Prupe.6G219100_v2.0.a1

Galactomannan galactosyltransferase

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp06
Physical Location & Seq
Reverse (-)
22531635 .. 22532888
1254 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.6G219100.1

Sequence Viewer

Length: 1254 bp
ATGGCGAAATCGACCCATCAAACAAAACCCTGTGCAGACGGGTTTTGTTTTCTCGCTGGCCTCTTCTTCGGCCTTTTTTGTTTCTGGTCCCTAACCCTTTACCATTATAAACCCCATTTTGGCTTCATCCCTTTTTCTGCAAAAGCCTCAGATTACGGGGCCGAGGCTCCGATTCTCCATTCCGACCCACCCCATGAAACCTTCTACGACGACCCGGAACTGAGCTATTTCATAGAGAAGCCGGTCAATAACTGGGACCAGAAGAGGCACGTTTGGCTAGACCTTCACCCGTCATTCACCGCCGGGTCACGAGATCGGGTCCTCCTCGTCACCGGATCGCAGCCGTCCGTTTGTAAGAACCCGATTGGCGACCATCTCCTTCTGAGGTTCTTCAAGAACAAGGTGGACTATTGTCGTCTCCATGGCCACGACATTTTCTACAACGACGCATACTTGCATCCCAAGATGGACTCTTATTGGGCCAAGCTACCTATAATTCGGGCCGCGATGCTGGCCCACCCGGAAGCTGAATGGATCTGGTGGATGGACTCCGACGCCGTGTTCACCGACATGGAGTTTAAGGTTCCGCTGGGCCGGTACAAAGACCACAATCTTGTGGTCCATGGTTGGCCCAATATGGTTTACGAGGAGAAGAACAAAAGTTGGACCGGGCTTAACGCCGGCGTACTGTTAATCCGAAACTGTCAATGGTCCATGGATTTGATTGATGTATGGGTCTCGATGGGCCCATTGAGTCCGGATTTTGAAAGGTGGGGCCAGATTTTAACATCGGTATTTAAAGACAAGTTATTCTCGGTCTCGGACGATCAATCGTCTCTGATTTATTTACTTTTTACGAATAAAGAGAAATGGGGGGACAAGACTTATTTAGAAGGAGAGTATAATTTAGAAGGTTATTGGTTGGCTTTAGTTGGGAAATATGATACTTTGGCAGAGAGTTATATTAAGATGGAGCGAAACGAGGGCGTTTTGAGGAGGAGACATGCAGAGAAAGTAAATGACTGGTATGCTGCGGAGAGAGAAAAATATCTCCAGGGGCATGAGAGGAGACCTTTCGTGACGCATTTTACAGGTTGTCAACCTTGTAGTGGAGAGCACAATCCACAATATTCGGCCGATTCATGTTGGAATGAGATGAAGAGGGCTTTGAATTACGCGGATAATCAAGTGCTTAAGAACTATGGTTTTGTGCATCCGGAATTGAGTTCCTCAGAAGTTTCTGTTGTAATCTAA

Protein Analysis

418

Amino Acids

48.59

Weight (kDa)

6.01

Isoelectric Point (pI)

35.72

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 108
AccII CGCG 2 cut(s) 506, 1178
AccIII TCCGGA 2 cut(s) 757, 1216
AciI CCGC 5 cut(s) 300, 504, 587, 1034, 1178
AclWI GGATC 2 cut(s) 343, 542
AcoI YGGCCR 2 cut(s) 424, 1134
AcyI GRCGYC 1 cut(s) 555
AfaI GTAC 2 cut(s) 599, 687
AfiI CCNNNNNNNGG 2 cut(s) 119, 1109
AflII CTTAAG 1 cut(s) 1193
AgsI TTSAA 3 cut(s) 394, 767, 1171
AjnI CCWGG 1 cut(s) 1053
AluBI AGCT 3 cut(s) 225, 487, 527
AluI AGCT 3 cut(s) 225, 487, 527
Alw21I GWGCWC 1 cut(s) 1119
Alw26I GTCTC 6 cut(s) 422, 742, 823, 840, 994, 1063
AlwI GGATC 2 cut(s) 343, 542
Aor13HI TCCGGA 2 cut(s) 757, 1216
ApaI GGGCCC 1 cut(s) 749
ApeKI GCWGC 2 cut(s) 340, 1031
AsuC2I CCSGG 4 cut(s) 215, 304, 521, 670
AsuHPI GGTGA 4 cut(s) 278, 289, 322, 556
AvaII GGWCC 6 cut(s) 87, 256, 319, 619, 666, 711
BaeGI GKGCMC 1 cut(s) 749
BalI TGGCCA 1 cut(s) 426
BanII GRGCYC 1 cut(s) 749
BauI CACGAG 1 cut(s) 309
Bbv12I GWGCWC 1 cut(s) 1119
BbvI GCAGC 2 cut(s) 352, 1018
BccI CCATC 6 cut(s) 24, 381, 460, 538, 736, 964
BceAI ACGGC 2 cut(s) 328, 542
BciT130I CCWGG 1 cut(s) 1055
BcnI CCSGG 4 cut(s) 215, 304, 521, 670
BcoDI GTCTC 6 cut(s) 422, 742, 823, 840, 994, 1063
BfaI CTAG 1 cut(s) 278
BfrI CTTAAG 1 cut(s) 1193
BisI GCNGC 3 cut(s) 341, 504, 1032
BlsI GCNGC 3 cut(s) 342, 505, 1033
Bme1390I CCNGG 5 cut(s) 215, 304, 521, 670, 1055
Bme18I GGWCC 6 cut(s) 87, 256, 319, 619, 666, 711
BmiI GGNNCC 8 cut(s) 89, 160, 168, 257, 320, 585, 747, 776
BmrFI CCNGG 5 cut(s) 215, 304, 521, 670, 1055
BmrI ACTGGG 1 cut(s) 262
BmsI GCATC 3 cut(s) 466, 498, 1222
BmuI ACTGGG 1 cut(s) 262
BoxI GACNNNNGTC 1 cut(s) 411
BpmI CTGGAG 1 cut(s) 1037
BpuMI CCSGG 4 cut(s) 215, 304, 521, 670
BsaHI GRCGYC 1 cut(s) 555
BsaI GGTCTC 3 cut(s) 742, 823, 1063
BsaJI CCNNGG 5 cut(s) 162, 421, 622, 714, 1054
BsaWI WCCGGW 3 cut(s) 332, 757, 1216
Bsc4I CCNNNNNNNGG 2 cut(s) 119, 1109
Bse118I RCCGGY 3 cut(s) 241, 594, 680
Bse1I ACTGG 2 cut(s) 257, 1028
BseAI TCCGGA 2 cut(s) 757, 1216
BseBI CCWGG 1 cut(s) 1055
BseDI CCNNGG 5 cut(s) 162, 421, 622, 714, 1054
BseGI GGATG 4 cut(s) 126, 457, 549, 1213
BseLI CCNNNNNNNGG 2 cut(s) 119, 1109
BseMII CTCAG 4 cut(s) 162, 212, 374, 1245
BseNI ACTGG 2 cut(s) 257, 1028
BseRI GAGGAG 5 cut(s) 314, 662, 1009, 1012, 1081
BseSI GKGCMC 1 cut(s) 749
BseX3I CGGCCG 1 cut(s) 1134
BseXI GCAGC 2 cut(s) 352, 1018
BseYI CCCAGC 1 cut(s) 589
BsgI GTGCAG 1 cut(s) 54
Bsh1236I CGCG 2 cut(s) 506, 1178
Bsh1285I CGRYCG 1 cut(s) 1137
BsiEI CGRYCG 1 cut(s) 1137
BsiHKAI GWGCWC 1 cut(s) 1119
BslFI GGGAC 3 cut(s) 73, 269, 890
BslI CCNNNNNNNGG 2 cut(s) 119, 1109
BsmAI GTCTC 6 cut(s) 422, 742, 823, 840, 994, 1063
BsmBI CGTCTC 2 cut(s) 422, 840
BsmFI GGGAC 3 cut(s) 73, 269, 890
Bso31I GGTCTC 3 cut(s) 742, 823, 1063
Bsp120I GGGCCC 1 cut(s) 745
Bsp1286I GDGCHC 2 cut(s) 749, 1119
Bsp13I TCCGGA 2 cut(s) 757, 1216
Bsp143I GATC 4 cut(s) 313, 335, 534, 826
Bsp19I CCATGG 3 cut(s) 421, 622, 714
BspACI CCGC 5 cut(s) 300, 504, 587, 1034, 1178
BspCNI CTCAG 4 cut(s) 161, 213, 375, 1244
BspEI TCCGGA 2 cut(s) 757, 1216
BspFNI CGCG 2 cut(s) 506, 1178
BspLI GGNNCC 8 cut(s) 89, 160, 168, 257, 320, 585, 747, 776
BspPI GGATC 2 cut(s) 343, 542
BspTI CTTAAG 1 cut(s) 1193
BspTNI GGTCTC 3 cut(s) 742, 823, 1063
BsrFI RCCGGY 3 cut(s) 241, 594, 680
BsrI ACTGG 2 cut(s) 257, 1028
BssAI RCCGGY 3 cut(s) 241, 594, 680
BssECI CCNNGG 5 cut(s) 162, 421, 622, 714, 1054
BssMI GATC 4 cut(s) 313, 335, 534, 826
BssNI GRCGYC 1 cut(s) 555
BssSI CACGAG 1 cut(s) 309
BssT1I CCWWGG 3 cut(s) 421, 622, 714
Bst2BI CACGAG 1 cut(s) 309
Bst2UI CCWGG 1 cut(s) 1055
Bst4CI ACNGT 2 cut(s) 690, 704
Bst6I CTCTTC 3 cut(s) 68, 257, 1154
BstACI GRCGYC 1 cut(s) 555
BstAFI CTTAAG 1 cut(s) 1193
BstC8I GCNNGC 3 cut(s) 58, 513, 682
BstDEI CTNAG 4 cut(s) 148, 221, 383, 1231
BstDSI CCRYGG 3 cut(s) 421, 622, 714
BstF5I GGATG 4 cut(s) 126, 457, 549, 1213
BstFNI CGCG 2 cut(s) 506, 1178
BstKTI GATC 4 cut(s) 316, 338, 537, 829
BstMAI GTCTC 6 cut(s) 422, 742, 823, 840, 994, 1063
BstMBI GATC 4 cut(s) 313, 335, 534, 826
BstMCI CGRYCG 1 cut(s) 1137
BstMWI GCNNNNNNNGC 2 cut(s) 274, 512
BstNI CCWGG 1 cut(s) 1055
BstNSI RCATGY 1 cut(s) 1007
BstPAI GACNNNNGTC 1 cut(s) 411
BstSCI CCNGG 5 cut(s) 213, 302, 519, 668, 1053
BstSLI GKGCMC 1 cut(s) 749
BstUI CGCG 2 cut(s) 506, 1178
BstV1I GCAGC 2 cut(s) 352, 1018
BstX2I RGATCY 1 cut(s) 534
BstYI RGATCY 1 cut(s) 534
BstZI CGGCCG 1 cut(s) 1134
BtgI CCRYGG 3 cut(s) 421, 622, 714
BtgZI GCGATG 1 cut(s) 521
BtsCI GGATG 4 cut(s) 126, 457, 549, 1213
Cac8I GCNNGC 3 cut(s) 58, 513, 682
Cfr10I RCCGGY 3 cut(s) 241, 594, 680
CseI GACGC 3 cut(s) 455, 563, 1090
Csp6I GTAC 2 cut(s) 598, 686
CviAII CATG 8 cut(s) 194, 422, 571, 623, 715, 1004, 1061, 1143
CviQI GTAC 2 cut(s) 598, 686
DdeI CTNAG 4 cut(s) 148, 221, 383, 1231
DpnI GATC 4 cut(s) 315, 337, 536, 828
DpnII GATC 4 cut(s) 313, 335, 534, 826
DraI TTTAAA 1 cut(s) 799
EaeI YGGCCR 2 cut(s) 424, 1134
EagI CGGCCG 1 cut(s) 1134
Eam1104I CTCTTC 3 cut(s) 68, 257, 1154
EarI CTCTTC 3 cut(s) 68, 257, 1154
EclXI CGGCCG 1 cut(s) 1134
Eco130I CCWWGG 3 cut(s) 421, 622, 714
Eco24I GRGCYC 1 cut(s) 749
Eco31I GGTCTC 3 cut(s) 742, 823, 1063
Eco47I GGWCC 6 cut(s) 87, 256, 319, 619, 666, 711
Eco52I CGGCCG 1 cut(s) 1134
EcoO109I RGGNCCY 1 cut(s) 319
EcoRII CCWGG 1 cut(s) 1053
EcoT14I CCWWGG 3 cut(s) 421, 622, 714
EcoT38I GRGCYC 1 cut(s) 749
ErhI CCWWGG 3 cut(s) 421, 622, 714
Esp3I CGTCTC 2 cut(s) 422, 840
FaeI CATG 8 cut(s) 197, 425, 574, 626, 718, 1007, 1064, 1146
FaqI GGGAC 3 cut(s) 73, 269, 890
FatI CATG 8 cut(s) 193, 421, 570, 622, 714, 1003, 1060, 1142
Fnu4HI GCNGC 3 cut(s) 341, 504, 1032
FokI GGATG 4 cut(s) 113, 444, 556, 1200
FriOI GRGCYC 1 cut(s) 749
Fsp4HI GCNGC 3 cut(s) 341, 504, 1032
FspBI CTAG 1 cut(s) 278
GluI GCNGC 3 cut(s) 341, 504, 1032
GsaI CCCAGC 1 cut(s) 593
GsuI CTGGAG 1 cut(s) 1037
HgaI GACGC 3 cut(s) 455, 563, 1090
Hin1I GRCGYC 1 cut(s) 555
Hin1II CATG 8 cut(s) 197, 425, 574, 626, 718, 1007, 1064, 1146
HincII GTYRAC 1 cut(s) 1100
HindII GTYRAC 1 cut(s) 1100
HinfI GANTC 5 cut(s) 172, 470, 548, 754, 1139
HphI GGTGA 4 cut(s) 278, 289, 322, 556
Hpy166II GTNNAC 4 cut(s) 406, 564, 643, 1100
Hpy188I TCNGA 9 cut(s) 151, 171, 184, 384, 553, 698, 823, 840, 1234
Hpy188III TCNNGA 6 cut(s) 309, 394, 739, 758, 1078, 1217
Hpy8I GTNNAC 4 cut(s) 406, 564, 643, 1100
Hpy99I CGWCG 3 cut(s) 212, 449, 557
HpyAV CCTTC 5 cut(s) 211, 293, 389, 887, 905
HpyCH4III ACNGT 2 cut(s) 690, 704
HpyCH4IV ACGT 1 cut(s) 270
HpyCH4V TGCA 5 cut(s) 35, 140, 457, 1007, 1213
HpyF10VI GCNNNNNNNGC 2 cut(s) 274, 512
HpyF3I CTNAG 4 cut(s) 148, 221, 383, 1231
HpySE526I ACGT 1 cut(s) 270
Hsp92I GRCGYC 1 cut(s) 555
Hsp92II CATG 8 cut(s) 197, 425, 574, 626, 718, 1007, 1064, 1146
Kpn2I TCCGGA 2 cut(s) 757, 1216
KroI GCCGGC 1 cut(s) 680
KroNI GCCGGC 1 cut(s) 682
Kzo9I GATC 4 cut(s) 313, 335, 534, 826
LmnI GCTCC 2 cut(s) 172, 973
Lsp1109I GCAGC 2 cut(s) 352, 1018
LweI GCATC 3 cut(s) 466, 498, 1222
MaeI CTAG 1 cut(s) 278
MaeII ACGT 1 cut(s) 270
MaeIII GTNAC 3 cut(s) 306, 328, 1078
MalI GATC 4 cut(s) 315, 337, 536, 828
MboI GATC 4 cut(s) 313, 335, 534, 826
MboII GAAGA 6 cut(s) 55, 58, 274, 382, 664, 1171
MflI RGATCY 1 cut(s) 534
MhlI GDGCHC 2 cut(s) 749, 1119
MlsI TGGCCA 1 cut(s) 426
MluCI AATT 4 cut(s) 495, 904, 1171, 1220
MluNI TGGCCA 1 cut(s) 426
MlyI GAGTC 3 cut(s) 464, 542, 763
MmeI TCCRAC 4 cut(s) 207, 576, 644, 1127
Mox20I TGGCCA 1 cut(s) 426
MreI CGCCGGCG 1 cut(s) 680
MroI TCCGGA 2 cut(s) 757, 1216
MroNI GCCGGC 1 cut(s) 680
MscI TGGCCA 1 cut(s) 426
MseI TTAA 7 cut(s) 579, 675, 692, 785, 798, 966, 1194
MslI CAYNNNNRTG 1 cut(s) 569
Msp20I TGGCCA 1 cut(s) 426
MspA1I CMGCKG 1 cut(s) 589
MspCI CTTAAG 1 cut(s) 1193
MspR9I CCNGG 5 cut(s) 215, 304, 521, 670, 1055
MvaI CCWGG 1 cut(s) 1055
MvnI CGCG 2 cut(s) 506, 1178
MwoI GCNNNNNNNGC 2 cut(s) 274, 512
NaeI GCCGGC 1 cut(s) 682
NciI CCSGG 4 cut(s) 215, 304, 521, 670
NcoI CCATGG 3 cut(s) 421, 622, 714
NdeII GATC 4 cut(s) 313, 335, 534, 826
NgoMIV GCCGGC 1 cut(s) 680
NlaIII CATG 8 cut(s) 197, 425, 574, 626, 718, 1007, 1064, 1146
NlaIV GGNNCC 8 cut(s) 89, 160, 168, 257, 320, 585, 747, 776
NmeAIII GCCGAG 1 cut(s) 187
NmuCI GTSAC 3 cut(s) 306, 328, 1078
NspI RCATGY 1 cut(s) 1007
PdiI GCCGGC 1 cut(s) 682
PfeI GAWTC 2 cut(s) 172, 1139
PkrI GCNGC 3 cut(s) 342, 505, 1033
PleI GAGTC 3 cut(s) 464, 542, 762
PpsI GAGTC 3 cut(s) 464, 542, 762
PpuMI RGGWCCY 1 cut(s) 319
PshAI GACNNNNGTC 1 cut(s) 411
PsiI TTATAA 1 cut(s) 108
Psp5II RGGWCCY 1 cut(s) 319
Psp6I CCWGG 1 cut(s) 1053
PspFI CCCAGC 1 cut(s) 589
PspGI CCWGG 1 cut(s) 1053
PspN4I GGNNCC 8 cut(s) 89, 160, 168, 257, 320, 585, 747, 776
PspOMI GGGCCC 1 cut(s) 745
PspPPI RGGWCCY 1 cut(s) 319
PsuI RGATCY 1 cut(s) 534
RsaI GTAC 2 cut(s) 599, 687
RsaNI GTAC 2 cut(s) 598, 686
RseI CAYNNNNRTG 1 cut(s) 569
SaqAI TTAA 7 cut(s) 579, 675, 692, 785, 798, 966, 1194
SatI GCNGC 3 cut(s) 341, 504, 1032
Sau3AI GATC 4 cut(s) 313, 335, 534, 826
SchI GAGTC 3 cut(s) 464, 542, 763
ScrFI CCNGG 5 cut(s) 215, 304, 521, 670, 1055
SduI GDGCHC 2 cut(s) 749, 1119
SfaNI GCATC 3 cut(s) 466, 498, 1222
SgrAI CRCCGGYG 1 cut(s) 680
SinI GGWCC 6 cut(s) 87, 256, 319, 619, 666, 711
SmiMI CAYNNNNRTG 1 cut(s) 569
SmlI CTYRAG 1 cut(s) 1193
SmoI CTYRAG 1 cut(s) 1193
Sse9I AATT 4 cut(s) 495, 904, 1171, 1220
SsiI CCGC 5 cut(s) 300, 504, 587, 1034, 1178
SspI AATATT 1 cut(s) 1130
SspMI CTAG 1 cut(s) 278
StyD4I CCNGG 5 cut(s) 213, 302, 519, 668, 1053
StyI CCWWGG 3 cut(s) 421, 622, 714
TaaI ACNGT 2 cut(s) 690, 704
TaiI ACGT 1 cut(s) 273
TaqI TCGA 2 cut(s) 11, 740
TaqII GACCGA 1 cut(s) 805
TasI AATT 4 cut(s) 495, 904, 1171, 1220
TauI GCSGC 1 cut(s) 506
TfiI GAWTC 2 cut(s) 172, 1139
Tru1I TTAA 7 cut(s) 579, 675, 692, 785, 798, 966, 1194
Tru9I TTAA 7 cut(s) 579, 675, 692, 785, 798, 966, 1194
TseFI GTSAC 3 cut(s) 306, 328, 1078
TseI GCWGC 2 cut(s) 340, 1031
Tsp45I GTSAC 3 cut(s) 306, 328, 1078
TspDTI ATGAA 5 cut(s) 115, 210, 220, 1131, 1172
TspGWI ACGGA 1 cut(s) 337
Vha464I CTTAAG 1 cut(s) 1193
VpaK11BI GGWCC 6 cut(s) 87, 256, 319, 619, 666, 711
XceI RCATGY 1 cut(s) 1007
XspI CTAG 1 cut(s) 278
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.