Prupe.7G140300_v2.0.a1

disease resistance

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp07
Physical Location & Seq
Reverse (-)
15586452 .. 15586922
471 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.7G140300.1

Sequence Viewer

Length: 471 bp
ATGGCAGGAGTAGAGACTATTCTTGGTGCTGCAATTTCGGAGCTGGTTGTTCTCCTCAAAAAAACAATCCAGAAACATAAAGATTGTCCAGCCTTGCTTAAAAATCTGGATGCTACCCTAGTGTCTTTGCATCCATTGATACAAGAGATGGAGAACCTAAACAGGTACTTGGGTCGCCCAAAGGAGGAAATAGAGAGTCCGAGAAGTCAAGTCGATGCCGGTATAAAGTGCGTTCTCGAAATCTCCAAGTCGAAGAAGGGCAAGTACATATGGAGCATGTCTCATCACCAGCTTTCTACATTGGATGCGTCTCTCAAAAGACTCCATGAGAAACTGGCGGCGCAGACAGCAAGGAATAGGATGGAGACCTTGCTTTGCACAAGGATGATTTTTGGTTTGGTGGTGGTCATTGCTCTTGTTGCTTTGTTGTTGCTTTGGAGCAACGGGCTTATTAGGCTTCACGCAAAGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
Pfam Domains
Protein Families

Protein Analysis

157

Amino Acids

17.44

Weight (kDa)

9.6

Isoelectric Point (pI)

35.49

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 1 cut(s) 338
AfaI GTAC 2 cut(s) 167, 266
AfiI CCNNNNNNNGG 1 cut(s) 184
AluBI AGCT 2 cut(s) 43, 292
AluI AGCT 2 cut(s) 43, 292
Alw26I GTCTC 4 cut(s) 8, 285, 315, 359
ApeKI GCWGC 1 cut(s) 29
AspLEI GCGC 1 cut(s) 343
AsuHPI GGTGA 1 cut(s) 278
BaeI ACNNNNGTAYC 2 cut(s) 157, 190
BarI GAAGNNNNNNTAC 2 cut(s) 248, 280
BbvI GCAGC 1 cut(s) 16
BccI CCATC 2 cut(s) 142, 355
BcoDI GTCTC 4 cut(s) 8, 285, 315, 359
BfaI CTAG 1 cut(s) 119
BisI GCNGC 2 cut(s) 30, 339
BlsI GCNGC 2 cut(s) 31, 340
BmsI GCATC 4 cut(s) 100, 139, 205, 295
BplI GAGNNNNNCTC 2 cut(s) 265, 297
BsaI GGTCTC 1 cut(s) 359
Bsc4I CCNNNNNNNGG 1 cut(s) 184
Bse118I RCCGGY 1 cut(s) 218
Bse1I ACTGG 1 cut(s) 339
Bse3DI GCAATG 1 cut(s) 408
BseGI GGATG 5 cut(s) 115, 130, 310, 366, 390
BseLI CCNNNNNNNGG 1 cut(s) 184
BseMI GCAATG 1 cut(s) 408
BseNI ACTGG 1 cut(s) 339
BseRI GAGGAG 1 cut(s) 44
BseXI GCAGC 1 cut(s) 16
BsiSI CCGG 1 cut(s) 219
BslI CCNNNNNNNGG 1 cut(s) 184
BsmAI GTCTC 4 cut(s) 8, 285, 315, 359
BsmBI CGTCTC 1 cut(s) 315
Bso31I GGTCTC 1 cut(s) 359
BspACI CCGC 1 cut(s) 338
BspTNI GGTCTC 1 cut(s) 359
BsrDI GCAATG 1 cut(s) 408
BsrFI RCCGGY 1 cut(s) 218
BsrI ACTGG 1 cut(s) 339
BssAI RCCGGY 1 cut(s) 218
BstF5I GGATG 5 cut(s) 115, 130, 310, 366, 390
BstHHI GCGC 1 cut(s) 343
BstMAI GTCTC 4 cut(s) 8, 285, 315, 359
BstMWI GCNNNNNNNGC 3 cut(s) 347, 419, 454
BstNSI RCATGY 1 cut(s) 280
BstV1I GCAGC 1 cut(s) 16
BtsCI GGATG 5 cut(s) 115, 130, 310, 366, 390
CfoI GCGC 1 cut(s) 343
Cfr10I RCCGGY 1 cut(s) 218
CseI GACGC 1 cut(s) 297
Csp6I GTAC 2 cut(s) 166, 265
CviAII CATG 2 cut(s) 277, 326
CviJI RGCY 5 cut(s) 43, 92, 292, 448, 457
CviKI_1 RGCY 5 cut(s) 43, 92, 292, 448, 457
CviQI GTAC 2 cut(s) 166, 265
Eco31I GGTCTC 1 cut(s) 359
Esp3I CGTCTC 1 cut(s) 315
FaeI CATG 2 cut(s) 280, 329
FaiI YATR 6 cut(s) 78, 224, 269, 271, 278, 327
FatI CATG 2 cut(s) 276, 325
FauNDI CATATG 1 cut(s) 269
Fnu4HI GCNGC 2 cut(s) 30, 339
FokI GGATG 5 cut(s) 117, 122, 317, 373, 397
Fsp4HI GCNGC 2 cut(s) 30, 339
FspBI CTAG 1 cut(s) 119
GlaI GCGC 1 cut(s) 342
GluI GCNGC 2 cut(s) 30, 339
HapII CCGG 1 cut(s) 219
HgaI GACGC 1 cut(s) 297
HhaI GCGC 1 cut(s) 343
Hin1II CATG 2 cut(s) 280, 329
Hin6I GCGC 1 cut(s) 341
HinP1I GCGC 1 cut(s) 341
HinfI GANTC 2 cut(s) 196, 321
HpaII CCGG 1 cut(s) 219
HphI GGTGA 1 cut(s) 278
Hpy188I TCNGA 2 cut(s) 40, 201
Hpy188III TCNNGA 3 cut(s) 70, 107, 236
HpyAV CCTTC 1 cut(s) 250
HpyCH4V TGCA 3 cut(s) 32, 130, 378
HpyF10VI GCNNNNNNNGC 3 cut(s) 347, 419, 454
Hsp92II CATG 2 cut(s) 280, 329
HspAI GCGC 1 cut(s) 341
LmnI GCTCC 3 cut(s) 40, 273, 438
LpnPI CCDG 8 cut(s) 29, 83, 92, 102, 148, 232, 302, 320
Lsp1109I GCAGC 1 cut(s) 16
LweI GCATC 4 cut(s) 100, 139, 205, 295
MaeI CTAG 1 cut(s) 119
MboII GAAGA 1 cut(s) 265
MluCI AATT 1 cut(s) 33
MlyI GAGTC 2 cut(s) 205, 315
MnlI CCTC 2 cut(s) 65, 178
MseI TTAA 1 cut(s) 99
MslI CAYNNNNRTG 1 cut(s) 383
MspI CCGG 1 cut(s) 219
MwoI GCNNNNNNNGC 3 cut(s) 347, 419, 454
NdeI CATATG 1 cut(s) 269
NlaIII CATG 2 cut(s) 280, 329
NspI RCATGY 1 cut(s) 280
PkrI GCNGC 2 cut(s) 31, 340
PleI GAGTC 2 cut(s) 204, 315
PpsI GAGTC 2 cut(s) 204, 315
RsaI GTAC 2 cut(s) 167, 266
RsaNI GTAC 2 cut(s) 166, 265
RseI CAYNNNNRTG 1 cut(s) 383
SaqAI TTAA 1 cut(s) 99
SatI GCNGC 2 cut(s) 30, 339
SchI GAGTC 2 cut(s) 205, 315
SetI ASST 5 cut(s) 45, 159, 167, 294, 371
SfaNI GCATC 4 cut(s) 100, 139, 205, 295
SmiMI CAYNNNNRTG 1 cut(s) 383
Sse9I AATT 1 cut(s) 33
SsiI CCGC 1 cut(s) 338
SspMI CTAG 1 cut(s) 119
TaqI TCGA 3 cut(s) 213, 237, 251
TasI AATT 1 cut(s) 33
TatI WGTACW 1 cut(s) 264
TauI GCSGC 1 cut(s) 341
Tru1I TTAA 1 cut(s) 99
Tru9I TTAA 1 cut(s) 99
TseI GCWGC 1 cut(s) 29
XceI RCATGY 1 cut(s) 280
XspI CTAG 1 cut(s) 119
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.