DOMON domain-containing protein
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G59070 AT5G48750 |
| fragaria_vesca | FvH4_1g16900 FvH4_1g19870 |
| malus_domestica | MD02G1185700.v1.1 MD02G1186700.v1.1 MD15G1297900.v1.1 |
| prunus_persica | Prupe.1G530600_v2.0.a1 Prupe.6G221100_v2.0.a1 |
| pyrus_communis | pycom02g15060 pycom15g26070 |
| rosa_chinensis | RchiOBHm_Chr2g0106931 RchiOBHm_Chr2g0107391 RchiOBHm_Chr2g0107401 RchiOBHm_Chr2g0158541 |
| rosa_laevigata | RLG00000017544 RLG00000017577 |
| rosa_multiflora | Rmu_sc0005896.1_g000001 Rmu_sc0010952.1_g000003 Rmu_sc0017496.1_g000004 |
| rosa_roxburghii | Rroxscaffold_2G00091230 Rroxscaffold_2G00136380 Rroxscaffold_2G00136730 |
| rosa_rugosa | Rorug02G0139300 Rorug02G0143100 |
| rosa_samantha | Rh2AG190400 Rh2AG193300 Rh2AG535900 Rh2BG202000 Rh2BG205700 Rh2BG549100 Rh2CG195000 Rh2CG198600 Rh2CG198700 Rh2CG519600 Rh2DG197100 Rh2DG200600 Rh2DG558800 |
| rosa_wichuraiana | Rw2G015320 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 1 cut(s) | 1144 |
| Acc36I | ACCTGC | 1 cut(s) | 1144 |
| AccB1I | GGYRCC | 1 cut(s) | 545 |
| AccB7I | CCANNNNNTGG | 2 cut(s) | 645, 739 |
| AccI | GTMKAC | 2 cut(s) | 186, 381 |
| AccII | CGCG | 2 cut(s) | 395, 1112 |
| AclWI | GGATC | 3 cut(s) | 812, 906, 1453 |
| AcoI | YGGCCR | 1 cut(s) | 1257 |
| AcsI | RAATTY | 2 cut(s) | 685, 922 |
| AcuI | CTGAAG | 1 cut(s) | 783 |
| AcyI | GRCGYC | 1 cut(s) | 1263 |
| AfaI | GTAC | 1 cut(s) | 586 |
| AfiI | CCNNNNNNNGG | 6 cut(s) | 176, 435, 491, 645, 739, 1032 |
| AgeI | ACCGGT | 1 cut(s) | 581 |
| AgsI | TTSAA | 3 cut(s) | 222, 293, 691 |
| AjnI | CCWGG | 2 cut(s) | 502, 861 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 195, 227 |
| AluBI | AGCT | 3 cut(s) | 339, 671, 872 |
| AluI | AGCT | 3 cut(s) | 339, 671, 872 |
| AlwI | GGATC | 3 cut(s) | 812, 906, 1453 |
| AoxI | GGCC | 3 cut(s) | 523, 887, 1257 |
| ApeKI | GCWGC | 3 cut(s) | 116, 1043, 1073 |
| ApoI | RAATTY | 2 cut(s) | 685, 922 |
| AsiGI | ACCGGT | 1 cut(s) | 581 |
| Asp700I | GAANNNNTTC | 3 cut(s) | 164, 926, 1139 |
| AspA2I | CCTAGG | 1 cut(s) | 433 |
| AspS9I | GGNCC | 3 cut(s) | 482, 524, 701 |
| AsuHPI | GGTGA | 3 cut(s) | 763, 1072, 1168 |
| AsuNHI | GCTAGC | 1 cut(s) | 868 |
| AvaII | GGWCC | 2 cut(s) | 482, 701 |
| AvrII | CCTAGG | 1 cut(s) | 433 |
| BanI | GGYRCC | 1 cut(s) | 545 |
| BanII | GRGCYC | 2 cut(s) | 441, 1390 |
| BauI | CACGAG | 1 cut(s) | 1247 |
| BbsI | GAAGAC | 3 cut(s) | 789, 1121, 1142 |
| BbvI | GCAGC | 3 cut(s) | 128, 1030, 1085 |
| BccI | CCATC | 5 cut(s) | 178, 219, 296, 1357, 1432 |
| BciT130I | CCWGG | 2 cut(s) | 504, 863 |
| BciVI | GTATCC | 1 cut(s) | 613 |
| BfaI | CTAG | 4 cut(s) | 209, 249, 434, 869 |
| BfuAI | ACCTGC | 1 cut(s) | 1144 |
| BfuI | GTATCC | 1 cut(s) | 613 |
| BisI | GCNGC | 8 cut(s) | 117, 231, 887, 1044, 1074, 1110, 1194, 1197 |
| BlnI | CCTAGG | 1 cut(s) | 433 |
| BlsI | GCNGC | 8 cut(s) | 118, 232, 888, 1045, 1075, 1111, 1195, 1198 |
| Bme1390I | CCNGG | 2 cut(s) | 504, 863 |
| Bme18I | GGWCC | 2 cut(s) | 482, 701 |
| BmgT120I | GGNCC | 3 cut(s) | 482, 524, 701 |
| BmiI | GGNNCC | 6 cut(s) | 307, 365, 440, 547, 878, 1002 |
| BmrFI | CCNGG | 2 cut(s) | 504, 863 |
| BmsI | GCATC | 2 cut(s) | 843, 1213 |
| BmtI | GCTAGC | 1 cut(s) | 872 |
| BpiI | GAAGAC | 3 cut(s) | 789, 1121, 1142 |
| Bpu10I | CCTNAGC | 1 cut(s) | 1354 |
| BpuEI | CTTGAG | 1 cut(s) | 1089 |
| Bsa29I | ATCGAT | 1 cut(s) | 1457 |
| BsaHI | GRCGYC | 1 cut(s) | 1263 |
| BsaJI | CCNNGG | 9 cut(s) | 255, 279, 309, 393, 433, 549, 622, 940, 961 |
| BsaWI | WCCGGW | 3 cut(s) | 581, 773, 895 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 660, 690 |
| Bsc4I | CCNNNNNNNGG | 6 cut(s) | 176, 435, 491, 645, 739, 1032 |
| Bse118I | RCCGGY | 2 cut(s) | 581, 1259 |
| Bse1I | ACTGG | 5 cut(s) | 91, 134, 161, 1091, 1128 |
| BseBI | CCWGG | 2 cut(s) | 504, 863 |
| BseCI | ATCGAT | 1 cut(s) | 1457 |
| BseDI | CCNNGG | 9 cut(s) | 255, 279, 309, 393, 433, 549, 622, 940, 961 |
| BseGI | GGATG | 4 cut(s) | 633, 975, 1204, 1349 |
| BseLI | CCNNNNNNNGG | 6 cut(s) | 176, 435, 491, 645, 739, 1032 |
| BseNI | ACTGG | 5 cut(s) | 91, 134, 161, 1091, 1128 |
| BseX3I | CGGCCG | 1 cut(s) | 1257 |
| BseXI | GCAGC | 3 cut(s) | 128, 1030, 1085 |
| BseYI | CCCAGC | 2 cut(s) | 784, 872 |
| BsgI | GTGCAG | 1 cut(s) | 1172 |
| Bsh1236I | CGCG | 2 cut(s) | 395, 1112 |
| Bsh1285I | CGRYCG | 2 cut(s) | 1260, 1441 |
| BshFI | GGCC | 3 cut(s) | 525, 889, 1259 |
| BshNI | GGYRCC | 1 cut(s) | 545 |
| BshTI | ACCGGT | 1 cut(s) | 581 |
| BshVI | ATCGAT | 1 cut(s) | 1457 |
| BsiEI | CGRYCG | 2 cut(s) | 1260, 1441 |
| BsiSI | CCGG | 4 cut(s) | 582, 774, 896, 1260 |
| BslI | CCNNNNNNNGG | 6 cut(s) | 176, 435, 491, 645, 739, 1032 |
| BsmI | GAATGC | 1 cut(s) | 194 |
| BsnI | GGCC | 3 cut(s) | 525, 889, 1259 |
| Bsp1286I | GDGCHC | 2 cut(s) | 441, 1390 |
| Bsp143I | GATC | 6 cut(s) | 127, 804, 898, 1270, 1438, 1458 |
| Bsp19I | CCATGG | 2 cut(s) | 309, 622 |
| BspANI | GGCC | 3 cut(s) | 525, 889, 1259 |
| BspDI | ATCGAT | 1 cut(s) | 1457 |
| BspFNI | CGCG | 2 cut(s) | 395, 1112 |
| BspLI | GGNNCC | 6 cut(s) | 307, 365, 440, 547, 878, 1002 |
| BspMI | ACCTGC | 1 cut(s) | 1144 |
| BspOI | GCTAGC | 1 cut(s) | 872 |
| BspPI | GGATC | 3 cut(s) | 812, 906, 1453 |
| BspT107I | GGYRCC | 1 cut(s) | 545 |
| BsrFI | RCCGGY | 2 cut(s) | 581, 1259 |
| BsrI | ACTGG | 5 cut(s) | 91, 134, 161, 1091, 1128 |
| BssAI | RCCGGY | 2 cut(s) | 581, 1259 |
| BssECI | CCNNGG | 9 cut(s) | 255, 279, 309, 393, 433, 549, 622, 940, 961 |
| BssMI | GATC | 6 cut(s) | 127, 804, 898, 1270, 1438, 1458 |
| BssNI | GRCGYC | 1 cut(s) | 1263 |
| BssSI | CACGAG | 1 cut(s) | 1247 |
| BssT1I | CCWWGG | 8 cut(s) | 255, 279, 309, 433, 549, 622, 940, 961 |
| Bst2BI | CACGAG | 1 cut(s) | 1247 |
| Bst2UI | CCWGG | 2 cut(s) | 504, 863 |
| Bst4CI | ACNGT | 3 cut(s) | 184, 460, 859 |
| Bst6I | CTCTTC | 2 cut(s) | 29, 601 |
| BstACI | GRCGYC | 1 cut(s) | 1263 |
| BstC8I | GCNNGC | 5 cut(s) | 763, 870, 1187, 1191, 1261 |
| BstDEI | CTNAG | 2 cut(s) | 6, 1354 |
| BstDSI | CCRYGG | 3 cut(s) | 309, 393, 622 |
| BstEII | GGTNACC | 1 cut(s) | 769 |
| BstF5I | GGATG | 4 cut(s) | 633, 975, 1204, 1349 |
| BstFNI | CGCG | 2 cut(s) | 395, 1112 |
| BstKTI | GATC | 6 cut(s) | 130, 807, 901, 1273, 1441, 1461 |
| BstMBI | GATC | 6 cut(s) | 127, 804, 898, 1270, 1438, 1458 |
| BstMCI | CGRYCG | 2 cut(s) | 1260, 1441 |
| BstMWI | GCNNNNNNNGC | 6 cut(s) | 236, 284, 677, 1376, 1385, 1394 |
| BstNI | CCWGG | 2 cut(s) | 504, 863 |
| BstNSI | RCATGY | 1 cut(s) | 123 |
| BstPI | GGTNACC | 1 cut(s) | 769 |
| BstSCI | CCNGG | 2 cut(s) | 502, 861 |
| BstUI | CGCG | 2 cut(s) | 395, 1112 |
| BstV1I | GCAGC | 3 cut(s) | 128, 1030, 1085 |
| BstV2I | GAAGAC | 3 cut(s) | 789, 1121, 1142 |
| BstXI | CCANNNNNNTGG | 2 cut(s) | 262, 1014 |
| BstZI | CGGCCG | 1 cut(s) | 1257 |
| Bsu15I | ATCGAT | 1 cut(s) | 1457 |
| BsuI | GTATCC | 1 cut(s) | 613 |
| BsuRI | GGCC | 3 cut(s) | 525, 889, 1259 |
| BsuTUI | ATCGAT | 1 cut(s) | 1457 |
| BtgI | CCRYGG | 3 cut(s) | 309, 393, 622 |
| BtgZI | GCGATG | 2 cut(s) | 309, 315 |
| BtsCI | GGATG | 4 cut(s) | 633, 975, 1204, 1349 |
| BtsI | GCAGTG | 1 cut(s) | 948 |
| BtsIMutI | CAGTG | 2 cut(s) | 948, 1084 |
| BveI | ACCTGC | 1 cut(s) | 1144 |
| Cac8I | GCNNGC | 5 cut(s) | 763, 870, 1187, 1191, 1261 |
| Cfr10I | RCCGGY | 2 cut(s) | 581, 1259 |
| Cfr13I | GGNCC | 3 cut(s) | 482, 524, 701 |
| Cfr42I | CCGCGG | 1 cut(s) | 396 |
| ClaI | ATCGAT | 1 cut(s) | 1457 |
| CseI | GACGC | 1 cut(s) | 1252 |
| CsiI | ACCWGGT | 1 cut(s) | 502 |
| Csp6I | GTAC | 1 cut(s) | 585 |
| CspAI | ACCGGT | 1 cut(s) | 581 |
| CviQI | GTAC | 1 cut(s) | 585 |
| DdeI | CTNAG | 2 cut(s) | 6, 1354 |
| DpnI | GATC | 6 cut(s) | 129, 806, 900, 1272, 1440, 1460 |
| DpnII | GATC | 6 cut(s) | 127, 804, 898, 1270, 1438, 1458 |
| EaeI | YGGCCR | 1 cut(s) | 1257 |
| EagI | CGGCCG | 1 cut(s) | 1257 |
| Eam1104I | CTCTTC | 2 cut(s) | 29, 601 |
| EarI | CTCTTC | 2 cut(s) | 29, 601 |
| EclXI | CGGCCG | 1 cut(s) | 1257 |
| Eco130I | CCWWGG | 8 cut(s) | 255, 279, 309, 433, 549, 622, 940, 961 |
| Eco24I | GRGCYC | 2 cut(s) | 441, 1390 |
| Eco47I | GGWCC | 2 cut(s) | 482, 701 |
| Eco52I | CGGCCG | 1 cut(s) | 1257 |
| Eco57I | CTGAAG | 1 cut(s) | 783 |
| Eco91I | GGTNACC | 1 cut(s) | 769 |
| EcoO109I | RGGNCCY | 2 cut(s) | 482, 524 |
| EcoO65I | GGTNACC | 1 cut(s) | 769 |
| EcoRII | CCWGG | 2 cut(s) | 502, 861 |
| EcoT14I | CCWWGG | 8 cut(s) | 255, 279, 309, 433, 549, 622, 940, 961 |
| EcoT22I | ATGCAT | 1 cut(s) | 830 |
| EcoT38I | GRGCYC | 2 cut(s) | 441, 1390 |
| ErhI | CCWWGG | 8 cut(s) | 255, 279, 309, 433, 549, 622, 940, 961 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 1123, 1155 |
| FauI | CCCGC | 4 cut(s) | 1198, 1338, 1375, 1402 |
| FblI | GTMKAC | 2 cut(s) | 186, 381 |
| Fnu4HI | GCNGC | 8 cut(s) | 117, 231, 887, 1044, 1074, 1110, 1194, 1197 |
| FokI | GGATG | 4 cut(s) | 640, 962, 1191, 1336 |
| FriOI | GRGCYC | 2 cut(s) | 441, 1390 |
| Fsp4HI | GCNGC | 8 cut(s) | 117, 231, 887, 1044, 1074, 1110, 1194, 1197 |
| FspBI | CTAG | 4 cut(s) | 209, 249, 434, 869 |
| GluI | GCNGC | 8 cut(s) | 117, 231, 887, 1044, 1074, 1110, 1194, 1197 |
| GsaI | CCCAGC | 2 cut(s) | 788, 876 |
| HaeIII | GGCC | 3 cut(s) | 525, 889, 1259 |
| HapII | CCGG | 4 cut(s) | 582, 774, 896, 1260 |
| HgaI | GACGC | 1 cut(s) | 1252 |
| Hin1I | GRCGYC | 1 cut(s) | 1263 |
| HinfI | GANTC | 8 cut(s) | 218, 463, 847, 1036, 1102, 1287, 1446, 1454 |
| HpaII | CCGG | 4 cut(s) | 582, 774, 896, 1260 |
| HphI | GGTGA | 3 cut(s) | 763, 1072, 1168 |
| Hpy166II | GTNNAC | 8 cut(s) | 187, 272, 382, 400, 587, 721, 973, 1080 |
| Hpy188I | TCNGA | 5 cut(s) | 200, 668, 684, 792, 1268 |
| Hpy188III | TCNNGA | 3 cut(s) | 222, 919, 1324 |
| Hpy8I | GTNNAC | 8 cut(s) | 187, 272, 382, 400, 587, 721, 973, 1080 |
| Hpy99I | CGWCG | 1 cut(s) | 1446 |
| HpyAV | CCTTC | 1 cut(s) | 1125 |
| HpyCH4III | ACNGT | 3 cut(s) | 184, 460, 859 |
| HpyCH4IV | ACGT | 2 cut(s) | 717, 723 |
| HpyCH4V | TGCA | 9 cut(s) | 116, 194, 490, 511, 828, 953, 1046, 1153, 1185 |
| HpyF10VI | GCNNNNNNNGC | 6 cut(s) | 236, 284, 677, 1376, 1385, 1394 |
| HpyF3I | CTNAG | 2 cut(s) | 6, 1354 |
| HpySE526I | ACGT | 2 cut(s) | 717, 723 |
| Hsp92I | GRCGYC | 1 cut(s) | 1263 |
| KroI | GCCGGC | 1 cut(s) | 1259 |
| KroNI | GCCGGC | 1 cut(s) | 1261 |
| KspI | CCGCGG | 1 cut(s) | 396 |
| Kzo9I | GATC | 6 cut(s) | 127, 804, 898, 1270, 1438, 1458 |
| LmnI | GCTCC | 3 cut(s) | 355, 444, 668 |
| Lsp1109I | GCAGC | 3 cut(s) | 128, 1030, 1085 |
| LweI | GCATC | 2 cut(s) | 843, 1213 |
| MabI | ACCWGGT | 1 cut(s) | 502 |
| MaeI | CTAG | 4 cut(s) | 209, 249, 434, 869 |
| MaeII | ACGT | 2 cut(s) | 717, 723 |
| MaeIII | GTNAC | 6 cut(s) | 451, 494, 769, 818, 944, 1307 |
| MalI | GATC | 6 cut(s) | 129, 806, 900, 1272, 1440, 1460 |
| MboI | GATC | 6 cut(s) | 127, 804, 898, 1270, 1438, 1458 |
| MboII | GAAGA | 9 cut(s) | 16, 42, 422, 588, 789, 1126, 1147, 1296, 1463 |
| MfeI | CAATTG | 1 cut(s) | 954 |
| MhlI | GDGCHC | 2 cut(s) | 441, 1390 |
| MluCI | AATT | 6 cut(s) | 160, 467, 685, 756, 922, 954 |
| MlyI | GAGTC | 2 cut(s) | 856, 1096 |
| MnlI | CCTC | 7 cut(s) | 377, 495, 989, 1011, 1092, 1152, 1185 |
| Mph1103I | ATGCAT | 1 cut(s) | 830 |
| MroNI | GCCGGC | 1 cut(s) | 1259 |
| MroXI | GAANNNNTTC | 3 cut(s) | 164, 926, 1139 |
| MseI | TTAA | 2 cut(s) | 534, 1465 |
| MslI | CAYNNNNRTG | 3 cut(s) | 842, 1209, 1314 |
| MspA1I | CMGCKG | 1 cut(s) | 395 |
| MspI | CCGG | 4 cut(s) | 582, 774, 896, 1260 |
| MspR9I | CCNGG | 2 cut(s) | 504, 863 |
| MunI | CAATTG | 1 cut(s) | 954 |
| Mva1269I | GAATGC | 1 cut(s) | 194 |
| MvaI | CCWGG | 2 cut(s) | 504, 863 |
| MvnI | CGCG | 2 cut(s) | 395, 1112 |
| MwoI | GCNNNNNNNGC | 6 cut(s) | 236, 284, 677, 1376, 1385, 1394 |
| NaeI | GCCGGC | 1 cut(s) | 1261 |
| NcoI | CCATGG | 2 cut(s) | 309, 622 |
| NdeII | GATC | 6 cut(s) | 127, 804, 898, 1270, 1438, 1458 |
| NgoMIV | GCCGGC | 1 cut(s) | 1259 |
| NheI | GCTAGC | 1 cut(s) | 868 |
| NlaIV | GGNNCC | 6 cut(s) | 307, 365, 440, 547, 878, 1002 |
| NmeAIII | GCCGAG | 2 cut(s) | 1235, 1384 |
| NmuCI | GTSAC | 3 cut(s) | 769, 818, 1307 |
| NsiI | ATGCAT | 1 cut(s) | 830 |
| NspI | RCATGY | 1 cut(s) | 123 |
| PaqCI | CACCTGC | 1 cut(s) | 1144 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 672 |
| PctI | GAATGC | 1 cut(s) | 194 |
| PdiI | GCCGGC | 1 cut(s) | 1261 |
| PdmI | GAANNNNTTC | 3 cut(s) | 164, 926, 1139 |
| PfeI | GAWTC | 6 cut(s) | 218, 463, 1036, 1287, 1446, 1454 |
| PflMI | CCANNNNNTGG | 2 cut(s) | 645, 739 |
| PinAI | ACCGGT | 1 cut(s) | 581 |
| PkrI | GCNGC | 8 cut(s) | 118, 232, 888, 1045, 1075, 1111, 1195, 1198 |
| Ple19I | CGATCG | 1 cut(s) | 1441 |
| PleI | GAGTC | 2 cut(s) | 855, 1096 |
| PpsI | GAGTC | 2 cut(s) | 855, 1096 |
| PpuMI | RGGWCCY | 1 cut(s) | 482 |
| Psp5II | RGGWCCY | 1 cut(s) | 482 |
| Psp6I | CCWGG | 2 cut(s) | 502, 861 |
| PspEI | GGTNACC | 1 cut(s) | 769 |
| PspFI | CCCAGC | 2 cut(s) | 784, 872 |
| PspGI | CCWGG | 2 cut(s) | 502, 861 |
| PspN4I | GGNNCC | 6 cut(s) | 307, 365, 440, 547, 878, 1002 |
| PspPI | GGNCC | 3 cut(s) | 482, 524, 701 |
| PspPPI | RGGWCCY | 1 cut(s) | 482 |
| PsrI | GAACNNNNNNTAC | 4 cut(s) | 253, 285, 899, 931 |
| PvuI | CGATCG | 1 cut(s) | 1441 |
| RsaI | GTAC | 1 cut(s) | 586 |
| RsaNI | GTAC | 1 cut(s) | 585 |
| RseI | CAYNNNNRTG | 3 cut(s) | 842, 1209, 1314 |
| SacII | CCGCGG | 1 cut(s) | 396 |
| SaqAI | TTAA | 2 cut(s) | 534, 1465 |
| SatI | GCNGC | 8 cut(s) | 117, 231, 887, 1044, 1074, 1110, 1194, 1197 |
| Sau3AI | GATC | 6 cut(s) | 127, 804, 898, 1270, 1438, 1458 |
| Sau96I | GGNCC | 3 cut(s) | 482, 524, 701 |
| SchI | GAGTC | 2 cut(s) | 856, 1096 |
| ScrFI | CCNGG | 2 cut(s) | 504, 863 |
| SduI | GDGCHC | 2 cut(s) | 441, 1390 |
| SexAI | ACCWGGT | 1 cut(s) | 502 |
| SfaNI | GCATC | 2 cut(s) | 843, 1213 |
| Sfr303I | CCGCGG | 1 cut(s) | 396 |
| SgrBI | CCGCGG | 1 cut(s) | 396 |
| SinI | GGWCC | 2 cut(s) | 482, 701 |
| SmiMI | CAYNNNNRTG | 3 cut(s) | 842, 1209, 1314 |
| SmlI | CTYRAG | 1 cut(s) | 1104 |
| SmoI | CTYRAG | 1 cut(s) | 1104 |
| Sse9I | AATT | 6 cut(s) | 160, 467, 685, 756, 922, 954 |
| SspMI | CTAG | 4 cut(s) | 209, 249, 434, 869 |
| StyD4I | CCNGG | 2 cut(s) | 502, 861 |
| StyI | CCWWGG | 8 cut(s) | 255, 279, 309, 433, 549, 622, 940, 961 |
| TaaI | ACNGT | 3 cut(s) | 184, 460, 859 |
| TaiI | ACGT | 2 cut(s) | 720, 726 |
| TaqI | TCGA | 9 cut(s) | 515, 573, 807, 1290, 1323, 1384, 1441, 1449, 1457 |
| TaqII | GACCGA | 2 cut(s) | 757, 1238 |
| TasI | AATT | 6 cut(s) | 160, 467, 685, 756, 922, 954 |
| TauI | GCSGC | 5 cut(s) | 233, 889, 1112, 1196, 1199 |
| TfiI | GAWTC | 6 cut(s) | 218, 463, 1036, 1287, 1446, 1454 |
| Tru1I | TTAA | 2 cut(s) | 534, 1465 |
| Tru9I | TTAA | 2 cut(s) | 534, 1465 |
| TscAI | CASTG | 2 cut(s) | 955, 1091 |
| TseFI | GTSAC | 3 cut(s) | 769, 818, 1307 |
| TseI | GCWGC | 3 cut(s) | 116, 1043, 1073 |
| Tsp45I | GTSAC | 3 cut(s) | 769, 818, 1307 |
| TspDTI | ATGAA | 6 cut(s) | 5, 312, 626, 647, 1161, 1332 |
| TspGWI | ACGGA | 2 cut(s) | 192, 1451 |
| TspRI | CASTG | 2 cut(s) | 955, 1091 |
| Van91I | CCANNNNNTGG | 2 cut(s) | 645, 739 |
| VpaK11BI | GGWCC | 2 cut(s) | 482, 701 |
| XapI | RAATTY | 2 cut(s) | 685, 922 |
| XceI | RCATGY | 1 cut(s) | 123 |
| XcmI | CCANNNNNNNNNTGG | 3 cut(s) | 262, 869, 938 |
| XmaJI | CCTAGG | 1 cut(s) | 433 |
| XmiI | GTMKAC | 2 cut(s) | 186, 381 |
| XmnI | GAANNNNTTC | 3 cut(s) | 164, 926, 1139 |
| XspI | CTAG | 4 cut(s) | 209, 249, 434, 869 |
| Zsp2I | ATGCAT | 1 cut(s) | 830 |