Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp06

Orthogroup ID

OG0002816

Physical Location & Seq

Genomic Coordinates Forward (+)

22656344 .. 22657739

Gene Structure 1396 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.6G221100.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1200 bp

ATGGCTTTTTACAAGTGTCTTTTTTTACTCTCTCTCATGTTTAGCTCAGTTTTCGTCACCATGTCACAACAAGCTTGCACACCCCATTCATTCAACCAAAAAACATTCGATGCATGCCAAACTCTACGAGTTTTGAACTCGACAATCCACTGGAGTTATTACCCATCCAAAGGCACCGTCGACGTGGCCTTCTCACAAGCCGTGTTGAGCGACTCCAGATGGGTTGCATGGGCCATAAACCCTACGTCGACAGGCATGGTGGGCTCGCAGGCAATCGTGGCTTTCAAGAGAAGCGACGGAACCATGTCCGTTTACTCGTCGGACATTAAAAGTTATGGAACACGTTTGGAGCAAGGAAATCTTAGCTTCCCTTTGTTTGATGTCTCCGCCATCTATGAGAACAACCAGATCGTCATCTTCGCCACCATAGGGCTTCCCAATAACGTCAGCGTCGTCAACCATGTTTGGCAGCAAGGACCTTTGTCCGGAAACACACCGCAGATGCACTCGGTTTCTGGACCAAACGTTCAGTCGTTTGGAACTCTGGATTTTCTTTCTGGGAAAGTGGAAACAATCGGGAGGGCCACAAGTTCCGTGTTCAAATTGAAGATTTCTCATGGAATTATTAATACCGTCAGTTGGGGCATACTGATGCCCATTGGGGCTATTGTGGCGAGGCATTTCAAGGCAGCTGATCCAGCATGGTTTCATGCTCATAGGGCGTGTCAAATGCTGGGATATTTTGGTGGGGTTGCTGGGTTGGCAACAGGTGTTTGGCTCGGCCATAAATCTTCAGGGATTGAATATAAAGGGCACCGATGCATAGGCATCACTCTTATGGCTCTAGCTACCCTTCAGGTGATTGTTGCTTTGTGCTTGAGGCCCAAGAAGACAGACAAGCGGAGGGTGTTTTGGAACTGGTTCCACTACCTGGTGGGTTATGGAACCATCGTTCTCGGCGTTGTCAACATCCTCAAGGGCTTTGATATACTGAAGCCTGGCAAAATTTGGAAAATTTCTTACCTTATCACCATCACAGTGATAGGTTGCATTGCCGTAATGTTGGAAGCATGGAAATGGCTTTCGCTTTGGAAAAGGAAGACGGCTCAATCTGCAGAGGAGAAAACGGATATGCCAATCGAAGTTATAGTTTTGTTCTTAATTTCTTTATGCATATTTTACTATTTAAAGTACAAATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005623 GO:0005886 GO:0016020 GO:0044464 GO:0071944

KEGG Pathways

Metabolic & Signaling

ko04141 map04141

Pfam Domains

Protein Families

Cytochrom_B561 DUF568

Protein Analysis

400

Amino Acids

44.35

Weight (kDa)

9.54

Isoelectric Point (pI)

39.32

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0002816)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G59070 AT5G48750
fragaria_vesca	FvH4_1g16900 FvH4_1g19870
malus_domestica	MD02G1185700.v1.1 MD02G1186700.v1.1 MD15G1297900.v1.1
prunus_persica	Prupe.1G530600_v2.0.a1 Prupe.6G221100_v2.0.a1
pyrus_communis	pycom02g15060 pycom15g26070
rosa_chinensis	RchiOBHm_Chr2g0106931 RchiOBHm_Chr2g0107391 RchiOBHm_Chr2g0107401 RchiOBHm_Chr2g0158541
rosa_laevigata	RLG00000017544 RLG00000017577
rosa_multiflora	Rmu_sc0005896.1_g000001 Rmu_sc0010952.1_g000003 Rmu_sc0017496.1_g000004
rosa_roxburghii	Rroxscaffold_2G00091230 Rroxscaffold_2G00136380 Rroxscaffold_2G00136730
rosa_rugosa	Rorug02G0139300 Rorug02G0143100
rosa_samantha	Rh2AG190400 Rh2AG193300 Rh2AG535900 Rh2BG202000 Rh2BG205700 Rh2BG549100 Rh2CG195000 Rh2CG198600 Rh2CG198700 Rh2CG519600 Rh2DG197100 Rh2DG200600 Rh2DG558800
rosa_wichuraiana	Rw2G015320

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	2 cut(s)	173, 813
AccB7I	CCANNNNNTGG	1 cut(s)	931
AccI	GTMKAC	2 cut(s)	180, 248
AccIII	TCCGGA	1 cut(s)	485
AciI	CCGC	3 cut(s)	387, 497, 901
AclI	AACGTT	1 cut(s)	525
AclWI	GGATC	1 cut(s)	689
AcoI	YGGCCR	1 cut(s)	781
AcsI	RAATTY	2 cut(s)	1005, 1014
AcuI	CTGAAG	3 cut(s)	777, 839, 1013
AfaI	GTAC	1 cut(s)	1193
AfiI	CCNNNNNNNGG	5 cut(s)	170, 429, 485, 639, 931
AflIII	ACRYGT	1 cut(s)	341
AgsI	TTSAA	7 cut(s)	94, 136, 286, 601, 607, 685, 803
AjiI	CACGTC	1 cut(s)	184
AjnI	CCWGG	2 cut(s)	930, 997
AloI	GAACNNNNNNTCC	4 cut(s)	510, 542, 936, 968
AluBI	AGCT	5 cut(s)	45, 74, 366, 692, 848
AluI	AGCT	5 cut(s)	45, 74, 366, 692, 848
Alw26I	GTCTC	1 cut(s)	388
AlwI	GGATC	1 cut(s)	689
Aor13HI	TCCGGA	1 cut(s)	485
AoxI	GGCC	5 cut(s)	186, 231, 582, 781, 881
ApeKI	GCWGC	2 cut(s)	469, 689
ApoI	RAATTY	2 cut(s)	1005, 1014
ArsI	GACNNNNNNTTYG	4 cut(s)	162, 194, 515, 547
AseI	ATTAAT	1 cut(s)	627
Asp700I	GAANNNNTTC	1 cut(s)	920
AspS9I	GGNCC	5 cut(s)	231, 476, 518, 582, 882
AsuHPI	GGTGA	3 cut(s)	49, 871, 1021
AvaII	GGWCC	2 cut(s)	476, 518
BaeGI	GKGCMC	1 cut(s)	816
BanI	GGYRCC	2 cut(s)	173, 813
BanII	GRGCYC	1 cut(s)	266
BbsI	GAAGAC	2 cut(s)	896, 1106
BbvI	GCAGC	2 cut(s)	481, 701
BccI	CCATC	5 cut(s)	172, 213, 398, 956, 1040
BceAI	ACGGC	3 cut(s)	185, 1040, 1119
BciT130I	CCWGG	2 cut(s)	932, 999
BcoDI	GTCTC	1 cut(s)	388
BfaI	CTAG	1 cut(s)	845
BfmI	CTRYAG	1 cut(s)	1113
BisI	GCNGC	2 cut(s)	470, 690
BlsI	GCNGC	2 cut(s)	471, 691
Bme1390I	CCNGG	2 cut(s)	932, 999
Bme18I	GGWCC	2 cut(s)	476, 518
BmgBI	CACGTC	1 cut(s)	184
BmgT120I	GGNCC	5 cut(s)	231, 476, 518, 582, 882
BmiI	GGNNCC	5 cut(s)	175, 301, 815, 923, 946
BmrFI	CCNGG	2 cut(s)	932, 999
BmsI	GCATC	5 cut(s)	100, 492, 642, 809, 837
BoxI	GACNNNNGTC	1 cut(s)	481
BpiI	GAAGAC	2 cut(s)	896, 1106
BpmI	CTGGAG	2 cut(s)	172, 199
BpuEI	CTTGAG	2 cut(s)	898, 959
BsaBI	GATNNNNATC	1 cut(s)	413
BsaWI	WCCGGW	1 cut(s)	485
Bsc4I	CCNNNNNNNGG	5 cut(s)	170, 429, 485, 639, 931
Bse1I	ACTGG	2 cut(s)	155, 923
Bse3DI	GCAATG	1 cut(s)	1050
Bse8I	GATNNNNATC	1 cut(s)	413
BseAI	TCCGGA	1 cut(s)	485
BseBI	CCWGG	2 cut(s)	932, 999
BseGI	GGATG	2 cut(s)	164, 969
BseJI	GATNNNNATC	1 cut(s)	413
BseLI	CCNNNNNNNGG	5 cut(s)	170, 429, 485, 639, 931
BseMI	GCAATG	1 cut(s)	1050
BseMII	CTCAG	1 cut(s)	60
BseNI	ACTGG	2 cut(s)	155, 923
BseRI	GAGGAG	1 cut(s)	1133
BseSI	GKGCMC	1 cut(s)	816
BseXI	GCAGC	2 cut(s)	481, 701
BseYI	CCCAGC	2 cut(s)	733, 755
BshFI	GGCC	5 cut(s)	188, 233, 584, 783, 883
BshNI	GGYRCC	2 cut(s)	173, 813
BsiSI	CCGG	1 cut(s)	486
BslI	CCNNNNNNNGG	5 cut(s)	170, 429, 485, 639, 931
BsmAI	GTCTC	1 cut(s)	388
BsnI	GGCC	5 cut(s)	188, 233, 584, 783, 883
Bsp1286I	GDGCHC	2 cut(s)	266, 816
Bsp13I	TCCGGA	1 cut(s)	485
Bsp143I	GATC	2 cut(s)	408, 694
BspACI	CCGC	3 cut(s)	387, 497, 901
BspANI	GGCC	5 cut(s)	188, 233, 584, 783, 883
BspCNI	CTCAG	1 cut(s)	59
BspEI	TCCGGA	1 cut(s)	485
BspLI	GGNNCC	5 cut(s)	175, 301, 815, 923, 946
BspMAI	CTGCAG	1 cut(s)	1117
BspPI	GGATC	1 cut(s)	689
BspT107I	GGYRCC	2 cut(s)	173, 813
BsrDI	GCAATG	1 cut(s)	1050
BsrI	ACTGG	2 cut(s)	155, 923
BssMI	GATC	2 cut(s)	408, 694
Bst2UI	CCWGG	2 cut(s)	932, 999
Bst4CI	ACNGT	3 cut(s)	178, 634, 1039
BstC8I	GCNNGC	4 cut(s)	76, 115, 266, 270
BstDEI	CTNAG	2 cut(s)	46, 362
BstF5I	GGATG	2 cut(s)	164, 969
BstKTI	GATC	2 cut(s)	411, 697
BstMAI	GTCTC	1 cut(s)	388
BstMBI	GATC	2 cut(s)	408, 694
BstMWI	GCNNNNNNNGC	7 cut(s)	261, 278, 671, 698, 719, 761, 1112
BstNI	CCWGG	2 cut(s)	932, 999
BstNSI	RCATGY	1 cut(s)	117
BstPAI	GACNNNNGTC	1 cut(s)	481
BstSCI	CCNGG	2 cut(s)	930, 997
BstSFI	CTRYAG	1 cut(s)	1113
BstSLI	GKGCMC	1 cut(s)	816
BstV1I	GCAGC	2 cut(s)	481, 701
BstV2I	GAAGAC	2 cut(s)	896, 1106
BsuRI	GGCC	5 cut(s)	188, 233, 584, 783, 883
BtrI	CACGTC	1 cut(s)	184
BtsCI	GGATG	2 cut(s)	164, 969
BtsIMutI	CAGTG	2 cut(s)	148, 1044
Cac8I	GCNNGC	4 cut(s)	76, 115, 266, 270
Cfr13I	GGNCC	5 cut(s)	231, 476, 518, 582, 882
CseI	GACGC	1 cut(s)	439
CsiI	ACCWGGT	1 cut(s)	930
Csp6I	GTAC	1 cut(s)	1192
CviQI	GTAC	1 cut(s)	1192
DdeI	CTNAG	2 cut(s)	46, 362
DpnI	GATC	2 cut(s)	410, 696
DpnII	GATC	2 cut(s)	408, 694
DraI	TTTAAA	1 cut(s)	1188
EaeI	YGGCCR	1 cut(s)	781
EciI	GGCGGA	1 cut(s)	376
Eco24I	GRGCYC	1 cut(s)	266
Eco47I	GGWCC	2 cut(s)	476, 518
Eco57I	CTGAAG	3 cut(s)	777, 839, 1013
EcoO109I	RGGNCCY	1 cut(s)	476
EcoRII	CCWGG	2 cut(s)	930, 997
EcoT22I	ATGCAT	3 cut(s)	115, 824, 1175
EcoT38I	GRGCYC	1 cut(s)	266
FalI	AAGNNNNNCTT	2 cut(s)	345, 377
FblI	GTMKAC	2 cut(s)	180, 248
Fnu4HI	GCNGC	2 cut(s)	470, 690
FokI	GGATG	2 cut(s)	151, 956
FriOI	GRGCYC	1 cut(s)	266
Fsp4HI	GCNGC	2 cut(s)	470, 690
FspBI	CTAG	1 cut(s)	845
GluI	GCNGC	2 cut(s)	470, 690
GsaI	CCCAGC	2 cut(s)	737, 759
GsuI	CTGGAG	2 cut(s)	172, 199
HaeIII	GGCC	5 cut(s)	188, 233, 584, 783, 883
HapII	CCGG	1 cut(s)	486
HgaI	GACGC	1 cut(s)	439
HincII	GTYRAC	4 cut(s)	181, 249, 457, 967
HindII	GTYRAC	4 cut(s)	181, 249, 457, 967
HindIII	AAGCTT	1 cut(s)	72
HinfI	GANTC	1 cut(s)	212
HpaII	CCGG	1 cut(s)	486
HphI	GGTGA	3 cut(s)	49, 871, 1021
Hpy166II	GTNNAC	5 cut(s)	181, 249, 313, 457, 967
Hpy188I	TCNGA	1 cut(s)	322
Hpy188III	TCNNGA	6 cut(s)	216, 286, 486, 516, 545, 577
Hpy8I	GTNNAC	5 cut(s)	181, 249, 313, 457, 967
Hpy99I	CGWCG	6 cut(s)	182, 185, 250, 299, 322, 455
HpyAV	CCTTC	2 cut(s)	199, 863
HpyCH4III	ACNGT	3 cut(s)	178, 634, 1039
HpyCH4IV	ACGT	5 cut(s)	183, 245, 343, 444, 525
HpyCH4V	TGCA	8 cut(s)	78, 113, 227, 505, 822, 1050, 1115, 1173
HpyF10VI	GCNNNNNNNGC	7 cut(s)	261, 278, 671, 698, 719, 761, 1112
HpyF3I	CTNAG	2 cut(s)	46, 362
HpySE526I	ACGT	5 cut(s)	183, 245, 343, 444, 525
Kpn2I	TCCGGA	1 cut(s)	485
Kzo9I	GATC	2 cut(s)	408, 694
LmnI	GCTCC	1 cut(s)	349
Lsp1109I	GCAGC	2 cut(s)	481, 701
LweI	GCATC	5 cut(s)	100, 492, 642, 809, 837
MabI	ACCWGGT	1 cut(s)	930
MaeI	CTAG	1 cut(s)	845
MaeII	ACGT	5 cut(s)	183, 245, 343, 444, 525
MaeIII	GTNAC	2 cut(s)	55, 63
MalI	GATC	2 cut(s)	410, 696
MboI	GATC	2 cut(s)	408, 694
MboII	GAAGA	5 cut(s)	409, 619, 783, 901, 1111
MhlI	GDGCHC	2 cut(s)	266, 816
MluCI	AATT	5 cut(s)	602, 621, 1005, 1014, 1161
MlyI	GAGTC	1 cut(s)	206
MmeI	TCCRAC	2 cut(s)	300, 1044
MnlI	CCTC	6 cut(s)	573, 669, 873, 897, 983, 1111
Mph1103I	ATGCAT	3 cut(s)	115, 824, 1175
MroI	TCCGGA	1 cut(s)	485
MroXI	GAANNNNTTC	1 cut(s)	920
MseI	TTAA	4 cut(s)	327, 627, 1160, 1187
MslI	CAYNNNNRTG	4 cut(s)	650, 836, 1037, 1075
MspA1I	CMGCKG	1 cut(s)	692
MspI	CCGG	1 cut(s)	486
MspR9I	CCNGG	2 cut(s)	932, 999
MvaI	CCWGG	2 cut(s)	932, 999
MwoI	GCNNNNNNNGC	7 cut(s)	261, 278, 671, 698, 719, 761, 1112
NdeII	GATC	2 cut(s)	408, 694
NlaIV	GGNNCC	5 cut(s)	175, 301, 815, 923, 946
NmeAIII	GCCGAG	2 cut(s)	759, 936
NmuCI	GTSAC	2 cut(s)	55, 63
NsiI	ATGCAT	3 cut(s)	115, 824, 1175
NspI	RCATGY	1 cut(s)	117
PaeI	GCATGC	1 cut(s)	117
PcsI	WCGNNNNNNNCGW	2 cut(s)	450, 957
PdmI	GAANNNNTTC	1 cut(s)	920
PflMI	CCANNNNNTGG	1 cut(s)	931
PkrI	GCNGC	2 cut(s)	471, 691
PleI	GAGTC	1 cut(s)	206
PpsI	GAGTC	1 cut(s)	206
PpuMI	RGGWCCY	1 cut(s)	476
PshAI	GACNNNNGTC	1 cut(s)	481
PshBI	ATTAAT	1 cut(s)	627
Psp1406I	AACGTT	1 cut(s)	525
Psp5II	RGGWCCY	1 cut(s)	476
Psp6I	CCWGG	2 cut(s)	930, 997
PspFI	CCCAGC	2 cut(s)	733, 755
PspGI	CCWGG	2 cut(s)	930, 997
PspN4I	GGNNCC	5 cut(s)	175, 301, 815, 923, 946
PspPI	GGNCC	5 cut(s)	231, 476, 518, 582, 882
PspPPI	RGGWCCY	1 cut(s)	476
PstI	CTGCAG	1 cut(s)	1117
PvuII	CAGCTG	1 cut(s)	692
RsaI	GTAC	1 cut(s)	1193
RsaNI	GTAC	1 cut(s)	1192
RseI	CAYNNNNRTG	4 cut(s)	650, 836, 1037, 1075
SalI	GTCGAC	2 cut(s)	179, 247
SaqAI	TTAA	4 cut(s)	327, 627, 1160, 1187
SatI	GCNGC	2 cut(s)	470, 690
Sau3AI	GATC	2 cut(s)	408, 694
Sau96I	GGNCC	5 cut(s)	231, 476, 518, 582, 882
SchI	GAGTC	1 cut(s)	206
ScrFI	CCNGG	2 cut(s)	932, 999
SduI	GDGCHC	2 cut(s)	266, 816
SexAI	ACCWGGT	1 cut(s)	930
SfaNI	GCATC	5 cut(s)	100, 492, 642, 809, 837
SfcI	CTRYAG	1 cut(s)	1113
SgrDI	CGTCGACG	1 cut(s)	179
SinI	GGWCC	2 cut(s)	476, 518
SmiMI	CAYNNNNRTG	4 cut(s)	650, 836, 1037, 1075
SmlI	CTYRAG	2 cut(s)	877, 974
SmoI	CTYRAG	2 cut(s)	877, 974
SphI	GCATGC	1 cut(s)	117
Sse9I	AATT	5 cut(s)	602, 621, 1005, 1014, 1161
SsiI	CCGC	3 cut(s)	387, 497, 901
SspMI	CTAG	1 cut(s)	845
StyD4I	CCNGG	2 cut(s)	930, 997
TaaI	ACNGT	3 cut(s)	178, 634, 1039
TaiI	ACGT	5 cut(s)	186, 248, 346, 447, 528
TaqI	TCGA	5 cut(s)	108, 140, 180, 248, 1140
TasI	AATT	5 cut(s)	602, 621, 1005, 1014, 1161
TatI	WGTACW	1 cut(s)	1191
Tru1I	TTAA	4 cut(s)	327, 627, 1160, 1187
Tru9I	TTAA	4 cut(s)	327, 627, 1160, 1187
TscAI	CASTG	2 cut(s)	155, 1044
TseFI	GTSAC	2 cut(s)	55, 63
TseI	GCWGC	2 cut(s)	469, 689
Tsp45I	GTSAC	2 cut(s)	55, 63
TspDTI	ATGAA	2 cut(s)	78, 698
TspGWI	ACGGA	4 cut(s)	298, 312, 583, 1142
TspRI	CASTG	2 cut(s)	155, 1044
Van91I	CCANNNNNTGG	1 cut(s)	931
VpaK11BI	GGWCC	2 cut(s)	476, 518
VspI	ATTAAT	1 cut(s)	627
XapI	RAATTY	2 cut(s)	1005, 1014
XceI	RCATGY	1 cut(s)	117
XmiI	GTMKAC	2 cut(s)	180, 248
XmnI	GAANNNNTTC	1 cut(s)	920
XspI	CTAG	1 cut(s)	845
Zsp2I	ATGCAT	3 cut(s)	115, 824, 1175

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.