Lecithin retinol acyltransferase
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_2g00790 FvH4_7g33470 FvH4_7g33520 FvH4_7g33520 FvH4_7g33520 FvH4_7g33520 FvH4_7g33520 |
| malus_domestica | MD01G1232800.v1.1 MD07G1305200.v1.1 |
| prunus_persica | Prupe.6G174600_v2.0.a1 Prupe.6G175500_v2.0.a1 Prupe.6G175600_v2.0.a1 |
| pyrus_communis | pycom01g24120 pycom07g24650 |
| rosa_chinensis | RchiOBHm_Chr1g0383441 RchiOBHm_Chr1g0383561 RchiOBHm_Chr1g0383641 RchiOBHm_Chr1g0383731 RchiOBHm_Chr6g0251191 |
| rosa_laevigata | RLG00000015475 RLG00000026100 |
| rosa_multiflora | Rmu_co8276961.1_g000001 Rmu_sc0004077.1_g000010 Rmu_sc0012471.1_g000014 Rmu_sc0012471.1_g000024 |
| rosa_roxburghii | Rroxscaffold_4G00277260 Rroxscaffold_4G00277270 Rroxscaffold_7G00216940 |
| rosa_rugosa | Rorug01G0442000 Rorug05G0500600 |
| rosa_samantha | Rh1AG467500 Rh1AG467700 Rh1BG424700 Rh1BG425100 Rh1CG437800 Rh1CG438000 Rh1DG457500 Rh1DG457900 Rh6AG010000 Rh6BG002000 Rh6CG007100 Rh6DG007600 |
| rosa_wichuraiana | Rw1G040470 Rw1G040490 Rw6G000980 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 261 |
| AarI | CACCTGC | 1 cut(s) | 129 |
| Acc36I | ACCTGC | 2 cut(s) | 98, 129 |
| AcsI | RAATTY | 1 cut(s) | 147 |
| AfaI | GTAC | 1 cut(s) | 189 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 41 |
| AflIII | ACRYGT | 1 cut(s) | 38 |
| AgsI | TTSAA | 1 cut(s) | 174 |
| AleI | CACNNNNGTG | 1 cut(s) | 305 |
| AluBI | AGCT | 1 cut(s) | 21 |
| AluI | AGCT | 1 cut(s) | 21 |
| ApoI | RAATTY | 1 cut(s) | 147 |
| AsuHPI | GGTGA | 1 cut(s) | 254 |
| AsuII | TTCGAA | 1 cut(s) | 132 |
| BauI | CACGAG | 1 cut(s) | 305 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 260, 294 |
| BfmI | CTRYAG | 1 cut(s) | 49 |
| BfuAI | ACCTGC | 2 cut(s) | 98, 129 |
| BplI | GAGNNNNNCTC | 1 cut(s) | 288 |
| Bpu14I | TTCGAA | 1 cut(s) | 132 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 41 |
| Bse1I | ACTGG | 1 cut(s) | 282 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 41 |
| BseMII | CTCAG | 1 cut(s) | 74 |
| BseNI | ACTGG | 1 cut(s) | 282 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 41 |
| Bsp119I | TTCGAA | 1 cut(s) | 132 |
| BspCNI | CTCAG | 1 cut(s) | 75 |
| BspMAI | CTGCAG | 1 cut(s) | 53 |
| BspMI | ACCTGC | 2 cut(s) | 98, 129 |
| BspT104I | TTCGAA | 1 cut(s) | 132 |
| BsrI | ACTGG | 1 cut(s) | 282 |
| BssSI | CACGAG | 1 cut(s) | 305 |
| Bst2BI | CACGAG | 1 cut(s) | 305 |
| Bst4CI | ACNGT | 1 cut(s) | 14 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 99 |
| BstBI | TTCGAA | 1 cut(s) | 132 |
| BstC8I | GCNNGC | 3 cut(s) | 6, 53, 302 |
| BstDEI | CTNAG | 1 cut(s) | 83 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 99, 297 |
| BstNSI | RCATGY | 2 cut(s) | 8, 42 |
| BstSFI | CTRYAG | 1 cut(s) | 49 |
| BveI | ACCTGC | 2 cut(s) | 98, 129 |
| Cac8I | GCNNGC | 3 cut(s) | 6, 53, 302 |
| Csp6I | GTAC | 1 cut(s) | 188 |
| CviAII | CATG | 4 cut(s) | 5, 39, 56, 227 |
| CviJI | RGCY | 2 cut(s) | 21, 114 |
| CviKI_1 | RGCY | 2 cut(s) | 21, 114 |
| CviQI | GTAC | 1 cut(s) | 188 |
| DdeI | CTNAG | 1 cut(s) | 83 |
| EcoT22I | ATGCAT | 1 cut(s) | 6 |
| FaeI | CATG | 4 cut(s) | 8, 42, 59, 230 |
| FaiI | YATR | 5 cut(s) | 6, 40, 57, 228, 261 |
| FatI | CATG | 4 cut(s) | 4, 38, 55, 226 |
| Hin1II | CATG | 4 cut(s) | 8, 42, 59, 230 |
| HphI | GGTGA | 1 cut(s) | 254 |
| Hpy188III | TCNNGA | 2 cut(s) | 27, 307 |
| Hpy99I | CGWCG | 1 cut(s) | 182 |
| HpyAV | CCTTC | 1 cut(s) | 226 |
| HpyCH4III | ACNGT | 1 cut(s) | 14 |
| HpyCH4IV | ACGT | 1 cut(s) | 190 |
| HpyCH4V | TGCA | 6 cut(s) | 4, 8, 51, 93, 153, 291 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 99, 297 |
| HpyF3I | CTNAG | 1 cut(s) | 83 |
| HpySE526I | ACGT | 1 cut(s) | 190 |
| Hsp92II | CATG | 4 cut(s) | 8, 42, 59, 230 |
| LpnPI | CCDG | 4 cut(s) | 37, 103, 134, 295 |
| MaeII | ACGT | 1 cut(s) | 190 |
| MaeIII | GTNAC | 1 cut(s) | 242 |
| MluCI | AATT | 1 cut(s) | 147 |
| MnlI | CCTC | 1 cut(s) | 290 |
| Mph1103I | ATGCAT | 1 cut(s) | 6 |
| MseI | TTAA | 1 cut(s) | 210 |
| MslI | CAYNNNNRTG | 1 cut(s) | 305 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 99, 297 |
| NlaIII | CATG | 4 cut(s) | 8, 42, 59, 230 |
| NmuCI | GTSAC | 1 cut(s) | 242 |
| NsiI | ATGCAT | 1 cut(s) | 6 |
| NspI | RCATGY | 2 cut(s) | 8, 42 |
| NspV | TTCGAA | 1 cut(s) | 132 |
| OliI | CACNNNNGTG | 1 cut(s) | 305 |
| PaeI | GCATGC | 1 cut(s) | 8 |
| PaqCI | CACCTGC | 1 cut(s) | 129 |
| PciI | ACATGT | 1 cut(s) | 38 |
| PscI | ACATGT | 1 cut(s) | 38 |
| PsiI | TTATAA | 1 cut(s) | 261 |
| PstI | CTGCAG | 1 cut(s) | 53 |
| RsaI | GTAC | 1 cut(s) | 189 |
| RsaNI | GTAC | 1 cut(s) | 188 |
| RseI | CAYNNNNRTG | 1 cut(s) | 305 |
| SaqAI | TTAA | 1 cut(s) | 210 |
| SetI | ASST | 5 cut(s) | 23, 92, 123, 193, 225 |
| SfcI | CTRYAG | 1 cut(s) | 49 |
| SfuI | TTCGAA | 1 cut(s) | 132 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 305 |
| SphI | GCATGC | 1 cut(s) | 8 |
| Sse9I | AATT | 1 cut(s) | 147 |
| TaaI | ACNGT | 1 cut(s) | 14 |
| TaiI | ACGT | 1 cut(s) | 193 |
| TaqI | TCGA | 2 cut(s) | 26, 132 |
| TasI | AATT | 1 cut(s) | 147 |
| Tru1I | TTAA | 1 cut(s) | 210 |
| Tru9I | TTAA | 1 cut(s) | 210 |
| TseFI | GTSAC | 1 cut(s) | 242 |
| Tsp45I | GTSAC | 1 cut(s) | 242 |
| TspDTI | ATGAA | 1 cut(s) | 215 |
| XapI | RAATTY | 1 cut(s) | 147 |
| XceI | RCATGY | 2 cut(s) | 8, 42 |
| Zsp2I | ATGCAT | 1 cut(s) | 6 |