pycom10g28510
ERF Family

Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr10
Physical Location & Seq
Reverse (-)
29096779 .. 29098355
1577 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom10g28510.1

Sequence Viewer

Length: 1065 bp
ATGGAGGGAGGAGGACACCCGCCTGCTAGCAAGACAGAGTTCACAGAGTGTTGGAGGACAACATGGAAGACGCCGTACATTATGCGTCTTGCTCTCTCTGCTGGCATTGGAGGCCTCCTTTTCGGATACGATACAGGTGTGATTTCTGGTGCATTACTGTACATTCGCGAGGACTTTCACGAAGTCGCCAAGAAAACATGGCTGCAAGAAACCATAGTGAGTATGGCAGTTGCAGGGGCAATCATTGGTGCTGCAATTGGCGGATGGATGAACGATGCCCTAGGCCGGAAAAAATCAATCCTAGCAGCAGATTTTGTGTTCTTCATTGGAGCAATAGTAATGGCTGTTGCACCAGCTCCGTGGGTGATCATAATTGGGAGAATTCTGGTCGGTTTGGGAGTTGGAATGGCTTCCATGACCTCGCCGCTCTACATCTCAGAAGCCTCTCCTGCTAGAATCCGAGGAGCCCTTGTCAGTACAAATGGTTTTCTTATCACTGGAGGACAGTTCTTGTCATACCTTATCAATCTTGCCTTCACTAAGGCTCCAGGAACCTGGCGTTGGATGTTCGGCGTAGCAGGAGTTCCGGCTTTGGTACAATTTGTATTGATGTTGTCACTCCCAGAGTCTCCCAGGTGGCTCTACAGAGAGAATAAGGCAGATGAGGCTAGGGCCATCTTAGAGAAAATTTATCCTGCCGAAGAAGTTGAGCGTGAAATGCAAGCCTTGCATGAATCCGTCCAAGCTGAAAAGGCCGAGGAGGGAGCTGCTGGAGGTGTGCTAGCAAGGTTAAAGGGTGCCCTCAACAACCCCGTTGTCCGAAGAGGACTCTATGCAGGCATCACTGTCCAAGTGGCTCAACAGTTTGTCGGTATCAACACTGTCATGTACTACAGCCCTACTATTGTTCAGTTTGCTGGGTTTGCATCTAACCAGACTGCGTTGGCACTCTCTCTGATCACTTCAGGACTCAACGTGGTTGGCACTGTCATCAGCATGTGCTTCATAGATAGATACGGAAGGAGAAGGCTGATGATTATCTCCATGATTGGGATCGATCACTAG

Protein Analysis

355

Amino Acids

38.24

Weight (kDa)

9.0

Isoelectric Point (pI)

35.56

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Sugar_tr PF00083 31 - 351 1.6e-89 Sugar (and other) transporter
MFS_1 PF07690 36 - 351 1.4e-30 Major Facilitator Superfamily
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 797
AccBSI CCGCTC 1 cut(s) 427
AccII CGCG 1 cut(s) 168
AciI CCGC 3 cut(s) 20, 261, 425
AclWI GGATC 1 cut(s) 1061
AcsI RAATTY 2 cut(s) 381, 687
AcuI CTGAAG 1 cut(s) 948
AcyI GRCGYC 1 cut(s) 71
AdeI CACNNNGTG 1 cut(s) 48
AfaI GTAC 5 cut(s) 77, 161, 478, 597, 890
AfiI CCNNNNNNNGG 3 cut(s) 285, 561, 1050
AjnI CCWGG 3 cut(s) 547, 554, 632
AjuI GAANNNNNNNTTGG 2 cut(s) 544, 576
AluBI AGCT 3 cut(s) 356, 746, 767
AluI AGCT 3 cut(s) 356, 746, 767
Alw26I GTCTC 1 cut(s) 633
AlwI GGATC 1 cut(s) 1061
AoxI GGCC 4 cut(s) 112, 283, 672, 753
ApeKI GCWGC 4 cut(s) 202, 251, 305, 767
ApoI RAATTY 2 cut(s) 381, 687
Asp700I GAANNNNTTC 1 cut(s) 409
AspA2I CCTAGG 1 cut(s) 280
AspS9I GGNCC 1 cut(s) 672
AsuHPI GGTGA 1 cut(s) 376
AsuNHI GCTAGC 2 cut(s) 26, 781
AvrII CCTAGG 1 cut(s) 280
BaeGI GKGCMC 1 cut(s) 802
BaeI ACNNNNGTAYC 2 cut(s) 123, 156
BanI GGYRCC 1 cut(s) 797
BanII GRGCYC 1 cut(s) 469
BarI GAAGNNNNNNTAC 2 cut(s) 59, 91
BbsI GAAGAC 1 cut(s) 74
BbvI GCAGC 4 cut(s) 189, 238, 317, 754
BccI CCATC 2 cut(s) 258, 683
BceAI ACGGC 1 cut(s) 58
BciT130I CCWGG 3 cut(s) 549, 556, 634
BciVI GTATCC 1 cut(s) 119
BclI TGATCA 2 cut(s) 366, 957
BcoDI GTCTC 1 cut(s) 633
BfaI CTAG 7 cut(s) 27, 281, 302, 453, 669, 782, 1063
BfmI CTRYAG 2 cut(s) 643, 892
BfuI GTATCC 1 cut(s) 119
BisI GCNGC 5 cut(s) 203, 252, 306, 425, 768
BlnI CCTAGG 1 cut(s) 280
BlsI GCNGC 5 cut(s) 204, 253, 307, 426, 769
Bme1390I CCNGG 3 cut(s) 549, 556, 634
BmgT120I GGNCC 1 cut(s) 672
BmiI GGNNCC 4 cut(s) 466, 546, 553, 799
BmrFI CCNGG 3 cut(s) 549, 556, 634
BmsI GCATC 3 cut(s) 265, 849, 935
BmtI GCTAGC 2 cut(s) 30, 785
BpiI GAAGAC 1 cut(s) 74
BpmI CTGGAG 3 cut(s) 519, 531, 792
Bsa29I ATCGAT 1 cut(s) 1056
BsaBI GATNNNNATC 2 cut(s) 1037, 1052
BsaHI GRCGYC 1 cut(s) 71
BsaJI CCNNGG 5 cut(s) 280, 359, 460, 632, 756
BsaXI ACNNNNNCTCC 6 cut(s) 321, 351, 456, 486, 529, 559
Bsc4I CCNNNNNNNGG 3 cut(s) 285, 561, 1050
Bse1I ACTGG 1 cut(s) 502
Bse8I GATNNNNATC 2 cut(s) 1037, 1052
BseBI CCWGG 3 cut(s) 549, 556, 634
BseCI ATCGAT 1 cut(s) 1056
BseDI CCNNGG 5 cut(s) 280, 359, 460, 632, 756
BseGI GGATG 3 cut(s) 269, 273, 570
BseJI GATNNNNATC 2 cut(s) 1037, 1052
BseLI CCNNNNNNNGG 3 cut(s) 285, 561, 1050
BseMII CTCAG 1 cut(s) 450
BseNI ACTGG 1 cut(s) 502
BseRI GAGGAG 3 cut(s) 24, 477, 773
BseSI GKGCMC 1 cut(s) 802
BseXI GCAGC 4 cut(s) 189, 238, 317, 754
BseYI CCCAGC 1 cut(s) 917
Bsh1236I CGCG 1 cut(s) 168
BshFI GGCC 4 cut(s) 114, 285, 674, 755
BshNI GGYRCC 1 cut(s) 797
BshVI ATCGAT 1 cut(s) 1056
BsiSI CCGG 2 cut(s) 286, 587
BslI CCNNNNNNNGG 3 cut(s) 285, 561, 1050
BsmAI GTCTC 1 cut(s) 633
BsnI GGCC 4 cut(s) 114, 285, 674, 755
Bsp1286I GDGCHC 2 cut(s) 469, 802
Bsp1407I TGTACA 1 cut(s) 159
Bsp143I GATC 4 cut(s) 366, 957, 1053, 1057
Bsp68I TCGCGA 1 cut(s) 168
BspACI CCGC 3 cut(s) 20, 261, 425
BspANI GGCC 4 cut(s) 114, 285, 674, 755
BspCNI CTCAG 1 cut(s) 449
BspDI ATCGAT 1 cut(s) 1056
BspFNI CGCG 1 cut(s) 168
BspLI GGNNCC 4 cut(s) 466, 546, 553, 799
BspOI GCTAGC 2 cut(s) 30, 785
BspPI GGATC 1 cut(s) 1061
BspT107I GGYRCC 1 cut(s) 797
BsrBI CCGCTC 1 cut(s) 427
BsrGI TGTACA 1 cut(s) 159
BsrI ACTGG 1 cut(s) 502
BssECI CCNNGG 5 cut(s) 280, 359, 460, 632, 756
BssMI GATC 4 cut(s) 366, 957, 1053, 1057
BssNI GRCGYC 1 cut(s) 71
BssT1I CCWWGG 1 cut(s) 280
Bst2UI CCWGG 3 cut(s) 549, 556, 634
Bst4CI ACNGT 6 cut(s) 159, 507, 847, 864, 883, 988
Bst6I CTCTTC 1 cut(s) 817
BstACI GRCGYC 1 cut(s) 71
BstAPI GCANNNNNTGC 1 cut(s) 727
BstAUI TGTACA 1 cut(s) 159
BstC8I GCNNGC 6 cut(s) 24, 28, 103, 723, 783, 838
BstDEI CTNAG 3 cut(s) 436, 540, 679
BstDSI CCRYGG 1 cut(s) 359
BstF5I GGATG 3 cut(s) 269, 273, 570
BstFNI CGCG 1 cut(s) 168
BstKTI GATC 4 cut(s) 369, 960, 1056, 1060
BstMAI GTCTC 1 cut(s) 633
BstMBI GATC 4 cut(s) 366, 957, 1053, 1057
BstMWI GCNNNNNNNGC 8 cut(s) 98, 111, 449, 665, 718, 727, 752, 923
BstNI CCWGG 3 cut(s) 549, 556, 634
BstNSI RCATGY 1 cut(s) 1000
BstSCI CCNGG 3 cut(s) 547, 554, 632
BstSFI CTRYAG 2 cut(s) 643, 892
BstSLI GKGCMC 1 cut(s) 802
BstUI CGCG 1 cut(s) 168
BstV1I GCAGC 4 cut(s) 189, 238, 317, 754
BstV2I GAAGAC 1 cut(s) 74
BstXI CCANNNNNNTGG 2 cut(s) 360, 555
Bsu15I ATCGAT 1 cut(s) 1056
BsuI GTATCC 1 cut(s) 119
BsuRI GGCC 4 cut(s) 114, 285, 674, 755
BsuTUI ATCGAT 1 cut(s) 1056
BtgI CCRYGG 1 cut(s) 359
BtsCI GGATG 3 cut(s) 269, 273, 570
BtsIMutI CAGTG 4 cut(s) 495, 843, 879, 984
BtuMI TCGCGA 1 cut(s) 168
Cac8I GCNNGC 6 cut(s) 24, 28, 103, 723, 783, 838
Cfr13I GGNCC 1 cut(s) 672
ClaI ATCGAT 1 cut(s) 1056
CseI GACGC 2 cut(s) 74, 79
Csp6I GTAC 5 cut(s) 76, 160, 477, 596, 889
CviAII CATG 7 cut(s) 63, 198, 415, 731, 886, 997, 1045
CviQI GTAC 5 cut(s) 76, 160, 477, 596, 889
DdeI CTNAG 3 cut(s) 436, 540, 679
DpnI GATC 4 cut(s) 368, 959, 1055, 1059
DpnII GATC 4 cut(s) 366, 957, 1053, 1057
DraIII CACNNNGTG 1 cut(s) 48
Eam1104I CTCTTC 1 cut(s) 817
EarI CTCTTC 1 cut(s) 817
EciI GGCGGA 1 cut(s) 276
Eco130I CCWWGG 1 cut(s) 280
Eco147I AGGCCT 1 cut(s) 114
Eco24I GRGCYC 1 cut(s) 469
Eco57I CTGAAG 1 cut(s) 948
EcoRI GAATTC 1 cut(s) 381
EcoRII CCWGG 3 cut(s) 547, 554, 632
EcoT14I CCWWGG 1 cut(s) 280
EcoT38I GRGCYC 1 cut(s) 469
ErhI CCWWGG 1 cut(s) 280
FaeI CATG 7 cut(s) 66, 201, 418, 734, 889, 1000, 1048
FatI CATG 7 cut(s) 62, 197, 414, 730, 885, 996, 1044
FauI CCCGC 1 cut(s) 27
FbaI TGATCA 2 cut(s) 366, 957
Fnu4HI GCNGC 5 cut(s) 203, 252, 306, 425, 768
FokI GGATG 3 cut(s) 276, 280, 577
FriOI GRGCYC 1 cut(s) 469
Fsp4HI GCNGC 5 cut(s) 203, 252, 306, 425, 768
FspBI CTAG 7 cut(s) 27, 281, 302, 453, 669, 782, 1063
GluI GCNGC 5 cut(s) 203, 252, 306, 425, 768
GsaI CCCAGC 1 cut(s) 921
GsuI CTGGAG 3 cut(s) 519, 531, 792
HaeIII GGCC 4 cut(s) 114, 285, 674, 755
HapII CCGG 2 cut(s) 286, 587
HgaI GACGC 2 cut(s) 74, 79
Hin1I GRCGYC 1 cut(s) 71
Hin1II CATG 7 cut(s) 66, 201, 418, 734, 889, 1000, 1048
HinfI GANTC 5 cut(s) 456, 626, 734, 828, 969
HpaII CCGG 2 cut(s) 286, 587
HphI GGTGA 1 cut(s) 376
Hpy166II GTNNAC 1 cut(s) 42
Hpy188I TCNGA 5 cut(s) 125, 439, 461, 821, 957
Hpy188III TCNNGA 3 cut(s) 167, 179, 966
Hpy8I GTNNAC 1 cut(s) 42
HpyAV CCTTC 3 cut(s) 544, 1014, 1020
HpyCH4III ACNGT 6 cut(s) 159, 507, 847, 864, 883, 988
HpyCH4IV ACGT 1 cut(s) 975
HpyCH4V TGCA 9 cut(s) 152, 205, 233, 254, 350, 721, 730, 836, 926
HpyF10VI GCNNNNNNNGC 8 cut(s) 98, 111, 449, 665, 718, 727, 752, 923
HpyF3I CTNAG 3 cut(s) 436, 540, 679
HpySE526I ACGT 1 cut(s) 975
Hsp92I GRCGYC 1 cut(s) 71
Hsp92II CATG 7 cut(s) 66, 201, 418, 734, 889, 1000, 1048
Ksp22I TGATCA 2 cut(s) 366, 957
Kzo9I GATC 4 cut(s) 366, 957, 1053, 1057
LmnI GCTCC 5 cut(s) 329, 361, 464, 550, 764
Lsp1109I GCAGC 4 cut(s) 189, 238, 317, 754
LweI GCATC 3 cut(s) 265, 849, 935
MaeI CTAG 7 cut(s) 27, 281, 302, 453, 669, 782, 1063
MaeII ACGT 1 cut(s) 975
MaeIII GTNAC 1 cut(s) 615
MalI GATC 4 cut(s) 368, 959, 1055, 1059
MbiI CCGCTC 1 cut(s) 427
MboI GATC 4 cut(s) 366, 957, 1053, 1057
MboII GAAGA 4 cut(s) 79, 313, 713, 834
MfeI CAATTG 1 cut(s) 255
MhlI GDGCHC 2 cut(s) 469, 802
MluCI AATT 5 cut(s) 255, 372, 381, 599, 687
MlyI GAGTC 3 cut(s) 635, 822, 963
MmeI TCCRAC 3 cut(s) 32, 382, 542
MroXI GAANNNNTTC 1 cut(s) 409
MseI TTAA 1 cut(s) 791
MslI CAYNNNNRTG 2 cut(s) 884, 995
MspI CCGG 2 cut(s) 286, 587
MspR9I CCNGG 3 cut(s) 549, 556, 634
MunI CAATTG 1 cut(s) 255
MvaI CCWGG 3 cut(s) 549, 556, 634
MvnI CGCG 1 cut(s) 168
MwoI GCNNNNNNNGC 8 cut(s) 98, 111, 449, 665, 718, 727, 752, 923
NdeII GATC 4 cut(s) 366, 957, 1053, 1057
NheI GCTAGC 2 cut(s) 26, 781
NlaIII CATG 7 cut(s) 66, 201, 418, 734, 889, 1000, 1048
NlaIV GGNNCC 4 cut(s) 466, 546, 553, 799
NmeAIII GCCGAG 1 cut(s) 781
NmuCI GTSAC 1 cut(s) 615
NruI TCGCGA 1 cut(s) 168
NspI RCATGY 1 cut(s) 1000
PceI AGGCCT 1 cut(s) 114
PdmI GAANNNNTTC 1 cut(s) 409
PfeI GAWTC 2 cut(s) 456, 734
PfoI TCCNGGA 1 cut(s) 547
PkrI GCNGC 5 cut(s) 204, 253, 307, 426, 769
PleI GAGTC 3 cut(s) 634, 822, 963
PpsI GAGTC 3 cut(s) 634, 822, 963
Psp6I CCWGG 3 cut(s) 547, 554, 632
PspFI CCCAGC 1 cut(s) 917
PspGI CCWGG 3 cut(s) 547, 554, 632
PspN4I GGNNCC 4 cut(s) 466, 546, 553, 799
PspPI GGNCC 1 cut(s) 672
PsrI GAACNNNNNNTAC 2 cut(s) 567, 599
RruI TCGCGA 1 cut(s) 168
RsaI GTAC 5 cut(s) 77, 161, 478, 597, 890
RsaNI GTAC 5 cut(s) 76, 160, 477, 596, 889
RseI CAYNNNNRTG 2 cut(s) 884, 995
SaqAI TTAA 1 cut(s) 791
SatI GCNGC 5 cut(s) 203, 252, 306, 425, 768
Sau3AI GATC 4 cut(s) 366, 957, 1053, 1057
Sau96I GGNCC 1 cut(s) 672
SchI GAGTC 3 cut(s) 635, 822, 963
ScrFI CCNGG 3 cut(s) 549, 556, 634
SduI GDGCHC 2 cut(s) 469, 802
SfaNI GCATC 3 cut(s) 265, 849, 935
SfcI CTRYAG 2 cut(s) 643, 892
SmiMI CAYNNNNRTG 2 cut(s) 884, 995
Sse9I AATT 5 cut(s) 255, 372, 381, 599, 687
SseBI AGGCCT 1 cut(s) 114
SsiI CCGC 3 cut(s) 20, 261, 425
SspMI CTAG 7 cut(s) 27, 281, 302, 453, 669, 782, 1063
StuI AGGCCT 1 cut(s) 114
StyD4I CCNGG 3 cut(s) 547, 554, 632
StyI CCWWGG 1 cut(s) 280
TaaI ACNGT 6 cut(s) 159, 507, 847, 864, 883, 988
TaiI ACGT 1 cut(s) 978
TaqI TCGA 1 cut(s) 1056
TasI AATT 5 cut(s) 255, 372, 381, 599, 687
TatI WGTACW 3 cut(s) 159, 476, 888
TauI GCSGC 1 cut(s) 427
TfiI GAWTC 2 cut(s) 456, 734
Tru1I TTAA 1 cut(s) 791
Tru9I TTAA 1 cut(s) 791
TscAI CASTG 4 cut(s) 502, 850, 886, 991
TseFI GTSAC 1 cut(s) 615
TseI GCWGC 4 cut(s) 202, 251, 305, 767
Tsp45I GTSAC 1 cut(s) 615
TspDTI ATGAA 4 cut(s) 284, 313, 747, 994
TspGWI ACGGA 3 cut(s) 348, 727, 1032
TspRI CASTG 4 cut(s) 502, 850, 886, 991
XapI RAATTY 2 cut(s) 381, 687
XceI RCATGY 1 cut(s) 1000
XcmI CCANNNNNNNNNTGG 1 cut(s) 220
XmaJI CCTAGG 1 cut(s) 280
XmnI GAANNNNTTC 1 cut(s) 409
XspI CTAG 7 cut(s) 27, 281, 302, 453, 669, 782, 1063
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.