Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

SuperScaffold_111

Orthogroup ID

OG0001301

Physical Location & Seq

Genomic Coordinates Forward (+)

186179 .. 193877

Gene Structure 7699 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom111g00240.2

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3075 bp

ATGGCGGCGACTCCGTCCCTCTTGTGCTTGCTTACGTTGCTCGTCGGATTTCTTGTCGCCGACTCCAAGTTTATTGCATACGACACTTCCCAAGGCATAGTCCCCGGCAAAATCAATGTCCATTTGGTCCCTCACACCCACGACGACGTTGGCTGGTTAAAGACCGTTGATCAGTATTATGTTGGCTCCAACAATTCCATCCAGGGGGCTTGCGTGCAAAATGTGTTGGATTCTTTGGTTCCTGCTCTGCTGGCTGACAAGAATCGCAAATTCATTTATGTCGAACAGGCATTCTTCCAGCGGTGGTGGAGAGATCAGAGTGACTCCGTCCAGAGTATAGTCAAGCAGCTAGTCACCTCGGGTCAATTAGAGTTCATAAATGGGGGAATGTGCATGCATGATGAGGCTGCAACACATTATATTGATATGATAGATCAGACGACTCTAGGGCATCGGTTTATTAAAAGGGAATTTGATGTGACTCCAAGAATTGGTTGGCAAATTGACCCATTTGGGCATTCGGCTGTCCAGGCTTACATGTTGGGAGCAGAAGTTGGATTTGACTCACTTTTCTTCGGGCGAATAGATTACCAGGACAGGGCTAAGCGCAAAATTGAGAAGAGCCTTGAATTTGTTTGGCGGGGTTCGAAGAGTCTCAGTTCATCTGCTCAGATTTTTTCTGGTGCATTCCCAGAGAACTATGAGCCTCCATCTGGTTTCTACTTTGAAGTTAATGATGATTCCCCAGTTGTTCAGGATGACATCACTTTGTTTGATTACAATGTTCAAGATCGTGTTAATGACTTTGTTGCTGCTGCAGTAGCACAGGCTAACATAACTCGAACAAATCATATAATGTGGACCATGGGAACAGATTTCAAGTATCAGTATGCACACACATGGTTCCGACAAATGGACAAGCTCATTCATTATGTCAACAAGGATGGACGTGTTAATGCTCTGTATTCTACTCCATCCATATATACGGATGCAAAGTATGCTACAAATGAATCATGGCCAATCAAGACAGATGATTTCTTTCCTTATGCAGATCGTACAAATGCTTACTGGACAGGGTACTTCACAAGTAGACCAGCCTTGAAAAATTACGTTAGAGCAATGAGTGGCTATTATTTGGCTGCCAGGCAATTAGAATATTTTAAAGGAAGGACTGGTTCAGGGCCCAACACAGACTCGTTGGCAGATGCCTTAGCAATTGCGCAACATCATGATGCAGTCAGTGGTACAGAGAAGCAGCATGTTGCCAATGATTATGCAAAAAGATTGGCGATAGGCTACACGGAGGCCGAGCAAGTAGTTGCCACGTCACTTGCTCACTTGGTTGAGTCTGCATTATACACTGGATCTGTCGATCCAACTACAAAGTTTCAACAGTGCCCACTTCTAAATATCAGCTACTGCCCTGCATCAGAAGTGAATTTATCCCAAGGGAAGCAATTGGTTGTCGTGGTGTACAATTCCCTTGGATGGAAGAGGGATGATGTAATTCGAATTCCTGTTATCAATGAAGATGTCACTGTTCATGATTCTGAGGGAAGAGAAATTGAATCACAGCTTCTCCCACTAGATGATGCCCATGCGGGCTTAAGGAACTACCATGCTAAGGCATACTTGGGTCAAACTCCAACAAAGACACCAAACTATTGGCTTGCATTTACAGTATCCGTGCCACCACTCGGTTTCAGCACATACACTATCTCAGCTGCCAAAGGAGCAGGTGCTGGTTCCACCAGATCATCTGTACAGACATTTCAAAGTAGGGAAGAGTCCACTATTGAAGTTGGTCAAGGAAATGTGAAACTCACGTTTTCTACAAATCAAGGCAAACTGACCAATTATGTCAATAGAAGAAGCTTGGTTGAAGAATTGGTCGAACAGTCTTACAGTTTTTATAATGGATATAATGGCAGTGATGATAAAGCTCCTCTGATTCCTCAGAATGCTGGGGCTTATATCTTCCGTCCAAATGGCACGTTTCTCATAAAACCTGGAGAAAAGGCTTCTCTGACTGTCGTGCGTGGACCAGTAATAGATGAAGTACATCAACATATTAATTCATGGATATATCAGGTCACCAGAATTCACAAAGAGAAGGAGCATGTTGAAGTCGAGTTTATTGTTGGGCCATTACCTACTGATGACGGAATTGGAAAAGAAGTTGCAACTCAACTGGCCACTACCATGGCTACCAACAAAACGTTCTACACTGATTCTAATGGGCGTGATTTTATTAAAAGGATTCGCGATTATAGAACAGATTGGGACCTGAAAGTGCACCAACCTATAGCTGGAAATTATTATCCAATTAATCTTGGGATATACATGCAAGATAATAGTACAGAATTTTCGGTTTTGGTGGACCGATCTGTAGGAGGGTCCAGCACAGTGGATGGACAGATAGAGTTGATGCTCCACAGGAGACTACTGCTTGATGACTCAAGAGGTGTGGCAGAGGCTCTAAATGAAACCGTCTGTATTGACAACGTTTGCAGTGGACTAAGAATCCAAGGAAAATTTTATTTCAGAATCGATCCCTTGGGAGAAGGTGCCAAGTGGCGTCGTACTTTTGGTCAGGAGATATATTCCCCTCTTTTACTAGCTTTTTCTGAACAGGATGGAGATAACCGGAAGAATTCTCATGTAACCACGTTTTCAGGGGTTGGTTCCTCGTACAGTTTACCTGATAATGTCGCTCTTATAACTCTTCAGGAGCTTGATGATGGAAAAGTTCTTCTTCGATTAGCACATTTATACGAGATTGGAGAGGACAGGGATCTTTCTGTAATGACAAATGTAGAGTTGAAGCAGCTCTTCCCCAGGAAGAAGATTGGTAAACTGACAGAGATGAATTTGTCGGCAAATCAAGAACGGACAGAAATGGAGAAAAAGAGACTCAATTGGAAGGTGGAAGAAGGCTCTTCATCAGAAGCAAAGGTTTCAAGGGGTGGACCTGTTGATCCTACGAAACTGGTTGTGGAACTTGCACCAATGGAAATCCGAACCTTTCTCATTGAGTTTAACCAAAGCTTCCATCGTTATTTATTTGATGCCTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000323 GO:0001775 GO:0002252 GO:0002263 GO:0002274 GO:0002275 GO:0002283 GO:0002366 GO:0002376 GO:0002443 GO:0002444 GO:0002446 GO:0003674 GO:0003824 GO:0004553 GO:0004559 GO:0005575 GO:0005576 GO:0005615 GO:0005622 GO:0005623 GO:0005737 GO:0005764 GO:0005766 GO:0005773 GO:0005775 GO:0005975 GO:0005996 GO:0006013 GO:0006464 GO:0006517 GO:0006807 GO:0006810 GO:0006887 GO:0006955 GO:0008150 GO:0008152 GO:0009056 GO:0009100 GO:0009311 GO:0009313 GO:0009987 GO:0012505 GO:0015923 GO:0016052 GO:0016192 GO:0016787 GO:0016798 GO:0019318 GO:0019538 GO:0030141 GO:0031410 GO:0031974 GO:0031982 GO:0031983 GO:0032940 GO:0034774 GO:0035578 GO:0036211 GO:0036230 GO:0042119 GO:0042582 GO:0043170 GO:0043202 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0043299 GO:0043312 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044281 GO:0044421 GO:0044422 GO:0044424 GO:0044433 GO:0044437 GO:0044444 GO:0044446 GO:0044464 GO:0045055 GO:0045321 GO:0046903 GO:0050896 GO:0051179 GO:0051234 GO:0060205 GO:0070013 GO:0071704 GO:0097708 GO:0099503 GO:1901135 GO:1901564 GO:1901575

KEGG Pathways

Metabolic & Signaling

ko00511 map00511

Pfam Domains

Protein Families

Alpha-mann_mid Glyco_hydro_38 Glyco_hydro_38C

Protein Analysis

1025

Amino Acids

115.16

Weight (kDa)

5.72

Isoelectric Point (pI)

38.36

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001301)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G13980 AT5G13980 AT5G13980
fragaria_vesca	FvH4_5g09420 FvH4_5g09421 FvH4_6g54272 FvH4_6g54272 FvH4_6g54272 FvH4_6g54272 FvH4_6g54272
malus_domestica	MD06G1131600.v1.1 MD09G1002900.v1.1 MD17G1007000.v1.1
prunus_persica	Prupe.3G313300_v2.0.a1 Prupe.3G313300_v2.0.a1 Prupe.3G313300_v2.0.a1 Prupe.3G313300_v2.0.a1 Prupe.5G142600_v2.0.a1 Prupe.5G142600_v2.0.a1
pyrus_communis	pycom06g12300 pycom06g12310 pycom111g00240 pycom17g00260
rosa_chinensis	RchiOBHm_Chr2g0176471 RchiOBHm_Chr2g0176481 RchiOBHm_Chr7g0188771 RchiOBHm_Chr7g0188781
rosa_laevigata	RLG00000004661 RLG00000004662 RLG00000022416
rosa_multiflora	Rmu_sc0000303.1_g000057 Rmu_sc0003642.1_g000008 Rmu_sc0011904.1_g000012
rosa_roxburghii	Rroxscaffold_2G00076370 Rroxscaffold_3G00266040 Rroxscaffold_3G00266050
rosa_rugosa	Rorug02G0595000 Rorug06G0493700
rosa_samantha	Rh2AG673300 Rh2BG684600 Rh2CG647400 Rh2DG698200 Rh7AG098300 Rh7AG098400 Rh7BG099900 Rh7BG100200 Rh7CG101600 Rh7CG101700 Rh7DG100100 Rh7DG100200
rosa_wichuraiana	Rw0G010390 Rw2G055220 Rw7G008480 Rw7G008490

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	1914, 2720
AarI	CACCTGC	1 cut(s)	1727
Acc16I	TGCGCA	1 cut(s)	1221
Acc36I	ACCTGC	1 cut(s)	1727
AccB1I	GGYRCC	1 cut(s)	2567
AccB7I	CCANNNNNTGG	1 cut(s)	491
AccI	GTMKAC	1 cut(s)	1090
AccII	CGCG	1 cut(s)	2265
AciI	CCGC	4 cut(s)	5, 301, 640, 1601
AclI	AACGTT	2 cut(s)	2219, 2505
AclWI	GGATC	5 cut(s)	1367, 1372, 2546, 2802, 2972
AcoI	YGGCCR	2 cut(s)	1016, 2193
AcuI	CTGAAG	1 cut(s)	2711
AcyI	GRCGYC	1 cut(s)	2578
AfaI	GTAC	9 cut(s)	1057, 1079, 1246, 1475, 1764, 2061, 2359, 2584, 2693
AfiI	CCNNNNNNNGG	9 cut(s)	204, 491, 598, 713, 913, 1488, 1624, 1697, 2309
AflII	CTTAAG	1 cut(s)	1606
AflIII	ACRYGT	2 cut(s)	537, 949
AjiI	CACGTC	2 cut(s)	950, 1326
AjnI	CCWGG	6 cut(s)	201, 528, 591, 1142, 2008, 2837
AjuI	GAANNNNNNNTTGG	2 cut(s)	2204, 2236
Alw21I	GWGCWC	1 cut(s)	2298
Alw26I	GTCTC	3 cut(s)	659, 2434, 2905
Alw44I	GTGCAC	1 cut(s)	2294
AlwI	GGATC	5 cut(s)	1367, 1372, 2546, 2802, 2972
AlwNI	CAGNNNCTG	2 cut(s)	1419, 1742
Ama87I	CYCGRG	1 cut(s)	358
AoxI	GGCC	5 cut(s)	1016, 1181, 1305, 2144, 2193
ApaI	GGGCCC	1 cut(s)	1185
ApaLI	GTGCAC	1 cut(s)	2294
ApeKI	GCWGC	8 cut(s)	346, 407, 812, 815, 1139, 1255, 1724, 2827
ArsI	GACNNNNNNTTYG	2 cut(s)	102, 134
AseI	ATTAAT	2 cut(s)	2073, 2328
AspLEI	GCGC	2 cut(s)	609, 1222
AsuC2I	CCSGG	1 cut(s)	105
AsuHPI	GGTGA	2 cut(s)	346, 2086
AsuII	TTCGAA	2 cut(s)	647, 1510
AvaI	CYCGRG	1 cut(s)	358
AvaII	GGWCC	7 cut(s)	127, 861, 2042, 2284, 2380, 2397, 2969
BaeGI	GKGCMC	3 cut(s)	1185, 1400, 2298
BalI	TGGCCA	2 cut(s)	1018, 2195
BanI	GGYRCC	1 cut(s)	2567
BanII	GRGCYC	1 cut(s)	1185
Bbv12I	GWGCWC	1 cut(s)	2298
BbvI	GCAGC	8 cut(s)	358, 394, 799, 802, 1126, 1267, 1711, 2839
BccI	CCATC	9 cut(s)	206, 718, 938, 982, 1482, 2405, 2630, 2735, 3060
BciT130I	CCWGG	6 cut(s)	203, 530, 593, 1144, 2010, 2839
BciVI	GTATCC	1 cut(s)	1693
BclI	TGATCA	1 cut(s)	169
BcnI	CCSGG	1 cut(s)	105
BcoDI	GTCTC	3 cut(s)	659, 2434, 2905
BfaI	CTAG	4 cut(s)	350, 446, 1586, 2618
BfmI	CTRYAG	3 cut(s)	816, 2304, 2388
BfrI	CTTAAG	1 cut(s)	1606
BfuAI	ACCTGC	1 cut(s)	1727
BfuI	GTATCC	1 cut(s)	1693
BisI	GCNGC	9 cut(s)	6, 347, 408, 813, 816, 1140, 1256, 1725, 2828
BlpI	GCTNAGC	1 cut(s)	603
BlsI	GCNGC	9 cut(s)	7, 348, 409, 814, 817, 1141, 1257, 1726, 2829
Bme1390I	CCNGG	7 cut(s)	105, 203, 530, 593, 1144, 2010, 2839
Bme18I	GGWCC	7 cut(s)	127, 861, 2042, 2284, 2380, 2397, 2969
BmeT110I	CYCGRG	1 cut(s)	358
BmgBI	CACGTC	2 cut(s)	950, 1326
BmrFI	CCNGG	7 cut(s)	105, 203, 530, 593, 1144, 2010, 2839
BmrI	ACTGGG	1 cut(s)	740
BmsI	GCATC	8 cut(s)	460, 979, 1195, 1222, 1436, 1582, 2418, 3058
BmuI	ACTGGG	1 cut(s)	740
BpmI	CTGGAG	1 cut(s)	2031
Bpu10I	CCTNAGC	2 cut(s)	1210, 1623
Bpu1102I	GCTNAGC	1 cut(s)	603
Bpu14I	TTCGAA	2 cut(s)	647, 1510
BpuEI	CTTGAG	1 cut(s)	2443
BpuMI	CCSGG	1 cut(s)	105
Bsa29I	ATCGAT	1 cut(s)	2550
BsaHI	GRCGYC	1 cut(s)	2578
BsaWI	WCCGGW	1 cut(s)	2646
BsaXI	ACNNNNNCTCC	4 cut(s)	537, 567, 1563, 1593
Bsc4I	CCNNNNNNNGG	9 cut(s)	204, 491, 598, 713, 913, 1488, 1624, 1697, 2309
Bse1I	ACTGG	7 cut(s)	746, 1073, 1177, 1366, 2045, 2196, 2994
Bse3DI	GCAATG	1 cut(s)	1125
BseBI	CCWGG	6 cut(s)	203, 530, 593, 1144, 2010, 2839
BseCI	ATCGAT	1 cut(s)	2550
BseGI	GGATG	9 cut(s)	198, 763, 949, 974, 994, 1493, 1504, 2416, 2641
BseLI	CCNNNNNNNGG	9 cut(s)	204, 491, 598, 713, 913, 1488, 1624, 1697, 2309
BseMI	GCAATG	1 cut(s)	1125
BseMII	CTCAG	5 cut(s)	670, 683, 1542, 1734, 1970
BseNI	ACTGG	7 cut(s)	746, 1073, 1177, 1366, 2045, 2196, 2994
BseRI	GAGGAG	1 cut(s)	1935
BseSI	GKGCMC	3 cut(s)	1185, 1400, 2298
BseXI	GCAGC	8 cut(s)	358, 394, 799, 802, 1126, 1267, 1711, 2839
BseYI	CCCAGC	1 cut(s)	1964
Bsh1236I	CGCG	1 cut(s)	2265
BshFI	GGCC	5 cut(s)	1018, 1183, 1307, 2146, 2195
BshNI	GGYRCC	1 cut(s)	2567
BshVI	ATCGAT	1 cut(s)	2550
BsiHKAI	GWGCWC	1 cut(s)	2298
BsiHKCI	CYCGRG	1 cut(s)	358
BsiSI	CCGG	2 cut(s)	105, 2647
BslFI	GGGAC	3 cut(s)	86, 113, 2297
BslI	CCNNNNNNNGG	9 cut(s)	204, 491, 598, 713, 913, 1488, 1624, 1697, 2309
BsmAI	GTCTC	3 cut(s)	659, 2434, 2905
BsmFI	GGGAC	3 cut(s)	86, 113, 2297
BsmI	GAATGC	4 cut(s)	290, 517, 686, 1966
BsnI	GGCC	5 cut(s)	1018, 1183, 1307, 2146, 2195
BsoBI	CYCGRG	1 cut(s)	358
Bsp119I	TTCGAA	2 cut(s)	647, 1510
Bsp120I	GGGCCC	1 cut(s)	1181
Bsp1286I	GDGCHC	3 cut(s)	1185, 1400, 2298
Bsp1407I	TGTACA	2 cut(s)	1473, 1762
Bsp1720I	GCTNAGC	1 cut(s)	603
Bsp19I	CCATGG	2 cut(s)	864, 2202
Bsp68I	TCGCGA	1 cut(s)	2265
BspACI	CCGC	4 cut(s)	5, 301, 640, 1601
BspANI	GGCC	5 cut(s)	1018, 1183, 1307, 2146, 2195
BspCNI	CTCAG	5 cut(s)	669, 682, 1543, 1733, 1969
BspDI	ATCGAT	1 cut(s)	2550
BspFNI	CGCG	1 cut(s)	2265
BspHI	TCATGA	2 cut(s)	1228, 1543
BspMAI	CTGCAG	1 cut(s)	820
BspMI	ACCTGC	1 cut(s)	1727
BspPI	GGATC	5 cut(s)	1367, 1372, 2546, 2802, 2972
BspQI	GCTCTTC	3 cut(s)	614, 2837, 2944
BspT104I	TTCGAA	2 cut(s)	647, 1510
BspT107I	GGYRCC	1 cut(s)	2567
BspTI	CTTAAG	1 cut(s)	1606
BsrDI	GCAATG	1 cut(s)	1125
BsrGI	TGTACA	2 cut(s)	1473, 1762
BsrI	ACTGG	7 cut(s)	746, 1073, 1177, 1366, 2045, 2196, 2994
BssNI	GRCGYC	1 cut(s)	2578
BssT1I	CCWWGG	7 cut(s)	91, 864, 1447, 1483, 2202, 2527, 2556
Bst2UI	CCWGG	6 cut(s)	203, 530, 593, 1144, 2010, 2839
Bst6I	CTCTTC	8 cut(s)	614, 644, 1487, 1552, 1779, 2730, 2837, 2944
BstACI	GRCGYC	1 cut(s)	2578
BstAFI	CTTAAG	1 cut(s)	1606
BstAPI	GCANNNNNTGC	1 cut(s)	998
BstAUI	TGTACA	2 cut(s)	1473, 1762
BstBI	TTCGAA	2 cut(s)	647, 1510
BstC8I	GCNNGC	7 cut(s)	29, 211, 215, 252, 395, 1603, 1671
BstDEI	CTNAG	9 cut(s)	603, 656, 669, 1210, 1551, 1623, 1720, 1956, 2519
BstDSI	CCRYGG	2 cut(s)	864, 2202
BstEII	GGTNACC	1 cut(s)	2092
BstF5I	GGATG	9 cut(s)	198, 763, 949, 974, 994, 1493, 1504, 2416, 2641
BstFNI	CGCG	1 cut(s)	2265
BstHHI	GCGC	2 cut(s)	609, 1222
BstMAI	GTCTC	3 cut(s)	659, 2434, 2905
BstMWI	GCNNNNNNNGC	6 cut(s)	37, 251, 530, 821, 998, 1733
BstNI	CCWGG	6 cut(s)	203, 530, 593, 1144, 2010, 2839
BstNSI	RCATGY	5 cut(s)	397, 541, 1262, 2123, 2347
BstPI	GGTNACC	1 cut(s)	2092
BstSCI	CCNGG	7 cut(s)	103, 201, 528, 591, 1142, 2008, 2837
BstSFI	CTRYAG	3 cut(s)	816, 2304, 2388
BstSLI	GKGCMC	3 cut(s)	1185, 1400, 2298
BstUI	CGCG	1 cut(s)	2265
BstV1I	GCAGC	8 cut(s)	358, 394, 799, 802, 1126, 1267, 1711, 2839
BstX2I	RGATCY	2 cut(s)	1364, 2794
BstXI	CCANNNNNNTGG	3 cut(s)	1665, 2203, 2407
BstYI	RGATCY	2 cut(s)	1364, 2794
Bsu15I	ATCGAT	1 cut(s)	2550
BsuI	GTATCC	1 cut(s)	1693
BsuRI	GGCC	5 cut(s)	1018, 1183, 1307, 2146, 2195
BsuTUI	ATCGAT	1 cut(s)	2550
BtgI	CCRYGG	2 cut(s)	864, 2202
BtrI	CACGTC	2 cut(s)	950, 1326
BtsCI	GGATG	9 cut(s)	198, 763, 949, 974, 994, 1493, 1504, 2416, 2641
BtsI	GCAGTG	2 cut(s)	1936, 2518
BtsIMutI	CAGTG	8 cut(s)	1246, 1359, 1400, 1536, 1936, 2226, 2412, 2518
BtuMI	TCGCGA	1 cut(s)	2265
BveI	ACCTGC	1 cut(s)	1727
Cac8I	GCNNGC	7 cut(s)	29, 211, 215, 252, 395, 1603, 1671
CaiI	CAGNNNCTG	2 cut(s)	1419, 1742
CciI	TCATGA	2 cut(s)	1228, 1543
CfoI	GCGC	2 cut(s)	609, 1222
ClaI	ATCGAT	1 cut(s)	2550
CseI	GACGC	1 cut(s)	2567
Csp6I	GTAC	9 cut(s)	1056, 1078, 1245, 1474, 1763, 2060, 2358, 2583, 2692
CspCI	CAANNNNNGTGG	4 cut(s)	1312, 1347, 2448, 2483
CviQI	GTAC	9 cut(s)	1056, 1078, 1245, 1474, 1763, 2060, 2358, 2583, 2692
DdeI	CTNAG	9 cut(s)	603, 656, 669, 1210, 1551, 1623, 1720, 1956, 2519
DraI	TTTAAA	1 cut(s)	1162
EaeI	YGGCCR	2 cut(s)	1016, 2193
Eam1104I	CTCTTC	8 cut(s)	614, 644, 1487, 1552, 1779, 2730, 2837, 2944
EarI	CTCTTC	8 cut(s)	614, 644, 1487, 1552, 1779, 2730, 2837, 2944
Eco130I	CCWWGG	7 cut(s)	91, 864, 1447, 1483, 2202, 2527, 2556
Eco24I	GRGCYC	1 cut(s)	1185
Eco47I	GGWCC	7 cut(s)	127, 861, 2042, 2284, 2380, 2397, 2969
Eco57I	CTGAAG	1 cut(s)	2711
Eco88I	CYCGRG	1 cut(s)	358
Eco91I	GGTNACC	1 cut(s)	2092
EcoO109I	RGGNCCY	2 cut(s)	1181, 2284
EcoO65I	GGTNACC	1 cut(s)	2092
EcoRI	GAATTC	3 cut(s)	1512, 2100, 2653
EcoRII	CCWGG	6 cut(s)	201, 528, 591, 1142, 2008, 2837
EcoT14I	CCWWGG	7 cut(s)	91, 864, 1447, 1483, 2202, 2527, 2556
EcoT22I	ATGCAT	1 cut(s)	399
EcoT38I	GRGCYC	1 cut(s)	1185
ErhI	CCWWGG	7 cut(s)	91, 864, 1447, 1483, 2202, 2527, 2556
FalI	AAGNNNNNCTT	6 cut(s)	1616, 1648, 2739, 2771, 2816, 2848
FaqI	GGGAC	3 cut(s)	86, 113, 2297
FauI	CCCGC	2 cut(s)	633, 1594
FbaI	TGATCA	1 cut(s)	169
FblI	GTMKAC	1 cut(s)	1090
Fnu4HI	GCNGC	9 cut(s)	6, 347, 408, 813, 816, 1140, 1256, 1725, 2828
FokI	GGATG	9 cut(s)	185, 770, 956, 961, 1001, 1500, 1511, 2423, 2648
FriOI	GRGCYC	1 cut(s)	1185
Fsp4HI	GCNGC	9 cut(s)	6, 347, 408, 813, 816, 1140, 1256, 1725, 2828
FspBI	CTAG	4 cut(s)	350, 446, 1586, 2618
FspI	TGCGCA	1 cut(s)	1221
GlaI	GCGC	2 cut(s)	608, 1221
GluI	GCNGC	9 cut(s)	6, 347, 408, 813, 816, 1140, 1256, 1725, 2828
GsaI	CCCAGC	1 cut(s)	1968
GsuI	CTGGAG	1 cut(s)	2031
HaeIII	GGCC	5 cut(s)	1018, 1183, 1307, 2146, 2195
HapII	CCGG	2 cut(s)	105, 2647
HgaI	GACGC	1 cut(s)	2567
HhaI	GCGC	2 cut(s)	609, 1222
Hin1I	GRCGYC	1 cut(s)	2578
Hin6I	GCGC	2 cut(s)	607, 1220
HinP1I	GCGC	2 cut(s)	607, 1220
HincII	GTYRAC	1 cut(s)	937
HindII	GTYRAC	1 cut(s)	937
HindIII	AAGCTT	2 cut(s)	1873, 3046
HpaII	CCGG	2 cut(s)	105, 2647
HphI	GGTGA	2 cut(s)	346, 2086
Hpy99I	CGWCG	4 cut(s)	47, 146, 149, 2583
HpyAV	CCTTC	5 cut(s)	1161, 2107, 2558, 2917, 2927
HpyF10VI	GCNNNNNNNGC	6 cut(s)	37, 251, 530, 821, 998, 1733
HpyF3I	CTNAG	9 cut(s)	603, 656, 669, 1210, 1551, 1623, 1720, 1956, 2519
Hsp92I	GRCGYC	1 cut(s)	2578
HspAI	GCGC	2 cut(s)	607, 1220
Ksp22I	TGATCA	1 cut(s)	169
LguI	GCTCTTC	3 cut(s)	614, 2837, 2944
LmnI	GCTCC	7 cut(s)	191, 545, 1733, 1948, 2116, 2436, 2731
Lsp1109I	GCAGC	8 cut(s)	358, 394, 799, 802, 1126, 1267, 1711, 2839
LweI	GCATC	8 cut(s)	460, 979, 1195, 1222, 1436, 1582, 2418, 3058
MaeI	CTAG	4 cut(s)	350, 446, 1586, 2618
MaeIII	GTNAC	7 cut(s)	320, 352, 478, 1326, 1534, 2092, 2662
MfeI	CAATTG	3 cut(s)	1215, 1457, 2917
MflI	RGATCY	2 cut(s)	1364, 2794
MhlI	GDGCHC	3 cut(s)	1185, 1400, 2298
MlsI	TGGCCA	2 cut(s)	1018, 2195
MluNI	TGGCCA	2 cut(s)	1018, 2195
MmeI	TCCRAC	7 cut(s)	25, 207, 213, 535, 931, 1400, 1670
Mox20I	TGGCCA	2 cut(s)	1018, 2195
Mph1103I	ATGCAT	1 cut(s)	399
MscI	TGGCCA	2 cut(s)	1018, 2195
MslI	CAYNNNNRTG	3 cut(s)	898, 1230, 2201
Msp20I	TGGCCA	2 cut(s)	1018, 2195
MspA1I	CMGCKG	2 cut(s)	301, 1724
MspCI	CTTAAG	1 cut(s)	1606
MspI	CCGG	2 cut(s)	105, 2647
MspR9I	CCNGG	7 cut(s)	105, 203, 530, 593, 1144, 2010, 2839
MunI	CAATTG	3 cut(s)	1215, 1457, 2917
Mva1269I	GAATGC	4 cut(s)	290, 517, 686, 1966
MvaI	CCWGG	6 cut(s)	203, 530, 593, 1144, 2010, 2839
MvnI	CGCG	1 cut(s)	2265
MwoI	GCNNNNNNNGC	6 cut(s)	37, 251, 530, 821, 998, 1733
NciI	CCSGG	1 cut(s)	105
NcoI	CCATGG	2 cut(s)	864, 2202
NmeAIII	GCCGAG	1 cut(s)	1333
NmuCI	GTSAC	6 cut(s)	320, 352, 478, 1326, 1534, 2092
NruI	TCGCGA	1 cut(s)	2265
NsbI	TGCGCA	1 cut(s)	1221
NsiI	ATGCAT	1 cut(s)	399
NspI	RCATGY	5 cut(s)	397, 541, 1262, 2123, 2347
NspV	TTCGAA	2 cut(s)	647, 1510
PaeI	GCATGC	1 cut(s)	397
PagI	TCATGA	2 cut(s)	1228, 1543
PaqCI	CACCTGC	1 cut(s)	1727
PciI	ACATGT	1 cut(s)	537
PciSI	GCTCTTC	3 cut(s)	614, 2837, 2944
PctI	GAATGC	4 cut(s)	290, 517, 686, 1966
PflFI	GACNNNGTC	2 cut(s)	13, 326
PflMI	CCANNNNNTGG	1 cut(s)	491
PkrI	GCNGC	9 cut(s)	7, 348, 409, 814, 817, 1141, 1257, 1726, 2829
PpuMI	RGGWCCY	1 cut(s)	2284
PscI	ACATGT	1 cut(s)	537
PshBI	ATTAAT	2 cut(s)	2073, 2328
PsiI	TTATAA	2 cut(s)	1914, 2720
Psp1406I	AACGTT	2 cut(s)	2219, 2505
Psp5II	RGGWCCY	1 cut(s)	2284
Psp6I	CCWGG	6 cut(s)	201, 528, 591, 1142, 2008, 2837
PspEI	GGTNACC	1 cut(s)	2092
PspFI	CCCAGC	1 cut(s)	1964
PspGI	CCWGG	6 cut(s)	201, 528, 591, 1142, 2008, 2837
PspOMI	GGGCCC	1 cut(s)	1181
PspPPI	RGGWCCY	1 cut(s)	2284
PstI	CTGCAG	1 cut(s)	820
PstNI	CAGNNNCTG	2 cut(s)	1419, 1742
PsuI	RGATCY	2 cut(s)	1364, 2794
PsyI	GACNNNGTC	2 cut(s)	13, 326
PvuII	CAGCTG	1 cut(s)	1724
RruI	TCGCGA	1 cut(s)	2265
RsaI	GTAC	9 cut(s)	1057, 1079, 1246, 1475, 1764, 2061, 2359, 2584, 2693
RsaNI	GTAC	9 cut(s)	1056, 1078, 1245, 1474, 1763, 2060, 2358, 2583, 2692
RseI	CAYNNNNRTG	3 cut(s)	898, 1230, 2201
SapI	GCTCTTC	3 cut(s)	614, 2837, 2944
SatI	GCNGC	9 cut(s)	6, 347, 408, 813, 816, 1140, 1256, 1725, 2828
ScrFI	CCNGG	7 cut(s)	105, 203, 530, 593, 1144, 2010, 2839
SduI	GDGCHC	3 cut(s)	1185, 1400, 2298
SfaNI	GCATC	8 cut(s)	460, 979, 1195, 1222, 1436, 1582, 2418, 3058
SfcI	CTRYAG	3 cut(s)	816, 2304, 2388
SfuI	TTCGAA	2 cut(s)	647, 1510
SinI	GGWCC	7 cut(s)	127, 861, 2042, 2284, 2380, 2397, 2969
SmiMI	CAYNNNNRTG	3 cut(s)	898, 1230, 2201
SmlI	CTYRAG	2 cut(s)	1606, 2458
SmoI	CTYRAG	2 cut(s)	1606, 2458
SphI	GCATGC	1 cut(s)	397
SsiI	CCGC	4 cut(s)	5, 301, 640, 1601
SspI	AATATT	1 cut(s)	1157
SspMI	CTAG	4 cut(s)	350, 446, 1586, 2618
StyD4I	CCNGG	7 cut(s)	103, 201, 528, 591, 1142, 2008, 2837
StyI	CCWWGG	7 cut(s)	91, 864, 1447, 1483, 2202, 2527, 2556
TaqI	TCGA	9 cut(s)	282, 647, 841, 1371, 1510, 1893, 2130, 2550, 2758
TaqII	GACCGA	1 cut(s)	2397
TatI	WGTACW	4 cut(s)	1473, 1762, 2059, 2357
TauI	GCSGC	1 cut(s)	8
TscAI	CASTG	8 cut(s)	1246, 1366, 1400, 1543, 1936, 2233, 2412, 2518
TseFI	GTSAC	6 cut(s)	320, 352, 478, 1326, 1534, 2092
TseI	GCWGC	8 cut(s)	346, 407, 812, 815, 1139, 1255, 1724, 2827
Tsp45I	GTSAC	6 cut(s)	320, 352, 478, 1326, 1534, 2092
TspGWI	ACGGA	7 cut(s)	316, 1001, 1316, 1675, 1970, 2178, 2905
TspRI	CASTG	8 cut(s)	1246, 1366, 1400, 1543, 1936, 2233, 2412, 2518
Tth111I	GACNNNGTC	2 cut(s)	13, 326
Van91I	CCANNNNNTGG	1 cut(s)	491
Vha464I	CTTAAG	1 cut(s)	1606
VneI	GTGCAC	1 cut(s)	2294
VpaK11BI	GGWCC	7 cut(s)	127, 861, 2042, 2284, 2380, 2397, 2969
VspI	ATTAAT	2 cut(s)	2073, 2328
XceI	RCATGY	5 cut(s)	397, 541, 1262, 2123, 2347
XcmI	CCANNNNNNNNNTGG	3 cut(s)	146, 492, 2306
XmiI	GTMKAC	1 cut(s)	1090
XspI	CTAG	4 cut(s)	350, 446, 1586, 2618
Zsp2I	ATGCAT	1 cut(s)	399

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.