Prupe.4G128200_v2.0.a1

ALA-interacting subunit 3-like

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp04
Physical Location & Seq
Forward (+)
7055248 .. 7060315
5068 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.4G128200.1

Sequence Viewer

Length: 1062 bp
ATGAGTTCCAATACGGCGCCGTCTAGCTCAGGAGGCGCCGGATCTGCCGATCCAACATCTACCAGGAGGCATTCCAAGCGACCCAAATATTCAAGATTTACTCAGCAGGAACTTCCAGCGTGCAAGCCAATTCTCACGCCACGATGGGTGATCTCAGCATTCATGCTTGTAAGCATTGTCTTCATTCCCATCGGAGTTGTCTCCCTCTTTGCTTCTCGAGACGTTATTGAAATTATTGATCGGTATGAAACTGATTGCATACCAACGCCCTCTAGAAGTGATAAGGTCGGGTACATACAAGGCCCCGGAGATAAAAAATGCAACAGAACTCTGAAGGTAACTAAGAATATGAAGCATCCTATATATGTATATTACCAGCTGGATAATTTCTACCAGAATCATCGCAGGTATGTTAAAAGCCGAAGCGATCAACAGTTGAGAGATCCAAAGTCTGAAAATCAAGTGGATGCTTGTAAGCCTGAAGATAAGGCAGGTGGTCAACCTGTTGTGCCTTGTGGTCTTATAGCTTGGAGTTTGTTCAACGACACCTATAGTTTTTCACGCAAGAAGCAGCAATCGACGGTGCCATTGACGGTGAACAAGAAGGATATCTCATGGAAGAGTGATAGGGATCACAAGTTTGGCAAAAAAGTCTTTCCAAAGAACTTTCAGAATGGAACTCTTAGAGGTGGTGCGTCTCTCGATGCATCCAAACCATTAAGTGATCAAGAGGACCTTATTGTTTGGATGAGAACTGCTGCACTGCCAACATTTAGAAAGTTGTATGGGAAGATTGAGGTGGATTTGGAAGCAGGTGATGAATTACACGTGACGTTGGAGAACAATTACAACACATACAGTTTTAATGGAAAAAAGAAGCTCGTGCTTTCTACCACTAGTTGGATTGGTGGCAGGAATGACTTCCTTGGCATTGCTTATCTCACTGTTGGTGGGTTGTGCTTCTTTCTGGCCATGGCTTTCACAGTTGTATATCTTGTTAAGCCAAGGCAACTTGGAGATCCATCTTATCTGTCATGGAACAGAAATCCAGGAGGGCACTAA

Protein Analysis

354

Amino Acids

39.74

Weight (kDa)

9.58

Isoelectric Point (pI)

38.37

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 2 cut(s) 482, 803
Acc36I ACCTGC 3 cut(s) 396, 482, 803
AccB1I GGYRCC 3 cut(s) 16, 35, 583
AccB7I CCANNNNNTGG 1 cut(s) 900
AclWI GGATC 5 cut(s) 44, 49, 437, 639, 1013
AcoI YGGCCR 1 cut(s) 969
AcuI CTGAAG 2 cut(s) 353, 501
AcvI CACGTG 1 cut(s) 829
AcyI GRCGYC 2 cut(s) 17, 36
AfaI GTAC 1 cut(s) 293
AfiI CCNNNNNNNGG 1 cut(s) 900
AflIII ACRYGT 1 cut(s) 826
AgsI TTSAA 3 cut(s) 93, 230, 541
AhlI ACTAGT 1 cut(s) 896
AjnI CCWGG 2 cut(s) 62, 1048
AluBI AGCT 4 cut(s) 27, 379, 527, 880
AluI AGCT 4 cut(s) 27, 379, 527, 880
Alw26I GTCTC 3 cut(s) 205, 213, 702
AlwI GGATC 5 cut(s) 44, 49, 437, 639, 1013
Ama87I CYCGRG 1 cut(s) 216
AoxI GGCC 2 cut(s) 301, 969
ApeKI GCWGC 2 cut(s) 571, 758
Asp700I GAANNNNTTC 1 cut(s) 920
AspLEI GCGC 2 cut(s) 19, 38
AspS9I GGNCC 2 cut(s) 302, 733
AsuC2I CCSGG 1 cut(s) 306
AsuHPI GGTGA 3 cut(s) 160, 607, 827
AvaI CYCGRG 1 cut(s) 216
AvaII GGWCC 1 cut(s) 733
BaeGI GKGCMC 1 cut(s) 1059
BalI TGGCCA 1 cut(s) 971
BanI GGYRCC 3 cut(s) 16, 35, 583
BauI CACGAG 1 cut(s) 881
BbrPI CACGTG 1 cut(s) 829
BbsI GAAGAC 1 cut(s) 172
BbvI GCAGC 2 cut(s) 583, 745
BccI CCATC 3 cut(s) 138, 197, 1030
BceAI ACGGC 2 cut(s) 4, 30
BciT130I CCWGG 2 cut(s) 64, 1050
BclI TGATCA 1 cut(s) 724
BcnI CCSGG 1 cut(s) 306
BcoDI GTCTC 3 cut(s) 205, 213, 702
BcuI ACTAGT 1 cut(s) 896
BfaI CTAG 3 cut(s) 24, 273, 897
BfmI CTRYAG 1 cut(s) 550
BfoI RGCGCY 2 cut(s) 20, 39
BfuAI ACCTGC 3 cut(s) 396, 482, 803
BisI GCNGC 2 cut(s) 572, 759
BlsI GCNGC 2 cut(s) 573, 760
Bme1390I CCNGG 3 cut(s) 64, 306, 1050
Bme18I GGWCC 1 cut(s) 733
BmeT110I CYCGRG 1 cut(s) 216
BmgT120I GGNCC 2 cut(s) 302, 733
BmiI GGNNCC 4 cut(s) 18, 37, 304, 585
BmrFI CCNGG 3 cut(s) 64, 306, 1050
BmsI GCATC 4 cut(s) 364, 457, 694, 716
BpiI GAAGAC 1 cut(s) 172
Bpu10I CCTNAGC 1 cut(s) 28
BpuMI CCSGG 1 cut(s) 306
BsaAI YACGTR 1 cut(s) 829
BsaBI GATNNNNATC 1 cut(s) 630
BsaHI GRCGYC 2 cut(s) 17, 36
BsaJI CCNNGG 4 cut(s) 304, 925, 972, 1004
Bsc4I CCNNNNNNNGG 1 cut(s) 900
Bse3DI GCAATG 1 cut(s) 930
Bse8I GATNNNNATC 1 cut(s) 630
BseBI CCWGG 2 cut(s) 64, 1050
BseDI CCNNGG 4 cut(s) 304, 925, 972, 1004
BseGI GGATG 4 cut(s) 355, 472, 707, 753
BseJI GATNNNNATC 1 cut(s) 630
BseLI CCNNNNNNNGG 1 cut(s) 900
BseMI GCAATG 1 cut(s) 930
BseMII CTCAG 3 cut(s) 42, 116, 168
BseSI GKGCMC 1 cut(s) 1059
BseXI GCAGC 2 cut(s) 583, 745
BsgI GTGCAG 1 cut(s) 744
BshFI GGCC 2 cut(s) 303, 971
BshNI GGYRCC 3 cut(s) 16, 35, 583
BsiHKCI CYCGRG 1 cut(s) 216
BsiSI CCGG 2 cut(s) 39, 306
BslI CCNNNNNNNGG 1 cut(s) 900
BsmAI GTCTC 3 cut(s) 205, 213, 702
BsmBI CGTCTC 2 cut(s) 213, 702
BsmI GAATGC 2 cut(s) 70, 158
BsnI GGCC 2 cut(s) 303, 971
BsoBI CYCGRG 1 cut(s) 216
Bsp1286I GDGCHC 1 cut(s) 1059
Bsp143I GATC 9 cut(s) 41, 49, 150, 238, 427, 442, 631, 724, 1018
Bsp19I CCATGG 1 cut(s) 972
BspANI GGCC 2 cut(s) 303, 971
BspCNI CTCAG 3 cut(s) 41, 115, 167
BspLI GGNNCC 4 cut(s) 18, 37, 304, 585
BspMI ACCTGC 3 cut(s) 396, 482, 803
BspPI GGATC 5 cut(s) 44, 49, 437, 639, 1013
BspT107I GGYRCC 3 cut(s) 16, 35, 583
BsrDI GCAATG 1 cut(s) 930
BssECI CCNNGG 4 cut(s) 304, 925, 972, 1004
BssMI GATC 9 cut(s) 41, 49, 150, 238, 427, 442, 631, 724, 1018
BssNI GRCGYC 2 cut(s) 17, 36
BssSI CACGAG 1 cut(s) 881
BssT1I CCWWGG 3 cut(s) 925, 972, 1004
Bst2BI CACGAG 1 cut(s) 881
Bst2UI CCWGG 2 cut(s) 64, 1050
Bst4CI ACNGT 6 cut(s) 435, 583, 595, 860, 946, 985
Bst6I CTCTTC 1 cut(s) 614
BstACI GRCGYC 2 cut(s) 17, 36
BstBAI YACGTR 1 cut(s) 829
BstC8I GCNNGC 2 cut(s) 121, 125
BstDEI CTNAG 5 cut(s) 28, 102, 154, 342, 683
BstDSI CCRYGG 1 cut(s) 972
BstF5I GGATG 4 cut(s) 355, 472, 707, 753
BstH2I RGCGCY 2 cut(s) 20, 39
BstHHI GCGC 2 cut(s) 19, 38
BstKTI GATC 9 cut(s) 44, 52, 153, 241, 430, 445, 634, 727, 1021
BstMAI GTCTC 3 cut(s) 205, 213, 702
BstMBI GATC 9 cut(s) 41, 49, 150, 238, 427, 442, 631, 724, 1018
BstMWI GCNNNNNNNGC 3 cut(s) 33, 44, 76
BstNI CCWGG 2 cut(s) 64, 1050
BstSCI CCNGG 3 cut(s) 62, 304, 1048
BstSFI CTRYAG 1 cut(s) 550
BstSLI GKGCMC 1 cut(s) 1059
BstV1I GCAGC 2 cut(s) 583, 745
BstV2I GAAGAC 1 cut(s) 172
BstX2I RGATCY 3 cut(s) 41, 442, 1018
BstYI RGATCY 3 cut(s) 41, 442, 1018
BsuRI GGCC 2 cut(s) 303, 971
BtgI CCRYGG 1 cut(s) 972
BtgZI GCGATG 1 cut(s) 386
BtsCI GGATG 4 cut(s) 355, 472, 707, 753
BtsI GCAGTG 1 cut(s) 761
BtsIMutI CAGTG 2 cut(s) 761, 942
BveI ACCTGC 3 cut(s) 396, 482, 803
Cac8I GCNNGC 2 cut(s) 121, 125
CfoI GCGC 2 cut(s) 19, 38
Cfr13I GGNCC 2 cut(s) 302, 733
CseI GACGC 1 cut(s) 684
Csp6I GTAC 1 cut(s) 292
CviAII CATG 4 cut(s) 163, 615, 973, 1035
CviQI GTAC 1 cut(s) 292
DdeI CTNAG 5 cut(s) 28, 102, 154, 342, 683
DinI GGCGCC 2 cut(s) 18, 37
DpnI GATC 9 cut(s) 43, 51, 152, 240, 429, 444, 633, 726, 1020
DpnII GATC 9 cut(s) 41, 49, 150, 238, 427, 442, 631, 724, 1018
EaeI YGGCCR 1 cut(s) 969
Eam1104I CTCTTC 1 cut(s) 614
EarI CTCTTC 1 cut(s) 614
Eco130I CCWWGG 3 cut(s) 925, 972, 1004
Eco32I GATATC 1 cut(s) 610
Eco47I GGWCC 1 cut(s) 733
Eco57I CTGAAG 2 cut(s) 353, 501
Eco72I CACGTG 1 cut(s) 829
Eco88I CYCGRG 1 cut(s) 216
EcoO109I RGGNCCY 2 cut(s) 302, 733
EcoRII CCWGG 2 cut(s) 62, 1048
EcoRV GATATC 1 cut(s) 610
EcoT14I CCWWGG 3 cut(s) 925, 972, 1004
EcoT22I ATGCAT 1 cut(s) 709
EgeI GGCGCC 2 cut(s) 18, 37
EheI GGCGCC 2 cut(s) 18, 37
ErhI CCWWGG 3 cut(s) 925, 972, 1004
Esp3I CGTCTC 2 cut(s) 213, 702
FaeI CATG 4 cut(s) 166, 618, 976, 1038
FalI AAGNNNNNCTT 2 cut(s) 720, 752
FatI CATG 4 cut(s) 162, 614, 972, 1034
FbaI TGATCA 1 cut(s) 724
Fnu4HI GCNGC 2 cut(s) 572, 759
FokI GGATG 4 cut(s) 342, 479, 694, 760
Fsp4HI GCNGC 2 cut(s) 572, 759
FspBI CTAG 3 cut(s) 24, 273, 897
GlaI GCGC 2 cut(s) 18, 37
GluI GCNGC 2 cut(s) 572, 759
HaeII RGCGCY 2 cut(s) 20, 39
HaeIII GGCC 2 cut(s) 303, 971
HapII CCGG 2 cut(s) 39, 306
HgaI GACGC 1 cut(s) 684
HhaI GCGC 2 cut(s) 19, 38
Hin1I GRCGYC 2 cut(s) 17, 36
Hin1II CATG 4 cut(s) 166, 618, 976, 1038
Hin6I GCGC 2 cut(s) 17, 36
HinP1I GCGC 2 cut(s) 17, 36
HincII GTYRAC 1 cut(s) 500
HindII GTYRAC 1 cut(s) 500
HinfI GANTC 1 cut(s) 397
HpaII CCGG 2 cut(s) 39, 306
HphI GGTGA 3 cut(s) 160, 607, 827
Hpy166II GTNNAC 2 cut(s) 500, 598
Hpy188I TCNGA 4 cut(s) 194, 333, 454, 672
Hpy188III TCNNGA 7 cut(s) 30, 93, 216, 218, 273, 701, 728
Hpy8I GTNNAC 2 cut(s) 500, 598
Hpy99I CGWCG 1 cut(s) 583
HpyAV CCTTC 2 cut(s) 328, 598
HpyCH4III ACNGT 6 cut(s) 435, 583, 595, 860, 946, 985
HpyCH4IV ACGT 3 cut(s) 222, 828, 833
HpyCH4V TGCA 5 cut(s) 123, 258, 321, 707, 761
HpyF10VI GCNNNNNNNGC 3 cut(s) 33, 44, 76
HpyF3I CTNAG 5 cut(s) 28, 102, 154, 342, 683
HpySE526I ACGT 3 cut(s) 222, 828, 833
Hsp92I GRCGYC 2 cut(s) 17, 36
Hsp92II CATG 4 cut(s) 166, 618, 976, 1038
HspAI GCGC 2 cut(s) 17, 36
KasI GGCGCC 2 cut(s) 16, 35
Ksp22I TGATCA 1 cut(s) 724
Kzo9I GATC 9 cut(s) 41, 49, 150, 238, 427, 442, 631, 724, 1018
Lsp1109I GCAGC 2 cut(s) 583, 745
LweI GCATC 4 cut(s) 364, 457, 694, 716
MaeI CTAG 3 cut(s) 24, 273, 897
MaeII ACGT 3 cut(s) 222, 828, 833
MaeIII GTNAC 2 cut(s) 337, 829
MalI GATC 9 cut(s) 43, 51, 152, 240, 429, 444, 633, 726, 1020
MboI GATC 9 cut(s) 41, 49, 150, 238, 427, 442, 631, 724, 1018
MboII GAAGA 4 cut(s) 172, 494, 631, 802
MflI RGATCY 3 cut(s) 41, 442, 1018
MhlI GDGCHC 1 cut(s) 1059
MlsI TGGCCA 1 cut(s) 971
MluCI AATT 5 cut(s) 129, 231, 385, 821, 844
MluNI TGGCCA 1 cut(s) 971
Mly113I GGCGCC 2 cut(s) 17, 36
MmeI TCCRAC 3 cut(s) 77, 816, 881
MnlI CCTC 8 cut(s) 26, 60, 215, 280, 680, 724, 790, 1046
Mox20I TGGCCA 1 cut(s) 971
Mph1103I ATGCAT 1 cut(s) 709
MroXI GAANNNNTTC 1 cut(s) 920
MscI TGGCCA 1 cut(s) 971
MseI TTAA 4 cut(s) 414, 719, 864, 999
Msp20I TGGCCA 1 cut(s) 971
MspA1I CMGCKG 1 cut(s) 379
MspI CCGG 2 cut(s) 39, 306
MspR9I CCNGG 3 cut(s) 64, 306, 1050
Mva1269I GAATGC 2 cut(s) 70, 158
MvaI CCWGG 2 cut(s) 64, 1050
MwoI GCNNNNNNNGC 3 cut(s) 33, 44, 76
NarI GGCGCC 2 cut(s) 17, 36
NciI CCSGG 1 cut(s) 306
NcoI CCATGG 1 cut(s) 972
NdeII GATC 9 cut(s) 41, 49, 150, 238, 427, 442, 631, 724, 1018
NlaIII CATG 4 cut(s) 166, 618, 976, 1038
NlaIV GGNNCC 4 cut(s) 18, 37, 304, 585
NmuCI GTSAC 1 cut(s) 829
NsiI ATGCAT 1 cut(s) 709
PaeR7I CTCGAG 1 cut(s) 216
PaqCI CACCTGC 2 cut(s) 482, 803
PctI GAATGC 2 cut(s) 70, 158
PdmI GAANNNNTTC 1 cut(s) 920
PfeI GAWTC 1 cut(s) 397
PflMI CCANNNNNTGG 1 cut(s) 900
PfoI TCCNGGA 1 cut(s) 1048
PkrI GCNGC 2 cut(s) 573, 760
PluTI GGCGCC 2 cut(s) 20, 39
PmaCI CACGTG 1 cut(s) 829
PmlI CACGTG 1 cut(s) 829
Ppu21I YACGTR 1 cut(s) 829
PpuMI RGGWCCY 1 cut(s) 733
Psp5II RGGWCCY 1 cut(s) 733
Psp6I CCWGG 2 cut(s) 62, 1048
PspCI CACGTG 1 cut(s) 829
PspGI CCWGG 2 cut(s) 62, 1048
PspN4I GGNNCC 4 cut(s) 18, 37, 304, 585
PspPI GGNCC 2 cut(s) 302, 733
PspPPI RGGWCCY 1 cut(s) 733
PsuI RGATCY 3 cut(s) 41, 442, 1018
PvuII CAGCTG 1 cut(s) 379
RsaI GTAC 1 cut(s) 293
RsaNI GTAC 1 cut(s) 292
SaqAI TTAA 4 cut(s) 414, 719, 864, 999
SatI GCNGC 2 cut(s) 572, 759
Sau3AI GATC 9 cut(s) 41, 49, 150, 238, 427, 442, 631, 724, 1018
Sau96I GGNCC 2 cut(s) 302, 733
ScrFI CCNGG 3 cut(s) 64, 306, 1050
SduI GDGCHC 1 cut(s) 1059
SfaNI GCATC 4 cut(s) 364, 457, 694, 716
SfcI CTRYAG 1 cut(s) 550
SfoI GGCGCC 2 cut(s) 18, 37
Sfr274I CTCGAG 1 cut(s) 216
SinI GGWCC 1 cut(s) 733
SlaI CTCGAG 1 cut(s) 216
SmlI CTYRAG 1 cut(s) 216
SmoI CTYRAG 1 cut(s) 216
SpeI ACTAGT 1 cut(s) 896
Sse9I AATT 5 cut(s) 129, 231, 385, 821, 844
SspDI GGCGCC 2 cut(s) 16, 35
SspI AATATT 1 cut(s) 89
SspMI CTAG 3 cut(s) 24, 273, 897
StyD4I CCNGG 3 cut(s) 62, 304, 1048
StyI CCWWGG 3 cut(s) 925, 972, 1004
TaaI ACNGT 6 cut(s) 435, 583, 595, 860, 946, 985
TaiI ACGT 3 cut(s) 225, 831, 836
TaqI TCGA 3 cut(s) 217, 578, 702
TasI AATT 5 cut(s) 129, 231, 385, 821, 844
TfiI GAWTC 1 cut(s) 397
Tru1I TTAA 4 cut(s) 414, 719, 864, 999
Tru9I TTAA 4 cut(s) 414, 719, 864, 999
TscAI CASTG 2 cut(s) 768, 949
TseFI GTSAC 1 cut(s) 829
TseI GCWGC 2 cut(s) 571, 758
Tsp45I GTSAC 1 cut(s) 829
TspDTI ATGAA 5 cut(s) 151, 172, 261, 365, 834
TspRI CASTG 2 cut(s) 768, 949
Van91I CCANNNNNTGG 1 cut(s) 900
VpaK11BI GGWCC 1 cut(s) 733
XbaI TCTAGA 1 cut(s) 272
XhoI CTCGAG 1 cut(s) 216
XmnI GAANNNNTTC 1 cut(s) 920
XspI CTAG 3 cut(s) 24, 273, 897
Zsp2I ATGCAT 1 cut(s) 709
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.