Prupe.4G022500_v2.0.a1

UPF0051 protein ABCI8

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp04
Physical Location & Seq
Reverse (-)
1064358 .. 1067289
2932 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.4G022500.1

Sequence Viewer

Length: 1650 bp
ATGGCTTCTCTGTTAGCTAACGGTATTTCAAGCTTCTGTCCTCAAGCTGCTTCAGAGCAACCGAAGCTGCTCCCAAAAGGGTTTCATCCAAAGCTCGATTTTTTGAAGCTTTCGGGCGTGAAAACCTCTGTTCCGAAAAGGGTCTTCAAGGTCCGAGCAGATGTTGGGTACGACCCGAAAACGATCTACCCGGATGTCTCACAAGGTAAGCTCTCAATCGAGGAATTTCTTCGTAACCGTGAGTACGACAAGAAATTTGGGTTTAATATAGATATAGATTCGTTTTCGATTCCAAAAGGGCTTTCTAGGGAGACCATACGCTTAATCTCTTCGCTGAAAGAAGAGCCTGATTGGATGCTTGAGTTTAGATTGAATGCTTTTGAGAAATTCTTGACTATGAAAGAGCCCAAATGGTCTGATAATCGATATCCTGTGATTAATTTTCAAGATATGTGTTATTACTCAGCACCCAAGAAGAAACCCGCCTTGAATAGCCTCGATGAGGCAGACCCAGAACTTCTTAAGTACTTTGATAGATTAGGAGTGCCGTTGAATGAGCAGAATCGATTGGCTAATGTTGCAGTCGACGCAGTTCTTGATAGTGTCTCGATAGCCACGACACATAGGAAGGCGTTGGAGGAAAAAGGCGTGATCTTTTGTTCAATATCGGAGGCGATTAGGGAGTACCCAGATTTAGTTAAGAAGTATTTAGGTAGAGTTGTGCCCACTGGGGATAATTATTATGCTGCCTTGAACTCTGCGGTGTTCAGTGATGGATCATTTTGTTATATACCCAAAGACACTAAGTGCCCGATGCAAATTTCAACTTATTTTCGGATAAATGCATTGGAAACGGGGCAGTTTGAGAGAACTTTGATAGTGGCTGATGATAGGAGTTTCGTGGAGTATTTGGAGGGGTGTACTGCACCTTCTTATGATACAAACCAGCTTCATGCTGCAGTAGTAGAGTTGTACTGTGGTGAGGGTGCAGAGATTAAGTACTCCACAGTGCAGAACTGGTATGCCGGGGATGAGCAAGGGAAGGGAGGGATTTACAATTTTGTCACCAAGCGAGGGCTTTGTGCTGGGGCTCGCTCAAAGATATCTTGGACCCAGGTGGAGACAGGGTCTGCCATTACTTGGAAATACCCAAGTGTTATTTTGGAGGGTGATGATTCTGTGGGTGAGTTCTACTCAGTAGCTTTGACTAATAATTATCAACAGGCAGACACAGGTACAAAGATGATACACAAAGGCAAAAATACGAGAAGTAGAATTATTTCAAAGGGCATATCAGCTGGGAATTCAAGGAACTGTTATCGGGGCCTTGTACAGGTTCAATCAAAGGCAGATAATGCTAAAAACTCCTCACAGTGTGATTCAATGCTTATTGGAGACAGTGCAGCTGCCAACACATACCCATATATCCAGGTAAAGAATCCCTCAGCTCGTATTGAACACGAAGCCAGTACCTCCAAAATTGGTGAAGACCAGCTATTTTACTTTCAGCAAAGAGGAATCGACTATGAGAAAGCCATGGCTGCTATGATATCCGGGTTTTGCCAGGATGTATTCAATGAGCTCCCTGACGAGTTTGGGTCTGAGGTGAACCAATTGATTGGTTTGAAGCTTGAAGGATCTGTGGGTTAG

Protein Analysis

550

Amino Acids

61.31

Weight (kDa)

5.95

Isoelectric Point (pI)

28.03

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 1140
AccI GTMKAC 1 cut(s) 585
AciI CCGC 2 cut(s) 483, 761
AclWI GGATC 2 cut(s) 784, 1645
AcsI RAATTY 5 cut(s) 224, 254, 386, 819, 1303
AcuI CTGAAG 1 cut(s) 36
AdeI CACNNNGTG 2 cut(s) 807, 1376
AfiI CCNNNNNNNGG 4 cut(s) 502, 1074, 1140, 1333
AflII CTTAAG 1 cut(s) 521
AjnI CCWGG 3 cut(s) 1113, 1428, 1563
AjuI GAANNNNNNNTTGG 2 cut(s) 286, 318
Alw21I GWGCWC 1 cut(s) 1584
Alw26I GTCTC 5 cut(s) 202, 305, 610, 1115, 1389
AlwI GGATC 2 cut(s) 784, 1645
AlwNI CAGNNNCTG 1 cut(s) 1130
AoxI GGCC 1 cut(s) 1324
ApeKI GCWGC 7 cut(s) 47, 67, 746, 956, 1403, 1406, 1541
ApoI RAATTY 5 cut(s) 224, 254, 386, 819, 1303
ArsI GACNNNNNNTTYG 2 cut(s) 239, 271
AseI ATTAAT 1 cut(s) 438
Asp700I GAANNNNTTC 2 cut(s) 228, 1279
AspS9I GGNCC 3 cut(s) 151, 1110, 1324
AsuC2I CCSGG 3 cut(s) 191, 1027, 1555
AsuHPI GGTGA 6 cut(s) 992, 1057, 1181, 1196, 1496, 1618
AvaII GGWCC 2 cut(s) 151, 1110
BaeGI GKGCMC 2 cut(s) 726, 812
BanII GRGCYC 3 cut(s) 408, 1093, 1584
BarI GAAGNNNNNNTAC 2 cut(s) 913, 945
BbsI GAAGAC 2 cut(s) 136, 1494
Bbv12I GWGCWC 1 cut(s) 1584
BbvCI CCTCAGC 1 cut(s) 1444
BbvI GCAGC 7 cut(s) 34, 54, 733, 943, 1393, 1415, 1528
BccI CCATC 1 cut(s) 767
BceAI ACGGC 1 cut(s) 532
BciT130I CCWGG 3 cut(s) 1115, 1430, 1565
BcnI CCSGG 3 cut(s) 191, 1027, 1555
BcoDI GTCTC 5 cut(s) 202, 305, 610, 1115, 1389
BfaI CTAG 1 cut(s) 306
BfmI CTRYAG 1 cut(s) 957
BfrI CTTAAG 1 cut(s) 521
BisI GCNGC 7 cut(s) 48, 68, 747, 957, 1404, 1407, 1542
BlsI GCNGC 7 cut(s) 49, 69, 748, 958, 1405, 1408, 1543
BmcAI AGTACT 2 cut(s) 527, 1001
Bme1390I CCNGG 6 cut(s) 191, 1027, 1115, 1430, 1555, 1565
Bme18I GGWCC 2 cut(s) 151, 1110
BmgT120I GGNCC 3 cut(s) 151, 1110, 1324
BmiI GGNNCC 2 cut(s) 1112, 1325
BmrFI CCNGG 6 cut(s) 191, 1027, 1115, 1430, 1555, 1565
BmrI ACTGGG 1 cut(s) 738
BmsI GCATC 2 cut(s) 345, 804
BmuI ACTGGG 1 cut(s) 738
BpiI GAAGAC 2 cut(s) 136, 1494
BplI GAGNNNNNCTC 2 cut(s) 1178, 1210
Bpu10I CCTNAGC 1 cut(s) 1444
BpuEI CTTGAG 2 cut(s) 27, 380
BpuMI CCSGG 3 cut(s) 191, 1027, 1555
Bsa29I ATCGAT 2 cut(s) 424, 565
BsaI GGTCTC 1 cut(s) 305
BsaJI CCNNGG 3 cut(s) 1026, 1113, 1536
BsaXI ACNNNNNCTCC 2 cut(s) 1112, 1142
Bsc4I CCNNNNNNNGG 4 cut(s) 502, 1074, 1140, 1333
Bse1I ACTGG 3 cut(s) 733, 1022, 1467
BseBI CCWGG 3 cut(s) 1115, 1430, 1565
BseCI ATCGAT 2 cut(s) 424, 565
BseDI CCNNGG 3 cut(s) 1026, 1113, 1536
BseGI GGATG 5 cut(s) 85, 199, 360, 1036, 1573
BseLI CCNNNNNNNGG 4 cut(s) 502, 1074, 1140, 1333
BseMII CTCAG 4 cut(s) 477, 1209, 1458, 1593
BseNI ACTGG 3 cut(s) 733, 1022, 1467
BseRI GAGGAG 1 cut(s) 1357
BseSI GKGCMC 2 cut(s) 726, 812
BseXI GCAGC 7 cut(s) 34, 54, 733, 943, 1393, 1415, 1528
BseYI CCCAGC 2 cut(s) 1085, 1298
BsgI GTGCAG 4 cut(s) 909, 1008, 1031, 1422
BshFI GGCC 1 cut(s) 1326
BshVI ATCGAT 2 cut(s) 424, 565
BsiHKAI GWGCWC 1 cut(s) 1584
BsiSI CCGG 3 cut(s) 191, 1026, 1554
BslI CCNNNNNNNGG 4 cut(s) 502, 1074, 1140, 1333
BsmAI GTCTC 5 cut(s) 202, 305, 610, 1115, 1389
BsmI GAATGC 1 cut(s) 379
BsnI GGCC 1 cut(s) 1326
Bso31I GGTCTC 1 cut(s) 305
Bsp1286I GDGCHC 5 cut(s) 408, 726, 812, 1093, 1584
Bsp1407I TGTACA 1 cut(s) 1330
Bsp143I GATC 4 cut(s) 183, 651, 776, 1637
Bsp19I CCATGG 1 cut(s) 1536
BspACI CCGC 2 cut(s) 483, 761
BspANI GGCC 1 cut(s) 1326
BspCNI CTCAG 4 cut(s) 476, 1208, 1457, 1594
BspDI ATCGAT 2 cut(s) 424, 565
BspLI GGNNCC 2 cut(s) 1112, 1325
BspMAI CTGCAG 1 cut(s) 961
BspPI GGATC 2 cut(s) 784, 1645
BspQI GCTCTTC 1 cut(s) 336
BspTI CTTAAG 1 cut(s) 521
BspTNI GGTCTC 1 cut(s) 305
BsrGI TGTACA 1 cut(s) 1330
BsrI ACTGG 3 cut(s) 733, 1022, 1467
BssECI CCNNGG 3 cut(s) 1026, 1113, 1536
BssMI GATC 4 cut(s) 183, 651, 776, 1637
BssT1I CCWWGG 1 cut(s) 1536
Bst2UI CCWGG 3 cut(s) 1115, 1430, 1565
Bst4CI ACNGT 7 cut(s) 23, 239, 977, 1009, 1316, 1374, 1400
Bst6I CTCTTC 2 cut(s) 334, 336
BstAFI CTTAAG 1 cut(s) 521
BstAPI GCANNNNNTGC 1 cut(s) 1355
BstAUI TGTACA 1 cut(s) 1330
BstC8I GCNNGC 1 cut(s) 1093
BstDEI CTNAG 5 cut(s) 463, 804, 1195, 1444, 1602
BstDSI CCRYGG 1 cut(s) 1536
BstENI CCTNNNNNAGG 2 cut(s) 500, 1331
BstF5I GGATG 5 cut(s) 85, 199, 360, 1036, 1573
BstKTI GATC 4 cut(s) 186, 654, 779, 1640
BstMAI GTCTC 5 cut(s) 202, 305, 610, 1115, 1389
BstMBI GATC 4 cut(s) 183, 651, 776, 1637
BstMWI GCNNNNNNNGC 5 cut(s) 64, 578, 587, 1355, 1541
BstNI CCWGG 3 cut(s) 1115, 1430, 1565
BstSCI CCNGG 6 cut(s) 189, 1025, 1113, 1428, 1553, 1563
BstSFI CTRYAG 1 cut(s) 957
BstSLI GKGCMC 2 cut(s) 726, 812
BstV1I GCAGC 7 cut(s) 34, 54, 733, 943, 1393, 1415, 1528
BstV2I GAAGAC 2 cut(s) 136, 1494
BstX2I RGATCY 1 cut(s) 1637
BstXI CCANNNNNNTGG 1 cut(s) 1619
BstYI RGATCY 1 cut(s) 1637
Bsu15I ATCGAT 2 cut(s) 424, 565
BsuRI GGCC 1 cut(s) 1326
BsuTUI ATCGAT 2 cut(s) 424, 565
BtgI CCRYGG 1 cut(s) 1536
BtsCI GGATG 5 cut(s) 85, 199, 360, 1036, 1573
BtsIMutI CAGTG 5 cut(s) 726, 775, 1014, 1379, 1405
Cac8I GCNNGC 1 cut(s) 1093
CaiI CAGNNNCTG 1 cut(s) 1130
Cfr13I GGNCC 3 cut(s) 151, 1110, 1324
ClaI ATCGAT 2 cut(s) 424, 565
CseI GACGC 1 cut(s) 596
CviAII CATG 2 cut(s) 953, 1537
DdeI CTNAG 5 cut(s) 463, 804, 1195, 1444, 1602
DpnI GATC 4 cut(s) 185, 653, 778, 1639
DpnII GATC 4 cut(s) 183, 651, 776, 1637
DraIII CACNNNGTG 2 cut(s) 807, 1376
Eam1104I CTCTTC 2 cut(s) 334, 336
EarI CTCTTC 2 cut(s) 334, 336
Ecl136II GAGCTC 1 cut(s) 1582
Eco130I CCWWGG 1 cut(s) 1536
Eco24I GRGCYC 3 cut(s) 408, 1093, 1584
Eco31I GGTCTC 1 cut(s) 305
Eco32I GATATC 3 cut(s) 428, 1104, 1551
Eco47I GGWCC 2 cut(s) 151, 1110
Eco53kI GAGCTC 1 cut(s) 1582
Eco57I CTGAAG 1 cut(s) 36
EcoICRI GAGCTC 1 cut(s) 1582
EcoNI CCTNNNNNAGG 2 cut(s) 500, 1331
EcoO109I RGGNCCY 1 cut(s) 1324
EcoRI GAATTC 1 cut(s) 1303
EcoRII CCWGG 3 cut(s) 1113, 1428, 1563
EcoRV GATATC 3 cut(s) 428, 1104, 1551
EcoT14I CCWWGG 1 cut(s) 1536
EcoT22I ATGCAT 1 cut(s) 847
EcoT38I GRGCYC 3 cut(s) 408, 1093, 1584
ErhI CCWWGG 1 cut(s) 1536
FaeI CATG 2 cut(s) 956, 1540
FatI CATG 2 cut(s) 952, 1536
FauI CCCGC 1 cut(s) 490
FblI GTMKAC 1 cut(s) 585
Fnu4HI GCNGC 7 cut(s) 48, 68, 747, 957, 1404, 1407, 1542
FokI GGATG 5 cut(s) 72, 206, 367, 1043, 1580
FriOI GRGCYC 3 cut(s) 408, 1093, 1584
Fsp4HI GCNGC 7 cut(s) 48, 68, 747, 957, 1404, 1407, 1542
FspBI CTAG 1 cut(s) 306
GluI GCNGC 7 cut(s) 48, 68, 747, 957, 1404, 1407, 1542
GsaI CCCAGC 2 cut(s) 1089, 1302
HaeIII GGCC 1 cut(s) 1326
HapII CCGG 3 cut(s) 191, 1026, 1554
HgaI GACGC 1 cut(s) 596
Hin1II CATG 2 cut(s) 956, 1540
HincII GTYRAC 1 cut(s) 586
HindII GTYRAC 1 cut(s) 586
HindIII AAGCTT 3 cut(s) 31, 107, 1628
HinfI GANTC 7 cut(s) 278, 289, 562, 1175, 1379, 1438, 1518
HpaII CCGG 3 cut(s) 191, 1026, 1554
HphI GGTGA 6 cut(s) 992, 1057, 1181, 1196, 1496, 1618
Hpy166II GTNNAC 3 cut(s) 586, 921, 1609
Hpy188I TCNGA 7 cut(s) 55, 135, 155, 418, 670, 837, 1603
Hpy188III TCNNGA 4 cut(s) 391, 446, 596, 607
Hpy8I GTNNAC 3 cut(s) 586, 921, 1609
Hpy99I CGWCG 1 cut(s) 590
HpyAV CCTTC 4 cut(s) 622, 939, 1036, 1628
HpyCH4III ACNGT 7 cut(s) 23, 239, 977, 1009, 1316, 1374, 1400
HpyCH4V TGCA 8 cut(s) 581, 817, 845, 926, 959, 989, 1012, 1403
HpyF10VI GCNNNNNNNGC 5 cut(s) 64, 578, 587, 1355, 1541
HpyF3I CTNAG 5 cut(s) 463, 804, 1195, 1444, 1602
Hsp92II CATG 2 cut(s) 956, 1540
Kzo9I GATC 4 cut(s) 183, 651, 776, 1637
LguI GCTCTTC 1 cut(s) 336
LmnI GCTCC 2 cut(s) 75, 1587
Lsp1109I GCAGC 7 cut(s) 34, 54, 733, 943, 1393, 1415, 1528
LweI GCATC 2 cut(s) 345, 804
MaeI CTAG 1 cut(s) 306
MaeIII GTNAC 2 cut(s) 233, 1063
MalI GATC 4 cut(s) 185, 653, 778, 1639
MboI GATC 4 cut(s) 183, 651, 776, 1637
MboII GAAGA 6 cut(s) 136, 221, 321, 353, 487, 1499
MfeI CAATTG 1 cut(s) 1613
MflI RGATCY 1 cut(s) 1637
MhlI GDGCHC 5 cut(s) 408, 726, 812, 1093, 1584
MmeI TCCRAC 1 cut(s) 615
Mph1103I ATGCAT 1 cut(s) 847
MroXI GAANNNNTTC 2 cut(s) 228, 1279
MseI TTAA 6 cut(s) 264, 323, 438, 522, 699, 996
MspA1I CMGCKG 2 cut(s) 1298, 1406
MspCI CTTAAG 1 cut(s) 521
MspI CCGG 3 cut(s) 191, 1026, 1554
MspR9I CCNGG 6 cut(s) 191, 1027, 1115, 1430, 1555, 1565
MunI CAATTG 1 cut(s) 1613
Mva1269I GAATGC 1 cut(s) 379
MvaI CCWGG 3 cut(s) 1115, 1430, 1565
MwoI GCNNNNNNNGC 5 cut(s) 64, 578, 587, 1355, 1541
NciI CCSGG 3 cut(s) 191, 1027, 1555
NcoI CCATGG 1 cut(s) 1536
NdeII GATC 4 cut(s) 183, 651, 776, 1637
NlaIII CATG 2 cut(s) 956, 1540
NlaIV GGNNCC 2 cut(s) 1112, 1325
NmuCI GTSAC 1 cut(s) 1063
NsiI ATGCAT 1 cut(s) 847
PciSI GCTCTTC 1 cut(s) 336
PcsI WCGNNNNNNNCGW 1 cut(s) 614
PctI GAATGC 1 cut(s) 379
PdmI GAANNNNTTC 2 cut(s) 228, 1279
PfeI GAWTC 7 cut(s) 278, 289, 562, 1175, 1379, 1438, 1518
PflFI GACNNNGTC 1 cut(s) 1126
PflMI CCANNNNNTGG 1 cut(s) 1140
PkrI GCNGC 7 cut(s) 49, 69, 748, 958, 1405, 1408, 1543
PshBI ATTAAT 1 cut(s) 438
Psp124BI GAGCTC 1 cut(s) 1584
Psp6I CCWGG 3 cut(s) 1113, 1428, 1563
PspFI CCCAGC 2 cut(s) 1085, 1298
PspGI CCWGG 3 cut(s) 1113, 1428, 1563
PspN4I GGNNCC 2 cut(s) 1112, 1325
PspPI GGNCC 3 cut(s) 151, 1110, 1324
PstI CTGCAG 1 cut(s) 961
PstNI CAGNNNCTG 1 cut(s) 1130
PsuI RGATCY 1 cut(s) 1637
PsyI GACNNNGTC 1 cut(s) 1126
PvuII CAGCTG 2 cut(s) 1298, 1406
SacI GAGCTC 1 cut(s) 1584
SalI GTCGAC 1 cut(s) 584
SapI GCTCTTC 1 cut(s) 336
SaqAI TTAA 6 cut(s) 264, 323, 438, 522, 699, 996
SatI GCNGC 7 cut(s) 48, 68, 747, 957, 1404, 1407, 1542
Sau3AI GATC 4 cut(s) 183, 651, 776, 1637
Sau96I GGNCC 3 cut(s) 151, 1110, 1324
ScaI AGTACT 2 cut(s) 527, 1001
ScrFI CCNGG 6 cut(s) 191, 1027, 1115, 1430, 1555, 1565
SduI GDGCHC 5 cut(s) 408, 726, 812, 1093, 1584
SfaNI GCATC 2 cut(s) 345, 804
SfcI CTRYAG 1 cut(s) 957
SinI GGWCC 2 cut(s) 151, 1110
SmlI CTYRAG 3 cut(s) 42, 359, 521
SmoI CTYRAG 3 cut(s) 42, 359, 521
SsiI CCGC 2 cut(s) 483, 761
SspMI CTAG 1 cut(s) 306
SstI GAGCTC 1 cut(s) 1584
StyD4I CCNGG 6 cut(s) 189, 1025, 1113, 1428, 1553, 1563
StyI CCWWGG 1 cut(s) 1536
TaaI ACNGT 7 cut(s) 23, 239, 977, 1009, 1316, 1374, 1400
TaqI TCGA 9 cut(s) 96, 219, 287, 424, 498, 565, 585, 608, 1521
TatI WGTACW 5 cut(s) 525, 920, 972, 999, 1330
TfiI GAWTC 7 cut(s) 278, 289, 562, 1175, 1379, 1438, 1518
Tru1I TTAA 6 cut(s) 264, 323, 438, 522, 699, 996
Tru9I TTAA 6 cut(s) 264, 323, 438, 522, 699, 996
TscAI CASTG 5 cut(s) 733, 775, 1014, 1379, 1405
TseFI GTSAC 1 cut(s) 1063
TseI GCWGC 7 cut(s) 47, 67, 746, 956, 1403, 1406, 1541
Tsp45I GTSAC 1 cut(s) 1063
TspDTI ATGAA 3 cut(s) 74, 413, 941
TspRI CASTG 5 cut(s) 733, 775, 1014, 1379, 1405
Tth111I GACNNNGTC 1 cut(s) 1126
Van91I CCANNNNNTGG 1 cut(s) 1140
Vha464I CTTAAG 1 cut(s) 521
VpaK11BI GGWCC 2 cut(s) 151, 1110
VspI ATTAAT 1 cut(s) 438
XagI CCTNNNNNAGG 2 cut(s) 500, 1331
XapI RAATTY 5 cut(s) 224, 254, 386, 819, 1303
XmiI GTMKAC 1 cut(s) 585
XmnI GAANNNNTTC 2 cut(s) 228, 1279
XspI CTAG 1 cut(s) 306
ZrmI AGTACT 2 cut(s) 527, 1001
Zsp2I ATGCAT 1 cut(s) 847
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.