Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0011904.1

Orthogroup ID

OG0001301

Physical Location & Seq

Genomic Coordinates Forward (+)

38391 .. 47060

Gene Structure 8670 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0011904.1_g000012.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2880 bp

atggcgaccacgactcctcgtttactcttcttcttcttctgtgtgcttttctcggtcggggggattctagtcgccgactccaaatttatggtctataacacctcccaagggatagtcgccggtaaacttaacgtccacttggtccctcacacccacgacgacgtcggatggttgaagaccgttgatcagtattatgttggctccaacaattccatccagggggcttgtgtgcaaaatgtgttggactctctgattcctgctctgttggctgacaagaatcggaaattcatctacgttgaaattgcctttttccagcgctggtggagagatcagagtgatgccgtccagcgtatagtcacggaccttgtcagctcgggtcaactagaattcataaatgggggcatgtgtatgcatgatgaagctgctacgcattatgttgacatgattgatcagaccactcttgggcatcgctttattaaaacggaattcgatgtgactccaagaattggatggcaaattgatccttttggacattcggctgtccaggcctacttgttgggagcacaagttggattcgactcactttactttggtcgaatagattaccaggacagggaaaaacgcaaaaatgacaagagtcttgagtttgtttggcagggttctaagagtctcggttcatctgctgagattttttctggtgctttccctgagaattatgaacctccttctggtttctattttgaagttaatgataaatccccaatagtccaggatgacatcactttgtttgattacaatgttcaagaacgagttaatgactttgttgctgctgcagtatcacaggctaacataactcgaacaaatcatattatgtggaccatgggaacagacttcaagtatcagtatgcacacacctggttccgtcaaatggacaagctcattcattatgtcaacaaggatggacgtgttaatgctctgtactctactccttccatatatactgatgcaaaatatgctacaaatgaatcttggccaatcaagactggtgacttctttccttatgcagatcgcattaatgcttactggacaggatacttcacaagcagaccagccttgaaacactacgttagaacaatgagtggctattatttggctgctaggcaactagaattttttaaaggaaggagtacttcagggcccaatacggactcattggcagatgccttagcaattgctcaacatcatgatgctgtcactggtacagaaaagcagcacgttgccaatgattatgcaaaaagattgtcaataggatacatggagtctgagcaactagttgcaacttcacttgctcacttggttgagtctgcatcatatactggatctggaaacccaactacaaagtttcaacagtgtctacttctgaatataagctattgccctgcatcagaagtaactttgtctcaggggaaaaaattgattgtcgtggtgtacaattctcttggatggaagagggatgacacagtccgaattcctgttatcaatgaagatgtcattgttcatgattctgagggaaaagcaatcgagtcacagcttcttcctctagatgatgtccatctgggcttaaggaactactatgttaaggcatacttgggtcaaactccaacaaagacaccaaagtattggcttgtgtttacagtatccgtaccaccacttggttttagcacatacactatctcgggtgccgaaggggcaggtgctagctcaaccagatcatctgtatacacctttcaaagcagagaaaagtcgactattgaagttggtcaaggaaatgtgaaactctctttttccacagatcaaggcaaaatgactaattatgtcaatagcagaagcttggtggaagaatcggttcagcagtcttacagcttttataatgggtataatggcagtaatgataaggctccgctgattcctcagatcactagacttcacaaggaaaaggagcatgttgaagttgagtttattgttggccctatacctactgatgacggaattggaaaagaagttgtaactcaattagacactgccatggctaccaacaaaacgttctacactgattctaatgggcgtgattttatcaaaaggattcgcgactatagaacagattgggacttcaaagtgaaccaacctgttgctggaaattattacccagtatgtttgagactactacttgatgactcgagaggtgttgccgaggctctaaatgaaactgtctgtgtttccgatgaatgcacaggactaagagtcctagggaaattttacttcagaattgaccccttgggagatggtgctaagtggcgtcgttcttttggccaggagatatattcacctcttctcctagcctttgctgaacaggatggagataactggaagaattctcatgcaaccactttttctgggattgattcctcgtatagtttacctgataatgttgctcttataactcttcaggagcttgatgatggaaaaattctcattcgcttagcacatttatacgaggttggagaggacaaggaggacaaggatttttctgtaatggcaaatgtagagctgaagaagcttttccccaggaagaagattggcaaagcgacagaaatgaacttatcagctaatcaagaaaggacagaaatggagagaaagagactggtatggaaaaaggaagggggctcgtcaggaacggaaaagggtgtgaggggtggacctgttgatcctgcaaaactagttgtggaacttgccccaatggaaatccgcacctttctcattgacttggagcagaagttcttccaccgccgccatcatcatcatgatgtatctgatgtataa

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000323 GO:0001775 GO:0002252 GO:0002263 GO:0002274 GO:0002275 GO:0002283 GO:0002366 GO:0002376 GO:0002443 GO:0002444 GO:0002446 GO:0003674 GO:0003824 GO:0004553 GO:0004559 GO:0005575 GO:0005576 GO:0005615 GO:0005622 GO:0005623 GO:0005737 GO:0005764 GO:0005766 GO:0005773 GO:0005775 GO:0005975 GO:0005996 GO:0006013 GO:0006464 GO:0006517 GO:0006807 GO:0006810 GO:0006887 GO:0006955 GO:0008150 GO:0008152 GO:0009056 GO:0009100 GO:0009311 GO:0009313 GO:0009987 GO:0012505 GO:0015923 GO:0016052 GO:0016192 GO:0016787 GO:0016798 GO:0019318 GO:0019538 GO:0030141 GO:0031410 GO:0031974 GO:0031982 GO:0031983 GO:0032940 GO:0034774 GO:0035578 GO:0036211 GO:0036230 GO:0042119 GO:0042582 GO:0043170 GO:0043202 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0043299 GO:0043312 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044281 GO:0044421 GO:0044422 GO:0044424 GO:0044433 GO:0044437 GO:0044444 GO:0044446 GO:0044464 GO:0045055 GO:0045321 GO:0046903 GO:0050896 GO:0051179 GO:0051234 GO:0060205 GO:0070013 GO:0071704 GO:0097708 GO:0099503 GO:1901135 GO:1901564 GO:1901575

KEGG Pathways

Metabolic & Signaling

ko00511 map00511

Pfam Domains

Protein Families

Alpha-mann_mid Glyco_hydro_38 Glyco_hydro_38C

Protein Analysis

959

Amino Acids

108.23

Weight (kDa)

5.94

Isoelectric Point (pI)

36.16

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001301)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G13980 AT5G13980 AT5G13980
fragaria_vesca	FvH4_5g09420 FvH4_5g09421 FvH4_6g54272 FvH4_6g54272 FvH4_6g54272 FvH4_6g54272 FvH4_6g54272
malus_domestica	MD06G1131600.v1.1 MD09G1002900.v1.1 MD17G1007000.v1.1
prunus_persica	Prupe.3G313300_v2.0.a1 Prupe.3G313300_v2.0.a1 Prupe.3G313300_v2.0.a1 Prupe.3G313300_v2.0.a1 Prupe.5G142600_v2.0.a1 Prupe.5G142600_v2.0.a1
pyrus_communis	pycom06g12300 pycom06g12310 pycom111g00240 pycom17g00260
rosa_chinensis	RchiOBHm_Chr2g0176471 RchiOBHm_Chr2g0176481 RchiOBHm_Chr7g0188771 RchiOBHm_Chr7g0188781
rosa_laevigata	RLG00000004661 RLG00000004662 RLG00000022416
rosa_multiflora	Rmu_sc0000303.1_g000057 Rmu_sc0003642.1_g000008 Rmu_sc0011904.1_g000012
rosa_roxburghii	Rroxscaffold_2G00076370 Rroxscaffold_3G00266040 Rroxscaffold_3G00266050
rosa_rugosa	Rorug02G0595000 Rorug06G0493700
rosa_samantha	Rh2AG673300 Rh2BG684600 Rh2CG647400 Rh2DG698200 Rh7AG098300 Rh7AG098400 Rh7BG099900 Rh7BG100200 Rh7CG101600 Rh7CG101700 Rh7DG100100 Rh7DG100200
rosa_wichuraiana	Rw0G010390 Rw2G055220 Rw7G008480 Rw7G008490

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	1929, 2498
AarI	CACCTGC	1 cut(s)	1742
AatII	GACGTC	1 cut(s)	165
Acc36I	ACCTGC	1 cut(s)	1742
AccB1I	GGYRCC	1 cut(s)	1739
AccB7I	CCANNNNNTGG	2 cut(s)	506, 1712
AccI	GTMKAC	3 cut(s)	1414, 1779, 1805
AccII	CGCG	1 cut(s)	2148
AciI	CCGC	4 cut(s)	1961, 2806, 2845, 2848
AclI	AACGTT	1 cut(s)	2102
AclWI	GGATC	3 cut(s)	515, 1387, 2759
AcoI	YGGCCR	2 cut(s)	1031, 2368
AcsI	RAATTY	9 cut(s)	83, 284, 386, 485, 1169, 1527, 2312, 2431, 2526
AcuI	CTGAAG	4 cut(s)	1176, 2305, 2489, 2630
AcyI	GRCGYC	2 cut(s)	162, 2356
AfaI	GTAC	5 cut(s)	980, 1189, 1261, 1490, 1704
AfeI	AGCGCT	1 cut(s)	317
AfiI	CCNNNNNNNGG	9 cut(s)	108, 219, 462, 506, 613, 728, 928, 1712, 2192
AflII	CTTAAG	1 cut(s)	1621
AflIII	ACRYGT	1 cut(s)	964
AhdI	GACNNNNNGTC	1 cut(s)	2300
AhlI	ACTAGT	2 cut(s)	1330, 2776
AjiI	CACGTC	1 cut(s)	965
AjnI	CCWGG	7 cut(s)	216, 543, 606, 768, 914, 2370, 2624
AjuI	GAANNNNNNNTTGG	2 cut(s)	2087, 2119
AloI	GAACNNNNNNTCC	2 cut(s)	2819, 2851
Alw21I	GWGCWC	1 cut(s)	565
Alw26I	GTCTC	4 cut(s)	674, 1464, 2212, 2692
AlwI	GGATC	3 cut(s)	515, 1387, 2759
Ama87I	CYCGRG	3 cut(s)	373, 1735, 2236
Aor51HI	AGCGCT	1 cut(s)	317
AoxI	GGCC	5 cut(s)	546, 1031, 1196, 2026, 2368
ApaI	GGGCCC	1 cut(s)	1200
ApeKI	GCWGC	5 cut(s)	422, 827, 830, 1154, 1270
ApoI	RAATTY	9 cut(s)	83, 284, 386, 485, 1169, 1527, 2312, 2431, 2526
ArsI	GACNNNNNNTTYG	4 cut(s)	75, 107, 1286, 1318
AseI	ATTAAT	1 cut(s)	1074
Asp700I	GAANNNNTTC	3 cut(s)	1905, 2618, 2837
AspA2I	CCTAGG	1 cut(s)	2305
AspLEI	GCGC	1 cut(s)	318
AspS9I	GGNCC	7 cut(s)	142, 361, 876, 1196, 1197, 2027, 2756
AsuHPI	GGTGA	2 cut(s)	1058, 2376
AsuNHI	GCTAGC	1 cut(s)	1757
AvaI	CYCGRG	3 cut(s)	373, 1735, 2236
AvaII	GGWCC	4 cut(s)	142, 361, 876, 2756
AvrII	CCTAGG	1 cut(s)	2305
BaeGI	GKGCMC	1 cut(s)	1200
BalI	TGGCCA	2 cut(s)	1033, 2370
BanI	GGYRCC	1 cut(s)	1739
BanII	GRGCYC	2 cut(s)	1200, 2726
BbsI	GAAGAC	1 cut(s)	182
Bbv12I	GWGCWC	1 cut(s)	565
BbvI	GCAGC	5 cut(s)	409, 814, 817, 1141, 1282
BceAI	ACGGC	1 cut(s)	326
BciT130I	CCWGG	7 cut(s)	218, 545, 608, 770, 916, 2372, 2626
BciVI	GTATCC	3 cut(s)	1085, 1304, 1708
BclI	TGATCA	2 cut(s)	184, 448
BcoDI	GTCTC	4 cut(s)	674, 1464, 2212, 2692
BcuI	ACTAGT	2 cut(s)	1330, 2776
BfmI	CTRYAG	2 cut(s)	831, 2152
BfoI	RGCGCY	1 cut(s)	319
BfrI	CTTAAG	1 cut(s)	1621
BfuAI	ACCTGC	1 cut(s)	1742
BfuI	GTATCC	3 cut(s)	1085, 1304, 1708
BglI	GCCNNNNNGGC	1 cut(s)	1748
BisI	GCNGC	6 cut(s)	423, 828, 831, 1155, 1271, 2848
BlnI	CCTAGG	1 cut(s)	2305
BlpI	GCTNAGC	1 cut(s)	2539
BlsI	GCNGC	6 cut(s)	424, 829, 832, 1156, 1272, 2849
BmcAI	AGTACT	1 cut(s)	1189
Bme1390I	CCNGG	7 cut(s)	218, 545, 608, 770, 916, 2372, 2626
Bme18I	GGWCC	4 cut(s)	142, 361, 876, 2756
BmeRI	GACNNNNNGTC	1 cut(s)	2300
BmeT110I	CYCGRG	3 cut(s)	373, 1735, 2236
BmgBI	CACGTC	1 cut(s)	965
BmgT120I	GGNCC	7 cut(s)	142, 361, 876, 1196, 1197, 2027, 2756
BmiI	GGNNCC	6 cut(s)	144, 202, 920, 1198, 1741, 1959
BmrFI	CCNGG	7 cut(s)	218, 545, 608, 770, 916, 2372, 2626
BmrI	ACTGGG	1 cut(s)	2201
BmsI	GCATC	7 cut(s)	328, 475, 994, 1210, 1237, 1376, 1451
BmtI	GCTAGC	1 cut(s)	1761
BmuI	ACTGGG	1 cut(s)	2201
BoxI	GACNNNNGTC	1 cut(s)	636
BpiI	GAAGAC	1 cut(s)	182
Bpu10I	CCTNAGC	1 cut(s)	1225
Bpu1102I	GCTNAGC	1 cut(s)	2539
BpuEI	CTTGAG	1 cut(s)	662
BsaBI	GATNNNNATC	1 cut(s)	1611
BsaHI	GRCGYC	2 cut(s)	162, 2356
BsaJI	CCNNGG	8 cut(s)	106, 217, 879, 2085, 2250, 2305, 2334, 2624
BsaXI	ACNNNNNCTCC	7 cut(s)	28, 552, 582, 2376, 2406, 2819, 2849
Bsc4I	CCNNNNNNNGG	9 cut(s)	108, 219, 462, 506, 613, 728, 928, 1712, 2192
Bse118I	RCCGGY	1 cut(s)	119
Bse1I	ACTGG	7 cut(s)	1048, 1088, 1261, 1381, 2207, 2429, 2706
Bse8I	GATNNNNATC	1 cut(s)	1611
BseBI	CCWGG	7 cut(s)	218, 545, 608, 770, 916, 2372, 2626
BseDI	CCNNGG	8 cut(s)	106, 217, 879, 2085, 2250, 2305, 2334, 2624
BseGI	GGATG	8 cut(s)	173, 213, 515, 778, 964, 1508, 1519, 2419
BseJI	GATNNNNATC	1 cut(s)	1611
BseLI	CCNNNNNNNGG	9 cut(s)	108, 219, 462, 506, 613, 728, 928, 1712, 2192
BseMII	CTCAG	6 cut(s)	675, 699, 1314, 1475, 1557, 1985
BseNI	ACTGG	7 cut(s)	1048, 1088, 1261, 1381, 2207, 2429, 2706
BseRI	GAGGAG	1 cut(s)	6
BseSI	GKGCMC	1 cut(s)	1200
BseXI	GCAGC	5 cut(s)	409, 814, 817, 1141, 1282
Bsh1236I	CGCG	1 cut(s)	2148
Bsh1285I	CGRYCG	1 cut(s)	57
BshFI	GGCC	5 cut(s)	548, 1033, 1198, 2028, 2370
BshNI	GGYRCC	1 cut(s)	1739
BsiEI	CGRYCG	1 cut(s)	57
BsiHKAI	GWGCWC	1 cut(s)	565
BsiHKCI	CYCGRG	3 cut(s)	373, 1735, 2236
BsiSI	CCGG	1 cut(s)	120
BslFI	GGGAC	2 cut(s)	128, 2180
BslI	CCNNNNNNNGG	9 cut(s)	108, 219, 462, 506, 613, 728, 928, 1712, 2192
BsmAI	GTCTC	4 cut(s)	674, 1464, 2212, 2692
BsmFI	GGGAC	2 cut(s)	128, 2180
BsmI	GAATGC	1 cut(s)	2291
BsnI	GGCC	5 cut(s)	548, 1033, 1198, 2028, 2370
BsoBI	CYCGRG	3 cut(s)	373, 1735, 2236
Bsp120I	GGGCCC	1 cut(s)	1196
Bsp1286I	GDGCHC	3 cut(s)	565, 1200, 2726
Bsp1407I	TGTACA	1 cut(s)	1488
Bsp1720I	GCTNAGC	1 cut(s)	2539
Bsp19I	CCATGG	2 cut(s)	879, 2085
Bsp68I	TCGCGA	1 cut(s)	2148
BspACI	CCGC	4 cut(s)	1961, 2806, 2845, 2848
BspANI	GGCC	5 cut(s)	548, 1033, 1198, 2028, 2370
BspCNI	CTCAG	6 cut(s)	676, 700, 1315, 1474, 1558, 1984
BspFNI	CGCG	1 cut(s)	2148
BspHI	TCATGA	3 cut(s)	1243, 1558, 2860
BspLI	GGNNCC	6 cut(s)	144, 202, 920, 1198, 1741, 1959
BspMAI	CTGCAG	1 cut(s)	835
BspMI	ACCTGC	1 cut(s)	1742
BspOI	GCTAGC	1 cut(s)	1761
BspPI	GGATC	3 cut(s)	515, 1387, 2759
BspT107I	GGYRCC	1 cut(s)	1739
BspTI	CTTAAG	1 cut(s)	1621
BsrFI	RCCGGY	1 cut(s)	119
BsrGI	TGTACA	1 cut(s)	1488
BsrI	ACTGG	7 cut(s)	1048, 1088, 1261, 1381, 2207, 2429, 2706
BssAI	RCCGGY	1 cut(s)	119
BssECI	CCNNGG	8 cut(s)	106, 217, 879, 2085, 2250, 2305, 2334, 2624
BssNAI	GTATAC	1 cut(s)	1780
BssNI	GRCGYC	2 cut(s)	162, 2356
BssT1I	CCWWGG	5 cut(s)	106, 879, 2085, 2305, 2334
Bst1107I	GTATAC	1 cut(s)	1780
Bst2UI	CCWGG	7 cut(s)	218, 545, 608, 770, 916, 2372, 2626
Bst4CI	ACNGT	5 cut(s)	181, 1410, 1522, 1696, 2269
Bst6I	CTCTTC	4 cut(s)	32, 1502, 2394, 2508
BstACI	GRCGYC	2 cut(s)	162, 2356
BstAFI	CTTAAG	1 cut(s)	1621
BstAPI	GCANNNNNTGC	1 cut(s)	1013
BstAUI	TGTACA	1 cut(s)	1488
BstC8I	GCNNGC	1 cut(s)	1759
BstDSI	CCRYGG	2 cut(s)	879, 2085
BstF5I	GGATG	8 cut(s)	173, 213, 515, 778, 964, 1508, 1519, 2419
BstFNI	CGCG	1 cut(s)	2148
BstH2I	RGCGCY	1 cut(s)	319
BstHHI	GCGC	1 cut(s)	318
BstMAI	GTCTC	4 cut(s)	674, 1464, 2212, 2692
BstMCI	CGRYCG	1 cut(s)	57
BstMWI	GCNNNNNNNGC	5 cut(s)	266, 545, 1013, 1748, 2614
BstNI	CCWGG	7 cut(s)	218, 545, 608, 770, 916, 2372, 2626
BstNSI	RCATGY	2 cut(s)	406, 2006
BstPAI	GACNNNNGTC	1 cut(s)	636
BstSCI	CCNGG	7 cut(s)	216, 543, 606, 768, 914, 2370, 2624
BstSFI	CTRYAG	2 cut(s)	831, 2152
BstSLI	GKGCMC	1 cut(s)	1200
BstUI	CGCG	1 cut(s)	2148
BstV1I	GCAGC	5 cut(s)	409, 814, 817, 1141, 1282
BstV2I	GAAGAC	1 cut(s)	182
BstX2I	RGATCY	1 cut(s)	1379
BstXI	CCANNNNNNTGG	2 cut(s)	88, 1680
BstYI	RGATCY	1 cut(s)	1379
BstZ17I	GTATAC	1 cut(s)	1780
BsuI	GTATCC	3 cut(s)	1085, 1304, 1708
BsuRI	GGCC	5 cut(s)	548, 1033, 1198, 2028, 2370
BtgI	CCRYGG	2 cut(s)	879, 2085
BtgZI	GCGATG	1 cut(s)	452
BtrI	CACGTC	1 cut(s)	965
BtsCI	GGATG	8 cut(s)	173, 213, 515, 778, 964, 1508, 1519, 2419
BtsI	GCAGTG	1 cut(s)	2079
BtsIMutI	CAGTG	4 cut(s)	1254, 1415, 2079, 2109
BtuMI	TCGCGA	1 cut(s)	2148
BveI	ACCTGC	1 cut(s)	1742
Cac8I	GCNNGC	1 cut(s)	1759
CciI	TCATGA	3 cut(s)	1243, 1558, 2860
CfoI	GCGC	1 cut(s)	318
Cfr10I	RCCGGY	1 cut(s)	119
Cfr13I	GGNCC	7 cut(s)	142, 361, 876, 1196, 1197, 2027, 2756
CseI	GACGC	1 cut(s)	2345
CsiI	ACCWGGT	1 cut(s)	914
Csp6I	GTAC	5 cut(s)	979, 1188, 1260, 1489, 1703
CviQI	GTAC	5 cut(s)	979, 1188, 1260, 1489, 1703
DraI	TTTAAA	1 cut(s)	1177
DriI	GACNNNNNGTC	1 cut(s)	2300
EaeI	YGGCCR	2 cut(s)	1031, 2368
Eam1104I	CTCTTC	4 cut(s)	32, 1502, 2394, 2508
Eam1105I	GACNNNNNGTC	1 cut(s)	2300
EarI	CTCTTC	4 cut(s)	32, 1502, 2394, 2508
Eco130I	CCWWGG	5 cut(s)	106, 879, 2085, 2305, 2334
Eco147I	AGGCCT	1 cut(s)	548
Eco24I	GRGCYC	2 cut(s)	1200, 2726
Eco47I	GGWCC	4 cut(s)	142, 361, 876, 2756
Eco47III	AGCGCT	1 cut(s)	317
Eco57I	CTGAAG	4 cut(s)	1176, 2305, 2489, 2630
Eco88I	CYCGRG	3 cut(s)	373, 1735, 2236
EcoO109I	RGGNCCY	1 cut(s)	1196
EcoRI	GAATTC	4 cut(s)	386, 485, 1527, 2431
EcoRII	CCWGG	7 cut(s)	216, 543, 606, 768, 914, 2370, 2624
EcoT14I	CCWWGG	5 cut(s)	106, 879, 2085, 2305, 2334
EcoT22I	ATGCAT	1 cut(s)	414
EcoT38I	GRGCYC	2 cut(s)	1200, 2726
ErhI	CCWWGG	5 cut(s)	106, 879, 2085, 2305, 2334
FalI	AAGNNNNNCTT	4 cut(s)	1174, 1206, 1631, 1663
FaqI	GGGAC	2 cut(s)	128, 2180
FbaI	TGATCA	2 cut(s)	184, 448
FblI	GTMKAC	3 cut(s)	1414, 1779, 1805
Fnu4HI	GCNGC	6 cut(s)	423, 828, 831, 1155, 1271, 2848
FokI	GGATG	8 cut(s)	180, 200, 522, 785, 971, 1515, 1526, 2426
FriOI	GRGCYC	2 cut(s)	1200, 2726
Fsp4HI	GCNGC	6 cut(s)	423, 828, 831, 1155, 1271, 2848
GlaI	GCGC	1 cut(s)	317
GluI	GCNGC	6 cut(s)	423, 828, 831, 1155, 1271, 2848
HaeII	RGCGCY	1 cut(s)	319
HaeIII	GGCC	5 cut(s)	548, 1033, 1198, 2028, 2370
HapII	CCGG	1 cut(s)	120
HgaI	GACGC	1 cut(s)	2345
HhaI	GCGC	1 cut(s)	318
Hin1I	GRCGYC	2 cut(s)	162, 2356
Hin6I	GCGC	1 cut(s)	316
HinP1I	GCGC	1 cut(s)	316
HincII	GTYRAC	4 cut(s)	380, 439, 952, 1806
HindII	GTYRAC	4 cut(s)	380, 439, 952, 1806
HindIII	AAGCTT	2 cut(s)	1888, 2615
HpaII	CCGG	1 cut(s)	120
HphI	GGTGA	2 cut(s)	1058, 2376
Hpy99I	CGWCG	4 cut(s)	161, 164, 167, 2361
HpyAV	CCTTC	5 cut(s)	735, 999, 1176, 1739, 2711
HpyCH4III	ACNGT	5 cut(s)	181, 1410, 1522, 1696, 2269
HpyCH4IV	ACGT	7 cut(s)	132, 162, 294, 964, 1125, 1275, 2102
HpyF10VI	GCNNNNNNNGC	5 cut(s)	266, 545, 1013, 1748, 2614
HpySE526I	ACGT	7 cut(s)	132, 162, 294, 964, 1125, 1275, 2102
Hsp92I	GRCGYC	2 cut(s)	162, 2356
HspAI	GCGC	1 cut(s)	316
Ksp22I	TGATCA	2 cut(s)	184, 448
LmnI	GCTCC	6 cut(s)	206, 560, 1963, 1999, 2509, 2827
Lsp1109I	GCAGC	5 cut(s)	409, 814, 817, 1141, 1282
LweI	GCATC	7 cut(s)	328, 475, 994, 1210, 1237, 1376, 1451
MabI	ACCWGGT	1 cut(s)	914
MaeII	ACGT	7 cut(s)	132, 162, 294, 964, 1125, 1275, 2102
MaeIII	GTNAC	7 cut(s)	355, 493, 1046, 1252, 1450, 1584, 2065
MfeI	CAATTG	1 cut(s)	1230
MflI	RGATCY	1 cut(s)	1379
MhlI	GDGCHC	3 cut(s)	565, 1200, 2726
MlsI	TGGCCA	2 cut(s)	1033, 2370
MluNI	TGGCCA	2 cut(s)	1033, 2370
MmeI	TCCRAC	6 cut(s)	145, 222, 228, 550, 1685, 2539
Mox20I	TGGCCA	2 cut(s)	1033, 2370
Mph1103I	ATGCAT	1 cut(s)	414
MroXI	GAANNNNTTC	3 cut(s)	1905, 2618, 2837
MscI	TGGCCA	2 cut(s)	1033, 2370
MseI	TTAA	9 cut(s)	129, 477, 747, 813, 969, 1074, 1176, 1622, 1638
MslI	CAYNNNNRTG	5 cut(s)	407, 1245, 2084, 2859, 2862
Msp20I	TGGCCA	2 cut(s)	1033, 2370
MspA1I	CMGCKG	1 cut(s)	1963
MspCI	CTTAAG	1 cut(s)	1621
MspI	CCGG	1 cut(s)	120
MspR9I	CCNGG	7 cut(s)	218, 545, 608, 770, 916, 2372, 2626
MunI	CAATTG	1 cut(s)	1230
Mva1269I	GAATGC	1 cut(s)	2291
MvaI	CCWGG	7 cut(s)	218, 545, 608, 770, 916, 2372, 2626
MvnI	CGCG	1 cut(s)	2148
MwoI	GCNNNNNNNGC	5 cut(s)	266, 545, 1013, 1748, 2614
NcoI	CCATGG	2 cut(s)	879, 2085
NheI	GCTAGC	1 cut(s)	1757
NlaIV	GGNNCC	6 cut(s)	144, 202, 920, 1198, 1741, 1959
NmeAIII	GCCGAG	1 cut(s)	2275
NmuCI	GTSAC	5 cut(s)	355, 493, 1046, 1252, 1584
NruI	TCGCGA	1 cut(s)	2148
NsiI	ATGCAT	1 cut(s)	414
NspI	RCATGY	2 cut(s)	406, 2006
PaeR7I	CTCGAG	1 cut(s)	2236
PagI	TCATGA	3 cut(s)	1243, 1558, 2860
PaqCI	CACCTGC	1 cut(s)	1742
PceI	AGGCCT	1 cut(s)	548
PctI	GAATGC	1 cut(s)	2291
PdmI	GAANNNNTTC	3 cut(s)	1905, 2618, 2837
PflFI	GACNNNGTC	3 cut(s)	161, 365, 1520
PflMI	CCANNNNNTGG	2 cut(s)	506, 1712
PfoI	TCCNGGA	1 cut(s)	768
PkrI	GCNGC	6 cut(s)	424, 829, 832, 1156, 1272, 2849
PshAI	GACNNNNGTC	1 cut(s)	636
PshBI	ATTAAT	1 cut(s)	1074
PsiI	TTATAA	2 cut(s)	1929, 2498
Psp1406I	AACGTT	1 cut(s)	2102
Psp6I	CCWGG	7 cut(s)	216, 543, 606, 768, 914, 2370, 2624
PspGI	CCWGG	7 cut(s)	216, 543, 606, 768, 914, 2370, 2624
PspN4I	GGNNCC	6 cut(s)	144, 202, 920, 1198, 1741, 1959
PspOMI	GGGCCC	1 cut(s)	1196
PspPI	GGNCC	7 cut(s)	142, 361, 876, 1196, 1197, 2027, 2756
PstI	CTGCAG	1 cut(s)	835
PsuI	RGATCY	1 cut(s)	1379
PsyI	GACNNNGTC	3 cut(s)	161, 365, 1520
RruI	TCGCGA	1 cut(s)	2148
RsaI	GTAC	5 cut(s)	980, 1189, 1261, 1490, 1704
RsaNI	GTAC	5 cut(s)	979, 1188, 1260, 1489, 1703
RseI	CAYNNNNRTG	5 cut(s)	407, 1245, 2084, 2859, 2862
SalI	GTCGAC	1 cut(s)	1804
SaqAI	TTAA	9 cut(s)	129, 477, 747, 813, 969, 1074, 1176, 1622, 1638
SatI	GCNGC	6 cut(s)	423, 828, 831, 1155, 1271, 2848
Sau96I	GGNCC	7 cut(s)	142, 361, 876, 1196, 1197, 2027, 2756
ScaI	AGTACT	1 cut(s)	1189
ScrFI	CCNGG	7 cut(s)	218, 545, 608, 770, 916, 2372, 2626
SduI	GDGCHC	3 cut(s)	565, 1200, 2726
SexAI	ACCWGGT	1 cut(s)	914
SfaNI	GCATC	7 cut(s)	328, 475, 994, 1210, 1237, 1376, 1451
SfcI	CTRYAG	2 cut(s)	831, 2152
Sfr274I	CTCGAG	1 cut(s)	2236
SinI	GGWCC	4 cut(s)	142, 361, 876, 2756
SlaI	CTCGAG	1 cut(s)	2236
SmiMI	CAYNNNNRTG	5 cut(s)	407, 1245, 2084, 2859, 2862
SmlI	CTYRAG	3 cut(s)	641, 1621, 2236
SmoI	CTYRAG	3 cut(s)	641, 1621, 2236
SpeI	ACTAGT	2 cut(s)	1330, 2776
SseBI	AGGCCT	1 cut(s)	548
SsiI	CCGC	4 cut(s)	1961, 2806, 2845, 2848
StuI	AGGCCT	1 cut(s)	548
StyD4I	CCNGG	7 cut(s)	216, 543, 606, 768, 914, 2370, 2624
StyI	CCWWGG	5 cut(s)	106, 879, 2085, 2305, 2334
TaaI	ACNGT	5 cut(s)	181, 1410, 1522, 1696, 2269
TaiI	ACGT	7 cut(s)	135, 165, 297, 967, 1128, 1278, 2105
TaqI	TCGA	7 cut(s)	489, 576, 595, 856, 1581, 1805, 2237
TaqII	GACCGA	1 cut(s)	43
TatI	WGTACW	3 cut(s)	978, 1187, 1488
TauI	GCSGC	1 cut(s)	2850
Tru1I	TTAA	9 cut(s)	129, 477, 747, 813, 969, 1074, 1176, 1622, 1638
Tru9I	TTAA	9 cut(s)	129, 477, 747, 813, 969, 1074, 1176, 1622, 1638
TscAI	CASTG	4 cut(s)	1261, 1415, 2086, 2116
TseFI	GTSAC	5 cut(s)	355, 493, 1046, 1252, 1584
TseI	GCWGC	5 cut(s)	422, 827, 830, 1154, 1270
Tsp45I	GTSAC	5 cut(s)	355, 493, 1046, 1252, 1584
TspGWI	ACGGA	7 cut(s)	374, 497, 911, 1220, 1690, 2061, 2750
TspRI	CASTG	4 cut(s)	1261, 1415, 2086, 2116
Tth111I	GACNNNGTC	3 cut(s)	161, 365, 1520
Van91I	CCANNNNNTGG	2 cut(s)	506, 1712
Vha464I	CTTAAG	1 cut(s)	1621
VpaK11BI	GGWCC	4 cut(s)	142, 361, 876, 2756
VspI	ATTAAT	1 cut(s)	1074
XapI	RAATTY	9 cut(s)	83, 284, 386, 485, 1169, 1527, 2312, 2431, 2526
XbaI	TCTAGA	1 cut(s)	1600
XceI	RCATGY	2 cut(s)	406, 2006
XcmI	CCANNNNNNNNNTGG	2 cut(s)	507, 2189
XhoI	CTCGAG	1 cut(s)	2236
XmaJI	CCTAGG	1 cut(s)	2305
XmiI	GTMKAC	3 cut(s)	1414, 1779, 1805
XmnI	GAANNNNTTC	3 cut(s)	1905, 2618, 2837
ZraI	GACGTC	1 cut(s)	163
ZrmI	AGTACT	1 cut(s)	1189
Zsp2I	ATGCAT	1 cut(s)	414

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.