Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr7C

Orthogroup ID

OG0001301

Physical Location & Seq

Genomic Coordinates Forward (+)

7633623 .. 7640628

Gene Structure 7006 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh7CG101700.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2541 bp

ATGGCGGTTGAAGCTTGTTGCTTACGGCTTCTCGCGGTACTAATTGTGTTTCTAAATGTAGAATCCAAGTTCATGGCTTACAATACAACGTCGCAGATTGTCCCGGGAAAGCTTAACGTTCATTTAGTTCCTCACACCCATGACGATGTCGGCTGGCGGAAAACCGTTGACCAGTACTACACCGGTGCCAATAATTCTCTCCTGGACGCTCCCGCTTGTGTTCGAAACGTGTTGGATTCTTTAGTTCCCGCATTGTTGGCCGATAAGAACCGCAAGTTCATATATGCTGAGCAGGCATTTTTTCAACTATGGTGGAGAGAACAGAGCGAGGCGATCCAAGACACAGTCAAGCAGCTAGTCGGCTCTGGCCAACTGGAATTCATAAATGGGGGGATGTGCATGCAAGATGAGGCTGCTACGCATTACATTGATATGATTGATCAGACGACTCTAGGGCATCGATTTATTAACCAAGAGTTCAATGTGACTCCAAGAGTTGGCTGGCAAATCGATTCGTTTGGACATTCTTCTGTGCAGGCTTACCTTTTGGCGGCTGAGGTTGGCTTTGATTCCCTATTTTTTGGACGAATCGACTACCAAGATATAGCTACGAGGAAAAATGAGAAAAGCCTTGAGGTTGTGTGGCGGGGTTCTAAGAGTCTCGGTTCATCTGCACAGATTTTTGCTGGTGCATTGCCTACGCTATATGTTCCTCCTTCTCATAATTTCTACTTTGACACTGATTACAACCTTGTCCCTCTTGTACAAGATGATATAAATCTTGGTGACTACAATGTGGCAGATCGTGTTAATGATTTTGTATCTGAAGCAATATCACAAGCAAACATTACTCGTACAAATCATATCATGTGGACCATGGGAAAGGATTTCGCGTATCAATATGCTAATTCATGGTTCAGTCAGATGGACAAATTCATTCATCATGTGAATCAACACGTAGCTGATGATTATACAAAACGACTTTCAATAGGTTACAAGGAGGCTGAGAAGGTTGTTGCAGAATCACTTTCTTGCTTGATAAGTTCAAGATTAAGCACTGGTTGCAAGAGTGTAGTAACAAAGTTTCAACAGTGTCCACTTCTGAATATTAGCTATTGCCCCCCGTCAGAAGTTGATCTTTCAAAGGGAAAACACCTGGTTATTGTTGTCTATAACCCTCTGGGATGGAAAAGAGAGGATGTGATAAAGATTCCTGTTGTCAGTGAAAAAGTCACTGTAAAGGACTCCACCGGAAAGGAAATTGAATCACAGATTCTACCGCTGCTTAATGCATCTGTCAGCATAAGAAATGACCATGTTAAGGCATATTTGGGTATAGCACCGAGTGTGACCACAAGTTATTGGCTTGCATTTTCAGCAACTGTACCACCTCTTGGTTTTAGCACTTACATGGTCTCAAGTGCTGCCACACAGACAGCTACTACTTCAGAGAGACATACAGTGTACAAGACAGAAACAAGTCAAAATGAAACAATAAAAGTTGGGCCTGGAAACTTGAAACTCATTTATTCTGGAAACGATGGAAAACTGATTCAGTACACAAACAGCAGAAGCTCGGTCAAAGAGTTGGTAATGCAATCATTTAGCTACTACCCTGGACATGATGGAAGAGTGGAGTATTACGGTGAGGATGCAAATCCGCATTCTCAGGCCTCAGGAGCATATGTCTTCCGTCCTAATGGTACATATCCCATTAAATCAGAAGGGCAGGTTTCTTTGACTATTTTAAGGGGACCATTGTTGGATGAAATACATGAAAGGATCAACTCTTGGATATATCAGGTCACTAGAGTGTACAGGGAAAAAGAGCATGCTGAGATTGAATTTACTATAGGGCCTATACCAGTTGATGATGGAATAGGCAAAGAGATTGTAACTAAGATTACAACCAGCATGAGAACCAACAAACAATTCTACACAGATTCTAACGGGCGCGATTTTATTCAAAGAATTCGAGACTACAGAAAAGACTGGGACCTGGAAGTAAACCAACCTGTCGCAGGAAACTATTATCCGATTAATCTGGGAATCTATACGAAAGATAACAACACAGAGCTGTCAGTATTAGTGGATAGATCTGTAGGGGGATCCAGCATTGTGGACGGGCAATTGGAACTGATGCTTCATAGGAGATTGCTTGCAGATGATGAAAACGGTATTCTAGAACAACTAGATGAAACGGTGTGCATTGAACATGATTGCAAAGGACTAACAATTACAGGAAAGTACCACCTGAGAATTGATCCTTTAGGAGAGGGTGCTAAGTGGCGTCGATCATTTGGTCAGGAGATATATTCTCCACTTCTATTAGCCTTCACAGAACAAAATGGAGATGACTGGACAAACTCTCATGTCACAACCTTTTCGGGAATGGATCCTTCCTACACTTTACCTGATAATGTTGCAATTATAACTCTCCAGGAGCTGGAAGATGGGAAAGTTCTCTTTCGCCTGGCGCATTTATACGAGGTTTTGGTTTCTTTCTTAGTCATGCTTGCTAAATTTAGTTGCCATCTATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000323 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005764 GO:0005773 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044444 GO:0044464

KEGG Pathways

Metabolic & Signaling

ko00511 map00511

Pfam Domains

Protein Families

Alpha-mann_mid Glyco_hydro_38 Glyco_hydro_38C

Protein Analysis

846

Amino Acids

95.28

Weight (kDa)

5.53

Isoelectric Point (pI)

33.59

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Glyco_hydro_38N	PF01074	39 - 329	1.9e-72	Glycosyl hydrolases family 38 N-terminal domain
Laman-like_dom	PF21260	449 - 472	5.3e-09	Lysosomal alpha-mannosidase-like, central domain
Glyco_hydro_38C	PF07748	503 - 724	1.4e-42	Glycosyl hydrolases family 38 C-terminal domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001301)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G13980 AT5G13980 AT5G13980
fragaria_vesca	FvH4_5g09420 FvH4_5g09421 FvH4_6g54272 FvH4_6g54272 FvH4_6g54272 FvH4_6g54272 FvH4_6g54272
malus_domestica	MD06G1131600.v1.1 MD09G1002900.v1.1 MD17G1007000.v1.1
prunus_persica	Prupe.3G313300_v2.0.a1 Prupe.3G313300_v2.0.a1 Prupe.3G313300_v2.0.a1 Prupe.3G313300_v2.0.a1 Prupe.5G142600_v2.0.a1 Prupe.5G142600_v2.0.a1
pyrus_communis	pycom06g12300 pycom06g12310 pycom111g00240 pycom17g00260
rosa_chinensis	RchiOBHm_Chr2g0176471 RchiOBHm_Chr2g0176481 RchiOBHm_Chr7g0188771 RchiOBHm_Chr7g0188781
rosa_laevigata	RLG00000004661 RLG00000004662 RLG00000022416
rosa_multiflora	Rmu_sc0000303.1_g000057 Rmu_sc0003642.1_g000008 Rmu_sc0011904.1_g000012
rosa_roxburghii	Rroxscaffold_2G00076370 Rroxscaffold_3G00266040 Rroxscaffold_3G00266050
rosa_rugosa	Rorug02G0595000 Rorug06G0493700
rosa_samantha	Rh2AG673300 Rh2BG684600 Rh2CG647400 Rh2DG698200 Rh7AG098300 Rh7AG098400 Rh7BG099900 Rh7BG100200 Rh7CG101600 Rh7CG101700 Rh7DG100100 Rh7DG100200
rosa_wichuraiana	Rw0G010390 Rw2G055220 Rw7G008480 Rw7G008490

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	2432
Acc36I	ACCTGC	1 cut(s)	1720
AccB1I	GGYRCC	1 cut(s)	185
AccB7I	CCANNNNNTGG	3 cut(s)	497, 1394, 2446
AccII	CGCG	3 cut(s)	35, 893, 1956
AclI	AACGTT	1 cut(s)	117
AclWI	GGATC	7 cut(s)	328, 1790, 2103, 2116, 2258, 2390, 2403
AcoI	YGGCCR	2 cut(s)	258, 367
AcsI	RAATTY	5 cut(s)	377, 932, 1844, 1971, 2522
AcuI	CTGAAG	2 cut(s)	846, 1431
AcyI	GRCGYC	1 cut(s)	2290
AdeI	CACNNNGTG	1 cut(s)	1346
AfiI	CCNNNNNNNGG	6 cut(s)	497, 550, 1321, 1394, 2021, 2446
AflIII	ACRYGT	2 cut(s)	228, 955
AgeI	ACCGGT	1 cut(s)	182
AjnI	CCWGG	7 cut(s)	201, 1155, 1507, 1615, 1998, 2439, 2472
AjuI	GAANNNNNNNTTGG	2 cut(s)	1916, 1948
AleI	CACNNNNGTG	1 cut(s)	1811
Alw26I	GTCTC	4 cut(s)	665, 1420, 1447, 1971
AlwI	GGATC	7 cut(s)	328, 1790, 2103, 2116, 2258, 2390, 2403
AlwNI	CAGNNNCTG	2 cut(s)	1382, 2446
Ama87I	CYCGRG	1 cut(s)	103
AoxI	GGCC	5 cut(s)	258, 367, 1505, 1671, 1856
ApeKI	GCWGC	4 cut(s)	352, 413, 1282, 1424
ApoI	RAATTY	5 cut(s)	377, 932, 1844, 1971, 2522
AseI	ATTAAT	1 cut(s)	2040
AsiGI	ACCGGT	1 cut(s)	182
AspLEI	GCGC	2 cut(s)	1956, 2479
AspS9I	GGNCC	5 cut(s)	873, 1505, 1754, 1856, 1996
AsuC2I	CCSGG	2 cut(s)	104, 105
AsuHPI	GGTGA	2 cut(s)	797, 1658
AsuII	TTCGAA	1 cut(s)	223
AvaI	CYCGRG	1 cut(s)	103
AvaII	GGWCC	3 cut(s)	873, 1754, 1996
AxyI	CCTNAGG	1 cut(s)	1675
BalI	TGGCCA	1 cut(s)	369
BamHI	GGATCC	2 cut(s)	2108, 2395
BanI	GGYRCC	1 cut(s)	185
BbsI	GAAGAC	1 cut(s)	1681
BbvCI	CCTCAGC	1 cut(s)	555
BbvI	GCAGC	4 cut(s)	364, 400, 1269, 1411
BccI	CCATC	6 cut(s)	919, 1179, 1535, 1619, 1868, 2447
BceAI	ACGGC	1 cut(s)	41
BciT130I	CCWGG	7 cut(s)	203, 1157, 1509, 1617, 2000, 2441, 2474
BclI	TGATCA	1 cut(s)	439
BcnI	CCSGG	2 cut(s)	104, 105
BcoDI	GTCTC	4 cut(s)	665, 1420, 1447, 1971
BfaI	CTAG	5 cut(s)	356, 452, 1809, 2183, 2192
BfmI	CTRYAG	3 cut(s)	1851, 1981, 2100
BfuAI	ACCTGC	1 cut(s)	1720
BglII	AGATCT	1 cut(s)	2096
BisI	GCNGC	5 cut(s)	353, 414, 552, 1283, 1425
BlpI	GCTNAGC	1 cut(s)	288
BlsI	GCNGC	5 cut(s)	354, 415, 553, 1284, 1426
BmcAI	AGTACT	1 cut(s)	176
Bme1390I	CCNGG	9 cut(s)	104, 105, 203, 1157, 1509, 1617, 2000, 2441, 2474
Bme18I	GGWCC	3 cut(s)	873, 1754, 1996
BmeT110I	CYCGRG	1 cut(s)	103
BmgT120I	GGNCC	5 cut(s)	873, 1505, 1754, 1856, 1996
BmiI	GGNNCC	5 cut(s)	187, 1755, 1997, 2110, 2397
BmrFI	CCNGG	9 cut(s)	104, 105, 203, 1157, 1509, 1617, 2000, 2441, 2474
BmrI	ACTGGG	1 cut(s)	2002
BmsI	GCATC	4 cut(s)	466, 1301, 1642, 2130
BmuI	ACTGGG	1 cut(s)	2002
BpiI	GAAGAC	1 cut(s)	1681
BpmI	CTGGAG	1 cut(s)	2423
Bpu10I	CCTNAGC	1 cut(s)	555
Bpu1102I	GCTNAGC	1 cut(s)	288
Bpu14I	TTCGAA	1 cut(s)	223
BpuEI	CTTGAG	2 cut(s)	653, 1402
BpuMI	CCSGG	2 cut(s)	104, 105
Bsa29I	ATCGAT	2 cut(s)	460, 510
BsaAI	YACGTR	1 cut(s)	958
BsaBI	GATNNNNATC	2 cut(s)	777, 1656
BsaHI	GRCGYC	1 cut(s)	2290
BsaI	GGTCTC	1 cut(s)	1420
BsaJI	CCNNGG	3 cut(s)	103, 876, 1615
BsaWI	WCCGGW	2 cut(s)	182, 1250
BsaXI	ACNNNNNCTCC	2 cut(s)	1671, 1701
Bsc4I	CCNNNNNNNGG	6 cut(s)	497, 550, 1321, 1394, 2021, 2446
Bse118I	RCCGGY	1 cut(s)	182
Bse1I	ACTGG	6 cut(s)	172, 378, 1063, 1865, 1997, 2363
Bse21I	CCTNAGG	1 cut(s)	1675
Bse3DI	GCAATG	1 cut(s)	692
Bse8I	GATNNNNATC	2 cut(s)	777, 1656
BseBI	CCWGG	7 cut(s)	203, 1157, 1509, 1617, 2000, 2441, 2474
BseCI	ATCGAT	2 cut(s)	460, 510
BseDI	CCNNGG	3 cut(s)	103, 876, 1615
BseGI	GGATG	5 cut(s)	399, 1190, 1204, 1657, 1771
BseJI	GATNNNNATC	2 cut(s)	777, 1656
BseLI	CCNNNNNNNGG	6 cut(s)	497, 550, 1321, 1394, 2021, 2446
BseMI	GCAATG	1 cut(s)	692
BseMII	CTCAG	7 cut(s)	279, 546, 996, 1682, 1689, 1827, 2246
BseNI	ACTGG	6 cut(s)	172, 378, 1063, 1865, 1997, 2363
BseXI	GCAGC	4 cut(s)	364, 400, 1269, 1411
BsgI	GTGCAG	2 cut(s)	554, 657
Bsh1236I	CGCG	3 cut(s)	35, 893, 1956
BshFI	GGCC	5 cut(s)	260, 369, 1507, 1673, 1858
BshNI	GGYRCC	1 cut(s)	185
BshTI	ACCGGT	1 cut(s)	182
BshVI	ATCGAT	2 cut(s)	460, 510
BsiHKCI	CYCGRG	1 cut(s)	103
BsiSI	CCGG	3 cut(s)	104, 183, 1251
BslFI	GGGAC	4 cut(s)	86, 740, 1767, 2009
BslI	CCNNNNNNNGG	6 cut(s)	497, 550, 1321, 1394, 2021, 2446
BsmAI	GTCTC	4 cut(s)	665, 1420, 1447, 1971
BsmFI	GGGAC	4 cut(s)	86, 740, 1767, 2009
BsmI	GAATGC	1 cut(s)	1663
BsnI	GGCC	5 cut(s)	260, 369, 1507, 1673, 1858
Bso31I	GGTCTC	1 cut(s)	1420
BsoBI	CYCGRG	1 cut(s)	103
Bsp119I	TTCGAA	1 cut(s)	223
Bsp1407I	TGTACA	3 cut(s)	763, 1464, 1815
Bsp1720I	GCTNAGC	1 cut(s)	288
Bsp19I	CCATGG	1 cut(s)	876
BspANI	GGCC	5 cut(s)	260, 369, 1507, 1673, 1858
BspCNI	CTCAG	7 cut(s)	280, 547, 997, 1681, 1688, 1828, 2247
BspDI	ATCGAT	2 cut(s)	460, 510
BspFNI	CGCG	3 cut(s)	35, 893, 1956
BspLI	GGNNCC	5 cut(s)	187, 1755, 1997, 2110, 2397
BspMI	ACCTGC	1 cut(s)	1720
BspPI	GGATC	7 cut(s)	328, 1790, 2103, 2116, 2258, 2390, 2403
BspT104I	TTCGAA	1 cut(s)	223
BspT107I	GGYRCC	1 cut(s)	185
BspTNI	GGTCTC	1 cut(s)	1420
BsrDI	GCAATG	1 cut(s)	692
BsrFI	RCCGGY	1 cut(s)	182
BsrGI	TGTACA	3 cut(s)	763, 1464, 1815
BsrI	ACTGG	6 cut(s)	172, 378, 1063, 1865, 1997, 2363
BssAI	RCCGGY	1 cut(s)	182
BssECI	CCNNGG	3 cut(s)	103, 876, 1615
BssNI	GRCGYC	1 cut(s)	2290
BssT1I	CCWWGG	1 cut(s)	876
Bst2UI	CCWGG	7 cut(s)	203, 1157, 1509, 1617, 2000, 2441, 2474
Bst4CI	ACNGT	9 cut(s)	166, 346, 1092, 1237, 1384, 1462, 1646, 2177, 2203
Bst6I	CTCTTC	1 cut(s)	1624
BstACI	GRCGYC	1 cut(s)	2290
BstAPI	GCANNNNNTGC	1 cut(s)	1062
BstAUI	TGTACA	3 cut(s)	763, 1464, 1815
BstBAI	YACGTR	1 cut(s)	958
BstBI	TTCGAA	1 cut(s)	223
BstC8I	GCNNGC	9 cut(s)	155, 294, 401, 503, 537, 1368, 1833, 2160, 2517
BstDSI	CCRYGG	1 cut(s)	876
BstENI	CCTNNNNNAGG	1 cut(s)	2019
BstF5I	GGATG	5 cut(s)	399, 1190, 1204, 1657, 1771
BstFNI	CGCG	3 cut(s)	35, 893, 1956
BstHHI	GCGC	2 cut(s)	1956, 2479
BstMAI	GTCTC	4 cut(s)	665, 1420, 1447, 1971
BstMWI	GCNNNNNNNGC	6 cut(s)	11, 257, 293, 1062, 1376, 1679
BstNI	CCWGG	7 cut(s)	203, 1157, 1509, 1617, 2000, 2441, 2474
BstNSI	RCATGY	2 cut(s)	403, 1835
BstSCI	CCNGG	9 cut(s)	102, 103, 201, 1155, 1507, 1615, 1998, 2439, 2472
BstSFI	CTRYAG	3 cut(s)	1851, 1981, 2100
BstUI	CGCG	3 cut(s)	35, 893, 1956
BstV1I	GCAGC	4 cut(s)	364, 400, 1269, 1411
BstV2I	GAAGAC	1 cut(s)	1681
BstX2I	RGATCY	3 cut(s)	2096, 2108, 2395
BstXI	CCANNNNNNTGG	2 cut(s)	73, 2119
BstYI	RGATCY	3 cut(s)	2096, 2108, 2395
Bsu15I	ATCGAT	2 cut(s)	460, 510
Bsu36I	CCTNAGG	1 cut(s)	1675
BsuRI	GGCC	5 cut(s)	260, 369, 1507, 1673, 1858
BsuTUI	ATCGAT	2 cut(s)	460, 510
BtgI	CCRYGG	1 cut(s)	876
BtsCI	GGATG	5 cut(s)	399, 1190, 1204, 1657, 1771
BtsIMutI	CAGTG	6 cut(s)	738, 1056, 1097, 1228, 1233, 1467
BveI	ACCTGC	1 cut(s)	1720
Cac8I	GCNNGC	9 cut(s)	155, 294, 401, 503, 537, 1368, 1833, 2160, 2517
CaiI	CAGNNNCTG	2 cut(s)	1382, 2446
CfoI	GCGC	2 cut(s)	1956, 2479
Cfr10I	RCCGGY	1 cut(s)	182
Cfr13I	GGNCC	5 cut(s)	873, 1505, 1754, 1856, 1996
Cfr9I	CCCGGG	1 cut(s)	103
ClaI	ATCGAT	2 cut(s)	460, 510
CseI	GACGC	2 cut(s)	215, 2279
CsiI	ACCWGGT	1 cut(s)	1155
CspAI	ACCGGT	1 cut(s)	182
CspCI	CAANNNNNGTGG	2 cut(s)	293, 328
DraIII	CACNNNGTG	1 cut(s)	1346
EaeI	YGGCCR	2 cut(s)	258, 367
Eam1104I	CTCTTC	1 cut(s)	1624
EarI	CTCTTC	1 cut(s)	1624
EciI	GGCGGA	1 cut(s)	172
Eco130I	CCWWGG	1 cut(s)	876
Eco147I	AGGCCT	1 cut(s)	1673
Eco31I	GGTCTC	1 cut(s)	1420
Eco47I	GGWCC	3 cut(s)	873, 1754, 1996
Eco57I	CTGAAG	2 cut(s)	846, 1431
Eco81I	CCTNAGG	1 cut(s)	1675
Eco88I	CYCGRG	1 cut(s)	103
EcoNI	CCTNNNNNAGG	1 cut(s)	2019
EcoO109I	RGGNCCY	2 cut(s)	1856, 1996
EcoRI	GAATTC	2 cut(s)	377, 1971
EcoRII	CCWGG	7 cut(s)	201, 1155, 1507, 1615, 1998, 2439, 2472
EcoT14I	CCWWGG	1 cut(s)	876
EcoT22I	ATGCAT	1 cut(s)	1294
ErhI	CCWWGG	1 cut(s)	876
FalI	AAGNNNNNCTT	2 cut(s)	1122, 1154
FaqI	GGGAC	4 cut(s)	86, 740, 1767, 2009
FauI	CCCGC	3 cut(s)	220, 256, 639
FauNDI	CATATG	1 cut(s)	1684
FbaI	TGATCA	1 cut(s)	439
Fnu4HI	GCNGC	5 cut(s)	353, 414, 552, 1283, 1425
FokI	GGATG	5 cut(s)	406, 1197, 1211, 1664, 1778
Fsp4HI	GCNGC	5 cut(s)	353, 414, 552, 1283, 1425
FspBI	CTAG	5 cut(s)	356, 452, 1809, 2183, 2192
GlaI	GCGC	2 cut(s)	1955, 2478
GluI	GCNGC	5 cut(s)	353, 414, 552, 1283, 1425
GsuI	CTGGAG	1 cut(s)	2423
HaeIII	GGCC	5 cut(s)	260, 369, 1507, 1673, 1858
HapII	CCGG	3 cut(s)	104, 183, 1251
HgaI	GACGC	2 cut(s)	215, 2279
HhaI	GCGC	2 cut(s)	1956, 2479
Hin1I	GRCGYC	1 cut(s)	2290
Hin6I	GCGC	2 cut(s)	1954, 2477
HinP1I	GCGC	2 cut(s)	1954, 2477
HincII	GTYRAC	1 cut(s)	169
HindII	GTYRAC	1 cut(s)	169
HindIII	AAGCTT	2 cut(s)	12, 110
HpaII	CCGG	3 cut(s)	104, 183, 1251
HphI	GGTGA	2 cut(s)	797, 1658
Hpy166II	GTNNAC	8 cut(s)	169, 873, 1097, 1465, 1560, 1816, 2008, 2122
Hpy188I	TCNGA	8 cut(s)	444, 826, 924, 1104, 1129, 1450, 1723, 2037
Hpy188III	TCNNGA	7 cut(s)	1047, 1533, 1677, 1976, 2183, 2306, 2388
Hpy8I	GTNNAC	8 cut(s)	169, 873, 1097, 1465, 1560, 1816, 2008, 2122
Hpy99I	CGWCG	2 cut(s)	94, 2295
HpyAV	CCTTC	5 cut(s)	726, 1003, 1718, 2344, 2409
HpyCH4III	ACNGT	9 cut(s)	166, 346, 1092, 1237, 1384, 1462, 1646, 2177, 2203
HpyCH4IV	ACGT	4 cut(s)	89, 117, 228, 957
HpyF10VI	GCNNNNNNNGC	6 cut(s)	11, 257, 293, 1062, 1376, 1679
HpySE526I	ACGT	4 cut(s)	89, 117, 228, 957
Hsp92I	GRCGYC	1 cut(s)	2290
HspAI	GCGC	2 cut(s)	1954, 2477
Ksp22I	TGATCA	1 cut(s)	439
LmnI	GCTCC	3 cut(s)	214, 1679, 2443
Lsp1109I	GCAGC	4 cut(s)	364, 400, 1269, 1411
LweI	GCATC	4 cut(s)	466, 1301, 1642, 2130
MabI	ACCWGGT	1 cut(s)	1155
MaeI	CTAG	5 cut(s)	356, 452, 1809, 2183, 2192
MaeII	ACGT	4 cut(s)	89, 117, 228, 957
MaeIII	GTNAC	9 cut(s)	484, 785, 992, 1075, 1231, 1348, 1804, 1894, 2374
MboII	GAAGA	4 cut(s)	519, 1641, 1681, 2462
MfeI	CAATTG	1 cut(s)	2129
MflI	RGATCY	3 cut(s)	2096, 2108, 2395
MlsI	TGGCCA	1 cut(s)	369
MluNI	TGGCCA	1 cut(s)	369
MlyI	GAGTC	4 cut(s)	442, 481, 667, 1238
MmeI	TCCRAC	2 cut(s)	213, 1743
Mox20I	TGGCCA	1 cut(s)	369
Mph1103I	ATGCAT	1 cut(s)	1294
MscI	TGGCCA	1 cut(s)	369
MseI	TTAA	9 cut(s)	114, 468, 810, 1052, 1287, 1320, 1716, 1748, 2040
MslI	CAYNNNNRTG	5 cut(s)	138, 144, 431, 1409, 1811
Msp20I	TGGCCA	1 cut(s)	369
MspA1I	CMGCKG	1 cut(s)	1282
MspI	CCGG	3 cut(s)	104, 183, 1251
MspR9I	CCNGG	9 cut(s)	104, 105, 203, 1157, 1509, 1617, 2000, 2441, 2474
MunI	CAATTG	1 cut(s)	2129
Mva1269I	GAATGC	1 cut(s)	1663
MvaI	CCWGG	7 cut(s)	203, 1157, 1509, 1617, 2000, 2441, 2474
MvnI	CGCG	3 cut(s)	35, 893, 1956
MwoI	GCNNNNNNNGC	6 cut(s)	11, 257, 293, 1062, 1376, 1679
NciI	CCSGG	2 cut(s)	104, 105
NcoI	CCATGG	1 cut(s)	876
NdeI	CATATG	1 cut(s)	1684
NlaIV	GGNNCC	5 cut(s)	187, 1755, 1997, 2110, 2397
NmuCI	GTSAC	6 cut(s)	484, 785, 1231, 1348, 1804, 2374
NsiI	ATGCAT	1 cut(s)	1294
NspI	RCATGY	2 cut(s)	403, 1835
NspV	TTCGAA	1 cut(s)	223
OliI	CACNNNNGTG	1 cut(s)	1811
PaeI	GCATGC	2 cut(s)	403, 1835
PceI	AGGCCT	1 cut(s)	1673
PctI	GAATGC	1 cut(s)	1663
PflFI	GACNNNGTC	2 cut(s)	146, 344
PflMI	CCANNNNNTGG	3 cut(s)	497, 1394, 2446
PfoI	TCCNGGA	2 cut(s)	201, 2439
PinAI	ACCGGT	1 cut(s)	182
PkrI	GCNGC	5 cut(s)	354, 415, 553, 1284, 1426
PleI	GAGTC	4 cut(s)	442, 481, 666, 1238
PpsI	GAGTC	4 cut(s)	442, 481, 666, 1238
Ppu21I	YACGTR	1 cut(s)	958
PpuMI	RGGWCCY	1 cut(s)	1996
PshBI	ATTAAT	1 cut(s)	2040
PsiI	TTATAA	1 cut(s)	2432
Psp1406I	AACGTT	1 cut(s)	117
Psp5II	RGGWCCY	1 cut(s)	1996
Psp6I	CCWGG	7 cut(s)	201, 1155, 1507, 1615, 1998, 2439, 2472
PspGI	CCWGG	7 cut(s)	201, 1155, 1507, 1615, 1998, 2439, 2472
PspN4I	GGNNCC	5 cut(s)	187, 1755, 1997, 2110, 2397
PspPI	GGNCC	5 cut(s)	873, 1505, 1754, 1856, 1996
PspPPI	RGGWCCY	1 cut(s)	1996
PstNI	CAGNNNCTG	2 cut(s)	1382, 2446
PsuI	RGATCY	3 cut(s)	2096, 2108, 2395
PsyI	GACNNNGTC	2 cut(s)	146, 344
RseI	CAYNNNNRTG	5 cut(s)	138, 144, 431, 1409, 1811
SaqAI	TTAA	9 cut(s)	114, 468, 810, 1052, 1287, 1320, 1716, 1748, 2040
SatI	GCNGC	5 cut(s)	353, 414, 552, 1283, 1425
Sau96I	GGNCC	5 cut(s)	873, 1505, 1754, 1856, 1996
ScaI	AGTACT	1 cut(s)	176
SchI	GAGTC	4 cut(s)	442, 481, 667, 1238
ScrFI	CCNGG	9 cut(s)	104, 105, 203, 1157, 1509, 1617, 2000, 2441, 2474
SexAI	ACCWGGT	1 cut(s)	1155
SfaNI	GCATC	4 cut(s)	466, 1301, 1642, 2130
SfcI	CTRYAG	3 cut(s)	1851, 1981, 2100
SfuI	TTCGAA	1 cut(s)	223
SgrAI	CRCCGGYG	1 cut(s)	182
SinI	GGWCC	3 cut(s)	873, 1754, 1996
SmaI	CCCGGG	1 cut(s)	105
SmiMI	CAYNNNNRTG	5 cut(s)	138, 144, 431, 1409, 1811
SmlI	CTYRAG	2 cut(s)	632, 1417
SmoI	CTYRAG	2 cut(s)	632, 1417
SphI	GCATGC	2 cut(s)	403, 1835
SseBI	AGGCCT	1 cut(s)	1673
SspI	AATATT	1 cut(s)	1108
SspMI	CTAG	5 cut(s)	356, 452, 1809, 2183, 2192
StuI	AGGCCT	1 cut(s)	1673
StyD4I	CCNGG	9 cut(s)	102, 103, 201, 1155, 1507, 1615, 1998, 2439, 2472
StyI	CCWWGG	1 cut(s)	876
TaaI	ACNGT	9 cut(s)	166, 346, 1092, 1237, 1384, 1462, 1646, 2177, 2203
TaiI	ACGT	4 cut(s)	92, 120, 231, 960
TaqI	TCGA	6 cut(s)	223, 460, 510, 591, 1975, 2293
TaqII	GACCGA	1 cut(s)	1567
TatI	WGTACW	5 cut(s)	174, 763, 1464, 1557, 1815
TauI	GCSGC	1 cut(s)	554
Tru1I	TTAA	9 cut(s)	114, 468, 810, 1052, 1287, 1320, 1716, 1748, 2040
Tru9I	TTAA	9 cut(s)	114, 468, 810, 1052, 1287, 1320, 1716, 1748, 2040
TscAI	CASTG	6 cut(s)	745, 1063, 1097, 1228, 1240, 1467
TseFI	GTSAC	6 cut(s)	484, 785, 1231, 1348, 1804, 2374
TseI	GCWGC	4 cut(s)	352, 413, 1282, 1424
Tsp45I	GTSAC	6 cut(s)	484, 785, 1231, 1348, 1804, 2374
TspGWI	ACGGA	1 cut(s)	1682
TspMI	CCCGGG	1 cut(s)	103
TspRI	CASTG	6 cut(s)	745, 1063, 1097, 1228, 1240, 1467
Tth111I	GACNNNGTC	2 cut(s)	146, 344
Van91I	CCANNNNNTGG	3 cut(s)	497, 1394, 2446
VpaK11BI	GGWCC	3 cut(s)	873, 1754, 1996
VspI	ATTAAT	1 cut(s)	2040
XagI	CCTNNNNNAGG	1 cut(s)	2019
XapI	RAATTY	5 cut(s)	377, 932, 1844, 1971, 2522
XbaI	TCTAGA	1 cut(s)	2182
XceI	RCATGY	2 cut(s)	403, 1835
XcmI	CCANNNNNNNNNTGG	1 cut(s)	498
XmaI	CCCGGG	1 cut(s)	103
XspI	CTAG	5 cut(s)	356, 452, 1809, 2183, 2192
ZrmI	AGTACT	1 cut(s)	176
Zsp2I	ATGCAT	1 cut(s)	1294

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.