Basic Information

Type: gene

Biological Identity

Species

rosa_chinensis

Chromosome

Orthogroup ID

OG0001301

Physical Location & Seq

Genomic Coordinates Reverse (-)

88264504 .. 88269917

Gene Structure 5414 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

PRQ54347

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1794 bp

ATGGAGTCTGAGCAACTAGTTGCAACTTCACTTGCTCACTTGGTTGAGTCTGCATCATATACTGGATCTGGAAACCCAACTACAAAGTTTCAACAGTGTCTACTTCTGAATATAAGCTATTGCCCTGCATCAGAAGTAACTTTGTCTCAGGGGAAAAAATTGATTGTTGTGGTGTACAATTCTCTTGGATGGAAGAGGGATGACACAGTCCGAATTCCTGTTATCAATGAAGATGTCATTGTTCATGATTCTGAGGGAAAAGCAATCGAGTCACAGCTTCTTCCTCTAGATGATGTCCATCTGGGCTTAAGGAACTACTATGTTAAGGCATACTTGGGTCAAACTCCAACAAAGACACCAAAGTATTGGCTTGTGTTTACAGTATCCGTACCACCACTTGGTTTTAGCACATACACTATCTCGGGTGCCGAAGGGGCAGGTGCTAGCTCAACCAGATCATCTGTATACACCTTTCAAAGCAGAGAAAAGTCGACTATTGAAGTTGGTCAAGGAAATGTGAAACTCTCTTTTTCCACAGAACAAGGCAAAATGACTAATTATGTCAATAGCAGAAGCTTGGTGGAAGAATCGGTTCAGCAGTCTTACAGCTTTTATAATGGGTATAATGGCAGTAATGATAAGGCTCCACTGATTCCTCAGAATTCTGGGGCATATGTTTTCCGGCCTAATGGAACATTTCTCATAACACCCGAAGAAAAGGCTTCTTTGACTGTTATACGTGGACCAGTAATAGATGAAGTACATCAACAGATTAATTCGTGGATACATCAGATCACTAGACTTCACAAGGAAAAGGAGCATGTTGAAGTTGAGTTTATTGTTGGCCCTATACCTACTGATGATGGAATTGGAAAAGAAGTTGTAACTCAATTAGACACTGCCATGGCTACCAACAAAACGTTCTACACTGATTCTAATGGGCGTGATTTTATCAAAAGGATTCGCGACTATAGAACAGATTGGGACTTCAAAGTGAACCAACCTGTTGCTGGAAATTATTACCCAATTAATCTTGGGATTTACATGCAAGATAATAGGACAGAATTTTCAGTTTTGGTGGATCGGTCACTAGGGGGATCCAGCACAGTGGATGGTCAGATAGAGCTGATGCTTCACAGGAGACTACTACTTGATGACTCAAGAGGTGTTGCCGAGGCTCTAAATGAAACTGTCTGTGTTTCCGATGAATGCACAGGACTAAGAGTCCTAGGGAAATTTTACTTCAGAATTGACCCCTTGGGAGATGGTGCTAAGTGGCGTCGTTCTTTTGGCCAGGAGATATATTCACCTCTTCTCCTAGCCTTTGCTGAACAGGATGGAGATAACTGGAAGAATTCTCATGCAACCACTTTTTCTGGGATTGATTCCTCGTATAGTTTACCTGATAATGTTGCTCTTATAACTCTTCAGGAGCTTGATGATGGAAAAATTCTCATTCGCTTAGCACATTTATACGAGGTTGGAGAGGACAAGGATTTTTCTGTAATGGCAAATGTGGAGCTGAAGAAGCTTTTCCCCAGGAAGAAGATTGGCAAAGCAACAGAAATGAACTTATCAGCTAATCAAGAAAGGACTGAAATGGAGAGAAAGAGACTGGTATGGAAAAAGGAAGGGGGCTCGTCAGGAACGGAAAAGGGTGTGAGGGGTGGACCTGTTGATCCTGCAAAACTAGTTGTGGAACTTGCCCCAATGGAAATCCGCACCTTCCTCATTGACTTGGAGCAGAAGTTCTTCCACCGCCGCCATCATCATCATGATGTATCTGATGTATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000323 GO:0001775 GO:0002252 GO:0002263 GO:0002274 GO:0002275 GO:0002283 GO:0002366 GO:0002376 GO:0002443 GO:0002444 GO:0002446 GO:0003674 GO:0003824 GO:0004553 GO:0004559 GO:0005575 GO:0005576 GO:0005615 GO:0005622 GO:0005623 GO:0005737 GO:0005764 GO:0005766 GO:0005773 GO:0005775 GO:0005975 GO:0005996 GO:0006013 GO:0006464 GO:0006517 GO:0006807 GO:0006810 GO:0006887 GO:0006955 GO:0008150 GO:0008152 GO:0009056 GO:0009100 GO:0009311 GO:0009313 GO:0009987 GO:0012505 GO:0015923 GO:0016052 GO:0016192 GO:0016787 GO:0016798 GO:0019318 GO:0019538 GO:0030141 GO:0031410 GO:0031974 GO:0031982 GO:0031983 GO:0032940 GO:0034774 GO:0035578 GO:0036211 GO:0036230 GO:0042119 GO:0042582 GO:0043170 GO:0043202 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0043299 GO:0043312 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044281 GO:0044421 GO:0044422 GO:0044424 GO:0044433 GO:0044437 GO:0044444 GO:0044446 GO:0044464 GO:0045055 GO:0045321 GO:0046903 GO:0050896 GO:0051179 GO:0051234 GO:0060205 GO:0070013 GO:0071704 GO:0097708 GO:0099503 GO:1901135 GO:1901564 GO:1901575

KEGG Pathways

Metabolic & Signaling

ko00511 map00511

Pfam Domains

Protein Families

Alpha-mann_mid Glyco_hydro_38 Glyco_hydro_38C

Protein Analysis

597

Amino Acids

66.9

Weight (kDa)

5.83

Isoelectric Point (pI)

40.02

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Laman-like_dom	PF21260	89 - 140	2.9e-12	Lysosomal alpha-mannosidase-like, central domain
Glyco_hydro_38C	PF07748	169 - 388	2.3e-47	Glycosyl hydrolases family 38 C-terminal domain
Glyco_hydro38C2	PF17677	470 - 576	4.5e-09	Glycosyl hydrolases family 38 C-terminal beta sandwich domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001301)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G13980 AT5G13980 AT5G13980
fragaria_vesca	FvH4_5g09420 FvH4_5g09421 FvH4_6g54272 FvH4_6g54272 FvH4_6g54272 FvH4_6g54272 FvH4_6g54272
malus_domestica	MD06G1131600.v1.1 MD09G1002900.v1.1 MD17G1007000.v1.1
prunus_persica	Prupe.3G313300_v2.0.a1 Prupe.3G313300_v2.0.a1 Prupe.3G313300_v2.0.a1 Prupe.3G313300_v2.0.a1 Prupe.5G142600_v2.0.a1 Prupe.5G142600_v2.0.a1
pyrus_communis	pycom06g12300 pycom06g12310 pycom111g00240 pycom17g00260
rosa_chinensis	RchiOBHm_Chr2g0176471 RchiOBHm_Chr2g0176481 RchiOBHm_Chr7g0188771 RchiOBHm_Chr7g0188781
rosa_laevigata	RLG00000004661 RLG00000004662 RLG00000022416
rosa_multiflora	Rmu_sc0000303.1_g000057 Rmu_sc0003642.1_g000008 Rmu_sc0011904.1_g000012
rosa_roxburghii	Rroxscaffold_2G00076370 Rroxscaffold_3G00266040 Rroxscaffold_3G00266050
rosa_rugosa	Rorug02G0595000 Rorug06G0493700
rosa_samantha	Rh2AG673300 Rh2BG684600 Rh2CG647400 Rh2DG698200 Rh7AG098300 Rh7AG098400 Rh7BG099900 Rh7BG100200 Rh7CG101600 Rh7CG101700 Rh7DG100100 Rh7DG100200
rosa_wichuraiana	Rw0G010390 Rw2G055220 Rw7G008480 Rw7G008490

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	615, 1421
AarI	CACCTGC	1 cut(s)	428
Acc36I	ACCTGC	1 cut(s)	428
AccB1I	GGYRCC	1 cut(s)	425
AccB7I	CCANNNNNTGG	1 cut(s)	398
AccI	GTMKAC	3 cut(s)	100, 465, 491
AccII	CGCG	1 cut(s)	966
AciI	CCGC	3 cut(s)	1720, 1759, 1762
AclI	AACGTT	1 cut(s)	920
AclWI	GGATC	5 cut(s)	73, 1089, 1092, 1105, 1673
AcoI	YGGCCR	1 cut(s)	1291
AcsI	RAATTY	6 cut(s)	213, 661, 1064, 1235, 1354, 1449
AcuI	CTGAAG	3 cut(s)	1228, 1412, 1544
AcyI	GRCGYC	1 cut(s)	1279
AfaI	GTAC	3 cut(s)	176, 390, 762
AfiI	CCNNNNNNNGG	2 cut(s)	398, 1010
AflII	CTTAAG	1 cut(s)	307
AgsI	TTSAA	5 cut(s)	92, 476, 500, 827, 991
AhdI	GACNNNNNGTC	1 cut(s)	1223
AhlI	ACTAGT	2 cut(s)	16, 1690
AjnI	CCWGG	2 cut(s)	1293, 1538
AjuI	GAANNNNNNNTTGG	2 cut(s)	905, 937
AloI	GAACNNNNNNTCC	2 cut(s)	1733, 1765
Alw26I	GTCTC	3 cut(s)	150, 1135, 1606
AlwI	GGATC	5 cut(s)	73, 1089, 1092, 1105, 1673
Ama87I	CYCGRG	1 cut(s)	421
AoxI	GGCC	3 cut(s)	683, 844, 1291
ApoI	RAATTY	6 cut(s)	213, 661, 1064, 1235, 1354, 1449
AseI	ATTAAT	2 cut(s)	774, 1029
Asp700I	GAANNNNTTC	3 cut(s)	591, 1532, 1751
AspA2I	CCTAGG	1 cut(s)	1228
AspS9I	GGNCC	3 cut(s)	743, 845, 1670
AsuHPI	GGTGA	1 cut(s)	1299
AsuNHI	GCTAGC	1 cut(s)	443
AvaI	CYCGRG	1 cut(s)	421
AvaII	GGWCC	2 cut(s)	743, 1670
AvrII	CCTAGG	1 cut(s)	1228
BalI	TGGCCA	1 cut(s)	1293
BamHI	GGATCC	1 cut(s)	1097
BanI	GGYRCC	1 cut(s)	425
BanII	GRGCYC	1 cut(s)	1640
BccI	CCATC	8 cut(s)	183, 306, 857, 1106, 1259, 1331, 1436, 1773
BciT130I	CCWGG	2 cut(s)	1295, 1540
BciVI	GTATCC	2 cut(s)	394, 777
BcoDI	GTCTC	3 cut(s)	150, 1135, 1606
BcuI	ACTAGT	2 cut(s)	16, 1690
BfaI	CTAG	8 cut(s)	17, 287, 444, 798, 1091, 1229, 1319, 1691
BfmI	CTRYAG	1 cut(s)	970
BfrI	CTTAAG	1 cut(s)	307
BfuAI	ACCTGC	1 cut(s)	428
BfuI	GTATCC	2 cut(s)	394, 777
BglI	GCCNNNNNGGC	1 cut(s)	434
BisI	GCNGC	1 cut(s)	1762
BlnI	CCTAGG	1 cut(s)	1228
BlpI	GCTNAGC	1 cut(s)	1462
BlsI	GCNGC	1 cut(s)	1763
Bme1390I	CCNGG	2 cut(s)	1295, 1540
Bme18I	GGWCC	2 cut(s)	743, 1670
BmeRI	GACNNNNNGTC	1 cut(s)	1223
BmeT110I	CYCGRG	1 cut(s)	421
BmgT120I	GGNCC	3 cut(s)	743, 845, 1670
BmiI	GGNNCC	3 cut(s)	427, 645, 1099
BmrFI	CCNGG	2 cut(s)	1295, 1540
BmsI	GCATC	3 cut(s)	62, 137, 1119
BmtI	GCTAGC	1 cut(s)	447
Bpu1102I	GCTNAGC	1 cut(s)	1462
BpuEI	CTTGAG	1 cut(s)	1144
BsaAI	YACGTR	1 cut(s)	740
BsaBI	GATNNNNATC	1 cut(s)	297
BsaHI	GRCGYC	1 cut(s)	1279
BsaJI	CCNNGG	5 cut(s)	903, 1173, 1228, 1257, 1538
BsaXI	ACNNNNNCTCC	4 cut(s)	1299, 1329, 1733, 1763
Bsc4I	CCNNNNNNNGG	2 cut(s)	398, 1010
Bse1I	ACTGG	4 cut(s)	67, 746, 1352, 1620
Bse8I	GATNNNNATC	1 cut(s)	297
BseBI	CCWGG	2 cut(s)	1295, 1540
BseDI	CCNNGG	5 cut(s)	903, 1173, 1228, 1257, 1538
BseGI	GGATG	4 cut(s)	194, 205, 1117, 1342
BseJI	GATNNNNATC	1 cut(s)	297
BseLI	CCNNNNNNNGG	2 cut(s)	398, 1010
BseMII	CTCAG	3 cut(s)	161, 243, 671
BseNI	ACTGG	4 cut(s)	67, 746, 1352, 1620
Bsh1236I	CGCG	1 cut(s)	966
BshFI	GGCC	3 cut(s)	685, 846, 1293
BshNI	GGYRCC	1 cut(s)	425
BsiHKCI	CYCGRG	1 cut(s)	421
BsiSI	CCGG	1 cut(s)	682
BslFI	GGGAC	1 cut(s)	998
BslI	CCNNNNNNNGG	2 cut(s)	398, 1010
BsmAI	GTCTC	3 cut(s)	150, 1135, 1606
BsmFI	GGGAC	1 cut(s)	998
BsmI	GAATGC	1 cut(s)	1214
BsnI	GGCC	3 cut(s)	685, 846, 1293
BsoBI	CYCGRG	1 cut(s)	421
Bsp1286I	GDGCHC	1 cut(s)	1640
Bsp1407I	TGTACA	1 cut(s)	174
Bsp143I	GATC	6 cut(s)	65, 455, 792, 1081, 1097, 1678
Bsp1720I	GCTNAGC	1 cut(s)	1462
Bsp19I	CCATGG	1 cut(s)	903
Bsp68I	TCGCGA	1 cut(s)	966
BspACI	CCGC	3 cut(s)	1720, 1759, 1762
BspANI	GGCC	3 cut(s)	685, 846, 1293
BspCNI	CTCAG	3 cut(s)	160, 244, 670
BspFNI	CGCG	1 cut(s)	966
BspHI	TCATGA	2 cut(s)	244, 1774
BspLI	GGNNCC	3 cut(s)	427, 645, 1099
BspMI	ACCTGC	1 cut(s)	428
BspOI	GCTAGC	1 cut(s)	447
BspPI	GGATC	5 cut(s)	73, 1089, 1092, 1105, 1673
BspT107I	GGYRCC	1 cut(s)	425
BspTI	CTTAAG	1 cut(s)	307
BsrGI	TGTACA	1 cut(s)	174
BsrI	ACTGG	4 cut(s)	67, 746, 1352, 1620
BssECI	CCNNGG	5 cut(s)	903, 1173, 1228, 1257, 1538
BssMI	GATC	6 cut(s)	65, 455, 792, 1081, 1097, 1678
BssNAI	GTATAC	1 cut(s)	466
BssNI	GRCGYC	1 cut(s)	1279
BssT1I	CCWWGG	3 cut(s)	903, 1228, 1257
Bst1107I	GTATAC	1 cut(s)	466
Bst2UI	CCWGG	2 cut(s)	1295, 1540
Bst4CI	ACNGT	6 cut(s)	96, 208, 382, 733, 1108, 1192
Bst6I	CTCTTC	3 cut(s)	188, 1317, 1431
BstACI	GRCGYC	1 cut(s)	1279
BstAFI	CTTAAG	1 cut(s)	307
BstAUI	TGTACA	1 cut(s)	174
BstBAI	YACGTR	1 cut(s)	740
BstC8I	GCNNGC	1 cut(s)	445
BstDEI	CTNAG	7 cut(s)	9, 147, 252, 657, 1220, 1272, 1462
BstDSI	CCRYGG	1 cut(s)	903
BstF5I	GGATG	4 cut(s)	194, 205, 1117, 1342
BstFNI	CGCG	1 cut(s)	966
BstKTI	GATC	6 cut(s)	68, 458, 795, 1084, 1100, 1681
BstMAI	GTCTC	3 cut(s)	150, 1135, 1606
BstMBI	GATC	6 cut(s)	65, 455, 792, 1081, 1097, 1678
BstMWI	GCNNNNNNNGC	2 cut(s)	434, 1528
BstNI	CCWGG	2 cut(s)	1295, 1540
BstNSI	RCATGY	2 cut(s)	824, 1048
BstSCI	CCNGG	2 cut(s)	1293, 1538
BstSFI	CTRYAG	1 cut(s)	970
BstUI	CGCG	1 cut(s)	966
BstX2I	RGATCY	2 cut(s)	65, 1097
BstXI	CCANNNNNNTGG	2 cut(s)	366, 1108
BstYI	RGATCY	2 cut(s)	65, 1097
BstZ17I	GTATAC	1 cut(s)	466
BsuI	GTATCC	2 cut(s)	394, 777
BsuRI	GGCC	3 cut(s)	685, 846, 1293
BtgI	CCRYGG	1 cut(s)	903
BtsCI	GGATG	4 cut(s)	194, 205, 1117, 1342
BtsI	GCAGTG	1 cut(s)	897
BtsIMutI	CAGTG	5 cut(s)	101, 647, 897, 927, 1113
BtuMI	TCGCGA	1 cut(s)	966
BveI	ACCTGC	1 cut(s)	428
Cac8I	GCNNGC	1 cut(s)	445
CciI	TCATGA	2 cut(s)	244, 1774
Cfr13I	GGNCC	3 cut(s)	743, 845, 1670
CseI	GACGC	1 cut(s)	1268
Csp6I	GTAC	3 cut(s)	175, 389, 761
CviAII	CATG	6 cut(s)	245, 821, 904, 1045, 1361, 1775
CviQI	GTAC	3 cut(s)	175, 389, 761
DdeI	CTNAG	7 cut(s)	9, 147, 252, 657, 1220, 1272, 1462
DpnI	GATC	6 cut(s)	67, 457, 794, 1083, 1099, 1680
DpnII	GATC	6 cut(s)	65, 455, 792, 1081, 1097, 1678
DriI	GACNNNNNGTC	1 cut(s)	1223
EaeI	YGGCCR	1 cut(s)	1291
Eam1104I	CTCTTC	3 cut(s)	188, 1317, 1431
Eam1105I	GACNNNNNGTC	1 cut(s)	1223
EarI	CTCTTC	3 cut(s)	188, 1317, 1431
Eco130I	CCWWGG	3 cut(s)	903, 1228, 1257
Eco24I	GRGCYC	1 cut(s)	1640
Eco47I	GGWCC	2 cut(s)	743, 1670
Eco57I	CTGAAG	3 cut(s)	1228, 1412, 1544
Eco88I	CYCGRG	1 cut(s)	421
EcoRI	GAATTC	3 cut(s)	213, 661, 1354
EcoRII	CCWGG	2 cut(s)	1293, 1538
EcoT14I	CCWWGG	3 cut(s)	903, 1228, 1257
EcoT38I	GRGCYC	1 cut(s)	1640
ErhI	CCWWGG	3 cut(s)	903, 1228, 1257
FaeI	CATG	6 cut(s)	248, 824, 907, 1048, 1364, 1778
FalI	AAGNNNNNCTT	2 cut(s)	317, 349
FaqI	GGGAC	1 cut(s)	998
FatI	CATG	6 cut(s)	244, 820, 903, 1044, 1360, 1774
FauNDI	CATATG	1 cut(s)	673
FblI	GTMKAC	3 cut(s)	100, 465, 491
Fnu4HI	GCNGC	1 cut(s)	1762
FokI	GGATG	4 cut(s)	201, 212, 1124, 1349
FriOI	GRGCYC	1 cut(s)	1640
Fsp4HI	GCNGC	1 cut(s)	1762
FspBI	CTAG	8 cut(s)	17, 287, 444, 798, 1091, 1229, 1319, 1691
GluI	GCNGC	1 cut(s)	1762
HaeIII	GGCC	3 cut(s)	685, 846, 1293
HapII	CCGG	1 cut(s)	682
HgaI	GACGC	1 cut(s)	1268
Hin1I	GRCGYC	1 cut(s)	1279
Hin1II	CATG	6 cut(s)	248, 824, 907, 1048, 1364, 1778
HincII	GTYRAC	1 cut(s)	492
HindII	GTYRAC	1 cut(s)	492
HindIII	AAGCTT	2 cut(s)	574, 1529
HpaII	CCGG	1 cut(s)	682
HphI	GGTGA	1 cut(s)	1299
Hpy166II	GTNNAC	9 cut(s)	101, 175, 378, 466, 492, 743, 997, 1400, 1670
Hpy188III	TCNNGA	9 cut(s)	69, 245, 287, 965, 1161, 1430, 1586, 1644, 1775
Hpy8I	GTNNAC	9 cut(s)	101, 175, 378, 466, 492, 743, 997, 1400, 1670
Hpy99I	CGWCG	1 cut(s)	1284
HpyAV	CCTTC	3 cut(s)	425, 1625, 1735
HpyCH4III	ACNGT	6 cut(s)	96, 208, 382, 733, 1108, 1192
HpyCH4IV	ACGT	2 cut(s)	739, 920
HpyCH4V	TGCA	7 cut(s)	23, 53, 128, 1048, 1212, 1364, 1685
HpyF10VI	GCNNNNNNNGC	2 cut(s)	434, 1528
HpyF3I	CTNAG	7 cut(s)	9, 147, 252, 657, 1220, 1272, 1462
HpySE526I	ACGT	2 cut(s)	739, 920
Hsp92I	GRCGYC	1 cut(s)	1279
Hsp92II	CATG	6 cut(s)	248, 824, 907, 1048, 1364, 1778
Kzo9I	GATC	6 cut(s)	65, 455, 792, 1081, 1097, 1678
LmnI	GCTCC	5 cut(s)	649, 817, 1432, 1519, 1741
LweI	GCATC	3 cut(s)	62, 137, 1119
MaeI	CTAG	8 cut(s)	17, 287, 444, 798, 1091, 1229, 1319, 1691
MaeII	ACGT	2 cut(s)	739, 920
MaeIII	GTNAC	4 cut(s)	136, 270, 883, 1086
MalI	GATC	6 cut(s)	67, 457, 794, 1083, 1099, 1680
MboI	GATC	6 cut(s)	65, 455, 792, 1081, 1097, 1678
MflI	RGATCY	2 cut(s)	65, 1097
MhlI	GDGCHC	1 cut(s)	1640
MlsI	TGGCCA	1 cut(s)	1293
MluNI	TGGCCA	1 cut(s)	1293
MlyI	GAGTC	5 cut(s)	14, 56, 278, 1151, 1233
MmeI	TCCRAC	2 cut(s)	371, 1462
Mox20I	TGGCCA	1 cut(s)	1293
MroXI	GAANNNNTTC	3 cut(s)	591, 1532, 1751
MscI	TGGCCA	1 cut(s)	1293
MseI	TTAA	4 cut(s)	308, 324, 774, 1029
MslI	CAYNNNNRTG	3 cut(s)	902, 1773, 1776
Msp20I	TGGCCA	1 cut(s)	1293
MspCI	CTTAAG	1 cut(s)	307
MspI	CCGG	1 cut(s)	682
MspR9I	CCNGG	2 cut(s)	1295, 1540
Mva1269I	GAATGC	1 cut(s)	1214
MvaI	CCWGG	2 cut(s)	1295, 1540
MvnI	CGCG	1 cut(s)	966
MwoI	GCNNNNNNNGC	2 cut(s)	434, 1528
NcoI	CCATGG	1 cut(s)	903
NdeI	CATATG	1 cut(s)	673
NdeII	GATC	6 cut(s)	65, 455, 792, 1081, 1097, 1678
NheI	GCTAGC	1 cut(s)	443
NlaIII	CATG	6 cut(s)	248, 824, 907, 1048, 1364, 1778
NlaIV	GGNNCC	3 cut(s)	427, 645, 1099
NmeAIII	GCCGAG	1 cut(s)	1198
NmuCI	GTSAC	2 cut(s)	270, 1086
NruI	TCGCGA	1 cut(s)	966
NspI	RCATGY	2 cut(s)	824, 1048
PagI	TCATGA	2 cut(s)	244, 1774
PaqCI	CACCTGC	1 cut(s)	428
PctI	GAATGC	1 cut(s)	1214
PdmI	GAANNNNTTC	3 cut(s)	591, 1532, 1751
PfeI	GAWTC	6 cut(s)	248, 587, 652, 932, 961, 1385
PflFI	GACNNNGTC	1 cut(s)	206
PflMI	CCANNNNNTGG	1 cut(s)	398
PkrI	GCNGC	1 cut(s)	1763
PleI	GAGTC	5 cut(s)	13, 55, 277, 1151, 1232
PpsI	GAGTC	5 cut(s)	13, 55, 277, 1151, 1232
Ppu21I	YACGTR	1 cut(s)	740
PshBI	ATTAAT	2 cut(s)	774, 1029
PsiI	TTATAA	2 cut(s)	615, 1421
Psp1406I	AACGTT	1 cut(s)	920
Psp6I	CCWGG	2 cut(s)	1293, 1538
PspGI	CCWGG	2 cut(s)	1293, 1538
PspN4I	GGNNCC	3 cut(s)	427, 645, 1099
PspPI	GGNCC	3 cut(s)	743, 845, 1670
PsuI	RGATCY	2 cut(s)	65, 1097
PsyI	GACNNNGTC	1 cut(s)	206
RruI	TCGCGA	1 cut(s)	966
RsaI	GTAC	3 cut(s)	176, 390, 762
RsaNI	GTAC	3 cut(s)	175, 389, 761
RseI	CAYNNNNRTG	3 cut(s)	902, 1773, 1776
SalI	GTCGAC	1 cut(s)	490
SaqAI	TTAA	4 cut(s)	308, 324, 774, 1029
SatI	GCNGC	1 cut(s)	1762
Sau3AI	GATC	6 cut(s)	65, 455, 792, 1081, 1097, 1678
Sau96I	GGNCC	3 cut(s)	743, 845, 1670
SchI	GAGTC	5 cut(s)	14, 56, 278, 1151, 1233
ScrFI	CCNGG	2 cut(s)	1295, 1540
SduI	GDGCHC	1 cut(s)	1640
SfaNI	GCATC	3 cut(s)	62, 137, 1119
SfcI	CTRYAG	1 cut(s)	970
SinI	GGWCC	2 cut(s)	743, 1670
SmiMI	CAYNNNNRTG	3 cut(s)	902, 1773, 1776
SmlI	CTYRAG	2 cut(s)	307, 1159
SmoI	CTYRAG	2 cut(s)	307, 1159
SpeI	ACTAGT	2 cut(s)	16, 1690
SsiI	CCGC	3 cut(s)	1720, 1759, 1762
SspMI	CTAG	8 cut(s)	17, 287, 444, 798, 1091, 1229, 1319, 1691
StyD4I	CCNGG	2 cut(s)	1293, 1538
StyI	CCWWGG	3 cut(s)	903, 1228, 1257
TaaI	ACNGT	6 cut(s)	96, 208, 382, 733, 1108, 1192
TaiI	ACGT	2 cut(s)	742, 923
TaqI	TCGA	2 cut(s)	267, 491
TaqII	GACCGA	1 cut(s)	1074
TatI	WGTACW	2 cut(s)	174, 760
TauI	GCSGC	1 cut(s)	1764
TfiI	GAWTC	6 cut(s)	248, 587, 652, 932, 961, 1385
Tru1I	TTAA	4 cut(s)	308, 324, 774, 1029
Tru9I	TTAA	4 cut(s)	308, 324, 774, 1029
TscAI	CASTG	5 cut(s)	101, 654, 904, 934, 1113
TseFI	GTSAC	2 cut(s)	270, 1086
Tsp45I	GTSAC	2 cut(s)	270, 1086
TspDTI	ATGAA	6 cut(s)	233, 243, 771, 1200, 1221, 1583
TspGWI	ACGGA	2 cut(s)	376, 1664
TspRI	CASTG	5 cut(s)	101, 654, 904, 934, 1113
Tth111I	GACNNNGTC	1 cut(s)	206
Van91I	CCANNNNNTGG	1 cut(s)	398
Vha464I	CTTAAG	1 cut(s)	307
VpaK11BI	GGWCC	2 cut(s)	743, 1670
VspI	ATTAAT	2 cut(s)	774, 1029
XapI	RAATTY	6 cut(s)	213, 661, 1064, 1235, 1354, 1449
XbaI	TCTAGA	1 cut(s)	286
XceI	RCATGY	2 cut(s)	824, 1048
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1007
XmaJI	CCTAGG	1 cut(s)	1228
XmiI	GTMKAC	3 cut(s)	100, 465, 491
XmnI	GAANNNNTTC	3 cut(s)	591, 1532, 1751
XspI	CTAG	8 cut(s)	17, 287, 444, 798, 1091, 1229, 1319, 1691

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.