 |
| TaiI | ACGT | 1 cut(s) | 1318 |
| TaqI | TCGA | 7 cut(s) | 45, 111, 162, 225, 469, 625, 741 |
| TasI | AATT | 1 cut(s) | 179 |
| TatI | WGTACW | 1 cut(s) | 234 |
| TauI | GCSGC | 7 cut(s) | 175, 823, 946, 1024, 1027, 1030, 1072 |
| TfiI | GAWTC | 2 cut(s) | 701, 759 |
| TscAI | CASTG | 1 cut(s) | 537 |
| TseFI | GTSAC | 1 cut(s) | 1316 |
| TseI | GCWGC | 1 cut(s) | 240 |
| Tsp45I | GTSAC | 1 cut(s) | 1316 |
| TspDTI | ATGAA | 4 cut(s) | 174, 450, 789, 1224 |
| TspGWI | ACGGA | 5 cut(s) | 333, 487, 793, 1026, 1074 |
| TspRI | CASTG | 1 cut(s) | 537 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 839 |
| VpaK11BI | GGWCC | 2 cut(s) | 269, 879 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 338 |
| XhoI | CTCGAG | 1 cut(s) | 110 |
| XspI | CTAG | 1 cut(s) | 957 |
| ZraI | GACGTC | 1 cut(s) | 1316 |