60S ribosomal protein
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G23390 AT4G14320 AT4G14320 |
| fragaria_vesca | FvH4_3g06470 FvH4_3g06470 FvH4_3g06470 FvH4_3g06470 FvH4_3g06480 FvH4_5g17571 |
| malus_domestica | MD05G1293000.v1.1 MD05G1293100.v1.1 MD05G1293200.v1.1 MD06G1231700.v1.1 MD10G1269000.v1.1 MD10G1269100.v1.1 MD10G1269300.v1.1 MD14G1238400.v1.1 |
| prunus_persica | Prupe.4G072300_v2.0.a1 Prupe.4G072400_v2.0.a1 Prupe.5G235600_v2.0.a1 Prupe.5G235600_v2.0.a1 |
| pyrus_communis | pycom05g26950 pycom05g26960 pycom05g26970 pycom06g20570 pycom10g22540 pycom10g22550 |
| rosa_chinensis | RchiOBHm_Chr5g0012801 RchiOBHm_Chr5g0012811 RchiOBHm_Chr7g0178071 |
| rosa_laevigata | RLG00000005474 RLG00000031957 |
| rosa_multiflora | Rmu_sc0000425.1_g000006 Rmu_sc0002365.1_g000037 |
| rosa_roxburghii | Rroxscaffold_1G00063790 |
| rosa_rugosa | Rorug02G0285800 Rorug05G0004400 Rorug05G0004500 |
| rosa_samantha | Rh5AG098100 Rh5AG098200 Rh5BG095100 Rh5CG107000 Rh5DG093800 Rh7AG012500 Rh7BG012400 Rh7CG012400 Rh7DG012700 |
| rosa_wichuraiana | Rw5G008580 Rw5G008590 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AclI | AACGTT | 1 cut(s) | 321 |
| AclWI | GGATC | 1 cut(s) | 230 |
| AfaI | GTAC | 1 cut(s) | 395 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 535 |
| AgsI | TTSAA | 1 cut(s) | 175 |
| AjnI | CCWGG | 1 cut(s) | 534 |
| AluBI | AGCT | 1 cut(s) | 50 |
| AluI | AGCT | 1 cut(s) | 50 |
| Alw26I | GTCTC | 2 cut(s) | 94, 591 |
| AlwI | GGATC | 1 cut(s) | 230 |
| AoxI | GGCC | 1 cut(s) | 495 |
| ApeKI | GCWGC | 2 cut(s) | 47, 419 |
| AsuHPI | GGTGA | 2 cut(s) | 84, 328 |
| BbsI | GAAGAC | 3 cut(s) | 12, 221, 344 |
| BbvI | GCAGC | 2 cut(s) | 59, 406 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 271, 305 |
| BciT130I | CCWGG | 1 cut(s) | 536 |
| BcoDI | GTCTC | 2 cut(s) | 94, 591 |
| BfmI | CTRYAG | 1 cut(s) | 237 |
| BisI | GCNGC | 2 cut(s) | 48, 420 |
| BlsI | GCNGC | 2 cut(s) | 49, 421 |
| Bme1390I | CCNGG | 1 cut(s) | 536 |
| BmiI | GGNNCC | 1 cut(s) | 527 |
| BmrFI | CCNGG | 1 cut(s) | 536 |
| BmrI | ACTGGG | 1 cut(s) | 228 |
| BmsI | GCATC | 2 cut(s) | 530, 568 |
| BmuI | ACTGGG | 1 cut(s) | 228 |
| BpiI | GAAGAC | 3 cut(s) | 12, 221, 344 |
| Bpu10I | CCTNAGC | 1 cut(s) | 423 |
| BsaJI | CCNNGG | 1 cut(s) | 535 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 535 |
| Bse1I | ACTGG | 3 cut(s) | 223, 265, 479 |
| BseBI | CCWGG | 1 cut(s) | 536 |
| BseDI | CCNNGG | 1 cut(s) | 535 |
| BseGI | GGATG | 3 cut(s) | 117, 545, 559 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 535 |
| BseMII | CTCAG | 3 cut(s) | 159, 437, 569 |
| BseNI | ACTGG | 3 cut(s) | 223, 265, 479 |
| BseXI | GCAGC | 2 cut(s) | 59, 406 |
| Bsh1285I | CGRYCG | 1 cut(s) | 445 |
| BshFI | GGCC | 1 cut(s) | 497 |
| BsiEI | CGRYCG | 1 cut(s) | 445 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 535 |
| BsmAI | GTCTC | 2 cut(s) | 94, 591 |
| BsnI | GGCC | 1 cut(s) | 497 |
| Bsp143I | GATC | 2 cut(s) | 222, 442 |
| BspANI | GGCC | 1 cut(s) | 497 |
| BspCNI | CTCAG | 3 cut(s) | 158, 436, 568 |
| BspLI | GGNNCC | 1 cut(s) | 527 |
| BspPI | GGATC | 1 cut(s) | 230 |
| BsrI | ACTGG | 3 cut(s) | 223, 265, 479 |
| BssECI | CCNNGG | 1 cut(s) | 535 |
| BssMI | GATC | 2 cut(s) | 222, 442 |
| Bst2UI | CCWGG | 1 cut(s) | 536 |
| Bst4CI | ACNGT | 2 cut(s) | 241, 393 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 376 |
| BstC8I | GCNNGC | 6 cut(s) | 203, 207, 361, 449, 545, 578 |
| BstDEI | CTNAG | 5 cut(s) | 145, 333, 423, 521, 555 |
| BstF5I | GGATG | 3 cut(s) | 117, 545, 559 |
| BstKTI | GATC | 2 cut(s) | 225, 445 |
| BstMAI | GTCTC | 2 cut(s) | 94, 591 |
| BstMBI | GATC | 2 cut(s) | 222, 442 |
| BstMCI | CGRYCG | 1 cut(s) | 445 |
| BstMWI | GCNNNNNNNGC | 4 cut(s) | 56, 186, 376, 540 |
| BstNI | CCWGG | 1 cut(s) | 536 |
| BstNSI | RCATGY | 1 cut(s) | 551 |
| BstSCI | CCNGG | 1 cut(s) | 534 |
| BstSFI | CTRYAG | 1 cut(s) | 237 |
| BstV1I | GCAGC | 2 cut(s) | 59, 406 |
| BstV2I | GAAGAC | 3 cut(s) | 12, 221, 344 |
| BsuRI | GGCC | 1 cut(s) | 497 |
| BtgZI | GCGATG | 2 cut(s) | 274, 603 |
| BtsCI | GGATG | 3 cut(s) | 117, 545, 559 |
| BtsIMutI | CAGTG | 1 cut(s) | 46 |
| Cac8I | GCNNGC | 6 cut(s) | 203, 207, 361, 449, 545, 578 |
| CseI | GACGC | 1 cut(s) | 422 |
| Csp6I | GTAC | 1 cut(s) | 394 |
| CviAII | CATG | 1 cut(s) | 548 |
| CviJI | RGCY | 6 cut(s) | 50, 201, 236, 478, 497, 526 |
| CviKI_1 | RGCY | 6 cut(s) | 50, 201, 236, 478, 497, 526 |
| CviQI | GTAC | 1 cut(s) | 394 |
| DdeI | CTNAG | 5 cut(s) | 145, 333, 423, 521, 555 |
| DpnI | GATC | 2 cut(s) | 224, 444 |
| DpnII | GATC | 2 cut(s) | 222, 442 |
| EcoRII | CCWGG | 1 cut(s) | 534 |
| FaeI | CATG | 1 cut(s) | 551 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 359, 391, 467, 499 |
| FatI | CATG | 1 cut(s) | 547 |
| Fnu4HI | GCNGC | 2 cut(s) | 48, 420 |
| FokI | GGATG | 3 cut(s) | 104, 546, 552 |
| Fsp4HI | GCNGC | 2 cut(s) | 48, 420 |
| GluI | GCNGC | 2 cut(s) | 48, 420 |
| HaeIII | GGCC | 1 cut(s) | 497 |
| HgaI | GACGC | 1 cut(s) | 422 |
| Hin1II | CATG | 1 cut(s) | 551 |
| HincII | GTYRAC | 1 cut(s) | 132 |
| HindII | GTYRAC | 1 cut(s) | 132 |
| HinfI | GANTC | 1 cut(s) | 114 |
| HphI | GGTGA | 2 cut(s) | 84, 328 |
| Hpy166II | GTNNAC | 2 cut(s) | 132, 319 |
| Hpy188I | TCNGA | 2 cut(s) | 122, 471 |
| Hpy188III | TCNNGA | 2 cut(s) | 147, 568 |
| Hpy8I | GTNNAC | 2 cut(s) | 132, 319 |
| Hpy99I | CGWCG | 1 cut(s) | 438 |
| HpyAV | CCTTC | 3 cut(s) | 394, 487, 598 |
| HpyCH4III | ACNGT | 2 cut(s) | 241, 393 |
| HpyCH4IV | ACGT | 1 cut(s) | 321 |
| HpyCH4V | TGCA | 7 cut(s) | 47, 74, 348, 363, 379, 543, 576 |
| HpyF10VI | GCNNNNNNNGC | 4 cut(s) | 56, 186, 376, 540 |
| HpyF3I | CTNAG | 5 cut(s) | 145, 333, 423, 521, 555 |
| HpySE526I | ACGT | 1 cut(s) | 321 |
| Hsp92II | CATG | 1 cut(s) | 551 |
| Kzo9I | GATC | 2 cut(s) | 222, 442 |
| LmnI | GCTCC | 1 cut(s) | 531 |
| Lsp1109I | GCAGC | 2 cut(s) | 59, 406 |
| LweI | GCATC | 2 cut(s) | 530, 568 |
| MaeII | ACGT | 1 cut(s) | 321 |
| MaeIII | GTNAC | 2 cut(s) | 385, 437 |
| MalI | GATC | 2 cut(s) | 224, 444 |
| MboI | GATC | 2 cut(s) | 222, 442 |
| MboII | GAAGA | 4 cut(s) | 12, 226, 349, 523 |
| MluCI | AATT | 5 cut(s) | 54, 140, 175, 244, 309 |
| MnlI | CCTC | 3 cut(s) | 200, 458, 564 |
| MseI | TTAA | 3 cut(s) | 108, 269, 312 |
| MslI | CAYNNNNRTG | 1 cut(s) | 230 |
| MspA1I | CMGCKG | 1 cut(s) | 50 |
| MspR9I | CCNGG | 1 cut(s) | 536 |
| MvaI | CCWGG | 1 cut(s) | 536 |
| MwoI | GCNNNNNNNGC | 4 cut(s) | 56, 186, 376, 540 |
| NdeII | GATC | 2 cut(s) | 222, 442 |
| NlaIII | CATG | 1 cut(s) | 551 |
| NlaIV | GGNNCC | 1 cut(s) | 527 |
| NspI | RCATGY | 1 cut(s) | 551 |
| PfeI | GAWTC | 1 cut(s) | 114 |
| PkrI | GCNGC | 2 cut(s) | 49, 421 |
| Ple19I | CGATCG | 1 cut(s) | 445 |
| Psp1406I | AACGTT | 1 cut(s) | 321 |
| Psp6I | CCWGG | 1 cut(s) | 534 |
| PspGI | CCWGG | 1 cut(s) | 534 |
| PspN4I | GGNNCC | 1 cut(s) | 527 |
| PvuI | CGATCG | 1 cut(s) | 445 |
| PvuII | CAGCTG | 1 cut(s) | 50 |
| RsaI | GTAC | 1 cut(s) | 395 |
| RsaNI | GTAC | 1 cut(s) | 394 |
| RseI | CAYNNNNRTG | 1 cut(s) | 230 |
| SaqAI | TTAA | 3 cut(s) | 108, 269, 312 |
| SatI | GCNGC | 2 cut(s) | 48, 420 |
| Sau3AI | GATC | 2 cut(s) | 222, 442 |
| ScrFI | CCNGG | 1 cut(s) | 536 |
| SetI | ASST | 9 cut(s) | 37, 52, 318, 324, 344, 377, 387, 469, 575 |
| SfaNI | GCATC | 2 cut(s) | 530, 568 |
| SfcI | CTRYAG | 1 cut(s) | 237 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 230 |
| Sse9I | AATT | 5 cut(s) | 54, 140, 175, 244, 309 |
| StyD4I | CCNGG | 1 cut(s) | 534 |
| TaaI | ACNGT | 2 cut(s) | 241, 393 |
| TaiI | ACGT | 1 cut(s) | 324 |
| TasI | AATT | 5 cut(s) | 54, 140, 175, 244, 309 |
| TatI | WGTACW | 1 cut(s) | 393 |
| TfiI | GAWTC | 1 cut(s) | 114 |
| Tru1I | TTAA | 3 cut(s) | 108, 269, 312 |
| Tru9I | TTAA | 3 cut(s) | 108, 269, 312 |
| TscAI | CASTG | 1 cut(s) | 46 |
| TseI | GCWGC | 2 cut(s) | 47, 419 |
| TspDTI | ATGAA | 2 cut(s) | 237, 277 |
| TspGWI | ACGGA | 1 cut(s) | 149 |
| TspRI | CASTG | 1 cut(s) | 46 |
| XceI | RCATGY | 1 cut(s) | 551 |