Clathrin is the major protein of the polyhedral coat of coated pits and vesicles
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT2G40060 |
| fragaria_vesca | FvH4_4g08020 FvH4_7g24260 |
| malus_domestica | MD00G1024200.v1.1 MD00G1047100.v1.1 MD00G1047900.v1.1 MD00G1048400.v1.1 MD00G1062700.v1.1 MD01G1132200.v1.1 MD01G1150700.v1.1 MD01G1152000.v1.1 MD05G1333900.v1.1 MD07G1216800.v1.1 MD07G1219900.v1.1 |
| prunus_persica | Prupe.2G248500_v2.0.a1 |
| pyrus_communis | pycom01g16830 pycom01g16850 pycom01g16880 pycom07g19900 pycom11g19450 |
| rosa_chinensis | RchiOBHm_Chr1g0369851 |
| rosa_laevigata | RLG00000027088 RLG00000027098 |
| rosa_multiflora | Rmu_co8474619.1_g000001 Rmu_sc0008140.1_g000010 |
| rosa_roxburghii | Rroxscaffold_3G00232620 Rroxscaffold_4G00286940 Rroxscaffold_4G00287110 Rroxscaffold_4G00322920 |
| rosa_rugosa | Rorug01G0352700 |
| rosa_samantha | Rh1AG194100 Rh1AG361200 Rh1BG178100 Rh1BG324900 Rh1CG179000 Rh1CG338100 Rh1DG087000 Rh1DG207800 Rh1DG355300 |
| rosa_wichuraiana | Rw0G015470 Rw1G031810 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AasI | GACNNNNNNGTC | 2 cut(s) | 217, 293 |
| AccB1I | GGYRCC | 1 cut(s) | 769 |
| AccI | GTMKAC | 2 cut(s) | 297, 723 |
| AccII | CGCG | 1 cut(s) | 90 |
| AclWI | GGATC | 2 cut(s) | 458, 810 |
| AcsI | RAATTY | 1 cut(s) | 608 |
| AfaI | GTAC | 2 cut(s) | 157, 970 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 503, 848 |
| AflII | CTTAAG | 1 cut(s) | 920 |
| AgsI | TTSAA | 3 cut(s) | 613, 870, 898 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 304 |
| AjiI | CACGTC | 1 cut(s) | 219 |
| AjnI | CCWGG | 2 cut(s) | 690, 834 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 850, 882 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 671, 703 |
| AluBI | AGCT | 4 cut(s) | 547, 685, 865, 1004 |
| AluI | AGCT | 4 cut(s) | 547, 685, 865, 1004 |
| AlwI | GGATC | 2 cut(s) | 458, 810 |
| Ama87I | CYCGRG | 2 cut(s) | 548, 1010 |
| AoxI | GGCC | 5 cut(s) | 53, 62, 174, 390, 936 |
| ApeKI | GCWGC | 4 cut(s) | 493, 662, 989, 1001 |
| ApoI | RAATTY | 1 cut(s) | 608 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 686 |
| AspLEI | GCGC | 1 cut(s) | 7 |
| AspS9I | GGNCC | 5 cut(s) | 54, 62, 456, 839, 937 |
| AsuC2I | CCSGG | 1 cut(s) | 849 |
| AsuHPI | GGTGA | 1 cut(s) | 921 |
| AvaI | CYCGRG | 2 cut(s) | 548, 1010 |
| AvaII | GGWCC | 2 cut(s) | 456, 839 |
| AxyI | CCTNAGG | 1 cut(s) | 498 |
| BanI | GGYRCC | 1 cut(s) | 769 |
| BbsI | GAAGAC | 1 cut(s) | 204 |
| BbvCI | CCTCAGC | 1 cut(s) | 717 |
| BbvI | GCAGC | 4 cut(s) | 480, 649, 1001, 1013 |
| BccI | CCATC | 3 cut(s) | 434, 826, 934 |
| BceAI | ACGGC | 3 cut(s) | 259, 338, 361 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 115, 149 |
| BciT130I | CCWGG | 2 cut(s) | 692, 836 |
| BciVI | GTATCC | 1 cut(s) | 19 |
| BcnI | CCSGG | 1 cut(s) | 849 |
| BfmI | CTRYAG | 3 cut(s) | 30, 777, 1017 |
| BfrI | CTTAAG | 1 cut(s) | 920 |
| BfuI | GTATCC | 1 cut(s) | 19 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 61 |
| BisI | GCNGC | 6 cut(s) | 476, 494, 663, 990, 999, 1002 |
| BlsI | GCNGC | 6 cut(s) | 477, 495, 664, 991, 1000, 1003 |
| BmcAI | AGTACT | 1 cut(s) | 970 |
| Bme1390I | CCNGG | 3 cut(s) | 692, 836, 849 |
| Bme18I | GGWCC | 2 cut(s) | 456, 839 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 304 |
| BmeT110I | CYCGRG | 2 cut(s) | 548, 1010 |
| BmgBI | CACGTC | 1 cut(s) | 219 |
| BmgT120I | GGNCC | 5 cut(s) | 54, 62, 456, 839, 937 |
| BmiI | GGNNCC | 5 cut(s) | 349, 457, 771, 840, 939 |
| BmrFI | CCNGG | 3 cut(s) | 692, 836, 849 |
| BmsI | GCATC | 2 cut(s) | 352, 480 |
| BpiI | GAAGAC | 1 cut(s) | 204 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 380, 412 |
| Bpu10I | CCTNAGC | 1 cut(s) | 717 |
| BpuEI | CTTGAG | 1 cut(s) | 296 |
| BpuMI | CCSGG | 1 cut(s) | 849 |
| BsaJI | CCNNGG | 6 cut(s) | 88, 343, 835, 951, 984, 1011 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 671, 701, 961, 991 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 503, 848 |
| Bse118I | RCCGGY | 3 cut(s) | 51, 772, 934 |
| Bse1I | ACTGG | 2 cut(s) | 14, 740 |
| Bse21I | CCTNAGG | 1 cut(s) | 498 |
| BseBI | CCWGG | 2 cut(s) | 692, 836 |
| BseDI | CCNNGG | 6 cut(s) | 88, 343, 835, 951, 984, 1011 |
| BseGI | GGATG | 2 cut(s) | 818, 879 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 503, 848 |
| BseMII | CTCAG | 5 cut(s) | 200, 389, 489, 529, 708 |
| BseNI | ACTGG | 2 cut(s) | 14, 740 |
| BseRI | GAGGAG | 5 cut(s) | 390, 515, 541, 566, 969 |
| BseXI | GCAGC | 4 cut(s) | 480, 649, 1001, 1013 |
| BseYI | CCCAGC | 1 cut(s) | 276 |
| Bsh1236I | CGCG | 1 cut(s) | 90 |
| BshFI | GGCC | 5 cut(s) | 55, 64, 176, 392, 938 |
| BshNI | GGYRCC | 1 cut(s) | 769 |
| BsiHKCI | CYCGRG | 2 cut(s) | 548, 1010 |
| BsiSI | CCGG | 5 cut(s) | 23, 52, 773, 849, 935 |
| BslFI | GGGAC | 2 cut(s) | 191, 852 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 503, 848 |
| BsmFI | GGGAC | 2 cut(s) | 191, 852 |
| BsmI | GAATGC | 1 cut(s) | 541 |
| BsnI | GGCC | 5 cut(s) | 55, 64, 176, 392, 938 |
| BsoBI | CYCGRG | 2 cut(s) | 548, 1010 |
| Bsp143I | GATC | 5 cut(s) | 168, 408, 463, 639, 802 |
| BspANI | GGCC | 5 cut(s) | 55, 64, 176, 392, 938 |
| BspCNI | CTCAG | 5 cut(s) | 199, 388, 490, 528, 709 |
| BspFNI | CGCG | 1 cut(s) | 90 |
| BspLI | GGNNCC | 5 cut(s) | 349, 457, 771, 840, 939 |
| BspMAI | CTGCAG | 1 cut(s) | 34 |
| BspPI | GGATC | 2 cut(s) | 458, 810 |
| BspT107I | GGYRCC | 1 cut(s) | 769 |
| BspTI | CTTAAG | 1 cut(s) | 920 |
| BsrFI | RCCGGY | 3 cut(s) | 51, 772, 934 |
| BsrI | ACTGG | 2 cut(s) | 14, 740 |
| BssAI | RCCGGY | 3 cut(s) | 51, 772, 934 |
| BssECI | CCNNGG | 6 cut(s) | 88, 343, 835, 951, 984, 1011 |
| BssMI | GATC | 5 cut(s) | 168, 408, 463, 639, 802 |
| BssT1I | CCWWGG | 2 cut(s) | 951, 984 |
| Bst2UI | CCWGG | 2 cut(s) | 692, 836 |
| Bst6I | CTCTTC | 2 cut(s) | 626, 782 |
| BstAFI | CTTAAG | 1 cut(s) | 920 |
| BstAPI | GCANNNNNTGC | 2 cut(s) | 38, 995 |
| BstC8I | GCNNGC | 6 cut(s) | 53, 66, 88, 124, 381, 774 |
| BstDEI | CTNAG | 5 cut(s) | 186, 375, 498, 515, 717 |
| BstDSI | CCRYGG | 2 cut(s) | 88, 343 |
| BstF5I | GGATG | 2 cut(s) | 818, 879 |
| BstFNI | CGCG | 1 cut(s) | 90 |
| BstHHI | GCGC | 1 cut(s) | 7 |
| BstKTI | GATC | 5 cut(s) | 171, 411, 466, 642, 805 |
| BstMBI | GATC | 5 cut(s) | 168, 408, 463, 639, 802 |
| BstMWI | GCNNNNNNNGC | 9 cut(s) | 38, 61, 389, 853, 862, 956, 995, 998, 1022 |
| BstNI | CCWGG | 2 cut(s) | 692, 836 |
| BstSCI | CCNGG | 3 cut(s) | 690, 834, 847 |
| BstSFI | CTRYAG | 3 cut(s) | 30, 777, 1017 |
| BstUI | CGCG | 1 cut(s) | 90 |
| BstV1I | GCAGC | 4 cut(s) | 480, 649, 1001, 1013 |
| BstV2I | GAAGAC | 1 cut(s) | 204 |
| Bsu36I | CCTNAGG | 1 cut(s) | 498 |
| BsuI | GTATCC | 1 cut(s) | 19 |
| BsuRI | GGCC | 5 cut(s) | 55, 64, 176, 392, 938 |
| BtgI | CCRYGG | 2 cut(s) | 88, 343 |
| BtgZI | GCGATG | 1 cut(s) | 375 |
| BtrI | CACGTC | 1 cut(s) | 219 |
| BtsCI | GGATG | 2 cut(s) | 818, 879 |
| Cac8I | GCNNGC | 6 cut(s) | 53, 66, 88, 124, 381, 774 |
| CfoI | GCGC | 1 cut(s) | 7 |
| Cfr10I | RCCGGY | 3 cut(s) | 51, 772, 934 |
| Cfr13I | GGNCC | 5 cut(s) | 54, 62, 456, 839, 937 |
| Cfr42I | CCGCGG | 1 cut(s) | 91 |
| CseI | GACGC | 2 cut(s) | 372, 965 |
| Csp6I | GTAC | 2 cut(s) | 156, 969 |
| CviAII | CATG | 3 cut(s) | 19, 172, 713 |
| CviQI | GTAC | 2 cut(s) | 156, 969 |
| DdeI | CTNAG | 5 cut(s) | 186, 375, 498, 515, 717 |
| DpnI | GATC | 5 cut(s) | 170, 410, 465, 641, 804 |
| DpnII | GATC | 5 cut(s) | 168, 408, 463, 639, 802 |
| DraI | TTTAAA | 1 cut(s) | 891 |
| DrdI | GACNNNNNNGTC | 2 cut(s) | 217, 293 |
| DriI | GACNNNNNGTC | 1 cut(s) | 304 |
| DseDI | GACNNNNNNGTC | 2 cut(s) | 217, 293 |
| Eam1104I | CTCTTC | 2 cut(s) | 626, 782 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 304 |
| EarI | CTCTTC | 2 cut(s) | 626, 782 |
| EciI | GGCGGA | 2 cut(s) | 310, 340 |
| Eco130I | CCWWGG | 2 cut(s) | 951, 984 |
| Eco147I | AGGCCT | 1 cut(s) | 392 |
| Eco47I | GGWCC | 2 cut(s) | 456, 839 |
| Eco81I | CCTNAGG | 1 cut(s) | 498 |
| Eco88I | CYCGRG | 2 cut(s) | 548, 1010 |
| EcoRI | GAATTC | 1 cut(s) | 608 |
| EcoRII | CCWGG | 2 cut(s) | 690, 834 |
| EcoT14I | CCWWGG | 2 cut(s) | 951, 984 |
| ErhI | CCWWGG | 2 cut(s) | 951, 984 |
| FaeI | CATG | 3 cut(s) | 22, 175, 716 |
| FaiI | YATR | 5 cut(s) | 20, 173, 714, 779, 1033 |
| FaqI | GGGAC | 2 cut(s) | 191, 852 |
| FatI | CATG | 3 cut(s) | 18, 171, 712 |
| FauI | CCCGC | 4 cut(s) | 95, 446, 558, 955 |
| FblI | GTMKAC | 2 cut(s) | 297, 723 |
| Fnu4HI | GCNGC | 6 cut(s) | 476, 494, 663, 990, 999, 1002 |
| FokI | GGATG | 2 cut(s) | 805, 886 |
| Fsp4HI | GCNGC | 6 cut(s) | 476, 494, 663, 990, 999, 1002 |
| GlaI | GCGC | 1 cut(s) | 6 |
| GluI | GCNGC | 6 cut(s) | 476, 494, 663, 990, 999, 1002 |
| GsaI | CCCAGC | 1 cut(s) | 280 |
| HaeIII | GGCC | 5 cut(s) | 55, 64, 176, 392, 938 |
| HapII | CCGG | 5 cut(s) | 23, 52, 773, 849, 935 |
| HgaI | GACGC | 2 cut(s) | 372, 965 |
| HhaI | GCGC | 1 cut(s) | 7 |
| Hin1II | CATG | 3 cut(s) | 22, 175, 716 |
| Hin6I | GCGC | 1 cut(s) | 5 |
| HinP1I | GCGC | 1 cut(s) | 5 |
| HincII | GTYRAC | 2 cut(s) | 222, 298 |
| HindII | GTYRAC | 2 cut(s) | 222, 298 |
| HpaII | CCGG | 5 cut(s) | 23, 52, 773, 849, 935 |
| HphI | GGTGA | 1 cut(s) | 921 |
| Hpy166II | GTNNAC | 4 cut(s) | 183, 222, 298, 724 |
| Hpy188I | TCNGA | 5 cut(s) | 388, 460, 487, 518, 588 |
| Hpy188III | TCNNGA | 3 cut(s) | 208, 701, 806 |
| Hpy8I | GTNNAC | 4 cut(s) | 183, 222, 298, 724 |
| Hpy99I | CGWCG | 7 cut(s) | 239, 242, 245, 299, 388, 464, 487 |
| HpyAV | CCTTC | 6 cut(s) | 301, 403, 414, 550, 733, 793 |
| HpyCH4IV | ACGT | 1 cut(s) | 218 |
| HpyCH4V | TGCA | 3 cut(s) | 32, 122, 539 |
| HpyF10VI | GCNNNNNNNGC | 9 cut(s) | 38, 61, 389, 853, 862, 956, 995, 998, 1022 |
| HpyF3I | CTNAG | 5 cut(s) | 186, 375, 498, 515, 717 |
| HpySE526I | ACGT | 1 cut(s) | 218 |
| Hsp92II | CATG | 3 cut(s) | 22, 175, 716 |
| HspAI | GCGC | 1 cut(s) | 5 |
| KroI | GCCGGC | 2 cut(s) | 51, 772 |
| KroNI | GCCGGC | 2 cut(s) | 53, 774 |
| KspI | CCGCGG | 1 cut(s) | 91 |
| Kzo9I | GATC | 5 cut(s) | 168, 408, 463, 639, 802 |
| LmnI | GCTCC | 2 cut(s) | 353, 982 |
| Lsp1109I | GCAGC | 4 cut(s) | 480, 649, 1001, 1013 |
| LweI | GCATC | 2 cut(s) | 352, 480 |
| MaeII | ACGT | 1 cut(s) | 218 |
| MaeIII | GTNAC | 1 cut(s) | 254 |
| MalI | GATC | 5 cut(s) | 170, 410, 465, 641, 804 |
| MboI | GATC | 5 cut(s) | 168, 408, 463, 639, 802 |
| MboII | GAAGA | 9 cut(s) | 206, 209, 331, 643, 649, 796, 799, 808, 1020 |
| MfeI | CAATTG | 2 cut(s) | 744, 993 |
| MluCI | AATT | 4 cut(s) | 540, 608, 744, 993 |
| MlyI | GAGTC | 6 cut(s) | 158, 194, 261, 281, 311, 314 |
| MmeI | TCCRAC | 3 cut(s) | 366, 465, 483 |
| MroNI | GCCGGC | 2 cut(s) | 51, 772 |
| MroXI | GAANNNNTTC | 1 cut(s) | 686 |
| MseI | TTAA | 2 cut(s) | 890, 921 |
| MspA1I | CMGCKG | 1 cut(s) | 90 |
| MspCI | CTTAAG | 1 cut(s) | 920 |
| MspI | CCGG | 5 cut(s) | 23, 52, 773, 849, 935 |
| MspR9I | CCNGG | 3 cut(s) | 692, 836, 849 |
| MunI | CAATTG | 2 cut(s) | 744, 993 |
| Mva1269I | GAATGC | 1 cut(s) | 541 |
| MvaI | CCWGG | 2 cut(s) | 692, 836 |
| MvnI | CGCG | 1 cut(s) | 90 |
| MwoI | GCNNNNNNNGC | 9 cut(s) | 38, 61, 389, 853, 862, 956, 995, 998, 1022 |
| NaeI | GCCGGC | 2 cut(s) | 53, 774 |
| NciI | CCSGG | 1 cut(s) | 849 |
| NdeII | GATC | 5 cut(s) | 168, 408, 463, 639, 802 |
| NgoMIV | GCCGGC | 2 cut(s) | 51, 772 |
| NlaIII | CATG | 3 cut(s) | 22, 175, 716 |
| NlaIV | GGNNCC | 5 cut(s) | 349, 457, 771, 840, 939 |
| NmeAIII | GCCGAG | 1 cut(s) | 114 |
| PaeR7I | CTCGAG | 1 cut(s) | 548 |
| PceI | AGGCCT | 1 cut(s) | 392 |
| PcsI | WCGNNNNNNNCGW | 3 cut(s) | 291, 300, 351 |
| PctI | GAATGC | 1 cut(s) | 541 |
| PdiI | GCCGGC | 2 cut(s) | 53, 774 |
| PdmI | GAANNNNTTC | 1 cut(s) | 686 |
| PfeI | GAWTC | 4 cut(s) | 282, 329, 419, 621 |
| PflFI | GACNNNGTC | 1 cut(s) | 203 |
| PkrI | GCNGC | 6 cut(s) | 477, 495, 664, 991, 1000, 1003 |
| PleI | GAGTC | 6 cut(s) | 158, 194, 261, 281, 311, 313 |
| PpsI | GAGTC | 6 cut(s) | 158, 194, 261, 281, 311, 313 |
| Psp6I | CCWGG | 2 cut(s) | 690, 834 |
| PspFI | CCCAGC | 1 cut(s) | 276 |
| PspGI | CCWGG | 2 cut(s) | 690, 834 |
| PspN4I | GGNNCC | 5 cut(s) | 349, 457, 771, 840, 939 |
| PspPI | GGNCC | 5 cut(s) | 54, 62, 456, 839, 937 |
| PspXI | VCTCGAGB | 1 cut(s) | 548 |
| PstI | CTGCAG | 1 cut(s) | 34 |
| PsyI | GACNNNGTC | 1 cut(s) | 203 |
| RsaI | GTAC | 2 cut(s) | 157, 970 |
| RsaNI | GTAC | 2 cut(s) | 156, 969 |
| SacII | CCGCGG | 1 cut(s) | 91 |
| SalI | GTCGAC | 1 cut(s) | 296 |
| SaqAI | TTAA | 2 cut(s) | 890, 921 |
| SatI | GCNGC | 6 cut(s) | 476, 494, 663, 990, 999, 1002 |
| Sau3AI | GATC | 5 cut(s) | 168, 408, 463, 639, 802 |
| Sau96I | GGNCC | 5 cut(s) | 54, 62, 456, 839, 937 |
| ScaI | AGTACT | 1 cut(s) | 970 |
| SchI | GAGTC | 6 cut(s) | 158, 194, 261, 281, 311, 314 |
| ScrFI | CCNGG | 3 cut(s) | 692, 836, 849 |
| SfaNI | GCATC | 2 cut(s) | 352, 480 |
| SfcI | CTRYAG | 3 cut(s) | 30, 777, 1017 |
| SfiI | GGCCNNNNNGGCC | 1 cut(s) | 61 |
| Sfr274I | CTCGAG | 1 cut(s) | 548 |
| Sfr303I | CCGCGG | 1 cut(s) | 91 |
| SgrBI | CCGCGG | 1 cut(s) | 91 |
| SinI | GGWCC | 2 cut(s) | 456, 839 |
| SlaI | CTCGAG | 1 cut(s) | 548 |
| SmlI | CTYRAG | 3 cut(s) | 311, 548, 920 |
| SmoI | CTYRAG | 3 cut(s) | 311, 548, 920 |
| Sse9I | AATT | 4 cut(s) | 540, 608, 744, 993 |
| SseBI | AGGCCT | 1 cut(s) | 392 |
| StuI | AGGCCT | 1 cut(s) | 392 |
| StyD4I | CCNGG | 3 cut(s) | 690, 834, 847 |
| StyI | CCWWGG | 2 cut(s) | 951, 984 |
| TaiI | ACGT | 1 cut(s) | 221 |
| TaqI | TCGA | 8 cut(s) | 167, 234, 285, 297, 407, 422, 549, 594 |
| TasI | AATT | 4 cut(s) | 540, 608, 744, 993 |
| TatI | WGTACW | 2 cut(s) | 155, 968 |
| TauI | GCSGC | 2 cut(s) | 478, 1001 |
| TfiI | GAWTC | 4 cut(s) | 282, 329, 419, 621 |
| Tru1I | TTAA | 2 cut(s) | 890, 921 |
| Tru9I | TTAA | 2 cut(s) | 890, 921 |
| TseI | GCWGC | 4 cut(s) | 493, 662, 989, 1001 |
| TspDTI | ATGAA | 3 cut(s) | 621, 701, 1020 |
| TspGWI | ACGGA | 2 cut(s) | 193, 471 |
| Tth111I | GACNNNGTC | 1 cut(s) | 203 |
| Vha464I | CTTAAG | 1 cut(s) | 920 |
| VpaK11BI | GGWCC | 2 cut(s) | 456, 839 |
| XapI | RAATTY | 1 cut(s) | 608 |
| XhoI | CTCGAG | 1 cut(s) | 548 |
| XmiI | GTMKAC | 2 cut(s) | 297, 723 |
| XmnI | GAANNNNTTC | 1 cut(s) | 686 |
| ZrmI | AGTACT | 1 cut(s) | 970 |