Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr6

Orthogroup ID

OG0001301

Physical Location & Seq

Genomic Coordinates Forward (+)

17455732 .. 17461045

Gene Structure 5314 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom06g12310.13

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2010 bp

ATGACGGTTGAAGCTAATTGCTTGAGGCTTCTTTTGGTTATGGTACTGCTAGTTCAAGTGTTTCTACGTGGGGAGTCCAAGTACATGGTTTACAATACGACGTCGCGCCTTGTTCCCGGGAAGCTCAACGTTCATTTAGTACCTCACACCCACGACGACGTCGGATGGAAGAAGACCGTTGATCAGTACTATACTGGCTCCAACAATTCCCTTCAGGTAGCTTGTGTTCGGATGGTGCTGGATTCGTTGGTTCCCGCTTTGTTGGCCGATGAAAACCGCAAATTCATATATGTTGAACAGATTTTTTTCCAACGTTGGTGGAGAGACCAAACGGAGGCGACCCAAAACACGGTCAAGCAACTAGTCAGCTCCGGTCAACTGGAACTCATAAATGGGGGGATGTGCATGCATGATGAGGCTGCTGCTCATTACATCGATATGATTGATCAGACGACTCTCGGGCATCGGTTTATCAAGCAAGAGTTCAATGTGACTCCCAGAATTGGCTGGCAGATCGATCCATTCGGACATTCTGCAGTGCAGGCCTACCTGTTGGGAGCTGAGGTTGGATTTGACTCTCTTTTCTTTGCGCGAATTGACTACCAAGACAGAGCTAAACGGAAGAATGAGAAAAGCCTCGAGGTTGTCTGGCGAGGTTCTAAGAGTCTCGGATCATCTGCACAGATTTTCGCCGGTGCATTCCCTGAGAATTATGGACCTCCGACAAATGATTTTTACTTTGAAGTTGATGACTTTTCCCCTATTGTTCAGGATGATACTGATCTGTCTGACTACAATGTGCTCGAGCGTGTAAATGATTTCGTATCTGCTGCAATCTCACAAGCAAACATTACTCGTACGAATCATATCATGTGGACAATGGGATCGGATTTCAAGTATCAGTACGCGCATTCATGGTTTCTGCAGATGGATAAGTTCATTCATTACGTGAATCAAGATGGGCGTGTGAATGCGCTATACTCAACTCCGTCAATATACACTGATGCCAAACATGCAACAAATGAACCCTGGCCAATCAAGACTGGAGACTTCTTTCCATACGCTGAGAAAGAAAATATTTACTGGACCGGATATTTTACAAGCAGGCCAGCCCTCAAGGGCTATGTTAGAATGATGAGCGGCTACTATTTGGCAGCGAGGCAACTTGAATTTTTTAAGGGAATGAGTAAATCAGGGTCTAAGACAGATTCTCTGGCTGACGCCTTAGCAATCGCTCAACATCACGATGCAGTTAGTGGCACGGAGAGGCAGCATGTGGCCGATGATTATGCAAAACGACTTTCAATAGGCTACAATGAGGCTGAGAAGGTTGTTGCAGAATCGCTTGCTTGCATGACAGAATCCAAACCAAGAGCTGGTTGCGAGAATCTGTCAAGGAAGTTTCAACAGTGTCCACTTCTGAACATTAGCTATTGCCCCCCGTCAGAGGCGGATCTGTCAACCGGGAAATCCCTGGTTATTGTTGTCTATAATTCTCTGGGATGGAAAAGAAAGGATGTCGTAAAGATTCCTGTTATCAATGCAAACGTCGCTGTGAGAGATTCTACAGGAAAAGAAATTGAGTCACAGCTCATACCTCTGCTTAATGCATCCGCGACCATAAGAAATTACCATGTCAAGGCATATCTTGGTAAATCCCTGGGAGATACTCCAAGTTATTGGCTTGCATTTTCAGCAACTGTACCCCCTCTTGGTTTTAGCACTTACGTCATCTCAAGTGCCACACGAAAAGCTACTACTTCAGAGGGACCGACAGTGTACAGGTCAGAAGCAGGTCGAAATGATACAATAGAAGTCGGGCGAGGCAACTTGAGACTTATTTATTCTGGAAATGATGGACAACTTACTAAATATATGAACAGCAGAAGCTTGGTCAAAAAAGGGATAAAACAATCATTTAGCTACTATGCTGGAGATAATGGATATGTCGATTTACAGGGAATGTTTCTATTTTCTGAAGGCCGAGGGAGCGTATGTCTTCCGCCCTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000323 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005764 GO:0005773 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044444 GO:0044464

KEGG Pathways

Metabolic & Signaling

ko00511 map00511

Pfam Domains

Protein Families

Alpha-mann_mid Glyco_hydro_38 Glyco_hydro_38C

Protein Analysis

670

Amino Acids

75.23

Weight (kDa)

6.95

Isoelectric Point (pI)

36.83

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001301)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G13980 AT5G13980 AT5G13980
fragaria_vesca	FvH4_5g09420 FvH4_5g09421 FvH4_6g54272 FvH4_6g54272 FvH4_6g54272 FvH4_6g54272 FvH4_6g54272
malus_domestica	MD06G1131600.v1.1 MD09G1002900.v1.1 MD17G1007000.v1.1
prunus_persica	Prupe.3G313300_v2.0.a1 Prupe.3G313300_v2.0.a1 Prupe.3G313300_v2.0.a1 Prupe.3G313300_v2.0.a1 Prupe.5G142600_v2.0.a1 Prupe.5G142600_v2.0.a1
pyrus_communis	pycom06g12300 pycom06g12310 pycom111g00240 pycom17g00260
rosa_chinensis	RchiOBHm_Chr2g0176471 RchiOBHm_Chr2g0176481 RchiOBHm_Chr7g0188771 RchiOBHm_Chr7g0188781
rosa_laevigata	RLG00000004661 RLG00000004662 RLG00000022416
rosa_multiflora	Rmu_sc0000303.1_g000057 Rmu_sc0003642.1_g000008 Rmu_sc0011904.1_g000012
rosa_roxburghii	Rroxscaffold_2G00076370 Rroxscaffold_3G00266040 Rroxscaffold_3G00266050
rosa_rugosa	Rorug02G0595000 Rorug06G0493700
rosa_samantha	Rh2AG673300 Rh2BG684600 Rh2CG647400 Rh2DG698200 Rh7AG098300 Rh7AG098400 Rh7BG099900 Rh7BG100200 Rh7CG101600 Rh7CG101700 Rh7DG100100 Rh7DG100200
rosa_wichuraiana	Rw0G010390 Rw2G055220 Rw7G008480 Rw7G008490

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	2 cut(s)	104, 162
AbsI	CCTCGAGG	1 cut(s)	638
Acc36I	ACCTGC	1 cut(s)	1784
AccB7I	CCANNNNNTGG	1 cut(s)	1376
AccBSI	CCGCTC	1 cut(s)	1140
AccII	CGCG	4 cut(s)	106, 592, 908, 1616
AciI	CCGC	6 cut(s)	255, 277, 1140, 1451, 1614, 2003
AclI	AACGTT	2 cut(s)	129, 313
AclWI	GGATC	4 cut(s)	512, 679, 892, 1461
AcoI	YGGCCR	3 cut(s)	264, 1031, 1278
AcsI	RAATTY	2 cut(s)	281, 1169
AcuI	CTGAAG	3 cut(s)	197, 1746, 1998
AcyI	GRCGYC	3 cut(s)	101, 159, 1221
AfaI	GTAC	8 cut(s)	45, 83, 141, 188, 859, 905, 1704, 1781
AfiI	CCNNNNNNNGG	7 cut(s)	334, 349, 503, 1376, 1447, 1639, 1712
AgsI	TTSAA	9 cut(s)	11, 56, 296, 487, 743, 895, 1169, 1305, 1406
AhlI	ACTAGT	1 cut(s)	361
AjnI	CCWGG	3 cut(s)	1028, 1473, 1659
Alw21I	GWGCWC	1 cut(s)	804
Alw26I	GTCTC	4 cut(s)	318, 671, 1041, 1828
AlwI	GGATC	4 cut(s)	512, 679, 892, 1461
AlwNI	CAGNNNCTG	1 cut(s)	1700
Ama87I	CYCGRG	4 cut(s)	116, 458, 638, 803
AoxI	GGCC	6 cut(s)	264, 543, 1031, 1106, 1278, 1981
ApeKI	GCWGC	5 cut(s)	419, 422, 830, 1154, 1270
ApoI	RAATTY	2 cut(s)	281, 1169
AspLEI	GCGC	4 cut(s)	108, 592, 910, 976
AspS9I	GGNCC	3 cut(s)	716, 1086, 1769
AsuC2I	CCSGG	3 cut(s)	117, 118, 1465
AvaI	CYCGRG	4 cut(s)	116, 458, 638, 803
AvaII	GGWCC	3 cut(s)	716, 1086, 1769
BalI	TGGCCA	1 cut(s)	1033
BbsI	GAAGAC	2 cut(s)	179, 1991
Bbv12I	GWGCWC	1 cut(s)	804
BbvCI	CCTCAGC	1 cut(s)	561
BbvI	GCAGC	5 cut(s)	406, 409, 817, 1166, 1282
BccI	CCATC	6 cut(s)	159, 226, 922, 953, 1497, 1850
BcgI	CGANNNNNNTGC	2 cut(s)	1271, 1305
BciT130I	CCWGG	3 cut(s)	1030, 1475, 1661
BclI	TGATCA	2 cut(s)	181, 445
BcnI	CCSGG	3 cut(s)	117, 118, 1465
BcoDI	GTCTC	4 cut(s)	318, 671, 1041, 1828
BcuI	ACTAGT	1 cut(s)	361
BfaI	CTAG	2 cut(s)	50, 362
BfmI	CTRYAG	3 cut(s)	534, 923, 1566
BfuAI	ACCTGC	1 cut(s)	1784
BisI	GCNGC	6 cut(s)	420, 423, 831, 1141, 1155, 1271
BlsI	GCNGC	6 cut(s)	421, 424, 832, 1142, 1156, 1272
BmcAI	AGTACT	1 cut(s)	188
Bme1390I	CCNGG	6 cut(s)	117, 118, 1030, 1465, 1475, 1661
Bme18I	GGWCC	3 cut(s)	716, 1086, 1769
BmeT110I	CYCGRG	4 cut(s)	116, 458, 638, 803
BmgT120I	GGNCC	3 cut(s)	716, 1086, 1769
BmiI	GGNNCC	3 cut(s)	199, 252, 1770
BmrFI	CCNGG	6 cut(s)	117, 118, 1030, 1465, 1475, 1661
BmsI	GCATC	4 cut(s)	472, 994, 1237, 1619
BpiI	GAAGAC	2 cut(s)	179, 1991
BpmI	CTGGAG	2 cut(s)	1065, 1953
Bpu10I	CCTNAGC	2 cut(s)	561, 1225
BpuEI	CTTGAG	4 cut(s)	43, 1100, 1720, 1852
BpuMI	CCSGG	3 cut(s)	117, 118, 1465
Bsa29I	ATCGAT	2 cut(s)	435, 516
BsaAI	YACGTR	2 cut(s)	68, 949
BsaBI	GATNNNNATC	1 cut(s)	780
BsaHI	GRCGYC	3 cut(s)	101, 159, 1221
BsaI	GGTCTC	1 cut(s)	318
BsaJI	CCNNGG	6 cut(s)	116, 1028, 1473, 1659, 1660, 1984
BsaWI	WCCGGW	2 cut(s)	371, 1088
BsaXI	ACNNNNNCTCC	5 cut(s)	65, 95, 549, 579, 1981
Bsc4I	CCNNNNNNNGG	7 cut(s)	334, 349, 503, 1376, 1447, 1639, 1712
Bse118I	RCCGGY	1 cut(s)	692
Bse1I	ACTGG	4 cut(s)	199, 384, 1048, 1088
Bse8I	GATNNNNATC	1 cut(s)	780
BseBI	CCWGG	3 cut(s)	1030, 1475, 1661
BseCI	ATCGAT	2 cut(s)	435, 516
BseDI	CCNNGG	6 cut(s)	116, 1028, 1473, 1659, 1660, 1984
BseGI	GGATG	7 cut(s)	170, 237, 405, 778, 1508, 1522, 1610
BseJI	GATNNNNATC	1 cut(s)	780
BseLI	CCNNNNNNNGG	7 cut(s)	334, 349, 503, 1376, 1447, 1639, 1712
BseMII	CTCAG	4 cut(s)	552, 696, 1056, 1314
BseNI	ACTGG	4 cut(s)	199, 384, 1048, 1088
BseXI	GCAGC	5 cut(s)	406, 409, 817, 1166, 1282
BsgI	GTGCAG	2 cut(s)	560, 663
Bsh1236I	CGCG	4 cut(s)	106, 592, 908, 1616
BshFI	GGCC	6 cut(s)	266, 545, 1033, 1108, 1280, 1983
BshVI	ATCGAT	2 cut(s)	435, 516
BsiHKAI	GWGCWC	1 cut(s)	804
BsiHKCI	CYCGRG	4 cut(s)	116, 458, 638, 803
BsiSI	CCGG	5 cut(s)	117, 372, 693, 1089, 1464
BsiWI	CGTACG	1 cut(s)	857
BslFI	GGGAC	1 cut(s)	1782
BslI	CCNNNNNNNGG	7 cut(s)	334, 349, 503, 1376, 1447, 1639, 1712
BsmAI	GTCTC	4 cut(s)	318, 671, 1041, 1828
BsmFI	GGGAC	1 cut(s)	1782
BsmI	GAATGC	3 cut(s)	698, 910, 976
BsnI	GGCC	6 cut(s)	266, 545, 1033, 1108, 1280, 1983
Bso31I	GGTCTC	1 cut(s)	318
BsoBI	CYCGRG	4 cut(s)	116, 458, 638, 803
Bsp1286I	GDGCHC	1 cut(s)	804
Bsp1407I	TGTACA	1 cut(s)	1779
Bsp143I	GATC	8 cut(s)	181, 445, 513, 517, 671, 781, 884, 1453
BspACI	CCGC	6 cut(s)	255, 277, 1140, 1451, 1614, 2003
BspANI	GGCC	6 cut(s)	266, 545, 1033, 1108, 1280, 1983
BspCNI	CTCAG	4 cut(s)	553, 697, 1057, 1315
BspDI	ATCGAT	2 cut(s)	435, 516
BspFNI	CGCG	4 cut(s)	106, 592, 908, 1616
BspLI	GGNNCC	3 cut(s)	199, 252, 1770
BspMAI	CTGCAG	2 cut(s)	538, 927
BspMI	ACCTGC	1 cut(s)	1784
BspPI	GGATC	4 cut(s)	512, 679, 892, 1461
BspTNI	GGTCTC	1 cut(s)	318
BsrBI	CCGCTC	1 cut(s)	1140
BsrFI	RCCGGY	1 cut(s)	692
BsrGI	TGTACA	1 cut(s)	1779
BsrI	ACTGG	4 cut(s)	199, 384, 1048, 1088
BssAI	RCCGGY	1 cut(s)	692
BssECI	CCNNGG	6 cut(s)	116, 1028, 1473, 1659, 1660, 1984
BssMI	GATC	8 cut(s)	181, 445, 513, 517, 671, 781, 884, 1453
BssNI	GRCGYC	3 cut(s)	101, 159, 1221
Bst2UI	CCWGG	3 cut(s)	1030, 1475, 1661
Bst4CI	ACNGT	6 cut(s)	7, 178, 352, 1410, 1702, 1777
BstACI	GRCGYC	3 cut(s)	101, 159, 1221
BstAUI	TGTACA	1 cut(s)	1779
BstBAI	YACGTR	2 cut(s)	68, 949
BstC8I	GCNNGC	8 cut(s)	407, 509, 543, 1106, 1110, 1347, 1351, 1686
BstDEI	CTNAG	7 cut(s)	561, 660, 705, 1065, 1200, 1225, 1323
BstF5I	GGATG	7 cut(s)	170, 237, 405, 778, 1508, 1522, 1610
BstFNI	CGCG	4 cut(s)	106, 592, 908, 1616
BstHHI	GCGC	4 cut(s)	108, 592, 910, 976
BstKTI	GATC	8 cut(s)	184, 448, 516, 520, 674, 784, 887, 1456
BstMAI	GTCTC	4 cut(s)	318, 671, 1041, 1828
BstMBI	GATC	8 cut(s)	181, 445, 513, 517, 671, 781, 884, 1453
BstMWI	GCNNNNNNNGC	6 cut(s)	263, 542, 1013, 1550, 1694, 1989
BstNI	CCWGG	3 cut(s)	1030, 1475, 1661
BstNSI	RCATGY	3 cut(s)	409, 1016, 1277
BstSCI	CCNGG	6 cut(s)	115, 116, 1028, 1463, 1473, 1659
BstSFI	CTRYAG	3 cut(s)	534, 923, 1566
BstUI	CGCG	4 cut(s)	106, 592, 908, 1616
BstV1I	GCAGC	5 cut(s)	406, 409, 817, 1166, 1282
BstV2I	GAAGAC	2 cut(s)	179, 1991
BstX2I	RGATCY	1 cut(s)	1453
BstXI	CCANNNNNNTGG	2 cut(s)	85, 1680
BstYI	RGATCY	1 cut(s)	1453
Bsu15I	ATCGAT	2 cut(s)	435, 516
BsuRI	GGCC	6 cut(s)	266, 545, 1033, 1108, 1280, 1983
BsuTUI	ATCGAT	2 cut(s)	435, 516
BtsCI	GGATG	7 cut(s)	170, 237, 405, 778, 1508, 1522, 1610
BtsI	GCAGTG	1 cut(s)	543
BtsIMutI	CAGTG	4 cut(s)	543, 999, 1415, 1782
BveI	ACCTGC	1 cut(s)	1784
Cac8I	GCNNGC	8 cut(s)	407, 509, 543, 1106, 1110, 1347, 1351, 1686
CaiI	CAGNNNCTG	1 cut(s)	1700
CfoI	GCGC	4 cut(s)	108, 592, 910, 976
Cfr10I	RCCGGY	1 cut(s)	692
Cfr13I	GGNCC	3 cut(s)	716, 1086, 1769
Cfr9I	CCCGGG	1 cut(s)	116
ClaI	ATCGAT	2 cut(s)	435, 516
CseI	GACGC	1 cut(s)	1229
Csp6I	GTAC	8 cut(s)	44, 82, 140, 187, 858, 904, 1703, 1780
CspCI	CAANNNNNGTGG	2 cut(s)	299, 334
CviAII	CATG	9 cut(s)	85, 406, 410, 871, 915, 1013, 1274, 1354, 1634
CviQI	GTAC	8 cut(s)	44, 82, 140, 187, 858, 904, 1703, 1780
DdeI	CTNAG	7 cut(s)	561, 660, 705, 1065, 1200, 1225, 1323
DpnI	GATC	8 cut(s)	183, 447, 515, 519, 673, 783, 886, 1455
DpnII	GATC	8 cut(s)	181, 445, 513, 517, 671, 781, 884, 1453
EaeI	YGGCCR	3 cut(s)	264, 1031, 1278
EciI	GGCGGA	2 cut(s)	1466, 1992
Eco147I	AGGCCT	1 cut(s)	545
Eco31I	GGTCTC	1 cut(s)	318
Eco47I	GGWCC	3 cut(s)	716, 1086, 1769
Eco57I	CTGAAG	3 cut(s)	197, 1746, 1998
Eco88I	CYCGRG	4 cut(s)	116, 458, 638, 803
EcoRII	CCWGG	3 cut(s)	1028, 1473, 1659
EcoT22I	ATGCAT	2 cut(s)	411, 1612
FaeI	CATG	9 cut(s)	88, 409, 413, 874, 918, 1016, 1277, 1357, 1637
FaqI	GGGAC	1 cut(s)	1782
FatI	CATG	9 cut(s)	84, 405, 409, 870, 914, 1012, 1273, 1353, 1633
FauI	CCCGC	1 cut(s)	262
FbaI	TGATCA	2 cut(s)	181, 445
Fnu4HI	GCNGC	6 cut(s)	420, 423, 831, 1141, 1155, 1271
FokI	GGATG	7 cut(s)	177, 244, 412, 785, 1515, 1529, 1597
Fsp4HI	GCNGC	6 cut(s)	420, 423, 831, 1141, 1155, 1271
FspBI	CTAG	2 cut(s)	50, 362
GlaI	GCGC	4 cut(s)	107, 591, 909, 975
GluI	GCNGC	6 cut(s)	420, 423, 831, 1141, 1155, 1271
GsuI	CTGGAG	2 cut(s)	1065, 1953
HaeIII	GGCC	6 cut(s)	266, 545, 1033, 1108, 1280, 1983
HapII	CCGG	5 cut(s)	117, 372, 693, 1089, 1464
HgaI	GACGC	1 cut(s)	1229
HhaI	GCGC	4 cut(s)	108, 592, 910, 976
Hin1I	GRCGYC	3 cut(s)	101, 159, 1221
Hin1II	CATG	9 cut(s)	88, 409, 413, 874, 918, 1016, 1277, 1357, 1637
Hin6I	GCGC	4 cut(s)	106, 590, 908, 974
HinP1I	GCGC	4 cut(s)	106, 590, 908, 974
HincII	GTYRAC	2 cut(s)	377, 1461
HindII	GTYRAC	2 cut(s)	377, 1461
HindIII	AAGCTT	1 cut(s)	1888
HpaII	CCGG	5 cut(s)	117, 372, 693, 1089, 1464
Hpy166II	GTNNAC	6 cut(s)	91, 377, 876, 1415, 1461, 1780
Hpy188III	TCNNGA	5 cut(s)	770, 956, 1039, 1244, 1848
Hpy8I	GTNNAC	6 cut(s)	91, 377, 876, 1415, 1461, 1780
Hpy99I	CGWCG	6 cut(s)	103, 106, 158, 161, 164, 1553
HpyAV	CCTTC	3 cut(s)	221, 1321, 1973
HpyCH4III	ACNGT	6 cut(s)	7, 178, 352, 1410, 1702, 1777
HpyCH4IV	ACGT	8 cut(s)	67, 101, 129, 159, 313, 948, 1548, 1728
HpyF10VI	GCNNNNNNNGC	6 cut(s)	263, 542, 1013, 1550, 1694, 1989
HpyF3I	CTNAG	7 cut(s)	561, 660, 705, 1065, 1200, 1225, 1323
HpySE526I	ACGT	8 cut(s)	67, 101, 129, 159, 313, 948, 1548, 1728
Hsp92I	GRCGYC	3 cut(s)	101, 159, 1221
Hsp92II	CATG	9 cut(s)	88, 409, 413, 874, 918, 1016, 1277, 1357, 1637
HspAI	GCGC	4 cut(s)	106, 590, 908, 974
Ksp22I	TGATCA	2 cut(s)	181, 445
Kzo9I	GATC	8 cut(s)	181, 445, 513, 517, 671, 781, 884, 1453
LmnI	GCTCC	4 cut(s)	203, 374, 557, 1989
Lsp1109I	GCAGC	5 cut(s)	406, 409, 817, 1166, 1282
LweI	GCATC	4 cut(s)	472, 994, 1237, 1619
MaeI	CTAG	2 cut(s)	50, 362
MaeII	ACGT	8 cut(s)	67, 101, 129, 159, 313, 948, 1548, 1728
MaeIII	GTNAC	2 cut(s)	490, 1584
MalI	GATC	8 cut(s)	183, 447, 515, 519, 673, 783, 886, 1455
MbiI	CCGCTC	1 cut(s)	1140
MboI	GATC	8 cut(s)	181, 445, 513, 517, 671, 781, 884, 1453
MboII	GAAGA	4 cut(s)	181, 184, 634, 1991
MflI	RGATCY	1 cut(s)	1453
MhlI	GDGCHC	1 cut(s)	804
MlsI	TGGCCA	1 cut(s)	1033
MluNI	TGGCCA	1 cut(s)	1033
MlyI	GAGTC	6 cut(s)	83, 448, 487, 569, 673, 1592
MmeI	TCCRAC	5 cut(s)	142, 225, 334, 547, 746
Mox20I	TGGCCA	1 cut(s)	1033
Mph1103I	ATGCAT	2 cut(s)	411, 1612
MscI	TGGCCA	1 cut(s)	1033
MseI	TTAA	2 cut(s)	1176, 1605
MslI	CAYNNNNRTG	2 cut(s)	437, 1245
Msp20I	TGGCCA	1 cut(s)	1033
MspI	CCGG	5 cut(s)	117, 372, 693, 1089, 1464
MspR9I	CCNGG	6 cut(s)	117, 118, 1030, 1465, 1475, 1661
Mva1269I	GAATGC	3 cut(s)	698, 910, 976
MvaI	CCWGG	3 cut(s)	1030, 1475, 1661
MvnI	CGCG	4 cut(s)	106, 592, 908, 1616
MwoI	GCNNNNNNNGC	6 cut(s)	263, 542, 1013, 1550, 1694, 1989
NciI	CCSGG	3 cut(s)	117, 118, 1465
NdeII	GATC	8 cut(s)	181, 445, 513, 517, 671, 781, 884, 1453
NlaIII	CATG	9 cut(s)	88, 409, 413, 874, 918, 1016, 1277, 1357, 1637
NlaIV	GGNNCC	3 cut(s)	199, 252, 1770
NmeAIII	GCCGAG	1 cut(s)	2009
NmuCI	GTSAC	2 cut(s)	490, 1584
NsiI	ATGCAT	2 cut(s)	411, 1612
NspI	RCATGY	3 cut(s)	409, 1016, 1277
PaeI	GCATGC	1 cut(s)	409
PaeR7I	CTCGAG	2 cut(s)	638, 803
PasI	CCCWGGG	1 cut(s)	1660
PceI	AGGCCT	1 cut(s)	545
PctI	GAATGC	3 cut(s)	698, 910, 976
PfeI	GAWTC	9 cut(s)	242, 862, 952, 1208, 1340, 1361, 1387, 1528, 1562
Pfl23II	CGTACG	1 cut(s)	857
PflFI	GACNNNGTC	1 cut(s)	158
PflMI	CCANNNNNTGG	1 cut(s)	1376
PkrI	GCNGC	6 cut(s)	421, 424, 832, 1142, 1156, 1272
PleI	GAGTC	6 cut(s)	82, 448, 487, 569, 672, 1591
PpsI	GAGTC	6 cut(s)	82, 448, 487, 569, 672, 1591
Ppu21I	YACGTR	2 cut(s)	68, 949
Psp1406I	AACGTT	2 cut(s)	129, 313
Psp6I	CCWGG	3 cut(s)	1028, 1473, 1659
PspGI	CCWGG	3 cut(s)	1028, 1473, 1659
PspLI	CGTACG	1 cut(s)	857
PspN4I	GGNNCC	3 cut(s)	199, 252, 1770
PspPI	GGNCC	3 cut(s)	716, 1086, 1769
PspXI	VCTCGAGB	2 cut(s)	638, 803
PsrI	GAACNNNNNNTAC	4 cut(s)	36, 68, 210, 242
PstI	CTGCAG	2 cut(s)	538, 927
PstNI	CAGNNNCTG	1 cut(s)	1700
PsuI	RGATCY	1 cut(s)	1453
PsyI	GACNNNGTC	1 cut(s)	158
RsaI	GTAC	8 cut(s)	45, 83, 141, 188, 859, 905, 1704, 1781
RsaNI	GTAC	8 cut(s)	44, 82, 140, 187, 858, 904, 1703, 1780
RseI	CAYNNNNRTG	2 cut(s)	437, 1245
SaqAI	TTAA	2 cut(s)	1176, 1605
SatI	GCNGC	6 cut(s)	420, 423, 831, 1141, 1155, 1271
Sau3AI	GATC	8 cut(s)	181, 445, 513, 517, 671, 781, 884, 1453
Sau96I	GGNCC	3 cut(s)	716, 1086, 1769
ScaI	AGTACT	1 cut(s)	188
SchI	GAGTC	6 cut(s)	83, 448, 487, 569, 673, 1592
ScrFI	CCNGG	6 cut(s)	117, 118, 1030, 1465, 1475, 1661
SduI	GDGCHC	1 cut(s)	804
SfaNI	GCATC	4 cut(s)	472, 994, 1237, 1619
SfcI	CTRYAG	3 cut(s)	534, 923, 1566
Sfr274I	CTCGAG	2 cut(s)	638, 803
SgrAI	CRCCGGYG	1 cut(s)	692
SinI	GGWCC	3 cut(s)	716, 1086, 1769
SlaI	CTCGAG	2 cut(s)	638, 803
SmaI	CCCGGG	1 cut(s)	118
SmiMI	CAYNNNNRTG	2 cut(s)	437, 1245
SmlI	CTYRAG	6 cut(s)	22, 638, 803, 1115, 1735, 1831
SmoI	CTYRAG	6 cut(s)	22, 638, 803, 1115, 1735, 1831
SpeI	ACTAGT	1 cut(s)	361
SphI	GCATGC	1 cut(s)	409
SseBI	AGGCCT	1 cut(s)	545
SsiI	CCGC	6 cut(s)	255, 277, 1140, 1451, 1614, 2003
SspI	AATATT	1 cut(s)	1078
SspMI	CTAG	2 cut(s)	50, 362
StuI	AGGCCT	1 cut(s)	545
StyD4I	CCNGG	6 cut(s)	115, 116, 1028, 1463, 1473, 1659
TaaI	ACNGT	6 cut(s)	7, 178, 352, 1410, 1702, 1777
TaiI	ACGT	8 cut(s)	70, 104, 132, 162, 316, 951, 1551, 1731
TaqI	TCGA	6 cut(s)	435, 516, 639, 804, 1798, 1950
TaqII	GACCGA	1 cut(s)	1786
TatI	WGTACW	3 cut(s)	81, 186, 1779
TauI	GCSGC	1 cut(s)	1143
TfiI	GAWTC	9 cut(s)	242, 862, 952, 1208, 1340, 1361, 1387, 1528, 1562
Tru1I	TTAA	2 cut(s)	1176, 1605
Tru9I	TTAA	2 cut(s)	1176, 1605
TscAI	CASTG	4 cut(s)	543, 1006, 1415, 1782
TseFI	GTSAC	2 cut(s)	490, 1584
TseI	GCWGC	5 cut(s)	419, 422, 830, 1154, 1270
Tsp45I	GTSAC	2 cut(s)	490, 1584
TspDTI	ATGAA	8 cut(s)	122, 274, 285, 903, 928, 932, 1038, 1892
TspGWI	ACGGA	4 cut(s)	347, 634, 978, 1277
TspMI	CCCGGG	1 cut(s)	116
TspRI	CASTG	4 cut(s)	543, 1006, 1415, 1782
Tth111I	GACNNNGTC	1 cut(s)	158
Van91I	CCANNNNNTGG	1 cut(s)	1376
VpaK11BI	GGWCC	3 cut(s)	716, 1086, 1769
XapI	RAATTY	2 cut(s)	281, 1169
XceI	RCATGY	3 cut(s)	409, 1016, 1277
XhoI	CTCGAG	2 cut(s)	638, 803
XmaI	CCCGGG	1 cut(s)	116
XspI	CTAG	2 cut(s)	50, 362
ZraI	GACGTC	2 cut(s)	102, 160
ZrmI	AGTACT	1 cut(s)	188
Zsp2I	ATGCAT	2 cut(s)	411, 1612

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.