(E,E)-alpha-farnesene
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| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_3g03000 |
| malus_domestica | MD10G1311000.v1.1 |
| prunus_persica | Prupe.4G029900_v2.0.a1 Prupe.4G125200_v2.0.a1 Prupe.4G125300_v2.0.a1 Prupe.4G125300_v2.0.a1 Prupe.4G125500_v2.0.a1 Prupe.4G126400_v2.0.a1 Prupe.4G126600_v2.0.a1 Prupe.4G126600_v2.0.a1 |
| pyrus_communis | pycom10g26190 |
| rosa_chinensis | RchiOBHm_Chr1g0331201 RchiOBHm_Chr1g0331211 RchiOBHm_Chr5g0004591 RchiOBHm_Chr5g0004631 RchiOBHm_Chr5g0029171 RchiOBHm_Chr5g0029181 RchiOBHm_Chr5g0029221 RchiOBHm_Chr5g0029231 |
| rosa_laevigata | RLG00000031243 RLG00000031247 RLG00000031248 |
| rosa_multiflora | Rmu_sc0003758.1_g000015 Rmu_sc0005711.1_g000009 Rmu_sc0012347.1_g000002 |
| rosa_roxburghii | Rroxscaffold_1G00070900 Rroxscaffold_1G00070960 |
| rosa_rugosa | Rorug04G0412300 Rorug04G0412700 Rorug04G0412800 Rorug04G0412900 Rorug04G0413000 |
| rosa_samantha | Rh1AG116200 Rh1DG120600 Rh5AG040400 Rh5BG039900 Rh5CG043700 Rh5CG044200 Rh5CG224800 Rh5DG039500 Rh5DG039600 Rh5DG040200 |
| rosa_wichuraiana | Rw1G009340 Rw5G003880 Rw5G003920 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 177 |
| AasI | GACNNNNNNGTC | 1 cut(s) | 728 |
| AccB7I | CCANNNNNTGG | 2 cut(s) | 652, 819 |
| AciI | CCGC | 1 cut(s) | 679 |
| AclWI | GGATC | 1 cut(s) | 400 |
| AcsI | RAATTY | 3 cut(s) | 39, 238, 901 |
| AcyI | GRCGYC | 2 cut(s) | 708, 1023 |
| AfaI | GTAC | 4 cut(s) | 398, 472, 1220, 1253 |
| AfiI | CCNNNNNNNGG | 4 cut(s) | 493, 652, 819, 1032 |
| AgeI | ACCGGT | 1 cut(s) | 1032 |
| AhlI | ACTAGT | 1 cut(s) | 1705 |
| AjiI | CACGTC | 1 cut(s) | 730 |
| AjnI | CCWGG | 2 cut(s) | 534, 1242 |
| AluBI | AGCT | 9 cut(s) | 26, 196, 248, 259, 575, 590, 658, 1006, 1505 |
| AluI | AGCT | 9 cut(s) | 26, 196, 248, 259, 575, 590, 658, 1006, 1505 |
| Alw21I | GWGCWC | 1 cut(s) | 1095 |
| Alw26I | GTCTC | 1 cut(s) | 1704 |
| AlwI | GGATC | 1 cut(s) | 400 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 357 |
| Ama87I | CYCGRG | 1 cut(s) | 1623 |
| AoxI | GGCC | 3 cut(s) | 283, 832, 1227 |
| ApeKI | GCWGC | 3 cut(s) | 34, 415, 1427 |
| ApoI | RAATTY | 3 cut(s) | 39, 238, 901 |
| AsiGI | ACCGGT | 1 cut(s) | 1032 |
| AspLEI | GCGC | 2 cut(s) | 1060, 1633 |
| AspS9I | GGNCC | 4 cut(s) | 643, 832, 1227, 1297 |
| AsuHPI | GGTGA | 6 cut(s) | 41, 560, 1009, 1495, 1584, 1676 |
| AvaI | CYCGRG | 1 cut(s) | 1623 |
| AvaII | GGWCC | 2 cut(s) | 643, 1297 |
| AxyI | CCTNAGG | 1 cut(s) | 410 |
| BaeGI | GKGCMC | 1 cut(s) | 702 |
| Bbv12I | GWGCWC | 1 cut(s) | 1095 |
| BbvCI | CCTCAGC | 1 cut(s) | 1456 |
| BbvI | GCAGC | 3 cut(s) | 46, 427, 1439 |
| BccI | CCATC | 3 cut(s) | 495, 1246, 1643 |
| BceAI | ACGGC | 1 cut(s) | 1010 |
| BciT130I | CCWGG | 2 cut(s) | 536, 1244 |
| BclI | TGATCA | 1 cut(s) | 1666 |
| BcoDI | GTCTC | 1 cut(s) | 1704 |
| BcuI | ACTAGT | 1 cut(s) | 1705 |
| BfaI | CTAG | 4 cut(s) | 260, 281, 323, 1706 |
| BfmI | CTRYAG | 1 cut(s) | 1425 |
| BfoI | RGCGCY | 1 cut(s) | 1061 |
| BglII | AGATCT | 3 cut(s) | 796, 1077, 1369 |
| BisI | GCNGC | 3 cut(s) | 35, 416, 1428 |
| BlpI | GCTNAGC | 1 cut(s) | 1403 |
| BlsI | GCNGC | 3 cut(s) | 36, 417, 1429 |
| Bme1390I | CCNGG | 2 cut(s) | 536, 1244 |
| Bme18I | GGWCC | 2 cut(s) | 643, 1297 |
| BmeT110I | CYCGRG | 1 cut(s) | 1623 |
| BmgBI | CACGTC | 1 cut(s) | 730 |
| BmgT120I | GGNCC | 4 cut(s) | 643, 832, 1227, 1297 |
| BmrFI | CCNGG | 2 cut(s) | 536, 1244 |
| BmsI | GCATC | 8 cut(s) | 45, 344, 536, 818, 1256, 1438, 1645, 1695 |
| Bpu10I | CCTNAGC | 1 cut(s) | 1456 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 1403 |
| BpuEI | CTTGAG | 1 cut(s) | 1585 |
| BsaHI | GRCGYC | 2 cut(s) | 708, 1023 |
| BsaJI | CCNNGG | 1 cut(s) | 1242 |
| BsaWI | WCCGGW | 1 cut(s) | 1032 |
| Bsc4I | CCNNNNNNNGG | 4 cut(s) | 493, 652, 819, 1032 |
| Bse118I | RCCGGY | 1 cut(s) | 1032 |
| Bse21I | CCTNAGG | 1 cut(s) | 410 |
| Bse3DI | GCAATG | 1 cut(s) | 1414 |
| BseBI | CCWGG | 2 cut(s) | 536, 1244 |
| BseDI | CCNNGG | 1 cut(s) | 1242 |
| BseGI | GGATG | 8 cut(s) | 466, 502, 809, 1045, 1238, 1271, 1453, 1686 |
| BseLI | CCNNNNNNNGG | 4 cut(s) | 493, 652, 819, 1032 |
| BseMI | GCAATG | 1 cut(s) | 1414 |
| BseMII | CTCAG | 8 cut(s) | 180, 263, 607, 1044, 1175, 1270, 1417, 1470 |
| BseRI | GAGGAG | 2 cut(s) | 479, 1145 |
| BseSI | GKGCMC | 1 cut(s) | 702 |
| BseXI | GCAGC | 3 cut(s) | 46, 427, 1439 |
| BsgI | GTGCAG | 1 cut(s) | 1340 |
| BshFI | GGCC | 3 cut(s) | 285, 834, 1229 |
| BshTI | ACCGGT | 1 cut(s) | 1032 |
| BsiHKAI | GWGCWC | 1 cut(s) | 1095 |
| BsiHKCI | CYCGRG | 1 cut(s) | 1623 |
| BsiSI | CCGG | 1 cut(s) | 1033 |
| BslI | CCNNNNNNNGG | 4 cut(s) | 493, 652, 819, 1032 |
| BsmAI | GTCTC | 1 cut(s) | 1704 |
| BsmI | GAATGC | 3 cut(s) | 53, 513, 1540 |
| BsnI | GGCC | 3 cut(s) | 285, 834, 1229 |
| BsoBI | CYCGRG | 1 cut(s) | 1623 |
| Bsp1286I | GDGCHC | 2 cut(s) | 702, 1095 |
| Bsp143I | GATC | 6 cut(s) | 98, 405, 796, 1077, 1369, 1666 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 1403 |
| BspACI | CCGC | 1 cut(s) | 679 |
| BspANI | GGCC | 3 cut(s) | 285, 834, 1229 |
| BspCNI | CTCAG | 8 cut(s) | 181, 262, 606, 1045, 1174, 1269, 1416, 1469 |
| BspHI | TCATGA | 1 cut(s) | 1120 |
| BspMAI | CTGCAG | 1 cut(s) | 1429 |
| BspPI | GGATC | 1 cut(s) | 400 |
| BspQI | GCTCTTC | 1 cut(s) | 996 |
| BsrDI | GCAATG | 1 cut(s) | 1414 |
| BsrFI | RCCGGY | 1 cut(s) | 1032 |
| BssAI | RCCGGY | 1 cut(s) | 1032 |
| BssECI | CCNNGG | 1 cut(s) | 1242 |
| BssMI | GATC | 6 cut(s) | 98, 405, 796, 1077, 1369, 1666 |
| BssNI | GRCGYC | 2 cut(s) | 708, 1023 |
| Bst2UI | CCWGG | 2 cut(s) | 536, 1244 |
| Bst4CI | ACNGT | 1 cut(s) | 1223 |
| Bst6I | CTCTTC | 3 cut(s) | 667, 996, 1242 |
| BstACI | GRCGYC | 2 cut(s) | 708, 1023 |
| BstC8I | GCNNGC | 1 cut(s) | 24 |
| BstF5I | GGATG | 8 cut(s) | 466, 502, 809, 1045, 1238, 1271, 1453, 1686 |
| BstH2I | RGCGCY | 1 cut(s) | 1061 |
| BstHHI | GCGC | 2 cut(s) | 1060, 1633 |
| BstKTI | GATC | 6 cut(s) | 101, 408, 799, 1080, 1372, 1669 |
| BstMAI | GTCTC | 1 cut(s) | 1704 |
| BstMBI | GATC | 6 cut(s) | 98, 405, 796, 1077, 1369, 1666 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 1457, 1628 |
| BstNI | CCWGG | 2 cut(s) | 536, 1244 |
| BstNSI | RCATGY | 1 cut(s) | 641 |
| BstSCI | CCNGG | 2 cut(s) | 534, 1242 |
| BstSFI | CTRYAG | 1 cut(s) | 1425 |
| BstSLI | GKGCMC | 1 cut(s) | 702 |
| BstV1I | GCAGC | 3 cut(s) | 46, 427, 1439 |
| BstX2I | RGATCY | 4 cut(s) | 405, 796, 1077, 1369 |
| BstXI | CCANNNNNNTGG | 2 cut(s) | 123, 640 |
| BstYI | RGATCY | 4 cut(s) | 405, 796, 1077, 1369 |
| Bsu36I | CCTNAGG | 1 cut(s) | 410 |
| BsuRI | GGCC | 3 cut(s) | 285, 834, 1229 |
| BtgZI | GCGATG | 1 cut(s) | 256 |
| BtrI | CACGTC | 1 cut(s) | 730 |
| BtsCI | GGATG | 8 cut(s) | 466, 502, 809, 1045, 1238, 1271, 1453, 1686 |
| BtsI | GCAGTG | 1 cut(s) | 387 |
| BtsIMutI | CAGTG | 2 cut(s) | 387, 1293 |
| Cac8I | GCNNGC | 1 cut(s) | 24 |
| CaiI | CAGNNNCTG | 1 cut(s) | 357 |
| CciI | TCATGA | 1 cut(s) | 1120 |
| CfoI | GCGC | 2 cut(s) | 1060, 1633 |
| Cfr10I | RCCGGY | 1 cut(s) | 1032 |
| Cfr13I | GGNCC | 4 cut(s) | 643, 832, 1227, 1297 |
| CseI | GACGC | 2 cut(s) | 716, 1031 |
| Csp6I | GTAC | 4 cut(s) | 397, 471, 1219, 1252 |
| CspAI | ACCGGT | 1 cut(s) | 1032 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 1600, 1635 |
| CviQI | GTAC | 4 cut(s) | 397, 471, 1219, 1252 |
| DpnI | GATC | 6 cut(s) | 100, 407, 798, 1079, 1371, 1668 |
| DpnII | GATC | 6 cut(s) | 98, 405, 796, 1077, 1369, 1666 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 728 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 728 |
| Eam1104I | CTCTTC | 3 cut(s) | 667, 996, 1242 |
| EarI | CTCTTC | 3 cut(s) | 667, 996, 1242 |
| Eco147I | AGGCCT | 1 cut(s) | 285 |
| Eco32I | GATATC | 1 cut(s) | 556 |
| Eco47I | GGWCC | 2 cut(s) | 643, 1297 |
| Eco81I | CCTNAGG | 1 cut(s) | 410 |
| Eco88I | CYCGRG | 1 cut(s) | 1623 |
| EcoO109I | RGGNCCY | 1 cut(s) | 1227 |
| EcoRII | CCWGG | 2 cut(s) | 534, 1242 |
| EcoRV | GATATC | 1 cut(s) | 556 |
| EcoT22I | ATGCAT | 2 cut(s) | 1271, 1540 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 495, 527, 1067, 1099 |
| FbaI | TGATCA | 1 cut(s) | 1666 |
| Fnu4HI | GCNGC | 3 cut(s) | 35, 416, 1428 |
| FokI | GGATG | 8 cut(s) | 473, 509, 796, 1052, 1225, 1278, 1460, 1673 |
| Fsp4HI | GCNGC | 3 cut(s) | 35, 416, 1428 |
| FspBI | CTAG | 4 cut(s) | 260, 281, 323, 1706 |
| GlaI | GCGC | 2 cut(s) | 1059, 1632 |
| GluI | GCNGC | 3 cut(s) | 35, 416, 1428 |
| HaeII | RGCGCY | 1 cut(s) | 1061 |
| HaeIII | GGCC | 3 cut(s) | 285, 834, 1229 |
| HapII | CCGG | 1 cut(s) | 1033 |
| HgaI | GACGC | 2 cut(s) | 716, 1031 |
| HhaI | GCGC | 2 cut(s) | 1060, 1633 |
| Hin1I | GRCGYC | 2 cut(s) | 708, 1023 |
| Hin6I | GCGC | 2 cut(s) | 1058, 1631 |
| HinP1I | GCGC | 2 cut(s) | 1058, 1631 |
| HincII | GTYRAC | 4 cut(s) | 265, 733, 952, 1030 |
| HindII | GTYRAC | 4 cut(s) | 265, 733, 952, 1030 |
| HindIII | AAGCTT | 1 cut(s) | 573 |
| HinfI | GANTC | 6 cut(s) | 143, 599, 958, 1147, 1332, 1693 |
| HpaII | CCGG | 1 cut(s) | 1033 |
| HphI | GGTGA | 6 cut(s) | 41, 560, 1009, 1495, 1584, 1676 |
| Hpy166II | GTNNAC | 5 cut(s) | 265, 733, 952, 979, 1030 |
| Hpy188I | TCNGA | 5 cut(s) | 190, 496, 596, 963, 1392 |
| Hpy188III | TCNNGA | 6 cut(s) | 44, 617, 1064, 1121, 1670, 1690 |
| Hpy8I | GTNNAC | 5 cut(s) | 265, 733, 952, 979, 1030 |
| Hpy99I | CGWCG | 2 cut(s) | 977, 1025 |
| HpyAV | CCTTC | 3 cut(s) | 539, 577, 1593 |
| HpyCH4III | ACNGT | 1 cut(s) | 1223 |
| HpyCH4IV | ACGT | 2 cut(s) | 729, 975 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 1457, 1628 |
| HpySE526I | ACGT | 2 cut(s) | 729, 975 |
| Hsp92I | GRCGYC | 2 cut(s) | 708, 1023 |
| HspAI | GCGC | 2 cut(s) | 1058, 1631 |
| Ksp22I | TGATCA | 1 cut(s) | 1666 |
| Kzo9I | GATC | 6 cut(s) | 98, 405, 796, 1077, 1369, 1666 |
| LguI | GCTCTTC | 1 cut(s) | 996 |
| LmnI | GCTCC | 2 cut(s) | 655, 1456 |
| Lsp1109I | GCAGC | 3 cut(s) | 46, 427, 1439 |
| LweI | GCATC | 8 cut(s) | 45, 344, 536, 818, 1256, 1438, 1645, 1695 |
| MaeI | CTAG | 4 cut(s) | 260, 281, 323, 1706 |
| MaeII | ACGT | 2 cut(s) | 729, 975 |
| MaeIII | GTNAC | 3 cut(s) | 1155, 1469, 1590 |
| MalI | GATC | 6 cut(s) | 100, 407, 798, 1079, 1371, 1668 |
| MboI | GATC | 6 cut(s) | 98, 405, 796, 1077, 1369, 1666 |
| MflI | RGATCY | 4 cut(s) | 405, 796, 1077, 1369 |
| MhlI | GDGCHC | 2 cut(s) | 702, 1095 |
| MluCI | AATT | 8 cut(s) | 39, 106, 238, 749, 901, 1113, 1125, 1381 |
| MmeI | TCCRAC | 1 cut(s) | 1124 |
| Mph1103I | ATGCAT | 2 cut(s) | 1271, 1540 |
| MseI | TTAA | 7 cut(s) | 210, 402, 476, 693, 762, 768, 899 |
| MslI | CAYNNNNRTG | 3 cut(s) | 168, 814, 1362 |
| MspI | CCGG | 1 cut(s) | 1033 |
| MspR9I | CCNGG | 2 cut(s) | 536, 1244 |
| Mva1269I | GAATGC | 3 cut(s) | 53, 513, 1540 |
| MvaI | CCWGG | 2 cut(s) | 536, 1244 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 1457, 1628 |
| NdeII | GATC | 6 cut(s) | 98, 405, 796, 1077, 1369, 1666 |
| NmuCI | GTSAC | 1 cut(s) | 1590 |
| NsiI | ATGCAT | 2 cut(s) | 1271, 1540 |
| NspI | RCATGY | 1 cut(s) | 641 |
| PaeR7I | CTCGAG | 1 cut(s) | 1623 |
| PagI | TCATGA | 1 cut(s) | 1120 |
| PceI | AGGCCT | 1 cut(s) | 285 |
| PciSI | GCTCTTC | 1 cut(s) | 996 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 978 |
| PctI | GAATGC | 3 cut(s) | 53, 513, 1540 |
| PfeI | GAWTC | 6 cut(s) | 143, 599, 958, 1147, 1332, 1693 |
| PflMI | CCANNNNNTGG | 2 cut(s) | 652, 819 |
| PinAI | ACCGGT | 1 cut(s) | 1032 |
| PkrI | GCNGC | 3 cut(s) | 36, 417, 1429 |
| PsiI | TTATAA | 1 cut(s) | 177 |
| Psp6I | CCWGG | 2 cut(s) | 534, 1242 |
| PspGI | CCWGG | 2 cut(s) | 534, 1242 |
| PspPI | GGNCC | 4 cut(s) | 643, 832, 1227, 1297 |
| PspXI | VCTCGAGB | 1 cut(s) | 1623 |
| PstI | CTGCAG | 1 cut(s) | 1429 |
| PstNI | CAGNNNCTG | 1 cut(s) | 357 |
| PsuI | RGATCY | 4 cut(s) | 405, 796, 1077, 1369 |
| RsaI | GTAC | 4 cut(s) | 398, 472, 1220, 1253 |
| RsaNI | GTAC | 4 cut(s) | 397, 471, 1219, 1252 |
| RseI | CAYNNNNRTG | 3 cut(s) | 168, 814, 1362 |
| SapI | GCTCTTC | 1 cut(s) | 996 |
| SaqAI | TTAA | 7 cut(s) | 210, 402, 476, 693, 762, 768, 899 |
| SatI | GCNGC | 3 cut(s) | 35, 416, 1428 |
| Sau3AI | GATC | 6 cut(s) | 98, 405, 796, 1077, 1369, 1666 |
| Sau96I | GGNCC | 4 cut(s) | 643, 832, 1227, 1297 |
| ScrFI | CCNGG | 2 cut(s) | 536, 1244 |
| SduI | GDGCHC | 2 cut(s) | 702, 1095 |
| SfaNI | GCATC | 8 cut(s) | 45, 344, 536, 818, 1256, 1438, 1645, 1695 |
| SfcI | CTRYAG | 1 cut(s) | 1425 |
| Sfr274I | CTCGAG | 1 cut(s) | 1623 |
| SinI | GGWCC | 2 cut(s) | 643, 1297 |
| SlaI | CTCGAG | 1 cut(s) | 1623 |
| SmiMI | CAYNNNNRTG | 3 cut(s) | 168, 814, 1362 |
| SmlI | CTYRAG | 2 cut(s) | 1564, 1623 |
| SmoI | CTYRAG | 2 cut(s) | 1564, 1623 |
| SpeI | ACTAGT | 1 cut(s) | 1705 |
| Sse9I | AATT | 8 cut(s) | 39, 106, 238, 749, 901, 1113, 1125, 1381 |
| SseBI | AGGCCT | 1 cut(s) | 285 |
| SsiI | CCGC | 1 cut(s) | 679 |
| SspI | AATATT | 2 cut(s) | 121, 1618 |
| SspMI | CTAG | 4 cut(s) | 260, 281, 323, 1706 |
| StuI | AGGCCT | 1 cut(s) | 285 |
| StyD4I | CCNGG | 2 cut(s) | 534, 1242 |
| TaaI | ACNGT | 1 cut(s) | 1223 |
| TaiI | ACGT | 2 cut(s) | 732, 978 |
| TaqI | TCGA | 5 cut(s) | 228, 530, 581, 873, 1624 |
| TasI | AATT | 8 cut(s) | 39, 106, 238, 749, 901, 1113, 1125, 1381 |
| TatI | WGTACW | 1 cut(s) | 396 |
| TfiI | GAWTC | 6 cut(s) | 143, 599, 958, 1147, 1332, 1693 |
| Tru1I | TTAA | 7 cut(s) | 210, 402, 476, 693, 762, 768, 899 |
| Tru9I | TTAA | 7 cut(s) | 210, 402, 476, 693, 762, 768, 899 |
| TscAI | CASTG | 2 cut(s) | 394, 1293 |
| TseFI | GTSAC | 1 cut(s) | 1590 |
| TseI | GCWGC | 3 cut(s) | 34, 415, 1427 |
| Tsp45I | GTSAC | 1 cut(s) | 1590 |
| TspRI | CASTG | 2 cut(s) | 394, 1293 |
| Van91I | CCANNNNNTGG | 2 cut(s) | 652, 819 |
| VpaK11BI | GGWCC | 2 cut(s) | 643, 1297 |
| XapI | RAATTY | 3 cut(s) | 39, 238, 901 |
| XceI | RCATGY | 1 cut(s) | 641 |
| XhoI | CTCGAG | 1 cut(s) | 1623 |
| XspI | CTAG | 4 cut(s) | 260, 281, 323, 1706 |
| Zsp2I | ATGCAT | 2 cut(s) | 1271, 1540 |