Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0002372.1

Orthogroup ID

OG0001277

Physical Location & Seq

Genomic Coordinates Forward (+)

107487 .. 109779

Gene Structure 2293 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0002372.1_g000021.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1482 bp

atggtctcccccgagccctcctctcacccccaaccaatgtcgaagccctctttacgagccaaggcctcctcatggctcaccgacggccttctcttcctcggcggcgcatttctcgctcttttactcctcatcactatatggtccttcatacaccccaactccacttccgcccccaatttcgggcgtaccgtcactccgccccggtccaattcggttcgtcattccgacccgggtccgaatctacagtccgacccgcccgaccggaccttctacgacgacccggagctgacctactctattggcaacccggttaaaaactgggacgagaagcggagccagtggctactgcatcatccttcattcggcgccggagcagctgagcggattctcatggtgacgggatcgcagccgtccgcgtgtaagaatcctatcggcgatcatttgctgctgagattcttcaagaacaaagtggactactgcagaatacacggccacgatttgttctacaacaacgcgttccttcacccggaaatgaagagctactgggccaagattccggtcatccgtgccgccatggtggcccacccggaggccgagtggatctggtgggtcgactcggacgcgttgttcaccgacatggagttcaaattaccgttagagaagtacaggagccacaacctcatcgttcacggctgggcccacttgattctggacacccacagctggacggggttaaacgccggcgtgtttctgatccggaactgccagtggtccatggacttcctcgaggcctgggccggaatgggcccgcagacgccggactacgagaagtggggggagacgcttcgggcgacgtttaaggacaaggcgttcccggagtcggacgatcagacgggcctggcgtacctgatttacaaagagaacgagaaatgggcggacaggatttacttagagagcgattattatttcgaagggtattgggccgaaatagtcggcaccctggacaacatcaccgagaagtacacggagatagagaaacggcaaggggacgaggacgtggcgcggctgagaaggcgacacgcggagaaagtgagcgagcaatacggtgcgtttagggagaagtttttgaaggacgcggggtctgggtacggggtgggcagctggaggagaccgttcgtcacgcatttcaccggatgccagccctgcagtggggaccacaatcagatgtattccggggagtcttgctgggacggcatgcaaaaggcgttgaacttcgccgataatcaggtgcttcgtaaatatgggttcgtgcacccgagcgcagtggatccgtcactccagccgttgccgtttaactatccgaaaggaaaaccaggtcctcagggtccaagttacaacatgcatgaggcatctgacgattctgaaccgctattgctttgggtagcacaaggacgcttatggcaatatgcagagggatattga

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0000271 GO:0003006 GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005768 GO:0005794 GO:0005802 GO:0005975 GO:0005976 GO:0006080 GO:0007275 GO:0008150 GO:0008152 GO:0008378 GO:0009058 GO:0009059 GO:0009791 GO:0009987 GO:0010154 GO:0010191 GO:0010192 GO:0010214 GO:0010392 GO:0012505 GO:0016051 GO:0016740 GO:0016757 GO:0016758 GO:0022414 GO:0031410 GO:0031982 GO:0031984 GO:0032501 GO:0032502 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044237 GO:0044238 GO:0044249 GO:0044422 GO:0044424 GO:0044431 GO:0044444 GO:0044446 GO:0044464 GO:0048316 GO:0048608 GO:0048731 GO:0048856 GO:0051069 GO:0051070 GO:0061458 GO:0071704 GO:0097708 GO:0098791 GO:1901576

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Glyco_transf_34

Protein Analysis

493

Amino Acids

56.35

Weight (kDa)

5.95

Isoelectric Point (pI)

40.12

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0001277)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G22900 AT4G37690 AT4G38310
fragaria_vesca	FvH4_1g17940 FvH4_1g17941 FvH4_1g17941 FvH4_1g17941 FvH4_3g15850 FvH4_3g15870
malus_domestica	MD02G1188000.v1.1 MD02G1188100.v1.1 MD05G1219400.v1.1 MD10G1201500.v1.1 MD10G1201600.v1.1 MD10G1201700.v1.1 MD10G1201800.v1.1 MD15G1298900.v1.1
prunus_persica	Prupe.4G140500_v2.0.a1 Prupe.6G219000_v2.0.a1 Prupe.6G219100_v2.0.a1
pyrus_communis	pycom02g15280 pycom05g20080 pycom09g14400 pycom10g17250 pycom10g17260
rosa_chinensis	RchiOBHm_Chr2g0108371 RchiOBHm_Chr5g0026661
rosa_laevigata	RLG00000017664 RLG00000017665 RLG00000017961 RLG00000032944
rosa_multiflora	Rmu_co8428357.1_g000001 Rmu_sc0002372.1_g000017 Rmu_sc0002372.1_g000021 Rmu_sc0004490.1_g000008 Rmu_sc0009208.1_g000005
rosa_roxburghii	Rroxscaffold_1G00052800 Rroxscaffold_2G00135190 Rroxscaffold_2G00135200
rosa_rugosa	Rorug02G0152300 Rorug05G0094600
rosa_samantha	Rh2AG201400 Rh2AG201500 Rh2BG214200 Rh2BG214400 Rh2CG205700 Rh2DG208700 Rh2DG208800 Rh5AG188200 Rh5BG184500 Rh5CG204400 Rh5DG186800
rosa_wichuraiana	Rw2G016030 Rw2G016090 Rw5G017030

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AbsI	CCTCGAGG	1 cut(s)	785
AccB1I	GGYRCC	2 cut(s)	365, 995
AccBSI	CCGCTC	1 cut(s)	382
AccI	GTMKAC	1 cut(s)	612
AccII	CGCG	6 cut(s)	416, 515, 623, 1063, 1082, 1136
AccIII	TCCGGA	1 cut(s)	756
AclWI	GGATC	5 cut(s)	409, 608, 748, 1322, 1335
AcoI	YGGCCR	1 cut(s)	490
AcyI	GRCGYC	2 cut(s)	366, 815
AfaI	GTAC	5 cut(s)	187, 665, 905, 1022, 1148
AflIII	ACRYGT	2 cut(s)	513, 621
AgsI	TTSAA	4 cut(s)	460, 646, 1129, 1270
AhdI	GACNNNNNGTC	2 cut(s)	1138, 1175
AjiI	CACGTC	1 cut(s)	1057
AjnI	CCWGG	4 cut(s)	791, 897, 999, 1372
AloI	GAACNNNNNNTCC	4 cut(s)	611, 643, 854, 886
AluBI	AGCT	5 cut(s)	286, 377, 540, 723, 1161
AluI	AGCT	5 cut(s)	286, 377, 540, 723, 1161
Alw21I	GWGCWC	1 cut(s)	1314
Alw26I	GTCTC	3 cut(s)	10, 833, 1162
Alw44I	GTGCAC	1 cut(s)	1310
AlwI	GGATC	5 cut(s)	409, 608, 748, 1322, 1335
Ama87I	CYCGRG	4 cut(s)	11, 229, 785, 1315
Aor13HI	TCCGGA	1 cut(s)	756
ApaI	GGGCCC	2 cut(s)	700, 809
ApaLI	GTGCAC	1 cut(s)	1310
ApeKI	GCWGC	4 cut(s)	374, 406, 445, 1158
ArsI	GACNNNNNNTTYG	2 cut(s)	230, 262
AspLEI	GCGC	4 cut(s)	107, 368, 1063, 1322
AsuC2I	CCSGG	9 cut(s)	202, 230, 231, 281, 308, 527, 587, 875, 1234
AsuHPI	GGTGA	7 cut(s)	17, 70, 406, 515, 622, 1003, 1180
AsuII	TTCGAA	1 cut(s)	969
AvaI	CYCGRG	4 cut(s)	11, 229, 785, 1315
AvaII	GGWCC	8 cut(s)	141, 204, 233, 264, 771, 1213, 1376, 1385
AxyI	CCTNAGG	1 cut(s)	1380
BaeGI	GKGCMC	3 cut(s)	700, 809, 1314
BamHI	GGATCC	1 cut(s)	1327
BanI	GGYRCC	2 cut(s)	365, 995
BanII	GRGCYC	3 cut(s)	18, 700, 809
Bbv12I	GWGCWC	1 cut(s)	1314
BbvI	GCAGC	4 cut(s)	386, 418, 432, 1170
BceAI	ACGGC	8 cut(s)	100, 394, 505, 706, 1055, 1267, 1327, 1333
BciT130I	CCWGG	4 cut(s)	793, 899, 1001, 1374
BcnI	CCSGG	9 cut(s)	202, 230, 231, 281, 308, 527, 587, 875, 1234
BcoDI	GTCTC	3 cut(s)	10, 833, 1162
BfmI	CTRYAG	3 cut(s)	242, 478, 1204
BfoI	RGCGCY	1 cut(s)	369
BglI	GCCNNNNNGGC	1 cut(s)	578
BisI	GCNGC	7 cut(s)	103, 375, 407, 446, 570, 1064, 1159
BlpI	GCTNAGC	1 cut(s)	378
BlsI	GCNGC	7 cut(s)	104, 376, 408, 447, 571, 1065, 1160
Bme18I	GGWCC	8 cut(s)	141, 204, 233, 264, 771, 1213, 1376, 1385
BmeRI	GACNNNNNGTC	2 cut(s)	1138, 1175
BmeT110I	CYCGRG	4 cut(s)	11, 229, 785, 1315
BmgBI	CACGTC	1 cut(s)	1057
BmrI	ACTGGG	2 cut(s)	328, 553
BmsI	GCATC	3 cut(s)	358, 1184, 1418
BmuI	ACTGGG	2 cut(s)	328, 553
BoxI	GACNNNNGTC	1 cut(s)	231
BplI	GAGNNNNNCTC	1 cut(s)	37
BpmI	CTGGAG	2 cut(s)	1183, 1322
Bpu1102I	GCTNAGC	1 cut(s)	378
Bpu14I	TTCGAA	1 cut(s)	969
BpuMI	CCSGG	9 cut(s)	202, 230, 231, 281, 308, 527, 587, 875, 1234
BsaHI	GRCGYC	2 cut(s)	366, 815
BsaI	GGTCTC	2 cut(s)	10, 1162
BsaJI	CCNNGG	9 cut(s)	60, 97, 200, 229, 573, 774, 792, 999, 1233
BsaWI	WCCGGW	4 cut(s)	261, 556, 756, 1190
BsaXI	ACNNNNNCTCC	6 cut(s)	143, 173, 178, 208, 581, 611
Bse118I	RCCGGY	1 cut(s)	740
Bse1I	ACTGG	4 cut(s)	323, 337, 548, 766
Bse21I	CCTNAGG	1 cut(s)	1380
BseAI	TCCGGA	1 cut(s)	756
BseBI	CCWGG	4 cut(s)	793, 899, 1001, 1374
BseDI	CCNNGG	9 cut(s)	60, 97, 200, 229, 573, 774, 792, 999, 1233
BseGI	GGATG	3 cut(s)	352, 561, 1199
BseMII	CTCAG	4 cut(s)	369, 440, 1058, 1394
BseNI	ACTGG	4 cut(s)	323, 337, 548, 766
BseRI	GAGGAG	4 cut(s)	10, 58, 116, 1180
BseSI	GKGCMC	3 cut(s)	700, 809, 1314
BseXI	GCAGC	4 cut(s)	386, 418, 432, 1170
BseYI	CCCAGC	2 cut(s)	693, 1245
Bsh1236I	CGCG	6 cut(s)	416, 515, 623, 1063, 1082, 1136
Bsh1285I	CGRYCG	1 cut(s)	262
BshNI	GGYRCC	2 cut(s)	365, 995
BsiEI	CGRYCG	1 cut(s)	262
BsiHKAI	GWGCWC	1 cut(s)	1314
BsiHKCI	CYCGRG	4 cut(s)	11, 229, 785, 1315
BslFI	GGGAC	4 cut(s)	335, 1061, 1226, 1262
BsmAI	GTCTC	3 cut(s)	10, 833, 1162
BsmBI	CGTCTC	1 cut(s)	833
BsmFI	GGGAC	4 cut(s)	335, 1061, 1226, 1262
Bso31I	GGTCTC	2 cut(s)	10, 1162
BsoBI	CYCGRG	4 cut(s)	11, 229, 785, 1315
Bsp119I	TTCGAA	1 cut(s)	969
Bsp120I	GGGCCC	2 cut(s)	696, 805
Bsp1286I	GDGCHC	4 cut(s)	18, 700, 809, 1314
Bsp13I	TCCGGA	1 cut(s)	756
Bsp143I	GATC	6 cut(s)	401, 436, 600, 753, 886, 1327
Bsp1720I	GCTNAGC	1 cut(s)	378
Bsp19I	CCATGG	2 cut(s)	573, 774
BspCNI	CTCAG	4 cut(s)	370, 441, 1059, 1393
BspEI	TCCGGA	1 cut(s)	756
BspFNI	CGCG	6 cut(s)	416, 515, 623, 1063, 1082, 1136
BspMAI	CTGCAG	2 cut(s)	482, 1208
BspPI	GGATC	5 cut(s)	409, 608, 748, 1322, 1335
BspQI	GCTCTTC	1 cut(s)	530
BspT104I	TTCGAA	1 cut(s)	969
BspT107I	GGYRCC	2 cut(s)	365, 995
BspTNI	GGTCTC	2 cut(s)	10, 1162
BsrBI	CCGCTC	1 cut(s)	382
BsrFI	RCCGGY	1 cut(s)	740
BsrI	ACTGG	4 cut(s)	323, 337, 548, 766
BssAI	RCCGGY	1 cut(s)	740
BssECI	CCNNGG	9 cut(s)	60, 97, 200, 229, 573, 774, 792, 999, 1233
BssMI	GATC	6 cut(s)	401, 436, 600, 753, 886, 1327
BssNI	GRCGYC	2 cut(s)	366, 815
BssT1I	CCWWGG	3 cut(s)	60, 573, 774
Bst2UI	CCWGG	4 cut(s)	793, 899, 1001, 1374
Bst4CI	ACNGT	5 cut(s)	190, 246, 654, 1106, 1173
Bst6I	CTCTTC	2 cut(s)	98, 530
BstACI	GRCGYC	2 cut(s)	366, 815
BstBI	TTCGAA	1 cut(s)	969
BstC8I	GCNNGC	5 cut(s)	742, 809, 1097, 1199, 1256
BstDEI	CTNAG	5 cut(s)	378, 449, 949, 1067, 1380
BstDSI	CCRYGG	2 cut(s)	573, 774
BstF5I	GGATG	3 cut(s)	352, 561, 1199
BstFNI	CGCG	6 cut(s)	416, 515, 623, 1063, 1082, 1136
BstH2I	RGCGCY	1 cut(s)	369
BstHHI	GCGC	4 cut(s)	107, 368, 1063, 1322
BstKTI	GATC	6 cut(s)	404, 439, 603, 756, 889, 1330
BstMAI	GTCTC	3 cut(s)	10, 833, 1162
BstMBI	GATC	6 cut(s)	401, 436, 600, 753, 886, 1327
BstMCI	CGRYCG	1 cut(s)	262
BstMWI	GCNNNNNNNGC	6 cut(s)	113, 374, 578, 1072, 1203, 1251
BstNI	CCWGG	4 cut(s)	793, 899, 1001, 1374
BstNSI	RCATGY	2 cut(s)	1258, 1402
BstPAI	GACNNNNGTC	1 cut(s)	231
BstSFI	CTRYAG	3 cut(s)	242, 478, 1204
BstSLI	GKGCMC	3 cut(s)	700, 809, 1314
BstUI	CGCG	6 cut(s)	416, 515, 623, 1063, 1082, 1136
BstV1I	GCAGC	4 cut(s)	386, 418, 432, 1170
BstX2I	RGATCY	2 cut(s)	600, 1327
BstYI	RGATCY	2 cut(s)	600, 1327
Bsu36I	CCTNAGG	1 cut(s)	1380
BtgI	CCRYGG	2 cut(s)	573, 774
BtrI	CACGTC	1 cut(s)	1057
BtsCI	GGATG	3 cut(s)	352, 561, 1199
BtsI	GCAGTG	2 cut(s)	1213, 1329
BtsIMutI	CAGTG	4 cut(s)	344, 773, 1213, 1329
Cac8I	GCNNGC	5 cut(s)	742, 809, 1097, 1199, 1256
CfoI	GCGC	4 cut(s)	107, 368, 1063, 1322
Cfr10I	RCCGGY	1 cut(s)	740
Cfr9I	CCCGGG	1 cut(s)	229
CseI	GACGC	5 cut(s)	629, 823, 850, 1142, 1461
CsiI	ACCWGGT	1 cut(s)	1372
Csp6I	GTAC	5 cut(s)	186, 664, 904, 1021, 1147
CviAII	CATG	8 cut(s)	72, 391, 574, 637, 775, 1255, 1399, 1403
CviQI	GTAC	5 cut(s)	186, 664, 904, 1021, 1147
DdeI	CTNAG	5 cut(s)	378, 449, 949, 1067, 1380
DinI	GGCGCC	1 cut(s)	367
DpnI	GATC	6 cut(s)	403, 438, 602, 755, 888, 1329
DpnII	GATC	6 cut(s)	401, 436, 600, 753, 886, 1327
DriI	GACNNNNNGTC	2 cut(s)	1138, 1175
EaeI	YGGCCR	1 cut(s)	490
Eam1104I	CTCTTC	2 cut(s)	98, 530
Eam1105I	GACNNNNNGTC	2 cut(s)	1138, 1175
EarI	CTCTTC	2 cut(s)	98, 530
EciI	GGCGGA	3 cut(s)	157, 186, 950
Eco130I	CCWWGG	3 cut(s)	60, 573, 774
Eco147I	AGGCCT	2 cut(s)	65, 791
Eco24I	GRGCYC	3 cut(s)	18, 700, 809
Eco31I	GGTCTC	2 cut(s)	10, 1162
Eco47I	GGWCC	8 cut(s)	141, 204, 233, 264, 771, 1213, 1376, 1385
Eco81I	CCTNAGG	1 cut(s)	1380
Eco88I	CYCGRG	4 cut(s)	11, 229, 785, 1315
EcoO109I	RGGNCCY	1 cut(s)	1376
EcoRII	CCWGG	4 cut(s)	791, 897, 999, 1372
EcoT14I	CCWWGG	3 cut(s)	60, 573, 774
EcoT22I	ATGCAT	1 cut(s)	1404
EcoT38I	GRGCYC	3 cut(s)	18, 700, 809
EgeI	GGCGCC	1 cut(s)	367
EheI	GGCGCC	1 cut(s)	367
ErhI	CCWWGG	3 cut(s)	60, 573, 774
Esp3I	CGTCTC	1 cut(s)	833
FaeI	CATG	8 cut(s)	75, 394, 577, 640, 778, 1258, 1402, 1406
FaqI	GGGAC	4 cut(s)	335, 1061, 1226, 1262
FatI	CATG	8 cut(s)	71, 390, 573, 636, 774, 1254, 1398, 1402
FauI	CCCGC	3 cut(s)	261, 816, 1129
FblI	GTMKAC	1 cut(s)	612
Fnu4HI	GCNGC	7 cut(s)	103, 375, 407, 446, 570, 1064, 1159
FokI	GGATG	3 cut(s)	339, 548, 1206
FriOI	GRGCYC	3 cut(s)	18, 700, 809
Fsp4HI	GCNGC	7 cut(s)	103, 375, 407, 446, 570, 1064, 1159
GlaI	GCGC	4 cut(s)	106, 367, 1062, 1321
GluI	GCNGC	7 cut(s)	103, 375, 407, 446, 570, 1064, 1159
GsaI	CCCAGC	2 cut(s)	697, 1249
GsuI	CTGGAG	2 cut(s)	1183, 1322
HaeII	RGCGCY	1 cut(s)	369
HgaI	GACGC	5 cut(s)	629, 823, 850, 1142, 1461
HhaI	GCGC	4 cut(s)	107, 368, 1063, 1322
Hin1I	GRCGYC	2 cut(s)	366, 815
Hin1II	CATG	8 cut(s)	75, 394, 577, 640, 778, 1258, 1402, 1406
Hin6I	GCGC	4 cut(s)	105, 366, 1061, 1320
HinP1I	GCGC	4 cut(s)	105, 366, 1061, 1320
HincII	GTYRAC	1 cut(s)	613
HindII	GTYRAC	1 cut(s)	613
HphI	GGTGA	7 cut(s)	17, 70, 406, 515, 622, 1003, 1180
Hpy166II	GTNNAC	6 cut(s)	472, 613, 630, 688, 1023, 1312
Hpy188III	TCNNGA	3 cut(s)	460, 710, 757
Hpy8I	GTNNAC	6 cut(s)	472, 613, 630, 688, 1023, 1312
Hpy99I	CGWCG	3 cut(s)	86, 278, 856
HpyAV	CCTTC	8 cut(s)	98, 154, 277, 366, 530, 965, 1065, 1123
HpyCH4III	ACNGT	5 cut(s)	190, 246, 654, 1106, 1173
HpyCH4IV	ACGT	2 cut(s)	854, 1056
HpyCH4V	TGCA	7 cut(s)	349, 480, 1206, 1258, 1312, 1402, 1469
HpyF10VI	GCNNNNNNNGC	6 cut(s)	113, 374, 578, 1072, 1203, 1251
HpyF3I	CTNAG	5 cut(s)	378, 449, 949, 1067, 1380
HpySE526I	ACGT	2 cut(s)	854, 1056
Hsp92I	GRCGYC	2 cut(s)	366, 815
Hsp92II	CATG	8 cut(s)	75, 394, 577, 640, 778, 1258, 1402, 1406
HspAI	GCGC	4 cut(s)	105, 366, 1061, 1320
KasI	GGCGCC	1 cut(s)	365
Kpn2I	TCCGGA	1 cut(s)	756
KroI	GCCGGC	1 cut(s)	740
KroNI	GCCGGC	1 cut(s)	742
Kzo9I	GATC	6 cut(s)	401, 436, 600, 753, 886, 1327
LguI	GCTCTTC	1 cut(s)	530
LmnI	GCTCC	4 cut(s)	283, 333, 371, 669
Lsp1109I	GCAGC	4 cut(s)	386, 418, 432, 1170
LweI	GCATC	3 cut(s)	358, 1184, 1418
MabI	ACCWGGT	1 cut(s)	1372
MaeII	ACGT	2 cut(s)	854, 1056
MaeIII	GTNAC	5 cut(s)	190, 394, 1177, 1332, 1391
MalI	GATC	6 cut(s)	403, 438, 602, 755, 888, 1329
MbiI	CCGCTC	1 cut(s)	382
MboI	GATC	6 cut(s)	401, 436, 600, 753, 886, 1327
MboII	GAAGA	3 cut(s)	85, 448, 547
MflI	RGATCY	2 cut(s)	600, 1327
MhlI	GDGCHC	4 cut(s)	18, 700, 809, 1314
MluCI	AATT	3 cut(s)	175, 208, 647
MluI	ACGCGT	2 cut(s)	513, 621
Mly113I	GGCGCC	1 cut(s)	366
MlyI	GAGTC	3 cut(s)	608, 887, 1247
MmeI	TCCRAC	3 cut(s)	249, 273, 861
Mph1103I	ATGCAT	1 cut(s)	1404
MreI	CGCCGGCG	1 cut(s)	740
MroI	TCCGGA	1 cut(s)	756
MroNI	GCCGGC	1 cut(s)	740
MseI	TTAA	4 cut(s)	312, 734, 858, 1353
MslI	CAYNNNNRTG	1 cut(s)	635
MspA1I	CMGCKG	3 cut(s)	377, 723, 1161
MvaI	CCWGG	4 cut(s)	793, 899, 1001, 1374
MvnI	CGCG	6 cut(s)	416, 515, 623, 1063, 1082, 1136
MwoI	GCNNNNNNNGC	6 cut(s)	113, 374, 578, 1072, 1203, 1251
NaeI	GCCGGC	1 cut(s)	742
NarI	GGCGCC	1 cut(s)	366
NciI	CCSGG	9 cut(s)	202, 230, 231, 281, 308, 527, 587, 875, 1234
NcoI	CCATGG	2 cut(s)	573, 774
NdeII	GATC	6 cut(s)	401, 436, 600, 753, 886, 1327
NgoMIV	GCCGGC	1 cut(s)	740
NlaIII	CATG	8 cut(s)	75, 394, 577, 640, 778, 1258, 1402, 1406
NmeAIII	GCCGAG	2 cut(s)	78, 619
NmuCI	GTSAC	4 cut(s)	190, 394, 1177, 1332
NsiI	ATGCAT	1 cut(s)	1404
NspI	RCATGY	2 cut(s)	1258, 1402
NspV	TTCGAA	1 cut(s)	969
PaeI	GCATGC	1 cut(s)	1258
PaeR7I	CTCGAG	1 cut(s)	785
PceI	AGGCCT	2 cut(s)	65, 791
PciSI	GCTCTTC	1 cut(s)	530
PcsI	WCGNNNNNNNCGW	3 cut(s)	186, 848, 899
PdiI	GCCGGC	1 cut(s)	742
PfeI	GAWTC	7 cut(s)	238, 385, 424, 453, 553, 706, 1418
PfoI	TCCNGGA	1 cut(s)	873
PkrI	GCNGC	7 cut(s)	104, 376, 408, 447, 571, 1065, 1160
PleI	GAGTC	3 cut(s)	608, 886, 1246
PluTI	GGCGCC	1 cut(s)	369
PpsI	GAGTC	3 cut(s)	608, 886, 1246
PpuMI	RGGWCCY	1 cut(s)	1376
PshAI	GACNNNNGTC	1 cut(s)	231
Psp5II	RGGWCCY	1 cut(s)	1376
Psp6I	CCWGG	4 cut(s)	791, 897, 999, 1372
PspFI	CCCAGC	2 cut(s)	693, 1245
PspGI	CCWGG	4 cut(s)	791, 897, 999, 1372
PspOMI	GGGCCC	2 cut(s)	696, 805
PspPPI	RGGWCCY	1 cut(s)	1376
PspXI	VCTCGAGB	1 cut(s)	785
PstI	CTGCAG	2 cut(s)	482, 1208
PsuI	RGATCY	2 cut(s)	600, 1327
PvuII	CAGCTG	3 cut(s)	377, 723, 1161
RsaI	GTAC	5 cut(s)	187, 665, 905, 1022, 1148
RsaNI	GTAC	5 cut(s)	186, 664, 904, 1021, 1147
RseI	CAYNNNNRTG	1 cut(s)	635
SalI	GTCGAC	1 cut(s)	611
SapI	GCTCTTC	1 cut(s)	530
SaqAI	TTAA	4 cut(s)	312, 734, 858, 1353
SatI	GCNGC	7 cut(s)	103, 375, 407, 446, 570, 1064, 1159
Sau3AI	GATC	6 cut(s)	401, 436, 600, 753, 886, 1327
SchI	GAGTC	3 cut(s)	608, 887, 1247
SduI	GDGCHC	4 cut(s)	18, 700, 809, 1314
SexAI	ACCWGGT	1 cut(s)	1372
SfaNI	GCATC	3 cut(s)	358, 1184, 1418
SfcI	CTRYAG	3 cut(s)	242, 478, 1204
SfoI	GGCGCC	1 cut(s)	367
Sfr274I	CTCGAG	1 cut(s)	785
SfuI	TTCGAA	1 cut(s)	969
SgrAI	CRCCGGYG	1 cut(s)	740
SinI	GGWCC	8 cut(s)	141, 204, 233, 264, 771, 1213, 1376, 1385
SlaI	CTCGAG	1 cut(s)	785
SmaI	CCCGGG	1 cut(s)	231
SmiMI	CAYNNNNRTG	1 cut(s)	635
SmlI	CTYRAG	1 cut(s)	785
SmoI	CTYRAG	1 cut(s)	785
SphI	GCATGC	1 cut(s)	1258
Sse9I	AATT	3 cut(s)	175, 208, 647
SseBI	AGGCCT	2 cut(s)	65, 791
SspDI	GGCGCC	1 cut(s)	365
StuI	AGGCCT	2 cut(s)	65, 791
StyI	CCWWGG	3 cut(s)	60, 573, 774
TaaI	ACNGT	5 cut(s)	190, 246, 654, 1106, 1173
TaiI	ACGT	2 cut(s)	857, 1059
TaqI	TCGA	4 cut(s)	41, 612, 786, 969
TasI	AATT	3 cut(s)	175, 208, 647
TatI	WGTACW	2 cut(s)	663, 1020
TauI	GCSGC	3 cut(s)	105, 572, 1066
TfiI	GAWTC	7 cut(s)	238, 385, 424, 453, 553, 706, 1418
Tru1I	TTAA	4 cut(s)	312, 734, 858, 1353
Tru9I	TTAA	4 cut(s)	312, 734, 858, 1353
TscAI	CASTG	4 cut(s)	344, 773, 1213, 1329
TseFI	GTSAC	4 cut(s)	190, 394, 1177, 1332
TseI	GCWGC	4 cut(s)	374, 406, 445, 1158
Tsp45I	GTSAC	4 cut(s)	190, 394, 1177, 1332
TspDTI	ATGAA	3 cut(s)	136, 348, 548
TspGWI	ACGGA	3 cut(s)	554, 1040, 1320
TspMI	CCCGGG	1 cut(s)	229
TspRI	CASTG	4 cut(s)	344, 773, 1213, 1329
VneI	GTGCAC	1 cut(s)	1310
VpaK11BI	GGWCC	8 cut(s)	141, 204, 233, 264, 771, 1213, 1376, 1385
XceI	RCATGY	2 cut(s)	1258, 1402
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1205
XhoI	CTCGAG	1 cut(s)	785
XmaI	CCCGGG	1 cut(s)	229
XmiI	GTMKAC	1 cut(s)	612
Zsp2I	ATGCAT	1 cut(s)	1404

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.