Rh2DG558800

Protein of unknown function (DUF568)

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr2D
Physical Location & Seq
Forward (+)
78820703 .. 78821566
864 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh2DG558800.1

Sequence Viewer

Length: 828 bp
ATGGCTGTTTATTCATCGCCTATAAAAATCTACGACACTCACTTAGAGCAAGGGAACCTCTCCTTTCTTGTCTACACCTTGTCCGCGTTTTACGAAAACGATTTCTTCGTTATCTTTGCCACCCTAGGGCTCCCAAACAATGTTACAACTGTGAATCAATTATGGCAACAAGGACCTCTGCATGGTAACACACCAGGTATGCACTCGATGTCAGGCCCTAACCTTAAATCCTATGGCACCTTGGATTTTCTTTCAGGCAAAGTCGTAGCAACCGGTACACATCACTCTTCGGTATCCACCATGAAAATCGCCCATGGGATAATGAACACCATTAGTTGGGGTATACTCATGCCAATCGGAGCTATCGTGGCTTGGAATTTCAAAGGGTTTGGTCCAACATGGTTCTACGTTCACGTTTCTTGCCAAATCTTGGGTTCTCTTGGTGGAATTGTTGGCTCGGTCACCGGACTCATGCTGGGTCACAAGTCTTCAAGGATCGAATACAAAGGTCACAAATGCATAGGCATCACGCTGATGAGTCTTGCCACTGTCCAGGTGCTCGCTGGGTTCCTTTTGCGGCCTAAACCGGATCACAAGTATAGGCAGTTCTGGAATTTGTTCCACTATGCCCTTGGTTACACTGCAATTGTCCTGGGCATAGTAAACATCTTCAACGGGTTTGATATATTGGAACCGCCAAAGTCGTGGAGGTGTGCCTACATGGGGATTCTCGCTACATTGATGTTTCTCGGTGTAGTAGGGGCAGCCCCACTGGAACAACAAGAGGACTCAAGCTGCGAAGACACAACTGGAACAAAGGGCGGATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

275

Amino Acids

29.99

Weight (kDa)

8.29

Isoelectric Point (pI)

33.85

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF568 PF04526 9 - 83 5.3e-17 Protein of unknown function (DUF568)
Cytochrom_B561 PF03188 132 - 227 1.9e-07 Eukaryotic cytochrome b561
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 236
AccB7I CCANNNNNTGG 2 cut(s) 336, 430
AccI GTMKAC 2 cut(s) 72, 343
AccII CGCG 1 cut(s) 86
AciI CCGC 4 cut(s) 84, 577, 695, 822
AclWI GGATC 2 cut(s) 503, 597
AcsI RAATTY 2 cut(s) 376, 613
AfaI GTAC 1 cut(s) 277
AfiI CCNNNNNNNGG 5 cut(s) 126, 182, 336, 430, 723
AgeI ACCGGT 1 cut(s) 272
AgsI TTSAA 3 cut(s) 382, 492, 673
AjnI CCWGG 3 cut(s) 193, 552, 651
AluBI AGCT 2 cut(s) 362, 795
AluI AGCT 2 cut(s) 362, 795
Alw21I GWGCWC 1 cut(s) 561
AlwI GGATC 2 cut(s) 503, 597
AoxI GGCC 2 cut(s) 214, 578
ApeKI GCWGC 2 cut(s) 764, 795
ApoI RAATTY 2 cut(s) 376, 613
AsiGI ACCGGT 1 cut(s) 272
Asp700I GAANNNNTTC 1 cut(s) 617
AspA2I CCTAGG 1 cut(s) 124
AspS9I GGNCC 3 cut(s) 173, 215, 392
AsuHPI GGTGA 1 cut(s) 454
AvaII GGWCC 2 cut(s) 173, 392
AvrII CCTAGG 1 cut(s) 124
BanI GGYRCC 1 cut(s) 236
BanII GRGCYC 1 cut(s) 132
BbsI GAAGAC 2 cut(s) 480, 807
Bbv12I GWGCWC 1 cut(s) 561
BbvI GCAGC 2 cut(s) 776, 782
BciT130I CCWGG 3 cut(s) 195, 554, 653
BciVI GTATCC 1 cut(s) 304
BfaI CTAG 1 cut(s) 125
BfuI GTATCC 1 cut(s) 304
BisI GCNGC 3 cut(s) 578, 765, 796
BlnI CCTAGG 1 cut(s) 124
BlsI GCNGC 3 cut(s) 579, 766, 797
Bme1390I CCNGG 3 cut(s) 195, 554, 653
Bme18I GGWCC 2 cut(s) 173, 392
BmgT120I GGNCC 3 cut(s) 173, 215, 392
BmiI GGNNCC 5 cut(s) 56, 131, 238, 569, 693
BmrFI CCNGG 3 cut(s) 195, 554, 653
BmsI GCATC 1 cut(s) 534
BpiI GAAGAC 2 cut(s) 480, 807
BpuEI CTTGAG 1 cut(s) 775
BsaJI CCNNGG 5 cut(s) 124, 240, 313, 631, 652
BsaWI WCCGGW 3 cut(s) 272, 464, 586
BsaXI ACNNNNNCTCC 2 cut(s) 351, 381
Bsc4I CCNNNNNNNGG 5 cut(s) 126, 182, 336, 430, 723
Bse118I RCCGGY 1 cut(s) 272
Bse1I ACTGG 2 cut(s) 777, 814
BseBI CCWGG 3 cut(s) 195, 554, 653
BseDI CCNNGG 5 cut(s) 124, 240, 313, 631, 652
BseLI CCNNNNNNNGG 5 cut(s) 126, 182, 336, 430, 723
BseNI ACTGG 2 cut(s) 777, 814
BseXI GCAGC 2 cut(s) 776, 782
BseYI CCCAGC 2 cut(s) 475, 563
Bsh1236I CGCG 1 cut(s) 86
BshFI GGCC 2 cut(s) 216, 580
BshNI GGYRCC 1 cut(s) 236
BshTI ACCGGT 1 cut(s) 272
BsiHKAI GWGCWC 1 cut(s) 561
BsiSI CCGG 3 cut(s) 273, 465, 587
BslI CCNNNNNNNGG 5 cut(s) 126, 182, 336, 430, 723
BsnI GGCC 2 cut(s) 216, 580
Bsp1286I GDGCHC 2 cut(s) 132, 561
Bsp143I GATC 2 cut(s) 495, 589
Bsp19I CCATGG 1 cut(s) 313
BspACI CCGC 4 cut(s) 84, 577, 695, 822
BspANI GGCC 2 cut(s) 216, 580
BspFNI CGCG 1 cut(s) 86
BspLI GGNNCC 5 cut(s) 56, 131, 238, 569, 693
BspPI GGATC 2 cut(s) 503, 597
BspT107I GGYRCC 1 cut(s) 236
BsrFI RCCGGY 1 cut(s) 272
BsrI ACTGG 2 cut(s) 777, 814
BssAI RCCGGY 1 cut(s) 272
BssECI CCNNGG 5 cut(s) 124, 240, 313, 631, 652
BssMI GATC 2 cut(s) 495, 589
BssNAI GTATAC 1 cut(s) 344
BssT1I CCWWGG 4 cut(s) 124, 240, 313, 631
Bst1107I GTATAC 1 cut(s) 344
Bst2UI CCWGG 3 cut(s) 195, 554, 653
Bst4CI ACNGT 2 cut(s) 151, 550
Bst6I CTCTTC 1 cut(s) 292
BstC8I GCNNGC 1 cut(s) 561
BstDEI CTNAG 1 cut(s) 43
BstDSI CCRYGG 1 cut(s) 313
BstEII GGTNACC 1 cut(s) 460
BstFNI CGCG 1 cut(s) 86
BstKTI GATC 2 cut(s) 498, 592
BstMBI GATC 2 cut(s) 495, 589
BstMWI GCNNNNNNNGC 1 cut(s) 368
BstNI CCWGG 3 cut(s) 195, 554, 653
BstPI GGTNACC 1 cut(s) 460
BstSCI CCNGG 3 cut(s) 193, 552, 651
BstUI CGCG 1 cut(s) 86
BstV1I GCAGC 2 cut(s) 776, 782
BstV2I GAAGAC 2 cut(s) 480, 807
BstXI CCANNNNNNTGG 1 cut(s) 705
BstZ17I GTATAC 1 cut(s) 344
BsuI GTATCC 1 cut(s) 304
BsuRI GGCC 2 cut(s) 216, 580
BtgI CCRYGG 1 cut(s) 313
BtsI GCAGTG 1 cut(s) 639
BtsIMutI CAGTG 3 cut(s) 546, 639, 770
Cac8I GCNNGC 1 cut(s) 561
Cfr10I RCCGGY 1 cut(s) 272
Cfr13I GGNCC 3 cut(s) 173, 215, 392
CsiI ACCWGGT 1 cut(s) 193
Csp6I GTAC 1 cut(s) 276
CspAI ACCGGT 1 cut(s) 272
CviAII CATG 7 cut(s) 182, 301, 314, 349, 399, 472, 721
CviJI RGCY 9 cut(s) 5, 130, 216, 362, 371, 456, 580, 767, 795
CviKI_1 RGCY 9 cut(s) 5, 130, 216, 362, 371, 456, 580, 767, 795
CviQI GTAC 1 cut(s) 276
DdeI CTNAG 1 cut(s) 43
DpnI GATC 2 cut(s) 497, 591
DpnII GATC 2 cut(s) 495, 589
Eam1104I CTCTTC 1 cut(s) 292
EarI CTCTTC 1 cut(s) 292
Eco130I CCWWGG 4 cut(s) 124, 240, 313, 631
Eco24I GRGCYC 1 cut(s) 132
Eco47I GGWCC 2 cut(s) 173, 392
Eco91I GGTNACC 1 cut(s) 460
EcoO109I RGGNCCY 2 cut(s) 173, 215
EcoO65I GGTNACC 1 cut(s) 460
EcoRII CCWGG 3 cut(s) 193, 552, 651
EcoT14I CCWWGG 4 cut(s) 124, 240, 313, 631
EcoT22I ATGCAT 1 cut(s) 521
EcoT38I GRGCYC 1 cut(s) 132
ErhI CCWWGG 4 cut(s) 124, 240, 313, 631
FaeI CATG 7 cut(s) 185, 304, 317, 352, 402, 475, 724
FatI CATG 7 cut(s) 181, 300, 313, 348, 398, 471, 720
FblI GTMKAC 2 cut(s) 72, 343
Fnu4HI GCNGC 3 cut(s) 578, 765, 796
FriOI GRGCYC 1 cut(s) 132
Fsp4HI GCNGC 3 cut(s) 578, 765, 796
FspBI CTAG 1 cut(s) 125
GluI GCNGC 3 cut(s) 578, 765, 796
GsaI CCCAGC 2 cut(s) 479, 567
HaeIII GGCC 2 cut(s) 216, 580
HapII CCGG 3 cut(s) 273, 465, 587
Hin1II CATG 7 cut(s) 185, 304, 317, 352, 402, 475, 724
HinfI GANTC 5 cut(s) 154, 468, 538, 727, 788
HpaII CCGG 3 cut(s) 273, 465, 587
HphI GGTGA 1 cut(s) 454
Hpy166II GTNNAC 5 cut(s) 73, 278, 344, 412, 664
Hpy188I TCNGA 1 cut(s) 359
Hpy188III TCNNGA 1 cut(s) 610
Hpy8I GTNNAC 5 cut(s) 73, 278, 344, 412, 664
HpyCH4III ACNGT 2 cut(s) 151, 550
HpyCH4IV ACGT 2 cut(s) 408, 414
HpyCH4V TGCA 4 cut(s) 181, 202, 519, 644
HpyF10VI GCNNNNNNNGC 1 cut(s) 368
HpyF3I CTNAG 1 cut(s) 43
HpySE526I ACGT 2 cut(s) 408, 414
Hsp92II CATG 7 cut(s) 185, 304, 317, 352, 402, 475, 724
Kzo9I GATC 2 cut(s) 495, 589
LmnI GCTCC 2 cut(s) 135, 359
Lsp1109I GCAGC 2 cut(s) 776, 782
LweI GCATC 1 cut(s) 534
MabI ACCWGGT 1 cut(s) 193
MaeI CTAG 1 cut(s) 125
MaeII ACGT 2 cut(s) 408, 414
MaeIII GTNAC 6 cut(s) 142, 185, 460, 479, 509, 635
MalI GATC 2 cut(s) 497, 591
MboI GATC 2 cut(s) 495, 589
MboII GAAGA 5 cut(s) 97, 279, 480, 661, 812
MfeI CAATTG 1 cut(s) 645
MhlI GDGCHC 2 cut(s) 132, 561
MluCI AATT 5 cut(s) 158, 376, 447, 613, 645
MlyI GAGTC 3 cut(s) 462, 547, 782
MmeI TCCRAC 1 cut(s) 419
MnlI CCTC 4 cut(s) 68, 186, 702, 778
Mph1103I ATGCAT 1 cut(s) 521
MroXI GAANNNNTTC 1 cut(s) 617
MseI TTAA 1 cut(s) 225
MslI CAYNNNNRTG 1 cut(s) 533
MspI CCGG 3 cut(s) 273, 465, 587
MspR9I CCNGG 3 cut(s) 195, 554, 653
MunI CAATTG 1 cut(s) 645
MvaI CCWGG 3 cut(s) 195, 554, 653
MvnI CGCG 1 cut(s) 86
MwoI GCNNNNNNNGC 1 cut(s) 368
NcoI CCATGG 1 cut(s) 313
NdeII GATC 2 cut(s) 495, 589
NlaIII CATG 7 cut(s) 185, 304, 317, 352, 402, 475, 724
NlaIV GGNNCC 5 cut(s) 56, 131, 238, 569, 693
NmuCI GTSAC 3 cut(s) 460, 479, 509
NsiI ATGCAT 1 cut(s) 521
PcsI WCGNNNNNNNCGW 2 cut(s) 105, 363
PdmI GAANNNNTTC 1 cut(s) 617
PfeI GAWTC 2 cut(s) 154, 727
PflMI CCANNNNNTGG 2 cut(s) 336, 430
PinAI ACCGGT 1 cut(s) 272
PkrI GCNGC 3 cut(s) 579, 766, 797
PleI GAGTC 3 cut(s) 462, 546, 782
PpsI GAGTC 3 cut(s) 462, 546, 782
PpuMI RGGWCCY 1 cut(s) 173
Psp5II RGGWCCY 1 cut(s) 173
Psp6I CCWGG 3 cut(s) 193, 552, 651
PspEI GGTNACC 1 cut(s) 460
PspFI CCCAGC 2 cut(s) 475, 563
PspGI CCWGG 3 cut(s) 193, 552, 651
PspN4I GGNNCC 5 cut(s) 56, 131, 238, 569, 693
PspPI GGNCC 3 cut(s) 173, 215, 392
PspPPI RGGWCCY 1 cut(s) 173
PsrI GAACNNNNNNTAC 2 cut(s) 590, 622
RsaI GTAC 1 cut(s) 277
RsaNI GTAC 1 cut(s) 276
RseI CAYNNNNRTG 1 cut(s) 533
SaqAI TTAA 1 cut(s) 225
SatI GCNGC 3 cut(s) 578, 765, 796
Sau3AI GATC 2 cut(s) 495, 589
Sau96I GGNCC 3 cut(s) 173, 215, 392
SchI GAGTC 3 cut(s) 462, 547, 782
ScrFI CCNGG 3 cut(s) 195, 554, 653
SduI GDGCHC 2 cut(s) 132, 561
SexAI ACCWGGT 1 cut(s) 193
SfaNI GCATC 1 cut(s) 534
SinI GGWCC 2 cut(s) 173, 392
SmiMI CAYNNNNRTG 1 cut(s) 533
SmlI CTYRAG 1 cut(s) 790
SmoI CTYRAG 1 cut(s) 790
Sse9I AATT 5 cut(s) 158, 376, 447, 613, 645
SsiI CCGC 4 cut(s) 84, 577, 695, 822
SspMI CTAG 1 cut(s) 125
StyD4I CCNGG 3 cut(s) 193, 552, 651
StyI CCWWGG 4 cut(s) 124, 240, 313, 631
TaaI ACNGT 2 cut(s) 151, 550
TaiI ACGT 2 cut(s) 411, 417
TaqI TCGA 2 cut(s) 206, 498
TaqII GACCGA 1 cut(s) 448
TasI AATT 5 cut(s) 158, 376, 447, 613, 645
TauI GCSGC 1 cut(s) 580
TfiI GAWTC 2 cut(s) 154, 727
Tru1I TTAA 1 cut(s) 225
Tru9I TTAA 1 cut(s) 225
TscAI CASTG 3 cut(s) 553, 646, 777
TseFI GTSAC 3 cut(s) 460, 479, 509
TseI GCWGC 2 cut(s) 764, 795
Tsp45I GTSAC 3 cut(s) 460, 479, 509
TspDTI ATGAA 2 cut(s) 317, 338
TspRI CASTG 3 cut(s) 553, 646, 777
Van91I CCANNNNNTGG 2 cut(s) 336, 430
VpaK11BI GGWCC 2 cut(s) 173, 392
XapI RAATTY 2 cut(s) 376, 613
XcmI CCANNNNNNNNNTGG 2 cut(s) 560, 629
XmaJI CCTAGG 1 cut(s) 124
XmiI GTMKAC 2 cut(s) 72, 343
XmnI GAANNNNTTC 1 cut(s) 617
XspI CTAG 1 cut(s) 125
Zsp2I ATGCAT 1 cut(s) 521
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.