pycom10g17250

xyloglucan 6-xylosyltransferase activity

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr10
OG0001277
Physical Location & Seq
Reverse (-)
20472918 .. 20478285
5368 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom10g17250.1

Sequence Viewer

Length: 2652 bp
ATGGGAGGGTCTTTCCAACGCAACGAACACAAACTGTACAAGATCATGTGCAGATTGAATACACATAACTCACTTACGGCTCACCAAAAGCCGACCATACTGGTTGAGCCGGAGAGGATTAACATGCACTTTAACATCCCGTGTGCCGTACTAACTACTAAGACACGACGTGACCTAACATCCCAACAATCTCCAGTGCACTTAGATGCCCTTGTAGCTTTCTTGGAAATGGGTTCATCAAAGTACGCTCCACCTAGACGTTCAGTTCTCCACAATGCCTCTTGTTTAATCGCTTGCGGGTTCCTATTTGCCGCAGGAGCAGCTTTGGCTGTATCCTTGGGTTTGGCTCTCCTGCCCGTCATAAACCCCGACACAAACTTTGACAACTTCATCACCTGGAACAAAGTTACCCAAGGCCTTGACCCAGGATATGATCCAGCTGAGCCTACATTCTATGATGATCCAAACGTCAGCTACTCGATTGGGCAACCTATGGAAGACTGGGACGAGAAGCGTAAGAAGTGGCTGCTGCATCACCCTTCCTTTGCCGCTGGTGTTGGTGATCGGGTTCTTCTTGTGACAGGGTCTCAGGCAACAGCATGCAGTAACCCAGTTGGTGATCATTTGCTGCTACGGTTTTTTAAGAACAAAGTAGACTATTGCAGACTCCACGGCTATGACATCTTCTACAATAATCTGGCGTTACATCCAAAAGTGACTGGCGCCTGGGCCAAGTTACCTACTCTTCGTGCTGCCATGTTGGCTCATCCTGAGGCGGAGTGGATGTGGTGGGTTGACTCAGATGCGATTGTCACAGACATGGACTTCAAGATCCCACTAGAGAGATACAAGGACCATAACCTAGTTGTGTATGGCTGGTGGCATGAGATATACGACAAGCACAGCTGGACAAGTATCAATAGCGGAGTGTTCTTGATACGCAACTGCCAGTGGTCCATGAACCTCATAGAGGCATGGGTCATCATGGGGCTACAGACCCCATACTATGAAAGATGGGCCCGAAAGCAATATTCATTGCTCAAAGACAAGCAAATTTCAAATTCAGACGATCAATCGGGTCTGATTTATCTTCTAATAACACAGAAAGAAAGATGGGAAAACAAGACTTATGTAGAAAATGATTACTACCTACACGGATACTGGTTGGCAACTGTGGATGATCTTGACAGCACCACCAAACGATACATGGAGATTGATAGAGAGGTGGACATGTTAAGGAGGAGACACGCGGAGAAAGTGAACCAGTTCTATGGAACCATGAGGGAGCAACATGTGAAGGATAAGGGCTACTGGAAAGATTATCTCAGAAGGCCTTTTACCACACACTTCACTGGGTGTCAACCATGCAACGGGCAATACAGCTCTGCTTACACTAGGGAAGCTTGTTGGAGTGGGATGCAGAGGGCTTTAAATTTTGCAAATAATCAAGTGCTTAGAAGATTTGGCTTCATGCATCCGGACCTGCTCAACTCCTCATTTGTGTCTCCTGTGCCATTTGATTTTCCGGTTGATCCAGACAAAGCCAAAGTACTAGCATGCATGCTCGCGCGCGCACACATTTATACATATAGCAAAGCTACAACTCAGGCACAGAGGTACCTTGTAGCTATCTTGGAAATGGGTTCACCAAAATACCATCCACCTAGACGTTCAGTTCTCCAAAAAGTCTCTTGTTTAATTGCTCACGGGTTCCTATTTGCCGGAGGAGCAGCTCTGGCACTGTCCTTGGCTTTGGCTCTCTTGTCTGTCATAAACCCCGACACAAACTTTGATGACATCACCTGTAACAAAAACAAAGTAGACTATTGCAGACTCCAATGTTGTGACATTTTTAACAACCATCTGGCGTTGCATCCAAAAGTGATTGGTTCTTGGGCGAAATGCCCGACTTTTCGGGCTGCTATGTTGGCTCATCCTGAGGCGGAGTGGATCTTATGGGTTGACTCGGACGCAATCTTCACAGATATGGACTTCAAGCTCCCTCTAGAGCGATATAAAGACCATAACCTAGTTGTGCATGGTTGGTCACATGAAGTATACGAGAAGCACAGCAGGACAAGTATCAATAGCGGGGTGTTCCTGATACGCAACTGCCAGTGGTCCACGGACCTCATAGAGGAATGGATCATCATGGGGCCACAGAGCCCAGACTACGAACGATGGGCACAAATACAAAGTTCAGTGACCAAAGACAAGCAAATTACAAATTCAGACGATCAATCGGGTCTGATTTATCTTCTAATAGCACACAAAGAAACCTGGGCGGACAAGACTTACCTAGAGAAGGAATTCTCCCTACACGGATACTGGTTGGCAGTAGTGAACGGTCTTGACAACATCACCAAAATACACATGAAGGTGGATATAGAGGTGGCCGTGTTGACAAGGAGACACGCGGAGAAGGTGAGCCAATTCTATGGAGCTATGAGAGAGCACTATCTGAAGGATAAGGGCTACTGGAAAGATTATCTCAGAAGGCCTTTTGTCACGCACTTCAGTGGGTGTCAACCATGCAGTGGGCAACACAGCCCCGCTTTCACTTGGGAAGCTTGTTGGGAAGTGATGCAGAGGGCTTTAAATTTTGCAGATAATCAAGTGCTTAGCAGATTTGGCTTTGTGCATCCCGACTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000009 GO:0000030 GO:0000032 GO:0000136 GO:0000137 GO:0000139 GO:0000271 GO:0000278 GO:0000281 GO:0000910 GO:0000917 GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005768 GO:0005783 GO:0005794 GO:0005795 GO:0005802 GO:0005975 GO:0005976 GO:0006056 GO:0006057 GO:0006080 GO:0006464 GO:0006486 GO:0006487 GO:0006807 GO:0007049 GO:0008150 GO:0008152 GO:0008378 GO:0009058 GO:0009059 GO:0009100 GO:0009101 GO:0009272 GO:0009987 GO:0010191 GO:0010192 GO:0010392 GO:0012505 GO:0016020 GO:0016021 GO:0016043 GO:0016051 GO:0016740 GO:0016757 GO:0016758 GO:0019538 GO:0022402 GO:0022607 GO:0030173 GO:0031090 GO:0031224 GO:0031228 GO:0031278 GO:0031300 GO:0031301 GO:0031410 GO:0031501 GO:0031506 GO:0031982 GO:0031984 GO:0031985 GO:0032506 GO:0032991 GO:0034645 GO:0036211 GO:0042125 GO:0042546 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0043413 GO:0044036 GO:0044038 GO:0044085 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044267 GO:0044422 GO:0044424 GO:0044425 GO:0044431 GO:0044444 GO:0044446 GO:0044464 GO:0051069 GO:0051070 GO:0051301 GO:0061640 GO:0070085 GO:0070589 GO:0071554 GO:0071704 GO:0071840 GO:0071852 GO:0090529 GO:0097502 GO:0097708 GO:0098588 GO:0098791 GO:0098796 GO:1901135 GO:1901137 GO:1901564 GO:1901566 GO:1901576 GO:1902410 GO:1902494 GO:1903047 GO:1990234
KEGG Pathways
Metabolic & Signaling
ko00513 ko01100 map00513 map01100
Pfam Domains
Protein Families
Glyco_transf_34

Protein Analysis

884

Amino Acids

101.99

Weight (kDa)

7.4

Isoelectric Point (pI)

40.4

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Glyco_transf_34 PF05637 189 - 458 4.2e-54 galactosyl transferase GMA12/MNN10 family
Glyco_transf_34 PF05637 601 - 847 1.2e-41 galactosyl transferase GMA12/MNN10 family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 1491
Acc65I GGTACC 1 cut(s) 1617
AccB1I GGYRCC 2 cut(s) 722, 1617
AccB7I CCANNNNNTGG 1 cut(s) 2537
AccI GTMKAC 3 cut(s) 654, 1821, 2058
AccII CGCG 5 cut(s) 1250, 1568, 1570, 1572, 2417
AccIII TCCGGA 1 cut(s) 1477
AclWI GGATC 6 cut(s) 428, 455, 826, 1526, 1958, 2153
AcoI YGGCCR 1 cut(s) 2394
AcsI RAATTY 6 cut(s) 1053, 1060, 1432, 2227, 2309, 2599
AcuI CTGAAG 2 cut(s) 2483, 2500
AcyI GRCGYC 1 cut(s) 723
AdeI CACNNNGTG 2 cut(s) 170, 1356
AfaI GTAC 5 cut(s) 38, 150, 245, 1551, 1619
AfiI CCNNNNNNNGG 5 cut(s) 970, 1370, 2137, 2305, 2537
AflIII ACRYGT 2 cut(s) 1230, 1291
AgsI TTSAA 4 cut(s) 58, 829, 1059, 1996
AjiI CACGTC 1 cut(s) 170
AjnI CCWGG 4 cut(s) 395, 424, 725, 2279
AleI CACNNNNGTG 1 cut(s) 2517
Alw21I GWGCWC 2 cut(s) 201, 2457
Alw26I GTCTC 5 cut(s) 591, 1237, 1509, 1693, 2404
Alw44I GTGCAC 1 cut(s) 197
AlwI GGATC 6 cut(s) 428, 455, 826, 1526, 1958, 2153
Aor13HI TCCGGA 1 cut(s) 1477
AoxI GGCC 7 cut(s) 415, 729, 1017, 1331, 2156, 2394, 2498
ApaI GGGCCC 1 cut(s) 1021
ApaLI GTGCAC 1 cut(s) 197
ApeKI GCWGC 7 cut(s) 320, 526, 529, 628, 752, 1730, 1919
ApoI RAATTY 6 cut(s) 1053, 1060, 1432, 2227, 2309, 2599
ArsI GACNNNNNNTTYG 4 cut(s) 362, 394, 1772, 1804
Asp700I GAANNNNTTC 2 cut(s) 1265, 2309
Asp718I GGTACC 1 cut(s) 1617
AspLEI GCGC 4 cut(s) 725, 1570, 1572, 1574
AspS9I GGNCC 9 cut(s) 729, 853, 954, 1017, 1018, 1480, 2121, 2128, 2156
AsuHPI GGTGA 9 cut(s) 74, 385, 527, 572, 629, 1638, 1792, 2353, 2437
AvaII GGWCC 5 cut(s) 853, 954, 1480, 2121, 2128
AxyI CCTNAGG 2 cut(s) 771, 1938
BaeGI GKGCMC 3 cut(s) 201, 1021, 2188
BaeI ACNNNNGTAYC 2 cut(s) 1601, 1634
BanI GGYRCC 2 cut(s) 722, 1617
BanII GRGCYC 2 cut(s) 1021, 2168
BarI GAAGNNNNNNTAC 2 cut(s) 1321, 1353
BbsI GAAGAC 1 cut(s) 504
Bbv12I GWGCWC 2 cut(s) 201, 2457
BbvI GCAGC 7 cut(s) 332, 513, 516, 615, 739, 1742, 1906
BccI CCATC 5 cut(s) 1008, 1107, 1665, 1869, 2175
BceAI ACGGC 4 cut(s) 93, 131, 688, 2381
BciT130I CCWGG 4 cut(s) 397, 426, 727, 2281
BciVI GTATCC 3 cut(s) 343, 1151, 2318
BclI TGATCA 1 cut(s) 619
BcoDI GTCTC 5 cut(s) 591, 1237, 1509, 1693, 2404
BfaI CTAG 9 cut(s) 255, 839, 863, 1395, 1553, 1665, 2006, 2030, 2300
BfmI CTRYAG 1 cut(s) 992
BfoI RGCGCY 1 cut(s) 726
BfuAI ACCTGC 1 cut(s) 1491
BfuI GTATCC 3 cut(s) 343, 1151, 2318
BglI GCCNNNNNGGC 1 cut(s) 761
BisI GCNGC 9 cut(s) 312, 321, 527, 530, 549, 629, 753, 1731, 1920
BlpI GCTNAGC 2 cut(s) 441, 2621
BlsI GCNGC 9 cut(s) 313, 322, 528, 531, 550, 630, 754, 1732, 1921
BmcAI AGTACT 1 cut(s) 1551
Bme1390I CCNGG 4 cut(s) 397, 426, 727, 2281
Bme18I GGWCC 5 cut(s) 853, 954, 1480, 2121, 2128
BmgBI CACGTC 1 cut(s) 170
BmgT120I GGNCC 9 cut(s) 729, 853, 954, 1017, 1018, 1480, 2121, 2128, 2156
BmiI GGNNCC 7 cut(s) 302, 724, 1019, 1276, 1619, 1712, 2157
BmrFI CCNGG 4 cut(s) 397, 426, 727, 2281
BmrI ACTGGG 3 cut(s) 511, 605, 1362
BmsI GCATC 7 cut(s) 196, 541, 793, 1407, 1483, 1882, 2574
BmuI ACTGGG 3 cut(s) 511, 605, 1362
BpiI GAAGAC 1 cut(s) 504
BpmI CTGGAG 1 cut(s) 177
Bpu1102I GCTNAGC 2 cut(s) 441, 2621
BsaHI GRCGYC 1 cut(s) 723
BsaI GGTCTC 1 cut(s) 591
BsaJI CCNNGG 8 cut(s) 336, 412, 424, 670, 726, 1746, 2124, 2280
BsaWI WCCGGW 2 cut(s) 1477, 1525
BsaXI ACNNNNNCTCC 2 cut(s) 770, 800
Bsc4I CCNNNNNNNGG 5 cut(s) 970, 1370, 2137, 2305, 2537
Bse21I CCTNAGG 2 cut(s) 771, 1938
Bse3DI GCAATG 1 cut(s) 1034
BseAI TCCGGA 1 cut(s) 1477
BseBI CCWGG 4 cut(s) 397, 426, 727, 2281
BseDI CCNNGG 8 cut(s) 336, 412, 424, 670, 726, 1746, 2124, 2280
BseLI CCNNNNNNNGG 5 cut(s) 970, 1370, 2137, 2305, 2537
BseMI GCAATG 1 cut(s) 1034
BseMII CTCAG 8 cut(s) 432, 602, 762, 813, 1339, 1619, 1929, 2506
BsePI GCGCGC 2 cut(s) 1568, 1570
BseRI GAGGAG 3 cut(s) 1255, 1483, 1740
BseSI GKGCMC 3 cut(s) 201, 1021, 2188
BseXI GCAGC 7 cut(s) 332, 513, 516, 615, 739, 1742, 1906
BsgI GTGCAG 1 cut(s) 70
Bsh1236I CGCG 5 cut(s) 1250, 1568, 1570, 1572, 2417
BshFI GGCC 7 cut(s) 417, 731, 1019, 1333, 2158, 2396, 2500
BshNI GGYRCC 2 cut(s) 722, 1617
BsiHKAI GWGCWC 2 cut(s) 201, 2457
BsiSI CCGG 4 cut(s) 110, 1478, 1526, 1722
BslFI GGGAC 1 cut(s) 518
BslI CCNNNNNNNGG 5 cut(s) 970, 1370, 2137, 2305, 2537
BsmAI GTCTC 5 cut(s) 591, 1237, 1509, 1693, 2404
BsmFI GGGAC 1 cut(s) 518
BsnI GGCC 7 cut(s) 417, 731, 1019, 1333, 2158, 2396, 2500
Bso31I GGTCTC 1 cut(s) 591
Bsp120I GGGCCC 1 cut(s) 1017
Bsp1286I GDGCHC 5 cut(s) 201, 1021, 2168, 2188, 2457
Bsp13I TCCGGA 1 cut(s) 1477
Bsp1407I TGTACA 1 cut(s) 36
Bsp1720I GCTNAGC 2 cut(s) 441, 2621
BspANI GGCC 7 cut(s) 417, 731, 1019, 1333, 2158, 2396, 2500
BspCNI CTCAG 8 cut(s) 433, 601, 763, 812, 1338, 1618, 1930, 2505
BspEI TCCGGA 1 cut(s) 1477
BspFNI CGCG 5 cut(s) 1250, 1568, 1570, 1572, 2417
BspLI GGNNCC 7 cut(s) 302, 724, 1019, 1276, 1619, 1712, 2157
BspMI ACCTGC 1 cut(s) 1491
BspPI GGATC 6 cut(s) 428, 455, 826, 1526, 1958, 2153
BspT107I GGYRCC 2 cut(s) 722, 1617
BspTNI GGTCTC 1 cut(s) 591
BsrDI GCAATG 1 cut(s) 1034
BsrGI TGTACA 1 cut(s) 36
BssECI CCNNGG 8 cut(s) 336, 412, 424, 670, 726, 1746, 2124, 2280
BssHII GCGCGC 2 cut(s) 1568, 1570
BssNAI GTATAC 1 cut(s) 2059
BssNI GRCGYC 1 cut(s) 723
BssT1I CCWWGG 3 cut(s) 336, 412, 1746
Bst1107I GTATAC 1 cut(s) 2059
Bst2UI CCWGG 4 cut(s) 397, 426, 727, 2281
Bst4CI ACNGT 5 cut(s) 36, 636, 1174, 1743, 2348
Bst6I CTCTTC 1 cut(s) 750
BstACI GRCGYC 1 cut(s) 723
BstAUI TGTACA 1 cut(s) 36
BstC8I GCNNGC 7 cut(s) 295, 601, 1558, 1562, 1566, 1570, 1572
BstDSI CCRYGG 2 cut(s) 670, 2124
BstENI CCTNNNNNAGG 3 cut(s) 968, 2135, 2303
BstFNI CGCG 5 cut(s) 1250, 1568, 1570, 1572, 2417
BstH2I RGCGCY 1 cut(s) 726
BstHHI GCGC 4 cut(s) 725, 1570, 1572, 1574
BstMAI GTCTC 5 cut(s) 591, 1237, 1509, 1693, 2404
BstMWI GCNNNNNNNGC 9 cut(s) 215, 317, 320, 326, 761, 1727, 1736, 1928, 2631
BstNI CCWGG 4 cut(s) 397, 426, 727, 2281
BstNSI RCATGY 6 cut(s) 127, 603, 1234, 1295, 1560, 1564
BstSCI CCNGG 4 cut(s) 395, 424, 725, 2279
BstSFI CTRYAG 1 cut(s) 992
BstSLI GKGCMC 3 cut(s) 201, 1021, 2188
BstUI CGCG 5 cut(s) 1250, 1568, 1570, 1572, 2417
BstV1I GCAGC 7 cut(s) 332, 513, 516, 615, 739, 1742, 1906
BstV2I GAAGAC 1 cut(s) 504
BstX2I RGATCY 2 cut(s) 831, 1950
BstXI CCANNNNNNTGG 2 cut(s) 1271, 2438
BstYI RGATCY 2 cut(s) 831, 1950
BstZ17I GTATAC 1 cut(s) 2059
Bsu36I CCTNAGG 2 cut(s) 771, 1938
BsuI GTATCC 3 cut(s) 343, 1151, 2318
BsuRI GGCC 7 cut(s) 417, 731, 1019, 1333, 2158, 2396, 2500
BtgI CCRYGG 2 cut(s) 670, 2124
BtrI CACGTC 1 cut(s) 170
BtsI GCAGTG 1 cut(s) 2542
BtsIMutI CAGTG 8 cut(s) 201, 956, 1350, 1739, 2123, 2208, 2524, 2542
BveI ACCTGC 1 cut(s) 1491
Cac8I GCNNGC 7 cut(s) 295, 601, 1558, 1562, 1566, 1570, 1572
CfoI GCGC 4 cut(s) 725, 1570, 1572, 1574
Cfr13I GGNCC 9 cut(s) 729, 853, 954, 1017, 1018, 1480, 2121, 2128, 2156
CseI GACGC 1 cut(s) 1979
Csp6I GTAC 5 cut(s) 37, 149, 244, 1550, 1618
CviQI GTAC 5 cut(s) 37, 149, 244, 1550, 1618
DinI GGCGCC 1 cut(s) 724
DraI TTTAAA 2 cut(s) 1431, 2598
DraIII CACNNNGTG 2 cut(s) 170, 1356
EaeI YGGCCR 1 cut(s) 2394
Eam1104I CTCTTC 1 cut(s) 750
EarI CTCTTC 1 cut(s) 750
EciI GGCGGA 3 cut(s) 791, 1958, 2300
Eco130I CCWWGG 3 cut(s) 336, 412, 1746
Eco147I AGGCCT 3 cut(s) 417, 1333, 2500
Eco24I GRGCYC 2 cut(s) 1021, 2168
Eco31I GGTCTC 1 cut(s) 591
Eco47I GGWCC 5 cut(s) 853, 954, 1480, 2121, 2128
Eco57I CTGAAG 2 cut(s) 2483, 2500
Eco81I CCTNAGG 2 cut(s) 771, 1938
EcoNI CCTNNNNNAGG 3 cut(s) 968, 2135, 2303
EcoRI GAATTC 1 cut(s) 2309
EcoRII CCWGG 4 cut(s) 395, 424, 725, 2279
EcoT14I CCWWGG 3 cut(s) 336, 412, 1746
EcoT22I ATGCAT 2 cut(s) 1476, 1562
EcoT38I GRGCYC 2 cut(s) 1021, 2168
EgeI GGCGCC 1 cut(s) 724
EheI GGCGCC 1 cut(s) 724
ErhI CCWWGG 3 cut(s) 336, 412, 1746
FaqI GGGAC 1 cut(s) 518
FauI CCCGC 3 cut(s) 290, 2084, 2560
FbaI TGATCA 1 cut(s) 619
FblI GTMKAC 3 cut(s) 654, 1821, 2058
Fnu4HI GCNGC 9 cut(s) 312, 321, 527, 530, 549, 629, 753, 1731, 1920
FriOI GRGCYC 2 cut(s) 1021, 2168
Fsp4HI GCNGC 9 cut(s) 312, 321, 527, 530, 549, 629, 753, 1731, 1920
FspBI CTAG 9 cut(s) 255, 839, 863, 1395, 1553, 1665, 2006, 2030, 2300
GlaI GCGC 4 cut(s) 724, 1569, 1571, 1573
GluI GCNGC 9 cut(s) 312, 321, 527, 530, 549, 629, 753, 1731, 1920
GsuI CTGGAG 1 cut(s) 177
HaeII RGCGCY 1 cut(s) 726
HaeIII GGCC 7 cut(s) 417, 731, 1019, 1333, 2158, 2396, 2500
HapII CCGG 4 cut(s) 110, 1478, 1526, 1722
HgaI GACGC 1 cut(s) 1979
HhaI GCGC 4 cut(s) 725, 1570, 1572, 1574
Hin1I GRCGYC 1 cut(s) 723
Hin6I GCGC 4 cut(s) 723, 1568, 1570, 1572
HinP1I GCGC 4 cut(s) 723, 1568, 1570, 1572
HincII GTYRAC 5 cut(s) 796, 1361, 1963, 2403, 2528
HindII GTYRAC 5 cut(s) 796, 1361, 1963, 2403, 2528
HindIII AAGCTT 2 cut(s) 1401, 2568
HinfI GANTC 4 cut(s) 666, 797, 1833, 1964
HpaII CCGG 4 cut(s) 110, 1478, 1526, 1722
HphI GGTGA 9 cut(s) 74, 385, 527, 572, 629, 1638, 1792, 2353, 2437
Hpy188I TCNGA 9 cut(s) 802, 1066, 1083, 1328, 1969, 2233, 2250, 2463, 2495
Hpy99I CGWCG 1 cut(s) 171
HpyAV CCTTC 8 cut(s) 549, 1291, 1323, 2299, 2371, 2416, 2458, 2490
HpyCH4III ACNGT 5 cut(s) 36, 636, 1174, 1743, 2348
HpyCH4IV ACGT 4 cut(s) 169, 259, 468, 1669
HpyF10VI GCNNNNNNNGC 9 cut(s) 215, 317, 320, 326, 761, 1727, 1736, 1928, 2631
HpySE526I ACGT 4 cut(s) 169, 259, 468, 1669
Hsp92I GRCGYC 1 cut(s) 723
HspAI GCGC 4 cut(s) 723, 1568, 1570, 1572
KasI GGCGCC 1 cut(s) 722
Kpn2I TCCGGA 1 cut(s) 1477
KpnI GGTACC 1 cut(s) 1621
Ksp22I TGATCA 1 cut(s) 619
LmnI GCTCC 6 cut(s) 253, 317, 1285, 1727, 2004, 2441
Lsp1109I GCAGC 7 cut(s) 332, 513, 516, 615, 739, 1742, 1906
LweI GCATC 7 cut(s) 196, 541, 793, 1407, 1483, 1882, 2574
MaeI CTAG 9 cut(s) 255, 839, 863, 1395, 1553, 1665, 2006, 2030, 2300
MaeII ACGT 4 cut(s) 169, 259, 468, 1669
MauBI CGCGCGCG 1 cut(s) 1568
MboII GAAGA 8 cut(s) 509, 563, 676, 737, 1082, 1470, 1969, 2249
MflI RGATCY 2 cut(s) 831, 1950
MhlI GDGCHC 5 cut(s) 201, 1021, 2168, 2188, 2457
MluCI AATT 9 cut(s) 1053, 1060, 1432, 1698, 2220, 2227, 2309, 2432, 2599
Mly113I GGCGCC 1 cut(s) 723
MlyI GAGTC 4 cut(s) 660, 791, 1827, 1958
MmeI TCCRAC 2 cut(s) 40, 1388
Mph1103I ATGCAT 2 cut(s) 1476, 1562
MroI TCCGGA 1 cut(s) 1477
MroXI GAANNNNTTC 2 cut(s) 1265, 2309
MseI TTAA 9 cut(s) 120, 132, 287, 642, 1235, 1430, 1697, 1854, 2597
MslI CAYNNNNRTG 6 cut(s) 204, 675, 818, 1985, 2378, 2517
MspA1I CMGCKG 3 cut(s) 440, 551, 906
MspI CCGG 4 cut(s) 110, 1478, 1526, 1722
MspR9I CCNGG 4 cut(s) 397, 426, 727, 2281
MvaI CCWGG 4 cut(s) 397, 426, 727, 2281
MvnI CGCG 5 cut(s) 1250, 1568, 1570, 1572, 2417
MwoI GCNNNNNNNGC 9 cut(s) 215, 317, 320, 326, 761, 1727, 1736, 1928, 2631
NarI GGCGCC 1 cut(s) 723
NlaIV GGNNCC 7 cut(s) 302, 724, 1019, 1276, 1619, 1712, 2157
NmuCI GTSAC 8 cut(s) 170, 577, 715, 811, 1844, 2046, 2203, 2506
NsiI ATGCAT 2 cut(s) 1476, 1562
NspI RCATGY 6 cut(s) 127, 603, 1234, 1295, 1560, 1564
OliI CACNNNNGTG 1 cut(s) 2517
PaeI GCATGC 3 cut(s) 603, 1560, 1564
PauI GCGCGC 2 cut(s) 1568, 1570
PceI AGGCCT 3 cut(s) 417, 1333, 2500
PciI ACATGT 2 cut(s) 1230, 1291
PdmI GAANNNNTTC 2 cut(s) 1265, 2309
PflFI GACNNNGTC 1 cut(s) 583
PflMI CCANNNNNTGG 1 cut(s) 2537
PkrI GCNGC 9 cut(s) 313, 322, 528, 531, 550, 630, 754, 1732, 1921
PleI GAGTC 4 cut(s) 660, 791, 1827, 1958
PluTI GGCGCC 1 cut(s) 726
PpsI GAGTC 4 cut(s) 660, 791, 1827, 1958
PscI ACATGT 2 cut(s) 1230, 1291
Psp6I CCWGG 4 cut(s) 395, 424, 725, 2279
PspGI CCWGG 4 cut(s) 395, 424, 725, 2279
PspN4I GGNNCC 7 cut(s) 302, 724, 1019, 1276, 1619, 1712, 2157
PspOMI GGGCCC 1 cut(s) 1017
PspPI GGNCC 9 cut(s) 729, 853, 954, 1017, 1018, 1480, 2121, 2128, 2156
PsuI RGATCY 2 cut(s) 831, 1950
PsyI GACNNNGTC 1 cut(s) 583
PteI GCGCGC 2 cut(s) 1568, 1570
PvuII CAGCTG 2 cut(s) 440, 906
RsaI GTAC 5 cut(s) 38, 150, 245, 1551, 1619
RsaNI GTAC 5 cut(s) 37, 149, 244, 1550, 1618
RseI CAYNNNNRTG 6 cut(s) 204, 675, 818, 1985, 2378, 2517
SaqAI TTAA 9 cut(s) 120, 132, 287, 642, 1235, 1430, 1697, 1854, 2597
SatI GCNGC 9 cut(s) 312, 321, 527, 530, 549, 629, 753, 1731, 1920
Sau96I GGNCC 9 cut(s) 729, 853, 954, 1017, 1018, 1480, 2121, 2128, 2156
ScaI AGTACT 1 cut(s) 1551
SchI GAGTC 4 cut(s) 660, 791, 1827, 1958
ScrFI CCNGG 4 cut(s) 397, 426, 727, 2281
SduI GDGCHC 5 cut(s) 201, 1021, 2168, 2188, 2457
SfaNI GCATC 7 cut(s) 196, 541, 793, 1407, 1483, 1882, 2574
SfcI CTRYAG 1 cut(s) 992
SfoI GGCGCC 1 cut(s) 724
SinI GGWCC 5 cut(s) 853, 954, 1480, 2121, 2128
SmiMI CAYNNNNRTG 6 cut(s) 204, 675, 818, 1985, 2378, 2517
SphI GCATGC 3 cut(s) 603, 1560, 1564
Sse9I AATT 9 cut(s) 1053, 1060, 1432, 1698, 2220, 2227, 2309, 2432, 2599
SseBI AGGCCT 3 cut(s) 417, 1333, 2500
SspDI GGCGCC 1 cut(s) 722
SspI AATATT 1 cut(s) 1031
SspMI CTAG 9 cut(s) 255, 839, 863, 1395, 1553, 1665, 2006, 2030, 2300
StuI AGGCCT 3 cut(s) 417, 1333, 2500
StyD4I CCNGG 4 cut(s) 395, 424, 725, 2279
StyI CCWWGG 3 cut(s) 336, 412, 1746
TaaI ACNGT 5 cut(s) 36, 636, 1174, 1743, 2348
TaiI ACGT 4 cut(s) 172, 262, 471, 1672
TaqI TCGA 1 cut(s) 479
TasI AATT 9 cut(s) 1053, 1060, 1432, 1698, 2220, 2227, 2309, 2432, 2599
TatI WGTACW 2 cut(s) 36, 1549
TauI GCSGC 2 cut(s) 314, 551
Tru1I TTAA 9 cut(s) 120, 132, 287, 642, 1235, 1430, 1697, 1854, 2597
Tru9I TTAA 9 cut(s) 120, 132, 287, 642, 1235, 1430, 1697, 1854, 2597
TscAI CASTG 8 cut(s) 201, 956, 1357, 1746, 2123, 2208, 2524, 2542
TseFI GTSAC 8 cut(s) 170, 577, 715, 811, 1844, 2046, 2203, 2506
TseI GCWGC 7 cut(s) 320, 526, 529, 628, 752, 1730, 1919
Tsp45I GTSAC 8 cut(s) 170, 577, 715, 811, 1844, 2046, 2203, 2506
TspDTI ATGAA 8 cut(s) 225, 379, 974, 1023, 1023, 1459, 2067, 2390
TspGWI ACGGA 3 cut(s) 1170, 2141, 2337
TspRI CASTG 8 cut(s) 201, 956, 1357, 1746, 2123, 2208, 2524, 2542
Tth111I GACNNNGTC 1 cut(s) 583
Van91I CCANNNNNTGG 1 cut(s) 2537
VneI GTGCAC 1 cut(s) 197
VpaK11BI GGWCC 5 cut(s) 853, 954, 1480, 2121, 2128
XagI CCTNNNNNAGG 3 cut(s) 968, 2135, 2303
XapI RAATTY 6 cut(s) 1053, 1060, 1432, 2227, 2309, 2599
XbaI TCTAGA 1 cut(s) 2005
XceI RCATGY 6 cut(s) 127, 603, 1234, 1295, 1560, 1564
XcmI CCANNNNNNNNNTGG 1 cut(s) 1204
XmiI GTMKAC 3 cut(s) 654, 1821, 2058
XmnI GAANNNNTTC 2 cut(s) 1265, 2309
XspI CTAG 9 cut(s) 255, 839, 863, 1395, 1553, 1665, 2006, 2030, 2300
ZrmI AGTACT 1 cut(s) 1551
Zsp2I ATGCAT 2 cut(s) 1476, 1562
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.