60S ribosomal protein
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G23390 AT4G14320 AT4G14320 |
| fragaria_vesca | FvH4_3g06470 FvH4_3g06470 FvH4_3g06470 FvH4_3g06470 FvH4_3g06480 FvH4_5g17571 |
| malus_domestica | MD05G1293000.v1.1 MD05G1293100.v1.1 MD05G1293200.v1.1 MD06G1231700.v1.1 MD10G1269000.v1.1 MD10G1269100.v1.1 MD10G1269300.v1.1 MD14G1238400.v1.1 |
| prunus_persica | Prupe.4G072300_v2.0.a1 Prupe.4G072400_v2.0.a1 Prupe.5G235600_v2.0.a1 Prupe.5G235600_v2.0.a1 |
| pyrus_communis | pycom05g26950 pycom05g26960 pycom05g26970 pycom06g20570 pycom10g22540 pycom10g22550 |
| rosa_chinensis | RchiOBHm_Chr5g0012801 RchiOBHm_Chr5g0012811 RchiOBHm_Chr7g0178071 |
| rosa_laevigata | RLG00000005474 RLG00000031957 |
| rosa_multiflora | Rmu_sc0000425.1_g000006 Rmu_sc0002365.1_g000037 |
| rosa_roxburghii | Rroxscaffold_1G00063790 |
| rosa_rugosa | Rorug02G0285800 Rorug05G0004400 Rorug05G0004500 |
| rosa_samantha | Rh5AG098100 Rh5AG098200 Rh5BG095100 Rh5CG107000 Rh5DG093800 Rh7AG012500 Rh7BG012400 Rh7CG012400 Rh7DG012700 |
| rosa_wichuraiana | Rw5G008580 Rw5G008590 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AclI | AACGTT | 1 cut(s) | 9 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 181, 223 |
| AflIII | ACRYGT | 1 cut(s) | 235 |
| AgsI | TTSAA | 1 cut(s) | 275 |
| AjnI | CCWGG | 1 cut(s) | 222 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 155, 187 |
| Alw26I | GTCTC | 1 cut(s) | 279 |
| ApeKI | GCWGC | 1 cut(s) | 107 |
| AsuHPI | GGTGA | 1 cut(s) | 16 |
| AxyI | CCTNAGG | 1 cut(s) | 209 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 110, 142 |
| BbsI | GAAGAC | 2 cut(s) | 32, 163 |
| BbvI | GCAGC | 1 cut(s) | 94 |
| BciT130I | CCWGG | 1 cut(s) | 224 |
| BcoDI | GTCTC | 1 cut(s) | 279 |
| BfaI | CTAG | 1 cut(s) | 99 |
| BisI | GCNGC | 1 cut(s) | 108 |
| BlsI | GCNGC | 1 cut(s) | 109 |
| Bme1390I | CCNGG | 1 cut(s) | 224 |
| BmiI | GGNNCC | 1 cut(s) | 215 |
| BmrFI | CCNGG | 1 cut(s) | 224 |
| BpiI | GAAGAC | 2 cut(s) | 32, 163 |
| Bpu10I | CCTNAGC | 1 cut(s) | 111 |
| BsaJI | CCNNGG | 1 cut(s) | 223 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 181, 223 |
| Bse1I | ACTGG | 1 cut(s) | 167 |
| Bse21I | CCTNAGG | 1 cut(s) | 209 |
| BseBI | CCWGG | 1 cut(s) | 224 |
| BseDI | CCNNGG | 1 cut(s) | 223 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 181, 223 |
| BseMII | CTCAG | 2 cut(s) | 125, 200 |
| BseNI | ACTGG | 1 cut(s) | 167 |
| BseXI | GCAGC | 1 cut(s) | 94 |
| BseYI | CCCAGC | 1 cut(s) | 243 |
| Bsh1285I | CGRYCG | 1 cut(s) | 133 |
| BsiEI | CGRYCG | 1 cut(s) | 133 |
| BslFI | GGGAC | 1 cut(s) | 226 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 181, 223 |
| BsmAI | GTCTC | 1 cut(s) | 279 |
| BsmFI | GGGAC | 1 cut(s) | 226 |
| Bsp143I | GATC | 1 cut(s) | 130 |
| BspCNI | CTCAG | 2 cut(s) | 124, 201 |
| BspLI | GGNNCC | 1 cut(s) | 215 |
| BsrI | ACTGG | 1 cut(s) | 167 |
| BssECI | CCNNGG | 1 cut(s) | 223 |
| BssMI | GATC | 1 cut(s) | 130 |
| Bst2UI | CCWGG | 1 cut(s) | 224 |
| BstAPI | GCANNNNNTGC | 2 cut(s) | 48, 64 |
| BstC8I | GCNNGC | 2 cut(s) | 137, 266 |
| BstDEI | CTNAG | 3 cut(s) | 111, 195, 209 |
| BstKTI | GATC | 1 cut(s) | 133 |
| BstMAI | GTCTC | 1 cut(s) | 279 |
| BstMBI | GATC | 1 cut(s) | 130 |
| BstMCI | CGRYCG | 1 cut(s) | 133 |
| BstMWI | GCNNNNNNNGC | 4 cut(s) | 48, 64, 104, 228 |
| BstNI | CCWGG | 1 cut(s) | 224 |
| BstNSI | RCATGY | 1 cut(s) | 239 |
| BstSCI | CCNGG | 1 cut(s) | 222 |
| BstV1I | GCAGC | 1 cut(s) | 94 |
| BstV2I | GAAGAC | 2 cut(s) | 32, 163 |
| Bsu36I | CCTNAGG | 1 cut(s) | 209 |
| Cac8I | GCNNGC | 2 cut(s) | 137, 266 |
| CseI | GACGC | 1 cut(s) | 110 |
| CviAII | CATG | 1 cut(s) | 236 |
| CviJI | RGCY | 2 cut(s) | 98, 214 |
| CviKI_1 | RGCY | 2 cut(s) | 98, 214 |
| DdeI | CTNAG | 3 cut(s) | 111, 195, 209 |
| DpnI | GATC | 1 cut(s) | 132 |
| DpnII | GATC | 1 cut(s) | 130 |
| Eco81I | CCTNAGG | 1 cut(s) | 209 |
| EcoRII | CCWGG | 1 cut(s) | 222 |
| FaeI | CATG | 1 cut(s) | 239 |
| FaiI | YATR | 2 cut(s) | 150, 237 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 47, 79 |
| FaqI | GGGAC | 1 cut(s) | 226 |
| FatI | CATG | 1 cut(s) | 235 |
| Fnu4HI | GCNGC | 1 cut(s) | 108 |
| Fsp4HI | GCNGC | 1 cut(s) | 108 |
| FspBI | CTAG | 1 cut(s) | 99 |
| GluI | GCNGC | 1 cut(s) | 108 |
| GsaI | CCCAGC | 1 cut(s) | 247 |
| HgaI | GACGC | 1 cut(s) | 110 |
| Hin1II | CATG | 1 cut(s) | 239 |
| HphI | GGTGA | 1 cut(s) | 16 |
| Hpy166II | GTNNAC | 1 cut(s) | 7 |
| Hpy188I | TCNGA | 1 cut(s) | 159 |
| Hpy188III | TCNNGA | 2 cut(s) | 208, 256 |
| Hpy8I | GTNNAC | 1 cut(s) | 7 |
| Hpy99I | CGWCG | 1 cut(s) | 126 |
| HpyAV | CCTTC | 3 cut(s) | 175, 286, 292 |
| HpyCH4IV | ACGT | 1 cut(s) | 9 |
| HpyCH4V | TGCA | 5 cut(s) | 36, 51, 67, 231, 264 |
| HpyF10VI | GCNNNNNNNGC | 4 cut(s) | 48, 64, 104, 228 |
| HpyF3I | CTNAG | 3 cut(s) | 111, 195, 209 |
| HpySE526I | ACGT | 1 cut(s) | 9 |
| Hsp92II | CATG | 1 cut(s) | 239 |
| Kzo9I | GATC | 1 cut(s) | 130 |
| LmnI | GCTCC | 1 cut(s) | 219 |
| LpnPI | CCDG | 8 cut(s) | 75, 98, 129, 180, 209, 221, 236, 257 |
| Lsp1109I | GCAGC | 1 cut(s) | 94 |
| MaeI | CTAG | 1 cut(s) | 99 |
| MaeII | ACGT | 1 cut(s) | 9 |
| MaeIII | GTNAC | 2 cut(s) | 73, 125 |
| MalI | GATC | 1 cut(s) | 132 |
| MboI | GATC | 1 cut(s) | 130 |
| MboII | GAAGA | 3 cut(s) | 37, 163, 211 |
| MluCI | AATT | 1 cut(s) | 276 |
| MnlI | CCTC | 2 cut(s) | 204, 252 |
| MseI | TTAA | 1 cut(s) | 316 |
| MspR9I | CCNGG | 1 cut(s) | 224 |
| MvaI | CCWGG | 1 cut(s) | 224 |
| MwoI | GCNNNNNNNGC | 4 cut(s) | 48, 64, 104, 228 |
| NdeII | GATC | 1 cut(s) | 130 |
| NlaIII | CATG | 1 cut(s) | 239 |
| NlaIV | GGNNCC | 1 cut(s) | 215 |
| NspI | RCATGY | 1 cut(s) | 239 |
| PciI | ACATGT | 1 cut(s) | 235 |
| PkrI | GCNGC | 1 cut(s) | 109 |
| Ple19I | CGATCG | 1 cut(s) | 133 |
| PscI | ACATGT | 1 cut(s) | 235 |
| Psp1406I | AACGTT | 1 cut(s) | 9 |
| Psp6I | CCWGG | 1 cut(s) | 222 |
| PspFI | CCCAGC | 1 cut(s) | 243 |
| PspGI | CCWGG | 1 cut(s) | 222 |
| PspN4I | GGNNCC | 1 cut(s) | 215 |
| PvuI | CGATCG | 1 cut(s) | 133 |
| SaqAI | TTAA | 1 cut(s) | 316 |
| SatI | GCNGC | 1 cut(s) | 108 |
| Sau3AI | GATC | 1 cut(s) | 130 |
| ScrFI | CCNGG | 1 cut(s) | 224 |
| SetI | ASST | 4 cut(s) | 12, 65, 75, 263 |
| Sse9I | AATT | 1 cut(s) | 276 |
| SspMI | CTAG | 1 cut(s) | 99 |
| StyD4I | CCNGG | 1 cut(s) | 222 |
| TaiI | ACGT | 1 cut(s) | 12 |
| TasI | AATT | 1 cut(s) | 276 |
| Tru1I | TTAA | 1 cut(s) | 316 |
| Tru9I | TTAA | 1 cut(s) | 316 |
| TseI | GCWGC | 1 cut(s) | 107 |
| XceI | RCATGY | 1 cut(s) | 239 |
| XspI | CTAG | 1 cut(s) | 99 |