Prupe.8G228200_v2.0.a1

F-box kelch-repeat protein

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp08
Physical Location & Seq
Forward (+)
20436228 .. 20440444
4217 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.8G228200.3

Sequence Viewer

Length: 1287 bp
ATGATCCAACCCACACCTTCATCTCCTTCTTCATCTTCATCTTCTTCATCGCCATCTTCACCACAATTGATGCAGATCTACGAAAGCGTAACCCTAATTCCCGGTCTCCCAAACGACGTCGCAGCACTCATTCTCTCCTTCATCCCCTACTCCCACCAAGCCCGCCTCAAACCAACCTGCAAATCATGGAAGCTCTTCCTCTCCTCCAAAACCCTAATCGCTCTCCGCCAAACCCACCGTAACCTCTCTCACCTCCTCTGTATCTTCCCCCAAGACCCCTCCGTAGCCTCTCCTTATCTCTTCGACCCCCAAAACCTAGCCTGGTGCCCCCTTCCCCCCATGCCTTGTAACCCCCACGTCTATGGCCTCTGCAACTTCACATCCCTCTCCATTGGCCCCCACCTCTACGTCATCGGCGGTTCGCTCTTCGACACTCGCTCGTTCCCGATTGACCGTCCCTCGCCGTCCTCCGCTGTCTTCCGATTCGATTTCAACACTTCCTCGTGGGACTTCCTCGCCCCGATGCTCACGCCACGTGGCAGCTTCGCCTGCGCCGCGGTTCCGAGCTCCGGAGAGATTCTCGTCGCTGGCGGTGGCTCTCGTCACACGCTGTTCAGCGCCGCTGGAAGCCGAATGACCTCGGTGGAGCGATATGACATCGGTAGAAATGAATGGGTTGCCATGGACGGGTTGCCGGGTTTTCGGGCCGGGTGCGCGGGGTTCTTTGTTGGGGAAGGGGAGGAGAGGGAGTTCTGGGTGATGGGTGGGTACGGCGAGTCTAGGACGATATCAGGAGTTTTTCCAATAGACGAGTATTACAGAGACGCCGTGGTGATGGAATTGAAGAATGGGAATAGTGGTGGCAGGTGGAGGGAGCTTGGGGATATGTGGGAAGAAGGCGAAAGGGTGAGGCTCGGCAAAGTTGTCGTAATCGAAGATGGTGATGATCGTGGACGCCCTGCTGTTTTCATGCTTGATGGGAATGATATATTCAGGTATAACATGGCTTCAAATCGCTGGTTTAAGGAGTCACGTATACCAAGAAAGGCTCCGTGCAACTCATTATTTGGATTTGTTGTATTGGACGGAGAGCTGCATGCAATCACCCTTTTGAAGGCGGTTGAGACAACAGAAACCCGAAGGTCGCGACTGCATAAGAGGGCGGGAACGCTGTACATCCAAATCTACAATCCTAAGAAGAAGACATGGAGATCTCTCATTACGAAGTCGCCTTTCCATTACAGCTTGGATTTCAATACTGCAGTTATGAGCACCATTCGCTTGTGA
Functional Annotation
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

429

Amino Acids

47.68

Weight (kDa)

8.84

Isoelectric Point (pI)

49.31

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 855
AatII GACGTC 1 cut(s) 120
Acc36I ACCTGC 2 cut(s) 185, 855
AccB1I GGYRCC 1 cut(s) 324
AccI GTMKAC 1 cut(s) 1036
AccII CGCG 3 cut(s) 557, 716, 1147
AccIII TCCGGA 1 cut(s) 569
AcvI CACGTG 1 cut(s) 536
AcyI GRCGYC 3 cut(s) 117, 825, 955
AfaI GTAC 2 cut(s) 770, 1175
AfiI CCNNNNNNNGG 3 cut(s) 569, 687, 1114
AgsI TTSAA 5 cut(s) 493, 844, 1011, 1114, 1255
AjiI CACGTC 1 cut(s) 358
AjnI CCWGG 1 cut(s) 320
AloI GAACNNNNNNTCC 2 cut(s) 734, 766
AluBI AGCT 6 cut(s) 193, 543, 567, 877, 1093, 1245
AluI AGCT 6 cut(s) 193, 543, 567, 877, 1093, 1245
Alw21I GWGCWC 2 cut(s) 569, 1274
Alw26I GTCTC 3 cut(s) 110, 816, 1118
Aor13HI TCCGGA 1 cut(s) 569
AoxI GGCC 3 cut(s) 364, 394, 705
ApeKI GCWGC 3 cut(s) 122, 540, 1093
Asp700I GAANNNNTTC 1 cut(s) 194
AspLEI GCGC 3 cut(s) 554, 620, 716
AspS9I GGNCC 2 cut(s) 395, 705
AsuC2I CCSGG 3 cut(s) 102, 696, 709
AsuHPI GGTGA 7 cut(s) 51, 242, 769, 844, 919, 953, 1096
BaeGI GKGCMC 1 cut(s) 329
BanI GGYRCC 1 cut(s) 324
BanII GRGCYC 1 cut(s) 569
BauI CACGAG 1 cut(s) 502
BbrPI CACGTG 1 cut(s) 536
BbsI GAAGAC 2 cut(s) 469, 1208
Bbv12I GWGCWC 2 cut(s) 569, 1274
BbvI GCAGC 3 cut(s) 134, 552, 1080
BccI CCATC 5 cut(s) 61, 754, 829, 932, 971
BceAI ACGGC 3 cut(s) 448, 787, 812
BcgI CGANNNNNNTGC 2 cut(s) 907, 941
BciT130I CCWGG 1 cut(s) 322
BcnI CCSGG 3 cut(s) 102, 696, 709
BcoDI GTCTC 3 cut(s) 110, 816, 1118
BfaI CTAG 2 cut(s) 317, 780
BfmI CTRYAG 1 cut(s) 1260
BfoI RGCGCY 1 cut(s) 621
BfuAI ACCTGC 2 cut(s) 185, 855
BglII AGATCT 2 cut(s) 75, 1211
BisI GCNGC 5 cut(s) 123, 541, 555, 621, 1094
BlsI GCNGC 5 cut(s) 124, 542, 556, 622, 1095
Bme1390I CCNGG 4 cut(s) 102, 322, 696, 709
BmgBI CACGTC 1 cut(s) 358
BmgT120I GGNCC 2 cut(s) 395, 705
BmiI GGNNCC 4 cut(s) 326, 397, 561, 1050
BmrFI CCNGG 4 cut(s) 102, 322, 696, 709
BmsI GCATC 2 cut(s) 60, 513
BpiI GAAGAC 2 cut(s) 469, 1208
BplI GAGNNNNNCTC 2 cut(s) 564, 596
BpuMI CCSGG 3 cut(s) 102, 696, 709
BsaAI YACGTR 2 cut(s) 536, 1034
BsaBI GATNNNNATC 1 cut(s) 74
BsaHI GRCGYC 3 cut(s) 117, 825, 955
BsaI GGTCTC 1 cut(s) 110
BsaJI CCNNGG 4 cut(s) 555, 639, 681, 828
BsaWI WCCGGW 1 cut(s) 569
BsaXI ACNNNNNCTCC 2 cut(s) 734, 764
Bsc4I CCNNNNNNNGG 3 cut(s) 569, 687, 1114
Bse8I GATNNNNATC 1 cut(s) 74
BseAI TCCGGA 1 cut(s) 569
BseBI CCWGG 1 cut(s) 322
BseDI CCNNGG 4 cut(s) 555, 639, 681, 828
BseGI GGATG 3 cut(s) 141, 380, 1176
BseJI GATNNNNATC 1 cut(s) 74
BseLI CCNNNNNNNGG 3 cut(s) 569, 687, 1114
BseRI GAGGAG 3 cut(s) 193, 245, 755
BseSI GKGCMC 1 cut(s) 329
BseXI GCAGC 3 cut(s) 134, 552, 1080
Bsh1236I CGCG 3 cut(s) 557, 716, 1147
BshFI GGCC 3 cut(s) 366, 396, 707
BshNI GGYRCC 1 cut(s) 324
BsiHKAI GWGCWC 2 cut(s) 569, 1274
BsiSI CCGG 4 cut(s) 102, 570, 695, 708
BslFI GGGAC 2 cut(s) 441, 521
BslI CCNNNNNNNGG 3 cut(s) 569, 687, 1114
BsmAI GTCTC 3 cut(s) 110, 816, 1118
BsmBI CGTCTC 1 cut(s) 816
BsmFI GGGAC 2 cut(s) 441, 521
BsnI GGCC 3 cut(s) 366, 396, 707
Bso31I GGTCTC 1 cut(s) 110
Bsp1286I GDGCHC 3 cut(s) 329, 569, 1274
Bsp13I TCCGGA 1 cut(s) 569
Bsp1407I TGTACA 1 cut(s) 1173
Bsp143I GATC 4 cut(s) 3, 75, 946, 1211
Bsp19I CCATGG 1 cut(s) 681
Bsp68I TCGCGA 1 cut(s) 1147
BspANI GGCC 3 cut(s) 366, 396, 707
BspEI TCCGGA 1 cut(s) 569
BspFNI CGCG 3 cut(s) 557, 716, 1147
BspLI GGNNCC 4 cut(s) 326, 397, 561, 1050
BspMAI CTGCAG 1 cut(s) 1264
BspMI ACCTGC 2 cut(s) 185, 855
BspQI GCTCTTC 2 cut(s) 200, 431
BspT107I GGYRCC 1 cut(s) 324
BspTNI GGTCTC 1 cut(s) 110
BsrGI TGTACA 1 cut(s) 1173
BssECI CCNNGG 4 cut(s) 555, 639, 681, 828
BssMI GATC 4 cut(s) 3, 75, 946, 1211
BssNAI GTATAC 1 cut(s) 1037
BssNI GRCGYC 3 cut(s) 117, 825, 955
BssSI CACGAG 1 cut(s) 502
BssT1I CCWWGG 1 cut(s) 681
Bst1107I GTATAC 1 cut(s) 1037
Bst2BI CACGAG 1 cut(s) 502
Bst2UI CCWGG 1 cut(s) 322
Bst4CI ACNGT 2 cut(s) 239, 455
Bst6I CTCTTC 3 cut(s) 200, 305, 431
BstACI GRCGYC 3 cut(s) 117, 825, 955
BstAUI TGTACA 1 cut(s) 1173
BstBAI YACGTR 2 cut(s) 536, 1034
BstC8I GCNNGC 4 cut(s) 163, 550, 589, 1098
BstDEI CTNAG 1 cut(s) 1194
BstDSI CCRYGG 3 cut(s) 555, 681, 828
BstENI CCTNNNNNAGG 1 cut(s) 1112
BstF5I GGATG 3 cut(s) 141, 380, 1176
BstFNI CGCG 3 cut(s) 557, 716, 1147
BstH2I RGCGCY 1 cut(s) 621
BstHHI GCGC 3 cut(s) 554, 620, 716
BstKTI GATC 4 cut(s) 6, 78, 949, 1214
BstMAI GTCTC 3 cut(s) 110, 816, 1118
BstMBI GATC 4 cut(s) 3, 75, 946, 1211
BstMWI GCNNNNNNNGC 4 cut(s) 549, 554, 713, 1278
BstNI CCWGG 1 cut(s) 322
BstNSI RCATGY 1 cut(s) 1100
BstSCI CCNGG 4 cut(s) 100, 320, 694, 707
BstSFI CTRYAG 1 cut(s) 1260
BstSLI GKGCMC 1 cut(s) 329
BstUI CGCG 3 cut(s) 557, 716, 1147
BstV1I GCAGC 3 cut(s) 134, 552, 1080
BstV2I GAAGAC 2 cut(s) 469, 1208
BstX2I RGATCY 2 cut(s) 75, 1211
BstXI CCANNNNNNTGG 1 cut(s) 362
BstYI RGATCY 2 cut(s) 75, 1211
BstZ17I GTATAC 1 cut(s) 1037
BsuRI GGCC 3 cut(s) 366, 396, 707
BtgI CCRYGG 3 cut(s) 555, 681, 828
BtgZI GCGATG 1 cut(s) 33
BtrI CACGTC 1 cut(s) 358
BtsCI GGATG 3 cut(s) 141, 380, 1176
BtuMI TCGCGA 1 cut(s) 1147
BveI ACCTGC 2 cut(s) 185, 855
Cac8I GCNNGC 4 cut(s) 163, 550, 589, 1098
CfoI GCGC 3 cut(s) 554, 620, 716
Cfr13I GGNCC 2 cut(s) 395, 705
Cfr42I CCGCGG 1 cut(s) 558
CseI GACGC 2 cut(s) 833, 963
Csp6I GTAC 2 cut(s) 769, 1174
CviAII CATG 7 cut(s) 186, 340, 682, 970, 1003, 1097, 1206
CviQI GTAC 2 cut(s) 769, 1174
DdeI CTNAG 1 cut(s) 1194
DpnI GATC 4 cut(s) 5, 77, 948, 1213
DpnII GATC 4 cut(s) 3, 75, 946, 1211
Eam1104I CTCTTC 3 cut(s) 200, 305, 431
EarI CTCTTC 3 cut(s) 200, 305, 431
EciI GGCGGA 1 cut(s) 215
Ecl136II GAGCTC 1 cut(s) 567
Eco130I CCWWGG 1 cut(s) 681
Eco24I GRGCYC 1 cut(s) 569
Eco31I GGTCTC 1 cut(s) 110
Eco32I GATATC 1 cut(s) 789
Eco53kI GAGCTC 1 cut(s) 567
Eco72I CACGTG 1 cut(s) 536
EcoICRI GAGCTC 1 cut(s) 567
EcoNI CCTNNNNNAGG 1 cut(s) 1112
EcoRII CCWGG 1 cut(s) 320
EcoRV GATATC 1 cut(s) 789
EcoT14I CCWWGG 1 cut(s) 681
EcoT38I GRGCYC 1 cut(s) 569
ErhI CCWWGG 1 cut(s) 681
Esp3I CGTCTC 1 cut(s) 816
FaeI CATG 7 cut(s) 189, 343, 685, 973, 1006, 1100, 1209
FaqI GGGAC 2 cut(s) 441, 521
FatI CATG 7 cut(s) 185, 339, 681, 969, 1002, 1096, 1205
FauI CCCGC 3 cut(s) 170, 709, 1156
FblI GTMKAC 1 cut(s) 1036
Fnu4HI GCNGC 5 cut(s) 123, 541, 555, 621, 1094
FokI GGATG 3 cut(s) 128, 367, 1163
FriOI GRGCYC 1 cut(s) 569
Fsp4HI GCNGC 5 cut(s) 123, 541, 555, 621, 1094
FspBI CTAG 2 cut(s) 317, 780
GlaI GCGC 3 cut(s) 553, 619, 715
GluI GCNGC 5 cut(s) 123, 541, 555, 621, 1094
HaeII RGCGCY 1 cut(s) 621
HaeIII GGCC 3 cut(s) 366, 396, 707
HapII CCGG 4 cut(s) 102, 570, 695, 708
HgaI GACGC 2 cut(s) 833, 963
HhaI GCGC 3 cut(s) 554, 620, 716
Hin1I GRCGYC 3 cut(s) 117, 825, 955
Hin1II CATG 7 cut(s) 189, 343, 685, 973, 1006, 1100, 1209
Hin6I GCGC 3 cut(s) 552, 618, 714
HinP1I GCGC 3 cut(s) 552, 618, 714
HinfI GANTC 4 cut(s) 483, 577, 776, 1028
HpaII CCGG 4 cut(s) 102, 570, 695, 708
HphI GGTGA 7 cut(s) 51, 242, 769, 844, 919, 953, 1096
Hpy166II GTNNAC 2 cut(s) 953, 1037
Hpy188I TCNGA 2 cut(s) 482, 564
Hpy188III TCNNGA 4 cut(s) 445, 570, 792, 1146
Hpy8I GTNNAC 2 cut(s) 953, 1037
Hpy99I CGWCG 3 cut(s) 119, 122, 587
HpyAV CCTTC 8 cut(s) 27, 36, 148, 341, 728, 890, 1108, 1134
HpyCH4III ACNGT 2 cut(s) 239, 455
HpyCH4IV ACGT 5 cut(s) 117, 357, 408, 535, 1033
HpyCH4V TGCA 8 cut(s) 73, 180, 372, 1056, 1096, 1100, 1153, 1262
HpyF10VI GCNNNNNNNGC 4 cut(s) 549, 554, 713, 1278
HpyF3I CTNAG 1 cut(s) 1194
HpySE526I ACGT 5 cut(s) 117, 357, 408, 535, 1033
Hsp92I GRCGYC 3 cut(s) 117, 825, 955
Hsp92II CATG 7 cut(s) 189, 343, 685, 973, 1006, 1100, 1209
HspAI GCGC 3 cut(s) 552, 618, 714
Kpn2I TCCGGA 1 cut(s) 569
KspI CCGCGG 1 cut(s) 558
Kzo9I GATC 4 cut(s) 3, 75, 946, 1211
LguI GCTCTTC 2 cut(s) 200, 431
LmnI GCTCC 4 cut(s) 572, 646, 874, 1054
Lsp1109I GCAGC 3 cut(s) 134, 552, 1080
LweI GCATC 2 cut(s) 60, 513
MaeI CTAG 2 cut(s) 317, 780
MaeII ACGT 5 cut(s) 117, 357, 408, 535, 1033
MaeIII GTNAC 5 cut(s) 88, 239, 347, 602, 1029
MalI GATC 4 cut(s) 5, 77, 948, 1213
MboI GATC 4 cut(s) 3, 75, 946, 1211
MfeI CAATTG 1 cut(s) 65
MflI RGATCY 2 cut(s) 75, 1211
MhlI GDGCHC 3 cut(s) 329, 569, 1274
MluCI AATT 3 cut(s) 65, 96, 839
MlyI GAGTC 2 cut(s) 785, 1037
MmeI TCCRAC 1 cut(s) 31
MroI TCCGGA 1 cut(s) 569
MroXI GAANNNNTTC 1 cut(s) 194
MseI TTAA 1 cut(s) 1023
MslI CAYNNNNRTG 1 cut(s) 360
MspA1I CMGCKG 3 cut(s) 473, 557, 623
MspI CCGG 4 cut(s) 102, 570, 695, 708
MspR9I CCNGG 4 cut(s) 102, 322, 696, 709
MunI CAATTG 1 cut(s) 65
MvaI CCWGG 1 cut(s) 322
MvnI CGCG 3 cut(s) 557, 716, 1147
MwoI GCNNNNNNNGC 4 cut(s) 549, 554, 713, 1278
NciI CCSGG 3 cut(s) 102, 696, 709
NcoI CCATGG 1 cut(s) 681
NdeII GATC 4 cut(s) 3, 75, 946, 1211
NlaIII CATG 7 cut(s) 189, 343, 685, 973, 1006, 1100, 1209
NlaIV GGNNCC 4 cut(s) 326, 397, 561, 1050
NmeAIII GCCGAG 1 cut(s) 894
NmuCI GTSAC 2 cut(s) 602, 1029
NruI TCGCGA 1 cut(s) 1147
NspI RCATGY 1 cut(s) 1100
PaeI GCATGC 1 cut(s) 1100
PaqCI CACCTGC 1 cut(s) 855
PciSI GCTCTTC 2 cut(s) 200, 431
PdmI GAANNNNTTC 1 cut(s) 194
PfeI GAWTC 2 cut(s) 483, 577
PkrI GCNGC 5 cut(s) 124, 542, 556, 622, 1095
PleI GAGTC 2 cut(s) 784, 1036
PmaCI CACGTG 1 cut(s) 536
PmlI CACGTG 1 cut(s) 536
PpsI GAGTC 2 cut(s) 784, 1036
Ppu21I YACGTR 2 cut(s) 536, 1034
Psp124BI GAGCTC 1 cut(s) 569
Psp6I CCWGG 1 cut(s) 320
PspCI CACGTG 1 cut(s) 536
PspGI CCWGG 1 cut(s) 320
PspN4I GGNNCC 4 cut(s) 326, 397, 561, 1050
PspPI GGNCC 2 cut(s) 395, 705
PstI CTGCAG 1 cut(s) 1264
PsuI RGATCY 2 cut(s) 75, 1211
RruI TCGCGA 1 cut(s) 1147
RsaI GTAC 2 cut(s) 770, 1175
RsaNI GTAC 2 cut(s) 769, 1174
RseI CAYNNNNRTG 1 cut(s) 360
SacI GAGCTC 1 cut(s) 569
SacII CCGCGG 1 cut(s) 558
SapI GCTCTTC 2 cut(s) 200, 431
SaqAI TTAA 1 cut(s) 1023
SatI GCNGC 5 cut(s) 123, 541, 555, 621, 1094
Sau3AI GATC 4 cut(s) 3, 75, 946, 1211
Sau96I GGNCC 2 cut(s) 395, 705
SchI GAGTC 2 cut(s) 785, 1037
ScrFI CCNGG 4 cut(s) 102, 322, 696, 709
SduI GDGCHC 3 cut(s) 329, 569, 1274
SfaNI GCATC 2 cut(s) 60, 513
SfcI CTRYAG 1 cut(s) 1260
Sfr303I CCGCGG 1 cut(s) 558
SgrBI CCGCGG 1 cut(s) 558
SmiMI CAYNNNNRTG 1 cut(s) 360
SphI GCATGC 1 cut(s) 1100
Sse9I AATT 3 cut(s) 65, 96, 839
SspMI CTAG 2 cut(s) 317, 780
SstI GAGCTC 1 cut(s) 569
StyD4I CCNGG 4 cut(s) 100, 320, 694, 707
StyI CCWWGG 1 cut(s) 681
TaaI ACNGT 2 cut(s) 239, 455
TaiI ACGT 5 cut(s) 120, 360, 411, 538, 1036
TaqI TCGA 4 cut(s) 303, 429, 486, 933
TasI AATT 3 cut(s) 65, 96, 839
TatI WGTACW 1 cut(s) 1173
TauI GCSGC 2 cut(s) 557, 623
TfiI GAWTC 2 cut(s) 483, 577
Tru1I TTAA 1 cut(s) 1023
Tru9I TTAA 1 cut(s) 1023
TseFI GTSAC 2 cut(s) 602, 1029
TseI GCWGC 3 cut(s) 122, 540, 1093
Tsp45I GTSAC 2 cut(s) 602, 1029
TspDTI ATGAA 7 cut(s) 9, 21, 27, 36, 130, 684, 958
TspGWI ACGGA 3 cut(s) 271, 1041, 1101
XagI CCTNNNNNAGG 1 cut(s) 1112
XceI RCATGY 1 cut(s) 1100
XmiI GTMKAC 1 cut(s) 1036
XmnI GAANNNNTTC 1 cut(s) 194
XspI CTAG 2 cut(s) 317, 780
ZraI GACGTC 1 cut(s) 118
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.