Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp07

Orthogroup ID

OG0002062

Physical Location & Seq

Genomic Coordinates Forward (+)

16157644 .. 16159143

Gene Structure 1500 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.7G149800.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1422 bp

ATGGCTAATGGAGGAAGAGATGCTGTCATTACAATTGCAGCGACGAACAATATTCAGACCACAATATCTTTGGAGCAAGGAATCCAGGAAACGAAATGGCTGCTGCACCCCGCAGCTGGAAACAGCTCTTGTTGCATCTTCAGATTACCCCAATACCTCTTGGAAATAAACAAGAAGGCCTACCAGCCCCATATAGTTTCCATCGGTCCTTATCACTACGGTGACACACATTTGGACATGATGCAGCAGCACAAATGGAGATTTCTTCGCGATCTGCTTGTTCGAACACCATCCCCTGGCCCGAATCTTGATGACTACCGGCAGGTTGTGGCATCAATGGAAGAAGATATAAGACGGTGCTACTCAGAGACAATCAATTTATGCGGTCAAGATCTAGTTGAGGTGATGGTGCTAGATGGTCTTTTCACTATTGAACTATTCTGCAAAGTTGGAAGGCTGTCACCAAGTGATCCAGATGACCCCATCTTCAACTTGGCATGGATATTCCCTAACCTCATACGAGATCTTCTTCGGTTGGAGAATCAAATTCCTTTCATTGTCCTTCAAACATTATTTGATAAATCAAAATCTTCAAGAGAAGATAGTAACTCATCCCTTGCACAACTTGCTTTGGAATTCTTTAGTTTCGCGGTAGAAAGACCAGATGAAGTCTTAAAGCAACATGTCAGTGTTGAAGCAAAACATCTACTTGATTTACTTCGCTTGAGTTTTATTCCTGAACCACATCACCGCTCACCTCAAAATCAAAACCCAAAAGTCATTCTTCCATTAGTCCAATTCATCCAAATGGCCAAAAAGCCTCTAGCGGGAATACTCAAGGCCACCACAAGGAACACACTAAAAAAGTTCCTTCATTTGGCTGGAATTAAGTTCAAGGAGAGGGAGGCAAATAGCTTCTTGGACATCAGATTTTGCAACGGGGTGCTCGAAATTCCGAACATAACGCTAGATGATCTACGCACTGATATTTTCCTCAACTTTGTTGCATTTGAACAATGCTACTCCCATTGCTCAAAGCACATAACCACTTATGCTGCATTGATGAGTTGCCTCATCAGCACGCCTGTGGACGCAGCATTTCTCAGTGACAAAAATATTATTGAGAATTATCTTGGAACCGATGAGGAGGTTGCTCATTTCTTCAAAAACCTTGGCAAGGATGTGCCTTTCGATATTGACGAAAGTTATCTATGTAAGTTGTTCAAGGATGTGAATGAGTACCATAGAAATATTTGGCACGTGAGATGGGCTGGTTTTAGATTTAAGTATTTTGACAACCCATGGTCTTTCTTGTCAGCTGTAGCTGCTGTCGTGCTCCTACTACTCACTGCAATTCAGACCTTCTTTACTGTGTATGATTATTTTAATTCATTGGCCTCTAATGGAGGGGGGAGGCATTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DUF247

Protein Analysis

474

Amino Acids

54.15

Weight (kDa)

6.15

Isoelectric Point (pI)

41.76

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0002062)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G44695 AT3G44700 AT3G44700 AT3G44710 AT5G22540 AT5G22550 AT5G22550 AT5G22560
fragaria_vesca	FvH4_1g12920 FvH4_1g13901 FvH4_1g13920
malus_domestica	MD02G1152400.v1.1 MD07G1114700.v1.1 MD07G1115000.v1.1 MD10G1144400.v1.1 MD10G1146500.v1.1
prunus_persica	Prupe.7G149800_v2.0.a1 Prupe.7G150000_v2.0.a1 Prupe.7G150500_v2.0.a1
pyrus_communis	pycom07g10000 pycom10g12420
rosa_chinensis	RchiOBHm_Chr2g0103321 RchiOBHm_Chr7g0226251
rosa_laevigata	RLG00000017223
rosa_multiflora	Rmu_sc0002435.1_g000011 Rmu_sc0006727.1_g000002 Rmu_sc0006743.1_g000002 Rmu_sc0006743.1_g000003 Rmu_sc0010053.1_g000005 Rmu_sc0025224.1_g000002
rosa_roxburghii	Rroxscaffold_2G00139740
rosa_rugosa	Rorug02G0105700 Rorug02G0105800 Rorug02G0105800 Rorug02G0113600 Rorug02G0113800 Rorug07G0236000
rosa_samantha	Rh2BG169200 Rh2CG169100 Rh2DG168000 Rh3BG095300
rosa_wichuraiana	Rw0G019400 Rw2G012010 Rw2G012730

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	313
AccB7I	CCANNNNNTGG	1 cut(s)	296
AccBSI	CCGCTC	1 cut(s)	753
AccII	CGCG	2 cut(s)	270, 650
AciI	CCGC	5 cut(s)	111, 384, 650, 751, 827
AclWI	GGATC	1 cut(s)	464
AcoI	YGGCCR	1 cut(s)	810
AcsI	RAATTY	3 cut(s)	546, 635, 951
AcuI	CTGAAG	1 cut(s)	124
AcvI	CACGTG	1 cut(s)	1261
AdeI	CACNNNGTG	1 cut(s)	467
AfaI	GTAC	1 cut(s)	1241
AfiI	CCNNNNNNNGG	6 cut(s)	116, 296, 827, 849, 877, 1177
AflIII	ACRYGT	1 cut(s)	682
AgsI	TTSAA	9 cut(s)	434, 490, 566, 594, 695, 895, 1013, 1165, 1225
AjnI	CCWGG	2 cut(s)	84, 295
AleI	CACNNNNGTG	2 cut(s)	219, 1085
AluBI	AGCT	5 cut(s)	116, 126, 915, 1319, 1325
AluI	AGCT	5 cut(s)	116, 126, 915, 1319, 1325
Alw21I	GWGCWC	2 cut(s)	948, 1338
Alw26I	GTCTC	1 cut(s)	362
AlwI	GGATC	1 cut(s)	464
AoxI	GGCC	5 cut(s)	177, 298, 810, 840, 1395
ApeKI	GCWGC	9 cut(s)	38, 100, 103, 113, 244, 247, 1055, 1094, 1325
ApoI	RAATTY	3 cut(s)	546, 635, 951
AspS9I	GGNCC	2 cut(s)	206, 299
AsuHPI	GGTGA	5 cut(s)	233, 415, 453, 740, 747
AsuII	TTCGAA	1 cut(s)	283
AvaII	GGWCC	1 cut(s)	206
BalI	TGGCCA	1 cut(s)	812
BbrPI	CACGTG	1 cut(s)	1261
Bbv12I	GWGCWC	2 cut(s)	948, 1338
BbvI	GCAGC	9 cut(s)	50, 87, 90, 125, 256, 259, 1042, 1106, 1312
BccI	CCATC	6 cut(s)	209, 298, 400, 410, 491, 1260
BcgI	CGANNNNNNTGC	2 cut(s)	82, 116
BciT130I	CCWGG	2 cut(s)	86, 297
BcoDI	GTCTC	1 cut(s)	362
BfaI	CTAG	4 cut(s)	395, 413, 824, 968
BfmI	CTRYAG	1 cut(s)	1320
BfuAI	ACCTGC	1 cut(s)	313
BglII	AGATCT	2 cut(s)	391, 523
BisI	GCNGC	9 cut(s)	39, 101, 104, 114, 245, 248, 1056, 1095, 1326
BlsI	GCNGC	9 cut(s)	40, 102, 105, 115, 246, 249, 1057, 1096, 1327
Bme1390I	CCNGG	2 cut(s)	86, 297
Bme18I	GGWCC	1 cut(s)	206
BmgT120I	GGNCC	2 cut(s)	206, 299
BmiI	GGNNCC	1 cut(s)	1138
BmrFI	CCNGG	2 cut(s)	86, 297
BmsI	GCATC	4 cut(s)	10, 144, 231, 341
Bpu14I	TTCGAA	1 cut(s)	283
BpuEI	CTTGAG	2 cut(s)	745, 821
BsaAI	YACGTR	1 cut(s)	1261
BsaJI	CCNNGG	3 cut(s)	295, 1171, 1301
Bsc4I	CCNNNNNNNGG	6 cut(s)	116, 296, 827, 849, 877, 1177
Bse118I	RCCGGY	1 cut(s)	318
Bse3DI	GCAATG	1 cut(s)	1027
BseBI	CCWGG	2 cut(s)	86, 297
BseDI	CCNNGG	3 cut(s)	295, 1171, 1301
BseGI	GGATG	5 cut(s)	290, 611, 801, 1186, 1234
BseLI	CCNNNNNNNGG	6 cut(s)	116, 296, 827, 849, 877, 1177
BseMI	GCAATG	1 cut(s)	1027
BseMII	CTCAG	2 cut(s)	378, 1117
BseRI	GAGGAG	1 cut(s)	1160
BseXI	GCAGC	9 cut(s)	50, 87, 90, 125, 256, 259, 1042, 1106, 1312
BsgI	GTGCAG	1 cut(s)	89
Bsh1236I	CGCG	2 cut(s)	270, 650
BshFI	GGCC	5 cut(s)	179, 300, 812, 842, 1397
BsiHKAI	GWGCWC	2 cut(s)	948, 1338
BsiSI	CCGG	1 cut(s)	319
BslI	CCNNNNNNNGG	6 cut(s)	116, 296, 827, 849, 877, 1177
BsmAI	GTCTC	1 cut(s)	362
BsnI	GGCC	5 cut(s)	179, 300, 812, 842, 1397
Bsp119I	TTCGAA	1 cut(s)	283
Bsp1286I	GDGCHC	2 cut(s)	948, 1338
Bsp143I	GATC	5 cut(s)	271, 391, 469, 523, 973
Bsp19I	CCATGG	1 cut(s)	1301
Bsp68I	TCGCGA	1 cut(s)	270
BspACI	CCGC	5 cut(s)	111, 384, 650, 751, 827
BspANI	GGCC	5 cut(s)	179, 300, 812, 842, 1397
BspCNI	CTCAG	2 cut(s)	377, 1116
BspFNI	CGCG	2 cut(s)	270, 650
BspLI	GGNNCC	1 cut(s)	1138
BspMI	ACCTGC	1 cut(s)	313
BspPI	GGATC	1 cut(s)	464
BspT104I	TTCGAA	1 cut(s)	283
BsrBI	CCGCTC	1 cut(s)	753
BsrDI	GCAATG	1 cut(s)	1027
BsrFI	RCCGGY	1 cut(s)	318
BssAI	RCCGGY	1 cut(s)	318
BssECI	CCNNGG	3 cut(s)	295, 1171, 1301
BssMI	GATC	5 cut(s)	271, 391, 469, 523, 973
BssT1I	CCWWGG	2 cut(s)	1171, 1301
Bst2UI	CCWGG	2 cut(s)	86, 297
Bst4CI	ACNGT	3 cut(s)	221, 357, 1372
Bst6I	CTCTTC	1 cut(s)	10
BstAPI	GCANNNNNTGC	1 cut(s)	626
BstBAI	YACGTR	1 cut(s)	1261
BstBI	TTCGAA	1 cut(s)	283
BstC8I	GCNNGC	1 cut(s)	1082
BstDEI	CTNAG	2 cut(s)	364, 1103
BstDSI	CCRYGG	1 cut(s)	1301
BstENI	CCTNNNNNAGG	1 cut(s)	1175
BstF5I	GGATG	5 cut(s)	290, 611, 801, 1186, 1234
BstFNI	CGCG	2 cut(s)	270, 650
BstKTI	GATC	5 cut(s)	274, 394, 472, 526, 976
BstMAI	GTCTC	1 cut(s)	362
BstMBI	GATC	5 cut(s)	271, 391, 469, 523, 973
BstMWI	GCNNNNNNNGC	4 cut(s)	132, 626, 1077, 1325
BstNI	CCWGG	2 cut(s)	86, 297
BstNSI	RCATGY	1 cut(s)	686
BstSCI	CCNGG	2 cut(s)	84, 295
BstSFI	CTRYAG	1 cut(s)	1320
BstUI	CGCG	2 cut(s)	270, 650
BstV1I	GCAGC	9 cut(s)	50, 87, 90, 125, 256, 259, 1042, 1106, 1312
BstX2I	RGATCY	2 cut(s)	391, 523
BstYI	RGATCY	2 cut(s)	391, 523
BsuRI	GGCC	5 cut(s)	179, 300, 812, 842, 1397
BtgI	CCRYGG	1 cut(s)	1301
BtsCI	GGATG	5 cut(s)	290, 611, 801, 1186, 1234
BtsI	GCAGTG	1 cut(s)	1347
BtsIMutI	CAGTG	4 cut(s)	694, 981, 1111, 1347
BtuMI	TCGCGA	1 cut(s)	270
BveI	ACCTGC	1 cut(s)	313
Cac8I	GCNNGC	1 cut(s)	1082
Cfr10I	RCCGGY	1 cut(s)	318
Cfr13I	GGNCC	2 cut(s)	206, 299
CseI	GACGC	1 cut(s)	1100
Csp6I	GTAC	1 cut(s)	1240
CviAII	CATG	4 cut(s)	238, 498, 683, 1302
CviQI	GTAC	1 cut(s)	1240
DdeI	CTNAG	2 cut(s)	364, 1103
DpnI	GATC	5 cut(s)	273, 393, 471, 525, 975
DpnII	GATC	5 cut(s)	271, 391, 469, 523, 973
DraIII	CACNNNGTG	1 cut(s)	467
EaeI	YGGCCR	1 cut(s)	810
Eam1104I	CTCTTC	1 cut(s)	10
EarI	CTCTTC	1 cut(s)	10
Eco130I	CCWWGG	2 cut(s)	1171, 1301
Eco147I	AGGCCT	1 cut(s)	179
Eco47I	GGWCC	1 cut(s)	206
Eco57I	CTGAAG	1 cut(s)	124
Eco72I	CACGTG	1 cut(s)	1261
EcoNI	CCTNNNNNAGG	1 cut(s)	1175
EcoRI	GAATTC	1 cut(s)	635
EcoRII	CCWGG	2 cut(s)	84, 295
EcoT14I	CCWWGG	2 cut(s)	1171, 1301
ErhI	CCWWGG	2 cut(s)	1171, 1301
FaeI	CATG	4 cut(s)	241, 501, 686, 1305
FalI	AAGNNNNNCTT	2 cut(s)	768, 800
FatI	CATG	4 cut(s)	237, 497, 682, 1301
FauI	CCCGC	2 cut(s)	118, 820
Fnu4HI	GCNGC	9 cut(s)	39, 101, 104, 114, 245, 248, 1056, 1095, 1326
FokI	GGATG	5 cut(s)	277, 598, 788, 1193, 1241
Fsp4HI	GCNGC	9 cut(s)	39, 101, 104, 114, 245, 248, 1056, 1095, 1326
FspBI	CTAG	4 cut(s)	395, 413, 824, 968
GluI	GCNGC	9 cut(s)	39, 101, 104, 114, 245, 248, 1056, 1095, 1326
HaeIII	GGCC	5 cut(s)	179, 300, 812, 842, 1397
HapII	CCGG	1 cut(s)	319
HgaI	GACGC	1 cut(s)	1100
Hin1II	CATG	4 cut(s)	241, 501, 686, 1305
HinfI	GANTC	3 cut(s)	81, 304, 541
HpaII	CCGG	1 cut(s)	319
HphI	GGTGA	5 cut(s)	233, 415, 453, 740, 747
Hpy166II	GTNNAC	1 cut(s)	1090
Hpy188I	TCNGA	6 cut(s)	57, 143, 367, 929, 957, 1359
Hpy188III	TCNNGA	6 cut(s)	269, 308, 389, 473, 594, 737
Hpy8I	GTNNAC	1 cut(s)	1090
Hpy99I	CGWCG	1 cut(s)	46
HpyAV	CCTTC	5 cut(s)	169, 447, 572, 881, 1372
HpyCH4III	ACNGT	3 cut(s)	221, 357, 1372
HpyCH4IV	ACGT	1 cut(s)	1260
HpyF10VI	GCNNNNNNNGC	4 cut(s)	132, 626, 1077, 1325
HpyF3I	CTNAG	2 cut(s)	364, 1103
HpySE526I	ACGT	1 cut(s)	1260
Hsp92II	CATG	4 cut(s)	241, 501, 686, 1305
Kzo9I	GATC	5 cut(s)	271, 391, 469, 523, 973
LmnI	GCTCC	2 cut(s)	73, 1341
Lsp1109I	GCAGC	9 cut(s)	50, 87, 90, 125, 256, 259, 1042, 1106, 1312
LweI	GCATC	4 cut(s)	10, 144, 231, 341
MaeI	CTAG	4 cut(s)	395, 413, 824, 968
MaeII	ACGT	1 cut(s)	1260
MaeIII	GTNAC	4 cut(s)	221, 459, 605, 1106
MalI	GATC	5 cut(s)	273, 393, 471, 525, 975
MbiI	CCGCTC	1 cut(s)	753
MboI	GATC	5 cut(s)	271, 391, 469, 523, 973
MfeI	CAATTG	1 cut(s)	33
MflI	RGATCY	2 cut(s)	391, 523
MhlI	GDGCHC	2 cut(s)	948, 1338
MlsI	TGGCCA	1 cut(s)	812
MluNI	TGGCCA	1 cut(s)	812
MmeI	TCCRAC	2 cut(s)	430, 516
Mox20I	TGGCCA	1 cut(s)	812
MscI	TGGCCA	1 cut(s)	812
MseI	TTAA	4 cut(s)	674, 888, 1284, 1386
MslI	CAYNNNNRTG	4 cut(s)	219, 687, 806, 1085
Msp20I	TGGCCA	1 cut(s)	812
MspA1I	CMGCKG	2 cut(s)	116, 1319
MspI	CCGG	1 cut(s)	319
MspR9I	CCNGG	2 cut(s)	86, 297
MunI	CAATTG	1 cut(s)	33
MvaI	CCWGG	2 cut(s)	86, 297
MvnI	CGCG	2 cut(s)	270, 650
MwoI	GCNNNNNNNGC	4 cut(s)	132, 626, 1077, 1325
NcoI	CCATGG	1 cut(s)	1301
NdeII	GATC	5 cut(s)	271, 391, 469, 523, 973
NlaIII	CATG	4 cut(s)	241, 501, 686, 1305
NlaIV	GGNNCC	1 cut(s)	1138
NmuCI	GTSAC	3 cut(s)	221, 459, 1106
NruI	TCGCGA	1 cut(s)	270
NspI	RCATGY	1 cut(s)	686
NspV	TTCGAA	1 cut(s)	283
OliI	CACNNNNGTG	2 cut(s)	219, 1085
PceI	AGGCCT	1 cut(s)	179
PciI	ACATGT	1 cut(s)	682
PcsI	WCGNNNNNNNCGW	2 cut(s)	945, 1197
PfeI	GAWTC	3 cut(s)	81, 304, 541
PflMI	CCANNNNNTGG	1 cut(s)	296
PfoI	TCCNGGA	1 cut(s)	84
PkrI	GCNGC	9 cut(s)	40, 102, 105, 115, 246, 249, 1057, 1096, 1327
PmaCI	CACGTG	1 cut(s)	1261
PmlI	CACGTG	1 cut(s)	1261
Ppu21I	YACGTR	1 cut(s)	1261
PscI	ACATGT	1 cut(s)	682
Psp6I	CCWGG	2 cut(s)	84, 295
PspCI	CACGTG	1 cut(s)	1261
PspGI	CCWGG	2 cut(s)	84, 295
PspN4I	GGNNCC	1 cut(s)	1138
PspPI	GGNCC	2 cut(s)	206, 299
PsuI	RGATCY	2 cut(s)	391, 523
PvuII	CAGCTG	2 cut(s)	116, 1319
RruI	TCGCGA	1 cut(s)	270
RsaI	GTAC	1 cut(s)	1241
RsaNI	GTAC	1 cut(s)	1240
RseI	CAYNNNNRTG	4 cut(s)	219, 687, 806, 1085
SaqAI	TTAA	4 cut(s)	674, 888, 1284, 1386
SatI	GCNGC	9 cut(s)	39, 101, 104, 114, 245, 248, 1056, 1095, 1326
Sau3AI	GATC	5 cut(s)	271, 391, 469, 523, 973
Sau96I	GGNCC	2 cut(s)	206, 299
ScrFI	CCNGG	2 cut(s)	86, 297
SduI	GDGCHC	2 cut(s)	948, 1338
SfaNI	GCATC	4 cut(s)	10, 144, 231, 341
SfcI	CTRYAG	1 cut(s)	1320
SfuI	TTCGAA	1 cut(s)	283
SinI	GGWCC	1 cut(s)	206
SmiMI	CAYNNNNRTG	4 cut(s)	219, 687, 806, 1085
SmlI	CTYRAG	2 cut(s)	724, 836
SmoI	CTYRAG	2 cut(s)	724, 836
SseBI	AGGCCT	1 cut(s)	179
SsiI	CCGC	5 cut(s)	111, 384, 650, 751, 827
SspI	AATATT	3 cut(s)	52, 1117, 1252
SspMI	CTAG	4 cut(s)	395, 413, 824, 968
StuI	AGGCCT	1 cut(s)	179
StyD4I	CCNGG	2 cut(s)	84, 295
StyI	CCWWGG	2 cut(s)	1171, 1301
TaaI	ACNGT	3 cut(s)	221, 357, 1372
TaiI	ACGT	1 cut(s)	1263
TaqI	TCGA	3 cut(s)	283, 948, 1191
TaqII	GACCGA	1 cut(s)	194
TfiI	GAWTC	3 cut(s)	81, 304, 541
Tru1I	TTAA	4 cut(s)	674, 888, 1284, 1386
Tru9I	TTAA	4 cut(s)	674, 888, 1284, 1386
TscAI	CASTG	4 cut(s)	694, 988, 1111, 1354
TseFI	GTSAC	3 cut(s)	221, 459, 1106
TseI	GCWGC	9 cut(s)	38, 100, 103, 113, 244, 247, 1055, 1094, 1325
Tsp45I	GTSAC	3 cut(s)	221, 459, 1106
TspDTI	ATGAA	5 cut(s)	544, 681, 790, 863, 1380
TspRI	CASTG	4 cut(s)	694, 988, 1111, 1354
Van91I	CCANNNNNTGG	1 cut(s)	296
VpaK11BI	GGWCC	1 cut(s)	206
XagI	CCTNNNNNAGG	1 cut(s)	1175
XapI	RAATTY	3 cut(s)	546, 635, 951
XceI	RCATGY	1 cut(s)	686
XcmI	CCANNNNNNNNNTGG	2 cut(s)	67, 490
XspI	CTAG	4 cut(s)	395, 413, 824, 968

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.