Clathrin is the major protein of the polyhedral coat of coated pits and vesicles
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT2G40060 |
| fragaria_vesca | FvH4_4g08020 FvH4_7g24260 |
| malus_domestica | MD00G1024200.v1.1 MD00G1047100.v1.1 MD00G1047900.v1.1 MD00G1048400.v1.1 MD00G1062700.v1.1 MD01G1132200.v1.1 MD01G1150700.v1.1 MD01G1152000.v1.1 MD05G1333900.v1.1 MD07G1216800.v1.1 MD07G1219900.v1.1 |
| prunus_persica | Prupe.2G248500_v2.0.a1 |
| pyrus_communis | pycom01g16830 pycom01g16850 pycom01g16880 pycom07g19900 pycom11g19450 |
| rosa_chinensis | RchiOBHm_Chr1g0369851 |
| rosa_laevigata | RLG00000027088 RLG00000027098 |
| rosa_multiflora | Rmu_co8474619.1_g000001 Rmu_sc0008140.1_g000010 |
| rosa_roxburghii | Rroxscaffold_3G00232620 Rroxscaffold_4G00286940 Rroxscaffold_4G00287110 Rroxscaffold_4G00322920 |
| rosa_rugosa | Rorug01G0352700 |
| rosa_samantha | Rh1AG194100 Rh1AG361200 Rh1BG178100 Rh1BG324900 Rh1CG179000 Rh1CG338100 Rh1DG087000 Rh1DG207800 Rh1DG355300 |
| rosa_wichuraiana | Rw0G015470 Rw1G031810 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB7I | CCANNNNNTGG | 1 cut(s) | 377 |
| AccI | GTMKAC | 2 cut(s) | 81, 141 |
| AciI | CCGC | 1 cut(s) | 237 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 287, 288, 377 |
| AgsI | TTSAA | 2 cut(s) | 252, 427 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 88 |
| AjnI | CCWGG | 2 cut(s) | 213, 376 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 379, 411 |
| AluBI | AGCT | 1 cut(s) | 394 |
| AluI | AGCT | 1 cut(s) | 394 |
| Ama87I | CYCGRG | 1 cut(s) | 282 |
| AoxI | GGCC | 1 cut(s) | 174 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 134, 166 |
| AspS9I | GGNCC | 2 cut(s) | 240, 368 |
| AsuHPI | GGTGA | 1 cut(s) | 415 |
| AvaI | CYCGRG | 1 cut(s) | 282 |
| AvaII | GGWCC | 2 cut(s) | 240, 368 |
| BccI | CCATC | 4 cut(s) | 20, 218, 270, 355 |
| BceAI | ACGGC | 1 cut(s) | 145 |
| BciT130I | CCWGG | 2 cut(s) | 215, 378 |
| Bme1390I | CCNGG | 2 cut(s) | 215, 378 |
| Bme18I | GGWCC | 2 cut(s) | 240, 368 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 88 |
| BmeT110I | CYCGRG | 1 cut(s) | 282 |
| BmgT120I | GGNCC | 2 cut(s) | 240, 368 |
| BmiI | GGNNCC | 2 cut(s) | 73, 241 |
| BmrFI | CCNGG | 2 cut(s) | 215, 378 |
| BmsI | GCATC | 1 cut(s) | 264 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 164, 196 |
| BpuEI | CTTGAG | 1 cut(s) | 80 |
| BsaJI | CCNNGG | 4 cut(s) | 127, 214, 283, 364 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 287, 288, 377 |
| BseBI | CCWGG | 2 cut(s) | 215, 378 |
| BseDI | CCNNGG | 4 cut(s) | 127, 214, 283, 364 |
| BseGI | GGATG | 2 cut(s) | 262, 347 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 287, 288, 377 |
| BseMII | CTCAG | 1 cut(s) | 173 |
| BseRI | GAGGAG | 1 cut(s) | 300 |
| BshFI | GGCC | 1 cut(s) | 176 |
| BsiHKCI | CYCGRG | 1 cut(s) | 282 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 287, 288, 377 |
| BsnI | GGCC | 1 cut(s) | 176 |
| BsoBI | CYCGRG | 1 cut(s) | 282 |
| Bsp143I | GATC | 1 cut(s) | 192 |
| BspACI | CCGC | 1 cut(s) | 237 |
| BspANI | GGCC | 1 cut(s) | 176 |
| BspCNI | CTCAG | 1 cut(s) | 172 |
| BspLI | GGNNCC | 2 cut(s) | 73, 241 |
| BssECI | CCNNGG | 4 cut(s) | 127, 214, 283, 364 |
| BssMI | GATC | 1 cut(s) | 192 |
| BssT1I | CCWWGG | 1 cut(s) | 364 |
| Bst2UI | CCWGG | 2 cut(s) | 215, 378 |
| Bst6I | CTCTTC | 2 cut(s) | 309, 318 |
| BstC8I | GCNNGC | 1 cut(s) | 301 |
| BstDEI | CTNAG | 2 cut(s) | 34, 159 |
| BstDSI | CCRYGG | 1 cut(s) | 127 |
| BstF5I | GGATG | 2 cut(s) | 262, 347 |
| BstKTI | GATC | 1 cut(s) | 195 |
| BstMBI | GATC | 1 cut(s) | 192 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 182, 382, 391 |
| BstNI | CCWGG | 2 cut(s) | 215, 378 |
| BstSCI | CCNGG | 2 cut(s) | 213, 376 |
| BsuRI | GGCC | 1 cut(s) | 176 |
| BtgI | CCRYGG | 1 cut(s) | 127 |
| BtsCI | GGATG | 2 cut(s) | 262, 347 |
| Cac8I | GCNNGC | 1 cut(s) | 301 |
| Cfr13I | GGNCC | 2 cut(s) | 240, 368 |
| DdeI | CTNAG | 2 cut(s) | 34, 159 |
| DpnI | GATC | 1 cut(s) | 194 |
| DpnII | GATC | 1 cut(s) | 192 |
| DraI | TTTAAA | 1 cut(s) | 420 |
| DriI | GACNNNNNGTC | 1 cut(s) | 88 |
| Eam1104I | CTCTTC | 2 cut(s) | 309, 318 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 88 |
| EarI | CTCTTC | 2 cut(s) | 309, 318 |
| Eco130I | CCWWGG | 1 cut(s) | 364 |
| Eco147I | AGGCCT | 1 cut(s) | 176 |
| Eco47I | GGWCC | 2 cut(s) | 240, 368 |
| Eco88I | CYCGRG | 1 cut(s) | 282 |
| EcoRII | CCWGG | 2 cut(s) | 213, 376 |
| EcoT14I | CCWWGG | 1 cut(s) | 364 |
| ErhI | CCWWGG | 1 cut(s) | 364 |
| FaiI | YATR | 3 cut(s) | 42, 335, 432 |
| FauI | CCCGC | 1 cut(s) | 230 |
| FblI | GTMKAC | 2 cut(s) | 81, 141 |
| FokI | GGATG | 2 cut(s) | 249, 334 |
| HaeIII | GGCC | 1 cut(s) | 176 |
| HincII | GTYRAC | 1 cut(s) | 82 |
| HindII | GTYRAC | 1 cut(s) | 82 |
| HinfI | GANTC | 4 cut(s) | 66, 83, 89, 203 |
| HphI | GGTGA | 1 cut(s) | 415 |
| Hpy166II | GTNNAC | 2 cut(s) | 82, 142 |
| Hpy188I | TCNGA | 2 cut(s) | 88, 244 |
| Hpy188III | TCNNGA | 1 cut(s) | 97 |
| Hpy8I | GTNNAC | 2 cut(s) | 82, 142 |
| Hpy99I | CGWCG | 3 cut(s) | 26, 83, 149 |
| HpyAV | CCTTC | 4 cut(s) | 67, 85, 187, 322 |
| HpyCH4IV | ACGT | 1 cut(s) | 147 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 182, 382, 391 |
| HpyF3I | CTNAG | 2 cut(s) | 34, 159 |
| HpySE526I | ACGT | 1 cut(s) | 147 |
| Kzo9I | GATC | 1 cut(s) | 192 |
| LmnI | GCTCC | 2 cut(s) | 77, 190 |
| LpnPI | CCDG | 6 cut(s) | 74, 200, 227, 313, 363, 390 |
| LweI | GCATC | 1 cut(s) | 264 |
| MaeII | ACGT | 1 cut(s) | 147 |
| MaeIII | GTNAC | 3 cut(s) | 29, 90, 106 |
| MalI | GATC | 1 cut(s) | 194 |
| MboI | GATC | 1 cut(s) | 192 |
| MboII | GAAGA | 4 cut(s) | 115, 323, 326, 335 |
| MluCI | AATT | 3 cut(s) | 247, 252, 422 |
| MlyI | GAGTC | 2 cut(s) | 77, 98 |
| MmeI | TCCRAC | 2 cut(s) | 150, 267 |
| MnlI | CCTC | 8 cut(s) | 166, 221, 278, 281, 312, 393, 399, 450 |
| MseI | TTAA | 2 cut(s) | 419, 451 |
| MspR9I | CCNGG | 2 cut(s) | 215, 378 |
| MvaI | CCWGG | 2 cut(s) | 215, 378 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 182, 382, 391 |
| NdeII | GATC | 1 cut(s) | 192 |
| NlaIV | GGNNCC | 2 cut(s) | 73, 241 |
| NmuCI | GTSAC | 1 cut(s) | 90 |
| PceI | AGGCCT | 1 cut(s) | 176 |
| PcsI | WCGNNNNNNNCGW | 4 cut(s) | 75, 84, 135, 144 |
| PfeI | GAWTC | 2 cut(s) | 66, 203 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 377 |
| PleI | GAGTC | 2 cut(s) | 77, 97 |
| PpsI | GAGTC | 2 cut(s) | 77, 97 |
| Psp6I | CCWGG | 2 cut(s) | 213, 376 |
| PspGI | CCWGG | 2 cut(s) | 213, 376 |
| PspN4I | GGNNCC | 2 cut(s) | 73, 241 |
| PspPI | GGNCC | 2 cut(s) | 240, 368 |
| SalI | GTCGAC | 1 cut(s) | 80 |
| SaqAI | TTAA | 2 cut(s) | 419, 451 |
| Sau3AI | GATC | 1 cut(s) | 192 |
| Sau96I | GGNCC | 2 cut(s) | 240, 368 |
| SchI | GAGTC | 2 cut(s) | 77, 98 |
| ScrFI | CCNGG | 2 cut(s) | 215, 378 |
| SetI | ASST | 5 cut(s) | 150, 370, 396, 442, 451 |
| SfaNI | GCATC | 1 cut(s) | 264 |
| SinI | GGWCC | 2 cut(s) | 240, 368 |
| SmlI | CTYRAG | 1 cut(s) | 95 |
| SmoI | CTYRAG | 1 cut(s) | 95 |
| Sse9I | AATT | 3 cut(s) | 247, 252, 422 |
| SseBI | AGGCCT | 1 cut(s) | 176 |
| SsiI | CCGC | 1 cut(s) | 237 |
| StuI | AGGCCT | 1 cut(s) | 176 |
| StyD4I | CCNGG | 2 cut(s) | 213, 376 |
| StyI | CCWWGG | 1 cut(s) | 364 |
| TaiI | ACGT | 1 cut(s) | 150 |
| TaqI | TCGA | 3 cut(s) | 81, 206, 398 |
| TasI | AATT | 3 cut(s) | 247, 252, 422 |
| TfiI | GAWTC | 2 cut(s) | 66, 203 |
| Tru1I | TTAA | 2 cut(s) | 419, 451 |
| Tru9I | TTAA | 2 cut(s) | 419, 451 |
| TseFI | GTSAC | 1 cut(s) | 90 |
| Tsp45I | GTSAC | 1 cut(s) | 90 |
| TspGWI | ACGGA | 1 cut(s) | 255 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 377 |
| VpaK11BI | GGWCC | 2 cut(s) | 240, 368 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 221 |
| XmiI | GTMKAC | 2 cut(s) | 81, 141 |