Prupe.4G140500_v2.0.a1

glycosyltransferase 7

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp04
OG0001277
Physical Location & Seq
Forward (+)
7854929 .. 7856700
1772 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.4G140500.1

Sequence Viewer

Length: 1320 bp
ATGGGTTCATCAGAATTCTCTCTGTTTCAACAATCACCTAAGAAAAGATCAGTTTTTCACAAGGCCCCTTCTCTAATTGCAGATGGGTTTCTTTTTGTTGGAGGTGCATCAATGGCGTTGTCTCTGGTTTGGGCTCTGCTCACCTTCATCAACCCCAGCACCAGCATCGACAACATCATCACCTGGAGCACGGGTGGTTGCGGCCCGGACTTGGGCTCCGACCCATCTGAGCCCACATTCTACGACGACCCGAATCTCAGCTACGCATTCGGGGAAGAACCAATGAAGGATTGGGATTTGAAGCGCAGAGAATGGCTCAAGCTTCACCCTTCTTTTGCTGCAAGTGAAGAAAAAGTTCTTCTTGTAACTGGGTCTCAGCCAAACGTGTGCAAAAACCCAGTTGGTGATCATTTGCAGCTGAGGCTGTTCAAGAACAAAGTTGATTACTGTAGAATTCATGGGCATGAAATATTTTACAACAATGTTTTGCTGAACCAGAAAGGGACTGGCTTTTGGGCCAAATACCCACTTCTCAGAGCTTCCATGTTGGCTCATCCTGAGGCCGAGTGGATCTGGTGGGTCGACTCGGATGCCATTCTCACAGACATGGAGTTCAAGCTGCCATTAGAGAGGTACAAAGATCATAACTTGGTTGTGCATGGATGGTGGAATATGCTGTATGAGGAGAAGAGCTGGACAAGTCTCAATGCTGGTGTGTTGTTGATCAGGAACTGCCAGTGGTCCATGGACTTGATGGAAAGATGGACCAGCATGGGCCCACAGAACCCTGACCATGAAAAATGGGGAAAAGCCCAAAAGTCATTGATCAAGGACAAGGCATATCCTGGGTCAGATGATCAGTCGGCTCTGATTTACCTCCTCATAAAAGAGAAGGACAGGTGGGCGGACAGGATTTACTTGGAGAGTGAGTACAACTTGCATGGGTACTGGTTGGGCATAGTGGATGGGCTTGACAAGATCAGCAAAGGGTACATGGAGATTGACAGAGAGGTGGATTTGCTGAGGAGAAGGCATGCAGAGAAGATGAGCTTGTTTTATGGTGCAATGAGAGAGAAGCATATGAAAGATAGAGGCTTTTGGAAAGAGAATGTGAGGAGGCCCTTTGTGACACATTTCACTGGCTGTGAGCCTTGCAGTGGAGAGCACAACTCCATGTATACTTGGGAGGCTTGTTGGAATGGGATGCAGAAGGCTTTGAATTTTGCAGACAATCAAGTGCTTAGCAGATTTGGGTTTGTGCATCCAGACCTACTTAACTCATCTTTGGTGTCTCCCCTGCCATTTGATTTCCCTGCTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Glyco_transf_34

Protein Analysis

440

Amino Acids

50.75

Weight (kDa)

6.12

Isoelectric Point (pI)

40.5

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 2 cut(s) 582, 1178
AciI CCGC 2 cut(s) 201, 905
AclWI GGATC 1 cut(s) 578
AcsI RAATTY 3 cut(s) 14, 453, 1219
AfaI GTAC 4 cut(s) 635, 932, 947, 992
AfiI CCNNNNNNNGG 3 cut(s) 211, 212, 1157
AflIII ACRYGT 1 cut(s) 384
AgsI TTSAA 5 cut(s) 29, 301, 430, 616, 1219
AjnI CCWGG 2 cut(s) 182, 844
AluBI AGCT 7 cut(s) 261, 322, 418, 539, 619, 693, 1050
AluI AGCT 7 cut(s) 261, 322, 418, 539, 619, 693, 1050
Alw21I GWGCWC 2 cut(s) 191, 1167
Alw26I GTCTC 4 cut(s) 126, 378, 707, 1296
AlwI GGATC 1 cut(s) 578
AlwNI CAGNNNCTG 1 cut(s) 732
AoxI GGCC 6 cut(s) 63, 202, 516, 561, 775, 1118
ApaI GGGCCC 1 cut(s) 779
ApeKI GCWGC 3 cut(s) 338, 415, 619
ApoI RAATTY 3 cut(s) 14, 453, 1219
Asp700I GAANNNNTTC 1 cut(s) 354
AspLEI GCGC 1 cut(s) 306
AspS9I GGNCC 8 cut(s) 64, 203, 516, 741, 765, 775, 776, 1119
AsuC2I CCSGG 1 cut(s) 206
AsuHPI GGTGA 5 cut(s) 27, 133, 172, 317, 416
AvaII GGWCC 2 cut(s) 741, 765
AxyI CCTNAGG 1 cut(s) 558
BaeGI GKGCMC 1 cut(s) 779
BanII GRGCYC 4 cut(s) 136, 218, 234, 779
Bbv12I GWGCWC 2 cut(s) 191, 1167
BbvCI CCTCAGC 2 cut(s) 419, 1022
BbvI GCAGC 3 cut(s) 325, 427, 606
BccI CCATC 6 cut(s) 77, 232, 657, 748, 756, 959
BcgI CGANNNNNNTGC 4 cut(s) 148, 182, 572, 606
BciT130I CCWGG 2 cut(s) 184, 846
BclI TGATCA 4 cut(s) 406, 723, 825, 856
BcnI CCSGG 1 cut(s) 206
BcoDI GTCTC 4 cut(s) 126, 378, 707, 1296
BfmI CTRYAG 1 cut(s) 448
BisI GCNGC 4 cut(s) 202, 339, 416, 620
BlpI GCTNAGC 1 cut(s) 1241
BlsI GCNGC 4 cut(s) 203, 340, 417, 621
Bme1390I CCNGG 3 cut(s) 184, 206, 846
Bme18I GGWCC 2 cut(s) 741, 765
BmgT120I GGNCC 8 cut(s) 64, 203, 516, 741, 765, 775, 776, 1119
BmiI GGNNCC 3 cut(s) 66, 217, 777
BmrFI CCNGG 3 cut(s) 184, 206, 846
BmrI ACTGGG 2 cut(s) 378, 392
BmsI GCATC 5 cut(s) 116, 174, 580, 1194, 1270
BmuI ACTGGG 2 cut(s) 378, 392
BplI GAGNNNNNCTC 4 cut(s) 300, 332, 1154, 1186
BpmI CTGGAG 1 cut(s) 205
Bpu10I CCTNAGC 2 cut(s) 419, 1022
Bpu1102I GCTNAGC 1 cut(s) 1241
BpuEI CTTGAG 1 cut(s) 302
BpuMI CCSGG 1 cut(s) 206
BsaI GGTCTC 1 cut(s) 378
BsaJI CCNNGG 2 cut(s) 744, 845
BsaXI ACNNNNNCTCC 6 cut(s) 178, 200, 208, 230, 914, 944
Bsc4I CCNNNNNNNGG 3 cut(s) 211, 212, 1157
Bse1I ACTGG 6 cut(s) 373, 398, 511, 736, 953, 1144
Bse21I CCTNAGG 1 cut(s) 558
Bse3DI GCAATG 1 cut(s) 1071
BseBI CCWGG 2 cut(s) 184, 846
BseDI CCNNGG 2 cut(s) 744, 845
BseGI GGATG 6 cut(s) 553, 595, 668, 970, 1209, 1261
BseLI CCNNNNNNNGG 3 cut(s) 211, 212, 1157
BseMI GCAATG 1 cut(s) 1071
BseMII CTCAG 7 cut(s) 219, 271, 389, 410, 547, 549, 1013
BseNI ACTGG 6 cut(s) 373, 398, 511, 736, 953, 1144
BseRI GAGGAG 4 cut(s) 698, 869, 1039, 1129
BseSI GKGCMC 1 cut(s) 779
BseXI GCAGC 3 cut(s) 325, 427, 606
BseYI CCCAGC 1 cut(s) 155
BshFI GGCC 6 cut(s) 65, 204, 518, 563, 777, 1120
BsiHKAI GWGCWC 2 cut(s) 191, 1167
BsiSI CCGG 1 cut(s) 206
BslFI GGGAC 1 cut(s) 517
BslI CCNNNNNNNGG 3 cut(s) 211, 212, 1157
BsmAI GTCTC 4 cut(s) 126, 378, 707, 1296
BsmFI GGGAC 1 cut(s) 517
BsmI GAATGC 1 cut(s) 266
BsnI GGCC 6 cut(s) 65, 204, 518, 563, 777, 1120
Bso31I GGTCTC 1 cut(s) 378
Bsp120I GGGCCC 1 cut(s) 775
Bsp1286I GDGCHC 6 cut(s) 136, 191, 218, 234, 779, 1167
Bsp143I GATC 8 cut(s) 47, 406, 570, 640, 723, 825, 856, 978
Bsp1720I GCTNAGC 1 cut(s) 1241
Bsp19I CCATGG 1 cut(s) 744
BspACI CCGC 2 cut(s) 201, 905
BspANI GGCC 6 cut(s) 65, 204, 518, 563, 777, 1120
BspCNI CTCAG 7 cut(s) 220, 270, 388, 411, 546, 550, 1014
BspLI GGNNCC 3 cut(s) 66, 217, 777
BspPI GGATC 1 cut(s) 578
BspQI GCTCTTC 1 cut(s) 683
BspTNI GGTCTC 1 cut(s) 378
BsrDI GCAATG 1 cut(s) 1071
BsrI ACTGG 6 cut(s) 373, 398, 511, 736, 953, 1144
BssECI CCNNGG 2 cut(s) 744, 845
BssMI GATC 8 cut(s) 47, 406, 570, 640, 723, 825, 856, 978
BssNAI GTATAC 1 cut(s) 1179
BssT1I CCWWGG 1 cut(s) 744
Bst1107I GTATAC 1 cut(s) 1179
Bst2UI CCWGG 2 cut(s) 184, 846
Bst4CI ACNGT 1 cut(s) 449
Bst6I CTCTTC 1 cut(s) 683
BstC8I GCNNGC 1 cut(s) 1035
BstDEI CTNAG 9 cut(s) 39, 228, 257, 375, 419, 533, 558, 1022, 1241
BstDSI CCRYGG 1 cut(s) 744
BstF5I GGATG 6 cut(s) 553, 595, 668, 970, 1209, 1261
BstHHI GCGC 1 cut(s) 306
BstKTI GATC 8 cut(s) 50, 409, 573, 643, 726, 828, 859, 981
BstMAI GTCTC 4 cut(s) 126, 378, 707, 1296
BstMBI GATC 8 cut(s) 47, 406, 570, 640, 723, 825, 856, 978
BstMWI GCNNNNNNNGC 2 cut(s) 113, 421
BstNI CCWGG 2 cut(s) 184, 846
BstNSI RCATGY 1 cut(s) 1037
BstSCI CCNGG 3 cut(s) 182, 204, 844
BstSFI CTRYAG 1 cut(s) 448
BstSLI GKGCMC 1 cut(s) 779
BstV1I GCAGC 3 cut(s) 325, 427, 606
BstX2I RGATCY 1 cut(s) 570
BstYI RGATCY 1 cut(s) 570
BstZ17I GTATAC 1 cut(s) 1179
Bsu36I CCTNAGG 1 cut(s) 558
BsuRI GGCC 6 cut(s) 65, 204, 518, 563, 777, 1120
BtgI CCRYGG 1 cut(s) 744
BtsCI GGATG 6 cut(s) 553, 595, 668, 970, 1209, 1261
BtsI GCAGTG 1 cut(s) 1162
BtsIMutI CAGTG 3 cut(s) 743, 1137, 1162
Cac8I GCNNGC 1 cut(s) 1035
CaiI CAGNNNCTG 1 cut(s) 732
CfoI GCGC 1 cut(s) 306
Cfr13I GGNCC 8 cut(s) 64, 203, 516, 741, 765, 775, 776, 1119
Csp6I GTAC 4 cut(s) 634, 931, 946, 991
CviQI GTAC 4 cut(s) 634, 931, 946, 991
DdeI CTNAG 9 cut(s) 39, 228, 257, 375, 419, 533, 558, 1022, 1241
DpnI GATC 8 cut(s) 49, 408, 572, 642, 725, 827, 858, 980
DpnII GATC 8 cut(s) 47, 406, 570, 640, 723, 825, 856, 978
Eam1104I CTCTTC 1 cut(s) 683
EarI CTCTTC 1 cut(s) 683
EciI GGCGGA 1 cut(s) 920
Eco130I CCWWGG 1 cut(s) 744
Eco24I GRGCYC 4 cut(s) 136, 218, 234, 779
Eco31I GGTCTC 1 cut(s) 378
Eco47I GGWCC 2 cut(s) 741, 765
Eco81I CCTNAGG 1 cut(s) 558
EcoO109I RGGNCCY 2 cut(s) 64, 1119
EcoRI GAATTC 2 cut(s) 14, 453
EcoRII CCWGG 2 cut(s) 182, 844
EcoT14I CCWWGG 1 cut(s) 744
EcoT38I GRGCYC 4 cut(s) 136, 218, 234, 779
ErhI CCWWGG 1 cut(s) 744
FalI AAGNNNNNCTT 4 cut(s) 345, 377, 1034, 1066
FaqI GGGAC 1 cut(s) 517
FauNDI CATATG 1 cut(s) 1080
FbaI TGATCA 4 cut(s) 406, 723, 825, 856
FblI GTMKAC 2 cut(s) 582, 1178
Fnu4HI GCNGC 4 cut(s) 202, 339, 416, 620
FokI GGATG 6 cut(s) 540, 602, 675, 977, 1216, 1248
FriOI GRGCYC 4 cut(s) 136, 218, 234, 779
Fsp4HI GCNGC 4 cut(s) 202, 339, 416, 620
GlaI GCGC 1 cut(s) 305
GluI GCNGC 4 cut(s) 202, 339, 416, 620
GsaI CCCAGC 1 cut(s) 159
GsuI CTGGAG 1 cut(s) 205
HaeIII GGCC 6 cut(s) 65, 204, 518, 563, 777, 1120
HapII CCGG 1 cut(s) 206
HhaI GCGC 1 cut(s) 306
Hin6I GCGC 1 cut(s) 304
HinP1I GCGC 1 cut(s) 304
HincII GTYRAC 1 cut(s) 583
HindII GTYRAC 1 cut(s) 583
HindIII AAGCTT 1 cut(s) 320
HinfI GANTC 2 cut(s) 253, 584
HpaII CCGG 1 cut(s) 206
HphI GGTGA 5 cut(s) 27, 133, 172, 317, 416
Hpy166II GTNNAC 2 cut(s) 583, 1179
Hpy188I TCNGA 7 cut(s) 13, 220, 229, 536, 589, 853, 870
Hpy188III TCNNGA 4 cut(s) 430, 557, 727, 1265
Hpy8I GTNNAC 2 cut(s) 583, 1179
Hpy99I CGWCG 1 cut(s) 248
HpyAV CCTTC 7 cut(s) 78, 154, 280, 339, 886, 1023, 1204
HpyCH4III ACNGT 1 cut(s) 449
HpyCH4IV ACGT 1 cut(s) 384
HpyF10VI GCNNNNNNNGC 2 cut(s) 113, 421
HpyF3I CTNAG 9 cut(s) 39, 228, 257, 375, 419, 533, 558, 1022, 1241
HpySE526I ACGT 1 cut(s) 384
HspAI GCGC 1 cut(s) 304
Ksp22I TGATCA 4 cut(s) 406, 723, 825, 856
Kzo9I GATC 8 cut(s) 47, 406, 570, 640, 723, 825, 856, 978
LguI GCTCTTC 1 cut(s) 683
LmnI GCTCC 2 cut(s) 186, 221
Lsp1109I GCAGC 3 cut(s) 325, 427, 606
LweI GCATC 5 cut(s) 116, 174, 580, 1194, 1270
MaeII ACGT 1 cut(s) 384
MaeIII GTNAC 2 cut(s) 364, 1126
MalI GATC 8 cut(s) 49, 408, 572, 642, 725, 827, 858, 980
MboI GATC 8 cut(s) 47, 406, 570, 640, 723, 825, 856, 978
MboII GAAGA 5 cut(s) 287, 350, 359, 700, 1054
MflI RGATCY 1 cut(s) 570
MhlI GDGCHC 6 cut(s) 136, 191, 218, 234, 779, 1167
MluCI AATT 4 cut(s) 14, 75, 453, 1219
MlyI GAGTC 1 cut(s) 578
MmeI TCCRAC 3 cut(s) 79, 243, 1175
MroXI GAANNNNTTC 1 cut(s) 354
MseI TTAA 1 cut(s) 1275
MslI CAYNNNNRTG 2 cut(s) 462, 605
MspA1I CMGCKG 1 cut(s) 418
MspI CCGG 1 cut(s) 206
MspR9I CCNGG 3 cut(s) 184, 206, 846
Mva1269I GAATGC 1 cut(s) 266
MvaI CCWGG 2 cut(s) 184, 846
MwoI GCNNNNNNNGC 2 cut(s) 113, 421
NciI CCSGG 1 cut(s) 206
NcoI CCATGG 1 cut(s) 744
NdeI CATATG 1 cut(s) 1080
NdeII GATC 8 cut(s) 47, 406, 570, 640, 723, 825, 856, 978
NlaIV GGNNCC 3 cut(s) 66, 217, 777
NmeAIII GCCGAG 1 cut(s) 589
NmuCI GTSAC 1 cut(s) 1126
NspI RCATGY 1 cut(s) 1037
PaeI GCATGC 1 cut(s) 1037
PciSI GCTCTTC 1 cut(s) 683
PctI GAATGC 1 cut(s) 266
PdmI GAANNNNTTC 1 cut(s) 354
PfeI GAWTC 1 cut(s) 253
PkrI GCNGC 4 cut(s) 203, 340, 417, 621
PleI GAGTC 1 cut(s) 578
PpsI GAGTC 1 cut(s) 578
Psp6I CCWGG 2 cut(s) 182, 844
PspFI CCCAGC 1 cut(s) 155
PspGI CCWGG 2 cut(s) 182, 844
PspN4I GGNNCC 3 cut(s) 66, 217, 777
PspOMI GGGCCC 1 cut(s) 775
PspPI GGNCC 8 cut(s) 64, 203, 516, 741, 765, 775, 776, 1119
PstNI CAGNNNCTG 1 cut(s) 732
PsuI RGATCY 1 cut(s) 570
PvuII CAGCTG 1 cut(s) 418
RsaI GTAC 4 cut(s) 635, 932, 947, 992
RsaNI GTAC 4 cut(s) 634, 931, 946, 991
RseI CAYNNNNRTG 2 cut(s) 462, 605
SalI GTCGAC 1 cut(s) 581
SapI GCTCTTC 1 cut(s) 683
SaqAI TTAA 1 cut(s) 1275
SatI GCNGC 4 cut(s) 202, 339, 416, 620
Sau3AI GATC 8 cut(s) 47, 406, 570, 640, 723, 825, 856, 978
Sau96I GGNCC 8 cut(s) 64, 203, 516, 741, 765, 775, 776, 1119
SchI GAGTC 1 cut(s) 578
ScrFI CCNGG 3 cut(s) 184, 206, 846
SduI GDGCHC 6 cut(s) 136, 191, 218, 234, 779, 1167
SfaNI GCATC 5 cut(s) 116, 174, 580, 1194, 1270
SfcI CTRYAG 1 cut(s) 448
SinI GGWCC 2 cut(s) 741, 765
SmiMI CAYNNNNRTG 2 cut(s) 462, 605
SmlI CTYRAG 1 cut(s) 317
SmoI CTYRAG 1 cut(s) 317
SphI GCATGC 1 cut(s) 1037
Sse9I AATT 4 cut(s) 14, 75, 453, 1219
SsiI CCGC 2 cut(s) 201, 905
SspI AATATT 1 cut(s) 471
StyD4I CCNGG 3 cut(s) 182, 204, 844
StyI CCWWGG 1 cut(s) 744
TaaI ACNGT 1 cut(s) 449
TaiI ACGT 1 cut(s) 387
TaqI TCGA 2 cut(s) 168, 582
TasI AATT 4 cut(s) 14, 75, 453, 1219
TatI WGTACW 1 cut(s) 930
TauI GCSGC 1 cut(s) 204
TfiI GAWTC 1 cut(s) 253
Tru1I TTAA 1 cut(s) 1275
Tru9I TTAA 1 cut(s) 1275
TscAI CASTG 3 cut(s) 743, 1144, 1162
TseFI GTSAC 1 cut(s) 1126
TseI GCWGC 3 cut(s) 338, 415, 619
Tsp45I GTSAC 1 cut(s) 1126
TspDTI ATGAA 6 cut(s) 136, 299, 446, 480, 810, 1097
TspRI CASTG 3 cut(s) 743, 1144, 1162
VpaK11BI GGWCC 2 cut(s) 741, 765
XapI RAATTY 3 cut(s) 14, 453, 1219
XceI RCATGY 1 cut(s) 1037
XcmI CCANNNNNNNNNTGG 3 cut(s) 288, 503, 751
XmiI GTMKAC 2 cut(s) 582, 1178
XmnI GAANNNNTTC 1 cut(s) 354
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.