Clathrin is the major protein of the polyhedral coat of coated pits and vesicles
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT2G40060 |
| fragaria_vesca | FvH4_4g08020 FvH4_7g24260 |
| malus_domestica | MD00G1024200.v1.1 MD00G1047100.v1.1 MD00G1047900.v1.1 MD00G1048400.v1.1 MD00G1062700.v1.1 MD01G1132200.v1.1 MD01G1150700.v1.1 MD01G1152000.v1.1 MD05G1333900.v1.1 MD07G1216800.v1.1 MD07G1219900.v1.1 |
| prunus_persica | Prupe.2G248500_v2.0.a1 |
| pyrus_communis | pycom01g16830 pycom01g16850 pycom01g16880 pycom07g19900 pycom11g19450 |
| rosa_chinensis | RchiOBHm_Chr1g0369851 |
| rosa_laevigata | RLG00000027088 RLG00000027098 |
| rosa_multiflora | Rmu_co8474619.1_g000001 Rmu_sc0008140.1_g000010 |
| rosa_roxburghii | Rroxscaffold_3G00232620 Rroxscaffold_4G00286940 Rroxscaffold_4G00287110 Rroxscaffold_4G00322920 |
| rosa_rugosa | Rorug01G0352700 |
| rosa_samantha | Rh1AG194100 Rh1AG361200 Rh1BG178100 Rh1BG324900 Rh1CG179000 Rh1CG338100 Rh1DG087000 Rh1DG207800 Rh1DG355300 |
| rosa_wichuraiana | Rw0G015470 Rw1G031810 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB1I | GGYRCC | 1 cut(s) | 91 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 170 |
| AciI | CCGC | 2 cut(s) | 267, 291 |
| AclWI | GGATC | 1 cut(s) | 132 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 170 |
| AgsI | TTSAA | 1 cut(s) | 220 |
| AjnI | CCWGG | 1 cut(s) | 169 |
| AluBI | AGCT | 4 cut(s) | 98, 187, 302, 320 |
| AluI | AGCT | 4 cut(s) | 98, 187, 302, 320 |
| Alw21I | GWGCWC | 1 cut(s) | 189 |
| AlwI | GGATC | 1 cut(s) | 132 |
| AoxI | GGCC | 1 cut(s) | 160 |
| ApeKI | GCWGC | 5 cut(s) | 269, 299, 302, 320, 323 |
| AspLEI | GCGC | 1 cut(s) | 307 |
| AspS9I | GGNCC | 1 cut(s) | 161 |
| AsuHPI | GGTGA | 1 cut(s) | 230 |
| AxyI | CCTNAGG | 2 cut(s) | 276, 309 |
| BanI | GGYRCC | 1 cut(s) | 91 |
| BanII | GRGCYC | 1 cut(s) | 189 |
| Bbv12I | GWGCWC | 1 cut(s) | 189 |
| BbvCI | CCTCAGC | 1 cut(s) | 39 |
| BbvI | GCAGC | 5 cut(s) | 256, 289, 307, 310, 311 |
| BciT130I | CCWGG | 1 cut(s) | 171 |
| BfaI | CTAG | 1 cut(s) | 263 |
| BfmI | CTRYAG | 3 cut(s) | 99, 282, 315 |
| BglI | GCCNNNNNGGC | 2 cut(s) | 278, 296 |
| BglII | AGATCT | 1 cut(s) | 73 |
| BisI | GCNGC | 7 cut(s) | 267, 270, 291, 300, 303, 321, 324 |
| BlsI | GCNGC | 7 cut(s) | 268, 271, 292, 301, 304, 322, 325 |
| Bme1390I | CCNGG | 1 cut(s) | 171 |
| BmgT120I | GGNCC | 1 cut(s) | 161 |
| BmiI | GGNNCC | 1 cut(s) | 93 |
| BmrFI | CCNGG | 1 cut(s) | 171 |
| Bpu10I | CCTNAGC | 1 cut(s) | 39 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 170 |
| Bse1I | ACTGG | 2 cut(s) | 20, 261 |
| Bse21I | CCTNAGG | 2 cut(s) | 276, 309 |
| BseBI | CCWGG | 1 cut(s) | 171 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 170 |
| BseMII | CTCAG | 4 cut(s) | 30, 174, 267, 300 |
| BseNI | ACTGG | 2 cut(s) | 20, 261 |
| BseRI | GAGGAG | 1 cut(s) | 225 |
| BseXI | GCAGC | 5 cut(s) | 256, 289, 307, 310, 311 |
| BshFI | GGCC | 1 cut(s) | 162 |
| BshNI | GGYRCC | 1 cut(s) | 91 |
| BsiHKAI | GWGCWC | 1 cut(s) | 189 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 170 |
| BsnI | GGCC | 1 cut(s) | 162 |
| Bsp1286I | GDGCHC | 1 cut(s) | 189 |
| Bsp143I | GATC | 2 cut(s) | 73, 124 |
| BspACI | CCGC | 2 cut(s) | 267, 291 |
| BspANI | GGCC | 1 cut(s) | 162 |
| BspCNI | CTCAG | 4 cut(s) | 31, 175, 268, 301 |
| BspLI | GGNNCC | 1 cut(s) | 93 |
| BspPI | GGATC | 1 cut(s) | 132 |
| BspT107I | GGYRCC | 1 cut(s) | 91 |
| BsrI | ACTGG | 2 cut(s) | 20, 261 |
| BssMI | GATC | 2 cut(s) | 73, 124 |
| Bst2UI | CCWGG | 1 cut(s) | 171 |
| Bst6I | CTCTTC | 1 cut(s) | 104 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 229 |
| BstC8I | GCNNGC | 1 cut(s) | 96 |
| BstDEI | CTNAG | 4 cut(s) | 39, 183, 276, 309 |
| BstHHI | GCGC | 1 cut(s) | 307 |
| BstKTI | GATC | 2 cut(s) | 76, 127 |
| BstMBI | GATC | 2 cut(s) | 73, 124 |
| BstMWI | GCNNNNNNNGC | 9 cut(s) | 184, 229, 266, 278, 287, 296, 299, 311, 320 |
| BstNI | CCWGG | 1 cut(s) | 171 |
| BstSCI | CCNGG | 1 cut(s) | 169 |
| BstSFI | CTRYAG | 3 cut(s) | 99, 282, 315 |
| BstV1I | GCAGC | 5 cut(s) | 256, 289, 307, 310, 311 |
| BstX2I | RGATCY | 1 cut(s) | 73 |
| BstYI | RGATCY | 1 cut(s) | 73 |
| Bsu36I | CCTNAGG | 2 cut(s) | 276, 309 |
| BsuRI | GGCC | 1 cut(s) | 162 |
| BtsIMutI | CAGTG | 1 cut(s) | 254 |
| Cac8I | GCNNGC | 1 cut(s) | 96 |
| CfoI | GCGC | 1 cut(s) | 307 |
| Cfr13I | GGNCC | 1 cut(s) | 161 |
| CsiI | ACCWGGT | 1 cut(s) | 169 |
| CviAII | CATG | 1 cut(s) | 35 |
| DdeI | CTNAG | 4 cut(s) | 39, 183, 276, 309 |
| DpnI | GATC | 2 cut(s) | 75, 126 |
| DpnII | GATC | 2 cut(s) | 73, 124 |
| Eam1104I | CTCTTC | 1 cut(s) | 104 |
| EarI | CTCTTC | 1 cut(s) | 104 |
| Ecl136II | GAGCTC | 1 cut(s) | 187 |
| Eco24I | GRGCYC | 1 cut(s) | 189 |
| Eco53kI | GAGCTC | 1 cut(s) | 187 |
| Eco81I | CCTNAGG | 2 cut(s) | 276, 309 |
| EcoICRI | GAGCTC | 1 cut(s) | 187 |
| EcoRII | CCWGG | 1 cut(s) | 169 |
| EcoT38I | GRGCYC | 1 cut(s) | 189 |
| FaeI | CATG | 1 cut(s) | 38 |
| FaiI | YATR | 5 cut(s) | 36, 101, 225, 230, 317 |
| FatI | CATG | 1 cut(s) | 34 |
| Fnu4HI | GCNGC | 7 cut(s) | 267, 270, 291, 300, 303, 321, 324 |
| FriOI | GRGCYC | 1 cut(s) | 189 |
| Fsp4HI | GCNGC | 7 cut(s) | 267, 270, 291, 300, 303, 321, 324 |
| FspBI | CTAG | 1 cut(s) | 263 |
| GlaI | GCGC | 1 cut(s) | 306 |
| GluI | GCNGC | 7 cut(s) | 267, 270, 291, 300, 303, 321, 324 |
| HaeIII | GGCC | 1 cut(s) | 162 |
| HhaI | GCGC | 1 cut(s) | 307 |
| Hin1II | CATG | 1 cut(s) | 38 |
| Hin6I | GCGC | 1 cut(s) | 305 |
| HinP1I | GCGC | 1 cut(s) | 305 |
| HphI | GGTGA | 1 cut(s) | 230 |
| Hpy188III | TCNNGA | 3 cut(s) | 25, 128, 190 |
| Hpy99I | CGWCG | 1 cut(s) | 196 |
| HpyAV | CCTTC | 4 cut(s) | 55, 115, 150, 258 |
| HpyCH4V | TGCA | 2 cut(s) | 71, 157 |
| HpyF10VI | GCNNNNNNNGC | 9 cut(s) | 184, 229, 266, 278, 287, 296, 299, 311, 320 |
| HpyF3I | CTNAG | 4 cut(s) | 39, 183, 276, 309 |
| Hsp92II | CATG | 1 cut(s) | 38 |
| HspAI | GCGC | 1 cut(s) | 305 |
| Kzo9I | GATC | 2 cut(s) | 73, 124 |
| LpnPI | CCDG | 7 cut(s) | 33, 108, 156, 183, 242, 288, 321 |
| Lsp1109I | GCAGC | 5 cut(s) | 256, 289, 307, 310, 311 |
| MabI | ACCWGGT | 1 cut(s) | 169 |
| MaeI | CTAG | 1 cut(s) | 263 |
| MaeIII | GTNAC | 1 cut(s) | 15 |
| MalI | GATC | 2 cut(s) | 75, 126 |
| MboI | GATC | 2 cut(s) | 73, 124 |
| MboII | GAAGA | 3 cut(s) | 118, 121, 130 |
| MflI | RGATCY | 1 cut(s) | 73 |
| MhlI | GDGCHC | 1 cut(s) | 189 |
| MluCI | AATT | 1 cut(s) | 215 |
| MnlI | CCTC | 8 cut(s) | 34, 82, 107, 192, 243, 246, 271, 304 |
| MspA1I | CMGCKG | 3 cut(s) | 269, 293, 302 |
| MspR9I | CCNGG | 1 cut(s) | 171 |
| MvaI | CCWGG | 1 cut(s) | 171 |
| MwoI | GCNNNNNNNGC | 9 cut(s) | 184, 229, 266, 278, 287, 296, 299, 311, 320 |
| NdeII | GATC | 2 cut(s) | 73, 124 |
| NlaIII | CATG | 1 cut(s) | 38 |
| NlaIV | GGNNCC | 1 cut(s) | 93 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 170 |
| PkrI | GCNGC | 7 cut(s) | 268, 271, 292, 301, 304, 322, 325 |
| Psp124BI | GAGCTC | 1 cut(s) | 189 |
| Psp6I | CCWGG | 1 cut(s) | 169 |
| PspGI | CCWGG | 1 cut(s) | 169 |
| PspN4I | GGNNCC | 1 cut(s) | 93 |
| PspPI | GGNCC | 1 cut(s) | 161 |
| PsuI | RGATCY | 1 cut(s) | 73 |
| PvuII | CAGCTG | 1 cut(s) | 302 |
| SacI | GAGCTC | 1 cut(s) | 189 |
| SatI | GCNGC | 7 cut(s) | 267, 270, 291, 300, 303, 321, 324 |
| Sau3AI | GATC | 2 cut(s) | 73, 124 |
| Sau96I | GGNCC | 1 cut(s) | 161 |
| ScrFI | CCNGG | 1 cut(s) | 171 |
| SduI | GDGCHC | 1 cut(s) | 189 |
| SetI | ASST | 7 cut(s) | 93, 100, 172, 189, 243, 304, 322 |
| SexAI | ACCWGGT | 1 cut(s) | 169 |
| SfcI | CTRYAG | 3 cut(s) | 99, 282, 315 |
| Sse9I | AATT | 1 cut(s) | 215 |
| SsiI | CCGC | 2 cut(s) | 267, 291 |
| SspMI | CTAG | 1 cut(s) | 263 |
| SstI | GAGCTC | 1 cut(s) | 189 |
| StyD4I | CCNGG | 1 cut(s) | 169 |
| TaqI | TCGA | 2 cut(s) | 59, 191 |
| TasI | AATT | 1 cut(s) | 215 |
| TauI | GCSGC | 2 cut(s) | 269, 293 |
| TscAI | CASTG | 1 cut(s) | 261 |
| TseI | GCWGC | 5 cut(s) | 269, 299, 302, 320, 323 |
| TspDTI | ATGAA | 1 cut(s) | 23 |
| TspRI | CASTG | 1 cut(s) | 261 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 170 |
| XspI | CTAG | 1 cut(s) | 263 |