Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp03

Orthogroup ID

OG0001301

Physical Location & Seq

Genomic Coordinates Reverse (-)

27109771 .. 27118298

Gene Structure 8528 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.3G313300.4

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3075 bp

ATGGCGATTCGGTTAGTCTTTTGCTGCTTGCTTATTATCTTGGTCGGATTTCTGGTCGCCGATTCCAAGTTTATGGTATATAACACTTCCCAAGGGATAGTCCCCGGAAAAATTAATGTCCATTTGGTCCCTCACACCCACGACGACGTTGGCTGGTTAAAGACCGTTGATCAGTATTATGTTGGCTCCAACAATTCCATCCAGGGGGCTTGCGTGCAAAATGTGTTGGATTCTTTAGTTCCCGCTCTGCTGGCTGACAAGAATCGAAAGTTTATTTATGTTGAACAGGCATTCTTCCAGCGCTGGTGGAGAGATCAGAGTGAGGCCGTCCAGAGTATAGTCAAGCAGCTAGTCAGCTCGGGTCAATTGGAATTCATAAATGGGGGGATGTGTATGCATGATGAGGCAGCAACGCATTACATTGATATAATTGATCAGACGACTCTTGGGCATCGGTTTATTAAAAAGGAATTTGATGTGACTCCAAGAATTGGTTGGCAAATTGACCCCTTTGGACATTCAGCAGTCCAGGCTTACTTGTTGGGAGCAGAAGTTGGGTTTGACTCACTTTTCTTTGGTCGAATAGATTACCAGGACAGGGATAAACGCAAAAATGACAAGAGCCTTGAATTTGTTTGGCAAGGTTCGAAGAGTCTTGGTTCATCTGCTCAGATTTTTTCTGGTGCATTCCCTAAGAATTACGAGCCTCCATCTGGTTTCTATTTTGAAGTAAATGATGATTCGCCAATTGTTCAGGATGACATCACTTTGTTTGATTACAATGTTCAAGACCGTGTTAACAACTTTGTTGCTGCAGCAGTATCACAGGCTAACATAACTCGGACAGATCATATAATGTGGACCATGGGAACAGATTTTAAGTATCAGTATGCACACACATGGTTCCGTCAAATGGACAAGCTCATTCATTATGTGAACAAGGATGGACGTGTTAATGCTCTGTATTCTACTCCATCCATATATACTGATGCAAAGTATGCTACAAATGAATCGTGGCCAATCAAGACTGATGATTTCTTTCCTTATGCAGATCGTACTAATGCTTACTGGACAGGGTATTTCACAAGTAGACCAGCTTTGAAATACTATGTTAGAACAATGAGCGGCTATTATTTGGCTGCAAGGCAACTAGAATTTTTAAAAGGAAGGACTAATTCAGGGCTGAACACAGACTCATTGGCTGATGCCTTAGCAATCGCTCAACATCATGATGCAGTCACTGGTACAGAGAAGCAACATGTTGCCAATGATTATGCAAAAAGATTGTCGATAGGCTACACAGAGGCTGAGCAACTAGTTGCAACATCACTTGCGCACTTGGTTGAGTCTGCTTCATACACTGGATCTGGAAACCCAATTACAGAGTTTCAACAGTGCCCACTTCTGAATATAAGCTACTGCCCTGCGGCAGAAGTGAATTTGTCTCAAGGGAAACAATTGATTGTCGTGGTGTACAATTCTCTAGGATGGAAGAGGAATGATGTAATTCGAATTCCTGTTATCAATGAAGATGTCACTGTTCAAGACTCTGAGGGAAGAGAAATTGAATCACAGCTTCTTCCACTAGATGATGCCCATGTGGGCTTAAGGAACTACCATGTTAAGGCATACTTGGGTCGAACTCCAACGAACACACCAAATTATTGGCTTGCATTTACAGTATCTGTACCGCCACTTGGTTTCAGCACATACACTATCTCAGATGCCAAAGGAGCAGGTGCTTGTTCCACCAGATCATCTGTATACACATTTCAAGGTAGGGAAAAGTCCACTGTTGAAGTTGGTCAAGGAAATGTGAAACTTACTTTTTCCACAGATCAAGGCAAAATGACTAACTATGTCAATAGAAGAAGCTTGGTTGAAGAATTGGTTGAGCAGTCTTACAGTTTTTATACTGCATATAATGGCAGTAGTGATGAAGCTCCTCTGATTCCTCAGAATTCTGGGGCATATGTTTTCCGTCCGAATGGTACATTTCTCATAAATCCTGGAGAAAAGGCTTCTTTTACTGTTATGCGTGGACCAATAATAGATGAAGTACATCAACATATTAATTCATGGATATATCAGATCACGAGACTTCACAAGGAGAAGGAGCATGTTGAAGTCGAGTTTATTGTTGGGCCTATACCTATTGATGATGGAACTGGCAAAGAAGTTGTAACTCAAATAGCCACTACCATGGCTACCAACAAAACTTTCTACACTGATTCAAATGGGCGTGATTTTATCAAAAGGATTCGCGACTATAGAACAGATTGGGACCTGAAAGTGCACCAACCTATTGCGGGAAATTATTATCCAATTAATCTTGGGATTTACATGCAAGATAACAGGGCAGAATTTTCAGTTTTGGTGGATCGATCTATAGGAGGATCCAGCACAGTGGATGGACAGATAGACTTGATGCTCCACAGGAGACTACTGCTTGATGATTCAAGAGGCGTTGCCGAAGCTTTAAATGAAACAGTCTGTGTTCCCAACGATTGCACTGGACTAAGAATCCAAGGAAAGTTTTATTTCAGAATTGACCCCATGGGAGATGGTGCTAAGTGGCGTCGTTCTTTTGGTCAGGAGATATATTCCCCTCTTCTATTAGCCTTTGCTGAACAGGATGGAGATAACTGGAAGAATTCTCATGTAACCACTTTCTCAGGGGTTGGTTCCTCGTACAGTTTACCTGATAATGTTGCTCTTATAACTCTTCAGGAGCTTGATGATGGAAAAGTTCTCCTTCGATTAGCACATTTATATGAGATTGGAGAGGACAAGGATCTTTCTGTAATGGCAAATGTAGAGCTGAAGCAGCTCTTCCCAAGGAAGAAGATTGGCGAAGTTACAGAGATGAACTTATCAGCAAATCAAGAAAGAGCAGAAATGGAGAAAAAGAGACTGGTTTGGAAAGTGGAAGAAGGCTCTGCAGAAGAAGCAAAGGTTGTGAGGGGTGGAAGGGTTGATCCTGCAAAACTGGTGGTGGAACTTGGCCCAATGGAAATCCGAACCTTTCTCATTGAGTTTAAGCAAAGGTTCCATCGTGATATGGCTGATGCCTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000323 GO:0001775 GO:0002252 GO:0002263 GO:0002274 GO:0002275 GO:0002283 GO:0002366 GO:0002376 GO:0002443 GO:0002444 GO:0002446 GO:0003674 GO:0003824 GO:0004553 GO:0004559 GO:0005575 GO:0005576 GO:0005615 GO:0005622 GO:0005623 GO:0005737 GO:0005764 GO:0005766 GO:0005773 GO:0005775 GO:0005975 GO:0005996 GO:0006013 GO:0006464 GO:0006517 GO:0006807 GO:0006810 GO:0006887 GO:0006955 GO:0008150 GO:0008152 GO:0009056 GO:0009100 GO:0009311 GO:0009313 GO:0009987 GO:0012505 GO:0015923 GO:0016052 GO:0016192 GO:0016787 GO:0016798 GO:0019318 GO:0019538 GO:0030141 GO:0031410 GO:0031974 GO:0031982 GO:0031983 GO:0032940 GO:0034774 GO:0035578 GO:0036211 GO:0036230 GO:0042119 GO:0042582 GO:0043170 GO:0043202 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0043299 GO:0043312 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044281 GO:0044421 GO:0044422 GO:0044424 GO:0044433 GO:0044437 GO:0044444 GO:0044446 GO:0044464 GO:0045055 GO:0045321 GO:0046903 GO:0050896 GO:0051179 GO:0051234 GO:0060205 GO:0070013 GO:0071704 GO:0097708 GO:0099503 GO:1901135 GO:1901564 GO:1901575

KEGG Pathways

Metabolic & Signaling

ko00511 map00511

Pfam Domains

Protein Families

Alpha-mann_mid Glyco_hydro_38 Glyco_hydro_38C

Protein Analysis

1025

Amino Acids

115.58

Weight (kDa)

5.65

Isoelectric Point (pI)

35.19

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001301)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G13980 AT5G13980 AT5G13980
fragaria_vesca	FvH4_5g09420 FvH4_5g09421 FvH4_6g54272 FvH4_6g54272 FvH4_6g54272 FvH4_6g54272 FvH4_6g54272
malus_domestica	MD06G1131600.v1.1 MD09G1002900.v1.1 MD17G1007000.v1.1
prunus_persica	Prupe.3G313300_v2.0.a1 Prupe.3G313300_v2.0.a1 Prupe.3G313300_v2.0.a1 Prupe.3G313300_v2.0.a1 Prupe.5G142600_v2.0.a1 Prupe.5G142600_v2.0.a1
pyrus_communis	pycom06g12300 pycom06g12310 pycom111g00240 pycom17g00260
rosa_chinensis	RchiOBHm_Chr2g0176471 RchiOBHm_Chr2g0176481 RchiOBHm_Chr7g0188771 RchiOBHm_Chr7g0188781
rosa_laevigata	RLG00000004661 RLG00000004662 RLG00000022416
rosa_multiflora	Rmu_sc0000303.1_g000057 Rmu_sc0003642.1_g000008 Rmu_sc0011904.1_g000012
rosa_roxburghii	Rroxscaffold_2G00076370 Rroxscaffold_3G00266040 Rroxscaffold_3G00266050
rosa_rugosa	Rorug02G0595000 Rorug06G0493700
rosa_samantha	Rh2AG673300 Rh2BG684600 Rh2CG647400 Rh2DG698200 Rh7AG098300 Rh7AG098400 Rh7BG099900 Rh7BG100200 Rh7CG101600 Rh7CG101700 Rh7DG100100 Rh7DG100200
rosa_wichuraiana	Rw0G010390 Rw2G055220 Rw7G008480 Rw7G008490

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	2720
AarI	CACCTGC	1 cut(s)	1727
Acc16I	TGCGCA	1 cut(s)	1335
Acc36I	ACCTGC	1 cut(s)	1727
AccB7I	CCANNNNNTGG	1 cut(s)	491
AccBSI	CCGCTC	2 cut(s)	245, 1125
AccI	GTMKAC	2 cut(s)	1090, 1764
AccII	CGCG	1 cut(s)	2265
AciI	CCGC	5 cut(s)	243, 1125, 1427, 1691, 2309
AclWI	GGATC	6 cut(s)	1372, 2388, 2391, 2404, 2802, 2972
AcoI	YGGCCR	1 cut(s)	1016
AcsI	RAATTY	9 cut(s)	371, 470, 629, 1154, 1438, 1512, 1960, 2363, 2653
AcuI	CTGAAG	2 cut(s)	2711, 2843
AcyI	GRCGYC	1 cut(s)	2578
AfaI	GTAC	7 cut(s)	1057, 1246, 1475, 1689, 1993, 2061, 2693
AfeI	AGCGCT	1 cut(s)	302
AfiI	CCNNNNNNNGG	8 cut(s)	204, 491, 598, 713, 913, 1624, 1697, 2309
AflII	CTTAAG	1 cut(s)	1606
AflIII	ACRYGT	2 cut(s)	949, 1258
AhlI	ACTAGT	1 cut(s)	1315
AjiI	CACGTC	1 cut(s)	950
AjnI	CCWGG	4 cut(s)	201, 528, 591, 2008
AjuI	GAANNNNNNNTTGG	2 cut(s)	2204, 2236
Alw21I	GWGCWC	1 cut(s)	2298
Alw26I	GTCTC	4 cut(s)	1449, 2092, 2434, 2905
Alw44I	GTGCAC	1 cut(s)	2294
AlwI	GGATC	6 cut(s)	1372, 2388, 2391, 2404, 2802, 2972
AlwNI	CAGNNNCTG	3 cut(s)	1241, 1307, 1685
Ama87I	CYCGRG	1 cut(s)	358
Aor51HI	AGCGCT	1 cut(s)	302
AoxI	GGCC	4 cut(s)	324, 1016, 2144, 3004
ApaLI	GTGCAC	1 cut(s)	2294
ApeKI	GCWGC	7 cut(s)	24, 346, 407, 812, 815, 1139, 2827
ApoI	RAATTY	9 cut(s)	371, 470, 629, 1154, 1438, 1512, 1960, 2363, 2653
ArsI	GACNNNNNNTTYG	2 cut(s)	1271, 1303
AseI	ATTAAT	3 cut(s)	114, 2073, 2328
AspLEI	GCGC	2 cut(s)	303, 1336
AspS9I	GGNCC	6 cut(s)	127, 861, 2042, 2144, 2284, 3005
AsuC2I	CCSGG	1 cut(s)	105
AsuII	TTCGAA	2 cut(s)	647, 1510
AvaI	CYCGRG	1 cut(s)	358
AvaII	GGWCC	4 cut(s)	127, 861, 2042, 2284
BaeGI	GKGCMC	2 cut(s)	1400, 2298
BalI	TGGCCA	1 cut(s)	1018
BamHI	GGATCC	1 cut(s)	2396
BauI	CACGAG	1 cut(s)	2095
Bbv12I	GWGCWC	1 cut(s)	2298
BbvI	GCAGC	7 cut(s)	11, 358, 419, 799, 827, 1126, 2839
BceAI	ACGGC	1 cut(s)	311
BciT130I	CCWGG	4 cut(s)	203, 530, 593, 2010
BclI	TGATCA	2 cut(s)	169, 433
BcnI	CCSGG	1 cut(s)	105
BcoDI	GTCTC	4 cut(s)	1449, 2092, 2434, 2905
BcuI	ACTAGT	1 cut(s)	1315
BfaI	CTAG	5 cut(s)	350, 1151, 1316, 1484, 1586
BfmI	CTRYAG	4 cut(s)	813, 2269, 2388, 2940
BfoI	RGCGCY	1 cut(s)	304
BfrI	CTTAAG	1 cut(s)	1606
BfuAI	ACCTGC	1 cut(s)	1727
BisI	GCNGC	9 cut(s)	25, 347, 408, 813, 816, 1126, 1140, 1428, 2828
BlpI	GCTNAGC	1 cut(s)	1308
BlsI	GCNGC	9 cut(s)	26, 348, 409, 814, 817, 1127, 1141, 1429, 2829
Bme1390I	CCNGG	5 cut(s)	105, 203, 530, 593, 2010
Bme18I	GGWCC	4 cut(s)	127, 861, 2042, 2284
BmeT110I	CYCGRG	1 cut(s)	358
BmgBI	CACGTC	1 cut(s)	950
BmgT120I	GGNCC	6 cut(s)	127, 861, 2042, 2144, 2284, 3005
BmiI	GGNNCC	7 cut(s)	129, 187, 905, 2285, 2398, 2686, 3050
BmrFI	CCNGG	5 cut(s)	105, 203, 530, 593, 2010
BmsI	GCATC	8 cut(s)	460, 979, 1195, 1222, 1582, 1714, 2418, 3058
BpmI	CTGGAG	1 cut(s)	2031
Bpu10I	CCTNAGC	1 cut(s)	1210
Bpu1102I	GCTNAGC	1 cut(s)	1308
Bpu14I	TTCGAA	2 cut(s)	647, 1510
BpuEI	CTTGAG	1 cut(s)	1431
BpuMI	CCSGG	1 cut(s)	105
Bsa29I	ATCGAT	1 cut(s)	2383
BsaHI	GRCGYC	1 cut(s)	2578
BsaJI	CCNNGG	8 cut(s)	91, 103, 202, 864, 2202, 2527, 2556, 2837
BsaXI	ACNNNNNCTCC	2 cut(s)	537, 567
Bsc4I	CCNNNNNNNGG	8 cut(s)	204, 491, 598, 713, 913, 1624, 1697, 2309
Bse1I	ACTGG	8 cut(s)	1073, 1246, 1366, 2173, 2518, 2651, 2919, 2994
BseBI	CCWGG	4 cut(s)	203, 530, 593, 2010
BseCI	ATCGAT	1 cut(s)	2383
BseDI	CCNNGG	8 cut(s)	91, 103, 202, 864, 2202, 2527, 2556, 2837
BseGI	GGATG	8 cut(s)	198, 393, 763, 949, 974, 1493, 2416, 2641
BseLI	CCNNNNNNNGG	8 cut(s)	204, 491, 598, 713, 913, 1624, 1697, 2309
BseMII	CTCAG	6 cut(s)	683, 1299, 1542, 1734, 1970, 2688
BseNI	ACTGG	8 cut(s)	1073, 1246, 1366, 2173, 2518, 2651, 2919, 2994
BseRI	GAGGAG	1 cut(s)	1935
BseSI	GKGCMC	2 cut(s)	1400, 2298
BseXI	GCAGC	7 cut(s)	11, 358, 419, 799, 827, 1126, 2839
Bsh1236I	CGCG	1 cut(s)	2265
BshFI	GGCC	4 cut(s)	326, 1018, 2146, 3006
BshVI	ATCGAT	1 cut(s)	2383
BsiHKAI	GWGCWC	1 cut(s)	2298
BsiHKCI	CYCGRG	1 cut(s)	358
BsiSI	CCGG	1 cut(s)	105
BslFI	GGGAC	3 cut(s)	86, 113, 2297
BslI	CCNNNNNNNGG	8 cut(s)	204, 491, 598, 713, 913, 1624, 1697, 2309
BsmAI	GTCTC	4 cut(s)	1449, 2092, 2434, 2905
BsmFI	GGGAC	3 cut(s)	86, 113, 2297
BsmI	GAATGC	2 cut(s)	290, 686
BsnI	GGCC	4 cut(s)	326, 1018, 2146, 3006
BsoBI	CYCGRG	1 cut(s)	358
Bsp119I	TTCGAA	2 cut(s)	647, 1510
Bsp1286I	GDGCHC	2 cut(s)	1400, 2298
Bsp1407I	TGTACA	1 cut(s)	1473
Bsp1720I	GCTNAGC	1 cut(s)	1308
Bsp19I	CCATGG	3 cut(s)	864, 2202, 2556
Bsp68I	TCGCGA	1 cut(s)	2265
BspACI	CCGC	5 cut(s)	243, 1125, 1427, 1691, 2309
BspANI	GGCC	4 cut(s)	326, 1018, 2146, 3006
BspCNI	CTCAG	6 cut(s)	682, 1300, 1543, 1733, 1969, 2687
BspDI	ATCGAT	1 cut(s)	2383
BspFNI	CGCG	1 cut(s)	2265
BspHI	TCATGA	1 cut(s)	1228
BspLI	GGNNCC	7 cut(s)	129, 187, 905, 2285, 2398, 2686, 3050
BspMAI	CTGCAG	2 cut(s)	817, 2944
BspMI	ACCTGC	1 cut(s)	1727
BspPI	GGATC	6 cut(s)	1372, 2388, 2391, 2404, 2802, 2972
BspQI	GCTCTTC	1 cut(s)	2837
BspT104I	TTCGAA	2 cut(s)	647, 1510
BspTI	CTTAAG	1 cut(s)	1606
BsrBI	CCGCTC	2 cut(s)	245, 1125
BsrGI	TGTACA	1 cut(s)	1473
BsrI	ACTGG	8 cut(s)	1073, 1246, 1366, 2173, 2518, 2651, 2919, 2994
BssECI	CCNNGG	8 cut(s)	91, 103, 202, 864, 2202, 2527, 2556, 2837
BssNAI	GTATAC	1 cut(s)	1765
BssNI	GRCGYC	1 cut(s)	2578
BssSI	CACGAG	1 cut(s)	2095
BssT1I	CCWWGG	6 cut(s)	91, 864, 2202, 2527, 2556, 2837
Bst1107I	GTATAC	1 cut(s)	1765
Bst2BI	CACGAG	1 cut(s)	2095
Bst2UI	CCWGG	4 cut(s)	203, 530, 593, 2010
Bst6I	CTCTTC	6 cut(s)	644, 1487, 1552, 2616, 2730, 2837
BstACI	GRCGYC	1 cut(s)	2578
BstAFI	CTTAAG	1 cut(s)	1606
BstAPI	GCANNNNNTGC	1 cut(s)	998
BstAUI	TGTACA	1 cut(s)	1473
BstBI	TTCGAA	2 cut(s)	647, 1510
BstC8I	GCNNGC	5 cut(s)	29, 211, 215, 252, 1671
BstDSI	CCRYGG	3 cut(s)	864, 2202, 2556
BstF5I	GGATG	8 cut(s)	198, 393, 763, 949, 974, 1493, 2416, 2641
BstFNI	CGCG	1 cut(s)	2265
BstH2I	RGCGCY	1 cut(s)	304
BstHHI	GCGC	2 cut(s)	303, 1336
BstMAI	GTCTC	4 cut(s)	1449, 2092, 2434, 2905
BstMWI	GCNNNNNNNGC	6 cut(s)	251, 530, 998, 1733, 2827, 2948
BstNI	CCWGG	4 cut(s)	203, 530, 593, 2010
BstNSI	RCATGY	3 cut(s)	1262, 2123, 2347
BstSCI	CCNGG	5 cut(s)	103, 201, 528, 591, 2008
BstSFI	CTRYAG	4 cut(s)	813, 2269, 2388, 2940
BstSLI	GKGCMC	2 cut(s)	1400, 2298
BstUI	CGCG	1 cut(s)	2265
BstV1I	GCAGC	7 cut(s)	11, 358, 419, 799, 827, 1126, 2839
BstX2I	RGATCY	3 cut(s)	1364, 2396, 2794
BstXI	CCANNNNNNTGG	4 cut(s)	73, 1665, 2203, 2407
BstYI	RGATCY	3 cut(s)	1364, 2396, 2794
BstZ17I	GTATAC	1 cut(s)	1765
Bsu15I	ATCGAT	1 cut(s)	2383
BsuRI	GGCC	4 cut(s)	326, 1018, 2146, 3006
BsuTUI	ATCGAT	1 cut(s)	2383
BtgI	CCRYGG	3 cut(s)	864, 2202, 2556
BtrI	CACGTC	1 cut(s)	950
BtsCI	GGATG	8 cut(s)	198, 393, 763, 949, 974, 1493, 2416, 2641
BtsIMutI	CAGTG	8 cut(s)	1239, 1359, 1400, 1536, 1791, 2226, 2412, 2511
BtuMI	TCGCGA	1 cut(s)	2265
BveI	ACCTGC	1 cut(s)	1727
Cac8I	GCNNGC	5 cut(s)	29, 211, 215, 252, 1671
CaiI	CAGNNNCTG	3 cut(s)	1241, 1307, 1685
CciI	TCATGA	1 cut(s)	1228
CfoI	GCGC	2 cut(s)	303, 1336
Cfr13I	GGNCC	6 cut(s)	127, 861, 2042, 2144, 2284, 3005
ClaI	ATCGAT	1 cut(s)	2383
CseI	GACGC	1 cut(s)	2567
Csp6I	GTAC	7 cut(s)	1056, 1245, 1474, 1688, 1992, 2060, 2692
CspCI	CAANNNNNGTGG	2 cut(s)	2973, 3008
CviQI	GTAC	7 cut(s)	1056, 1245, 1474, 1688, 1992, 2060, 2692
DraI	TTTAAA	2 cut(s)	1161, 2481
EaeI	YGGCCR	1 cut(s)	1016
Eam1104I	CTCTTC	6 cut(s)	644, 1487, 1552, 2616, 2730, 2837
EarI	CTCTTC	6 cut(s)	644, 1487, 1552, 2616, 2730, 2837
Eco130I	CCWWGG	6 cut(s)	91, 864, 2202, 2527, 2556, 2837
Eco47I	GGWCC	4 cut(s)	127, 861, 2042, 2284
Eco47III	AGCGCT	1 cut(s)	302
Eco57I	CTGAAG	2 cut(s)	2711, 2843
Eco88I	CYCGRG	1 cut(s)	358
EcoO109I	RGGNCCY	1 cut(s)	2284
EcoRI	GAATTC	4 cut(s)	371, 1512, 1960, 2653
EcoRII	CCWGG	4 cut(s)	201, 528, 591, 2008
EcoT14I	CCWWGG	6 cut(s)	91, 864, 2202, 2527, 2556, 2837
EcoT22I	ATGCAT	1 cut(s)	399
ErhI	CCWWGG	6 cut(s)	91, 864, 2202, 2527, 2556, 2837
FalI	AAGNNNNNCTT	6 cut(s)	1616, 1648, 2739, 2771, 2816, 2848
FaqI	GGGAC	3 cut(s)	86, 113, 2297
FauI	CCCGC	2 cut(s)	250, 2302
FauNDI	CATATG	1 cut(s)	1972
FbaI	TGATCA	2 cut(s)	169, 433
FblI	GTMKAC	2 cut(s)	1090, 1764
Fnu4HI	GCNGC	9 cut(s)	25, 347, 408, 813, 816, 1126, 1140, 1428, 2828
FokI	GGATG	8 cut(s)	185, 400, 770, 956, 961, 1500, 2423, 2648
Fsp4HI	GCNGC	9 cut(s)	25, 347, 408, 813, 816, 1126, 1140, 1428, 2828
FspBI	CTAG	5 cut(s)	350, 1151, 1316, 1484, 1586
FspI	TGCGCA	1 cut(s)	1335
GlaI	GCGC	2 cut(s)	302, 1335
GluI	GCNGC	9 cut(s)	25, 347, 408, 813, 816, 1126, 1140, 1428, 2828
GsuI	CTGGAG	1 cut(s)	2031
HaeII	RGCGCY	1 cut(s)	304
HaeIII	GGCC	4 cut(s)	326, 1018, 2146, 3006
HapII	CCGG	1 cut(s)	105
HgaI	GACGC	1 cut(s)	2567
HhaI	GCGC	2 cut(s)	303, 1336
Hin1I	GRCGYC	1 cut(s)	2578
Hin6I	GCGC	2 cut(s)	301, 1334
HinP1I	GCGC	2 cut(s)	301, 1334
HincII	GTYRAC	1 cut(s)	799
HindII	GTYRAC	1 cut(s)	799
HindIII	AAGCTT	2 cut(s)	1873, 2475
HpaI	GTTAAC	1 cut(s)	799
HpaII	CCGG	1 cut(s)	105
Hpy99I	CGWCG	3 cut(s)	146, 149, 2583
HpyAV	CCTTC	5 cut(s)	1161, 2107, 2765, 2927, 2964
HpyCH4IV	ACGT	2 cut(s)	147, 949
HpyF10VI	GCNNNNNNNGC	6 cut(s)	251, 530, 998, 1733, 2827, 2948
HpySE526I	ACGT	2 cut(s)	147, 949
Hsp92I	GRCGYC	1 cut(s)	2578
HspAI	GCGC	2 cut(s)	301, 1334
Ksp22I	TGATCA	2 cut(s)	169, 433
KspAI	GTTAAC	1 cut(s)	799
LguI	GCTCTTC	1 cut(s)	2837
LmnI	GCTCC	7 cut(s)	191, 545, 1733, 1948, 2116, 2436, 2731
Lsp1109I	GCAGC	7 cut(s)	11, 358, 419, 799, 827, 1126, 2839
LweI	GCATC	8 cut(s)	460, 979, 1195, 1222, 1582, 1714, 2418, 3058
MaeI	CTAG	5 cut(s)	350, 1151, 1316, 1484, 1586
MaeII	ACGT	2 cut(s)	147, 949
MaeIII	GTNAC	6 cut(s)	478, 1237, 1534, 2182, 2662, 2857
MbiI	CCGCTC	2 cut(s)	245, 1125
MfeI	CAATTG	3 cut(s)	365, 747, 1457
MflI	RGATCY	3 cut(s)	1364, 2396, 2794
MhlI	GDGCHC	2 cut(s)	1400, 2298
MlsI	TGGCCA	1 cut(s)	1018
MluNI	TGGCCA	1 cut(s)	1018
MlyI	GAGTC	7 cut(s)	436, 475, 557, 661, 1187, 1355, 1541
MmeI	TCCRAC	4 cut(s)	25, 207, 213, 1670
Mox20I	TGGCCA	1 cut(s)	1018
Mph1103I	ATGCAT	1 cut(s)	399
MscI	TGGCCA	1 cut(s)	1018
MslI	CAYNNNNRTG	4 cut(s)	898, 1230, 2201, 2772
Msp20I	TGGCCA	1 cut(s)	1018
MspCI	CTTAAG	1 cut(s)	1606
MspI	CCGG	1 cut(s)	105
MspR9I	CCNGG	5 cut(s)	105, 203, 530, 593, 2010
MunI	CAATTG	3 cut(s)	365, 747, 1457
Mva1269I	GAATGC	2 cut(s)	290, 686
MvaI	CCWGG	4 cut(s)	203, 530, 593, 2010
MvnI	CGCG	1 cut(s)	2265
MwoI	GCNNNNNNNGC	6 cut(s)	251, 530, 998, 1733, 2827, 2948
NciI	CCSGG	1 cut(s)	105
NcoI	CCATGG	3 cut(s)	864, 2202, 2556
NdeI	CATATG	1 cut(s)	1972
NlaIV	GGNNCC	7 cut(s)	129, 187, 905, 2285, 2398, 2686, 3050
NmuCI	GTSAC	3 cut(s)	478, 1237, 1534
NruI	TCGCGA	1 cut(s)	2265
NsbI	TGCGCA	1 cut(s)	1335
NsiI	ATGCAT	1 cut(s)	399
NspI	RCATGY	3 cut(s)	1262, 2123, 2347
NspV	TTCGAA	2 cut(s)	647, 1510
PagI	TCATGA	1 cut(s)	1228
PaqCI	CACCTGC	1 cut(s)	1727
PciI	ACATGT	1 cut(s)	1258
PciSI	GCTCTTC	1 cut(s)	2837
PctI	GAATGC	2 cut(s)	290, 686
PflMI	CCANNNNNTGG	1 cut(s)	491
PfoI	TCCNGGA	1 cut(s)	2008
PkrI	GCNGC	9 cut(s)	26, 348, 409, 814, 817, 1127, 1141, 1429, 2829
PleI	GAGTC	7 cut(s)	436, 475, 557, 660, 1187, 1354, 1541
PpsI	GAGTC	7 cut(s)	436, 475, 557, 660, 1187, 1354, 1541
PpuMI	RGGWCCY	1 cut(s)	2284
PscI	ACATGT	1 cut(s)	1258
PshBI	ATTAAT	3 cut(s)	114, 2073, 2328
PsiI	TTATAA	1 cut(s)	2720
Psp5II	RGGWCCY	1 cut(s)	2284
Psp6I	CCWGG	4 cut(s)	201, 528, 591, 2008
PspGI	CCWGG	4 cut(s)	201, 528, 591, 2008
PspN4I	GGNNCC	7 cut(s)	129, 187, 905, 2285, 2398, 2686, 3050
PspPI	GGNCC	6 cut(s)	127, 861, 2042, 2144, 2284, 3005
PspPPI	RGGWCCY	1 cut(s)	2284
PstI	CTGCAG	2 cut(s)	817, 2944
PstNI	CAGNNNCTG	3 cut(s)	1241, 1307, 1685
PsuI	RGATCY	3 cut(s)	1364, 2396, 2794
RruI	TCGCGA	1 cut(s)	2265
RsaI	GTAC	7 cut(s)	1057, 1246, 1475, 1689, 1993, 2061, 2693
RsaNI	GTAC	7 cut(s)	1056, 1245, 1474, 1688, 1992, 2060, 2692
RseI	CAYNNNNRTG	4 cut(s)	898, 1230, 2201, 2772
SapI	GCTCTTC	1 cut(s)	2837
SatI	GCNGC	9 cut(s)	25, 347, 408, 813, 816, 1126, 1140, 1428, 2828
Sau96I	GGNCC	6 cut(s)	127, 861, 2042, 2144, 2284, 3005
SchI	GAGTC	7 cut(s)	436, 475, 557, 661, 1187, 1355, 1541
ScrFI	CCNGG	5 cut(s)	105, 203, 530, 593, 2010
SduI	GDGCHC	2 cut(s)	1400, 2298
SfaNI	GCATC	8 cut(s)	460, 979, 1195, 1222, 1582, 1714, 2418, 3058
SfcI	CTRYAG	4 cut(s)	813, 2269, 2388, 2940
SfuI	TTCGAA	2 cut(s)	647, 1510
SinI	GGWCC	4 cut(s)	127, 861, 2042, 2284
SmiMI	CAYNNNNRTG	4 cut(s)	898, 1230, 2201, 2772
SmlI	CTYRAG	2 cut(s)	1446, 1606
SmoI	CTYRAG	2 cut(s)	1446, 1606
SpeI	ACTAGT	1 cut(s)	1315
SsiI	CCGC	5 cut(s)	243, 1125, 1427, 1691, 2309
SspMI	CTAG	5 cut(s)	350, 1151, 1316, 1484, 1586
StyD4I	CCNGG	5 cut(s)	103, 201, 528, 591, 2008
StyI	CCWWGG	6 cut(s)	91, 864, 2202, 2527, 2556, 2837
TaiI	ACGT	2 cut(s)	150, 952
TaqI	TCGA	9 cut(s)	265, 580, 647, 1289, 1510, 1639, 2130, 2383, 2758
TatI	WGTACW	2 cut(s)	1473, 2059
TauI	GCSGC	2 cut(s)	1128, 1430
TscAI	CASTG	8 cut(s)	1246, 1366, 1400, 1543, 1798, 2233, 2412, 2518
TseFI	GTSAC	3 cut(s)	478, 1237, 1534
TseI	GCWGC	7 cut(s)	24, 346, 407, 812, 815, 1139, 2827
Tsp45I	GTSAC	3 cut(s)	478, 1237, 1534
TspGWI	ACGGA	2 cut(s)	896, 1970
TspRI	CASTG	8 cut(s)	1246, 1366, 1400, 1543, 1798, 2233, 2412, 2518
Van91I	CCANNNNNTGG	1 cut(s)	491
Vha464I	CTTAAG	1 cut(s)	1606
VneI	GTGCAC	1 cut(s)	2294
VpaK11BI	GGWCC	4 cut(s)	127, 861, 2042, 2284
VspI	ATTAAT	3 cut(s)	114, 2073, 2328
XapI	RAATTY	9 cut(s)	371, 470, 629, 1154, 1438, 1512, 1960, 2363, 2653
XceI	RCATGY	3 cut(s)	1262, 2123, 2347
XcmI	CCANNNNNNNNNTGG	2 cut(s)	146, 492
XmiI	GTMKAC	2 cut(s)	1090, 1764
XspI	CTAG	5 cut(s)	350, 1151, 1316, 1484, 1586
Zsp2I	ATGCAT	1 cut(s)	399

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.