Rh7DG158000
ERF Family

Belongs to the protein kinase superfamily

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7D
Physical Location & Seq
Forward (+)
13717861 .. 13718226
366 bp
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UTR
Exon/CDS
Intron
Rh7DG158000.1

Sequence Viewer

Length: 366 bp
ATGTGGAACCCCATCAAGTCTCGTTACACAAACCAACTTGTGGAGTTGGATGGAACTCTGAAACGGCTCTTGAAACAAGTGTTGATGCAGCAAGCGAGGGACATTAAGGAGAACTTGCTCGTGGCAAAAGAAACTGCGCAACAACTTGTCAAGATGCAAGAGTCCAATGAGATACTGTTGAAGGAACGGATGCTGCAGCAGGAAGTAGTGAGAGATTTGCAGGACAAGTTTGTTTCAGCACTCCAAAACAACGCGAAACAGCTTGTTCAATTACAGGAGGTGATAGAAGAAACGATGCGGCTGCACATAGCAAAGGAAGTCACTGATACCGGAACAAGTAACTTTCTCTTGGAAATATATATATAG

Protein Analysis

121

Amino Acids

14.18

Weight (kDa)

5.88

Isoelectric Point (pI)

44.41

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 138
AccB7I CCANNNNNTGG 1 cut(s) 40
AccII CGCG 1 cut(s) 254
AciI CCGC 1 cut(s) 298
AfiI CCNNNNNNNGG 1 cut(s) 40
AgsI TTSAA 3 cut(s) 73, 181, 269
AluBI AGCT 1 cut(s) 262
AluI AGCT 1 cut(s) 262
Alw26I GTCTC 1 cut(s) 24
ApeKI GCWGC 4 cut(s) 88, 193, 196, 301
AspLEI GCGC 1 cut(s) 139
AsuHPI GGTGA 1 cut(s) 292
BauI CACGAG 1 cut(s) 119
BbvI GCAGC 4 cut(s) 100, 180, 208, 288
BccI CCATC 2 cut(s) 20, 44
BceAI ACGGC 1 cut(s) 80
BcgI CGANNNNNNTGC 2 cut(s) 283, 317
BcoDI GTCTC 1 cut(s) 24
BfmI CTRYAG 1 cut(s) 194
BisI GCNGC 5 cut(s) 89, 194, 197, 299, 302
BlsI GCNGC 5 cut(s) 90, 195, 198, 300, 303
BmiI GGNNCC 1 cut(s) 8
BmsI GCATC 4 cut(s) 75, 144, 180, 285
BsaWI WCCGGW 1 cut(s) 329
Bsc4I CCNNNNNNNGG 1 cut(s) 40
BseGI GGATG 2 cut(s) 55, 195
BseLI CCNNNNNNNGG 1 cut(s) 40
BseXI GCAGC 4 cut(s) 100, 180, 208, 288
BsgI GTGCAG 1 cut(s) 287
Bsh1236I CGCG 1 cut(s) 254
BsiSI CCGG 1 cut(s) 330
BslFI GGGAC 1 cut(s) 113
BslI CCNNNNNNNGG 1 cut(s) 40
BsmAI GTCTC 1 cut(s) 24
BsmFI GGGAC 1 cut(s) 113
BspACI CCGC 1 cut(s) 298
BspFNI CGCG 1 cut(s) 254
BspLI GGNNCC 1 cut(s) 8
BspMAI CTGCAG 1 cut(s) 198
BssSI CACGAG 1 cut(s) 119
Bst2BI CACGAG 1 cut(s) 119
Bst4CI ACNGT 1 cut(s) 177
BstC8I GCNNGC 1 cut(s) 93
BstF5I GGATG 2 cut(s) 55, 195
BstFNI CGCG 1 cut(s) 254
BstHHI GCGC 1 cut(s) 139
BstMAI GTCTC 1 cut(s) 24
BstSFI CTRYAG 1 cut(s) 194
BstUI CGCG 1 cut(s) 254
BstV1I GCAGC 4 cut(s) 100, 180, 208, 288
BtsCI GGATG 2 cut(s) 55, 195
BtsIMutI CAGTG 1 cut(s) 321
Cac8I GCNNGC 1 cut(s) 93
CfoI GCGC 1 cut(s) 139
CviJI RGCY 3 cut(s) 67, 262, 301
CviKI_1 RGCY 3 cut(s) 67, 262, 301
FaiI YATR 5 cut(s) 308, 358, 360, 362, 364
FalI AAGNNNNNCTT 2 cut(s) 98, 130
FaqI GGGAC 1 cut(s) 113
Fnu4HI GCNGC 5 cut(s) 89, 194, 197, 299, 302
FokI GGATG 2 cut(s) 62, 202
Fsp4HI GCNGC 5 cut(s) 89, 194, 197, 299, 302
FspI TGCGCA 1 cut(s) 138
GlaI GCGC 1 cut(s) 138
GluI GCNGC 5 cut(s) 89, 194, 197, 299, 302
HapII CCGG 1 cut(s) 330
HhaI GCGC 1 cut(s) 139
Hin6I GCGC 1 cut(s) 137
HinP1I GCGC 1 cut(s) 137
HinfI GANTC 1 cut(s) 161
HpaII CCGG 1 cut(s) 330
HphI GGTGA 1 cut(s) 292
Hpy188I TCNGA 1 cut(s) 60
Hpy188III TCNNGA 2 cut(s) 70, 151
HpyAV CCTTC 1 cut(s) 175
HpyCH4III ACNGT 1 cut(s) 177
HpyCH4V TGCA 5 cut(s) 88, 157, 196, 220, 304
HspAI GCGC 1 cut(s) 137
LpnPI CCDG 4 cut(s) 185, 206, 260, 343
Lsp1109I GCAGC 4 cut(s) 100, 180, 208, 288
LweI GCATC 4 cut(s) 75, 144, 180, 285
MaeIII GTNAC 3 cut(s) 23, 319, 338
MboII GAAGA 1 cut(s) 299
MluCI AATT 1 cut(s) 269
MlyI GAGTC 1 cut(s) 170
MmeI TCCRAC 1 cut(s) 27
MnlI CCTC 2 cut(s) 90, 271
MseI TTAA 1 cut(s) 105
MspI CCGG 1 cut(s) 330
MvnI CGCG 1 cut(s) 254
NlaIV GGNNCC 1 cut(s) 8
NmuCI GTSAC 1 cut(s) 319
NsbI TGCGCA 1 cut(s) 138
PflMI CCANNNNNTGG 1 cut(s) 40
PkrI GCNGC 5 cut(s) 90, 195, 198, 300, 303
PleI GAGTC 1 cut(s) 169
PpsI GAGTC 1 cut(s) 169
PspN4I GGNNCC 1 cut(s) 8
PstI CTGCAG 1 cut(s) 198
SaqAI TTAA 1 cut(s) 105
SatI GCNGC 5 cut(s) 89, 194, 197, 299, 302
SchI GAGTC 1 cut(s) 170
SetI ASST 2 cut(s) 264, 282
SfaNI GCATC 4 cut(s) 75, 144, 180, 285
SfcI CTRYAG 1 cut(s) 194
Sse9I AATT 1 cut(s) 269
SsiI CCGC 1 cut(s) 298
TaaI ACNGT 1 cut(s) 177
TasI AATT 1 cut(s) 269
TauI GCSGC 1 cut(s) 301
Tru1I TTAA 1 cut(s) 105
Tru9I TTAA 1 cut(s) 105
TscAI CASTG 1 cut(s) 328
TseFI GTSAC 1 cut(s) 319
TseI GCWGC 4 cut(s) 88, 193, 196, 301
Tsp45I GTSAC 1 cut(s) 319
TspGWI ACGGA 1 cut(s) 202
TspRI CASTG 1 cut(s) 328
Van91I CCANNNNNTGG 1 cut(s) 40
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.