Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000001

Orthogroup ID

OG0000711

Physical Location & Seq

Genomic Coordinates Reverse (-)

96084427 .. 96086546

Gene Structure 2120 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_1G00075280.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1665 bp

ATGCGCCTCGCGCTCTCTGCCGGCATTGGAGGCCTTCTTTTTGGATATGACACAGGTGTCATTTCTGGGGCGCTGCTATACATTCGTGAGGACTTTGACGAAGTTGACAAGAAAACATGGCTGCAAGAAACCATTGTGAGTATGGCAGTTGCAGGCGCTATCATTGGTGCTGCAATCGGAGGATGGATGAACGATGCCCTCGGCCGCAAGAAATCAATACTAATAGCAGATGTGGTGTTCTTTGTGGGTGCAATAGTTATGGCAGTGGCTCCAGCTCCTTGGGTGATCATCATTGGAAGAATCATAGTTGGTTTGGGAGTTGGAATGGCTTCCATGACCGCACCCCTTTACATTTCAGAAGCCTCTCCTCATAGAATCAGAGGAGCTCTTGTTAGTACAAATGGTCTTCTCATCACAGGAGGTCAGTTTTTGTCATACCTCATCAATCTGGCATTCACCAAGGCTCCAGGAACATGGCGTTGGATGCTTGGAGTTGCCGGTCTACCAGCTGTCGTTCAGTTTGTTTTGATGTTGTCACTCCCTGAGTCTCCAAGATGGCTCTACCGAGATAACAAGGTTGACGAAGCTAGGGCCATCTTAGCTAAAATCTACCCTCCAGAAGAGGTTGATGATGAAATGAAGGCCTTGCATGAATCCGTCGAATTCGAAAAGTCTGAGGAAGGAGCTATTGGGAAAACCATGATCGAAAAACTAAAGAGTTGTTTCGGCAACACCGTGGTCCGAAGAGGACTCTATGCAGGGATCACAGTCCAAGTCGCTCAGCAATTTGTGGGTATCAACACTGTCATGTATTACAGCCCAACCATAGTTCAATTTGCTGGATTCGCATCCAACCAAACGGCTATGGCACTTTCTCTCATCACTTCTGGCCTCAATGTGGTTGGCACACTCATCAGCATGTGCTTTGTGGATAGATATGGAAGGAGAAGGCTCATGATCATTTCCATGTTAGGAATCATCAGTTGCCTTATCGTGTTAGCTGGAGTGTTCTTCTATGCCGCATCTCATTCTCCAACTGTTAGCCACTTGGAATCCAATCACTTTGGCACCAACACTACATGTCCAGCTTATGTTTCTGCTACTAATCCTGCAGCATGGAACTGCATGACATGCTTGAAATCAACAGAATGCGCCTTCTGTGCTAGTAAAGTTGAAAATCTTGCCCCGGGAGCTTGTTTGGCTGCAAATGATAACATAAGGAGTCAATGTCGTGGAGAACATAGGGTATGGTACTCTAAAGGGTGTCCTAGCAAAATTGGTATCTTTGCAGTCATTTTGTTGGGATTGTACATCATTGTGTATGCACCTGGAATGGGAACTATTCCCTGGATTGTGAACTCAGAGATTTACCCATTGAGATACAGAGGCACCGGTGGAGGGATTGCTGCAGTTTCCAACTGGACTGCAAATCTCATAGTGAGTGAGACATACTTGACCCTCACCAAGGAACTGGGTTCGGCTGGAACTTTCCTCCTATTTGCTGGGTTTTCTACCATCGGGCTTATATTCATTTACTTCCTGGTTCCTGAAACCAAAGGAATGCAATTCGAAGAGGTCGAGAAGTTGCTTCAGAAGGGTTTCCGACCTAAGTTATTTGCTCCAAAGGACACCAAAGGCAAGCAGAAGGTTGAGGGGTCTGCTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005215 GO:0005351 GO:0005355 GO:0005402 GO:0005575 GO:0005623 GO:0005886 GO:0006810 GO:0006811 GO:0006812 GO:0008150 GO:0008324 GO:0008643 GO:0008645 GO:0015075 GO:0015077 GO:0015078 GO:0015144 GO:0015145 GO:0015149 GO:0015291 GO:0015293 GO:0015294 GO:0015295 GO:0015318 GO:0015672 GO:0015749 GO:0016020 GO:0022804 GO:0022857 GO:0022890 GO:0034219 GO:0034220 GO:0044464 GO:0046323 GO:0051119 GO:0051179 GO:0051234 GO:0055085 GO:0071702 GO:0071944 GO:0098655 GO:0098660 GO:0098662 GO:1902600 GO:1904659

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Sugar_tr

Protein Analysis

554

Amino Acids

59.87

Weight (kDa)

8.72

Isoelectric Point (pI)

32.81

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Sugar_tr	PF00083	4 - 343	7.8e-94	Sugar (and other) transporter
MFS_1	PF07690	9 - 340	2.3e-31	Major Facilitator Superfamily
Sugar_tr	PF00083	424 - 529	1.4e-27	Sugar (and other) transporter

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000711)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G35740 AT4G16480 AT4G16480 AT4G16480
fragaria_vesca	FvH4_3g00750 FvH4_3g00750 FvH4_3g00750 FvH4_3g00750 FvH4_3g00750 FvH4_3g00750 FvH4_3g00750 FvH4_3g00750 FvH4_3g00750 FvH4_3g00750 FvH4_3g00760
malus_domestica	MD05G1108700.v1.1 MD05G1359700.v1.1 MD05G1359900.v1.1 MD10G1335300.v1.1 MD10G1335500.v1.1
prunus_persica	Prupe.4G008300_v2.0.a1 Prupe.4G008300_v2.0.a1 Prupe.4G008400_v2.0.a1
pyrus_communis	pycom05g32480 pycom05g32490 pycom10g28510
rosa_chinensis	RchiOBHm_Chr1g0370501 RchiOBHm_Chr4g0424641 RchiOBHm_Chr5g0000981 RchiOBHm_Chr5g0001001 RchiOBHm_Chr7g0190531
rosa_laevigata	RLG00000004519 RLG00000030911 RLG00000030912
rosa_multiflora	Rmu_co8357507.1_g000001 Rmu_co8503263.1_g000001 Rmu_sc0000255.1_g000023 Rmu_sc0000255.1_g000024 Rmu_sc0002558.1_g000005 Rmu_sc0007329.1_g000007
rosa_roxburghii	Rroxscaffold_1G00075280 Rroxscaffold_1G00075290 Rroxscaffold_3G00264530
rosa_rugosa	Rorug04G0198700 Rorug04G0388100 Rorug04G0388200 Rorug04G0388300 Rorug04G0388400 Rorug04G0388500 Rorug04G0388600 Rorug04G0388700 Rorug04G0388800
rosa_samantha	Rh1AG366200 Rh1BG329000 Rh1CG342600 Rh1DG359300 Rh1DG360000 Rh4AG255600 Rh4BG261000 Rh4CG272100 Rh4DG255600 Rh5AG007800 Rh5AG007900 Rh5BG010000 Rh5BG010100 Rh5CG008500 Rh5CG008600 Rh5DG008500 Rh5DG008600
rosa_wichuraiana	Rw1G032250 Rw5G000810 Rw5G000820 Rw7G009720

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	56
AccB1I	GGYRCC	2 cut(s)	1067, 1388
AccI	GTMKAC	1 cut(s)	502
AccII	CGCG	1 cut(s)	11
AciI	CCGC	3 cut(s)	205, 339, 1020
AclWI	GGATC	1 cut(s)	770
AcoI	YGGCCR	1 cut(s)	202
AcsI	RAATTY	1 cut(s)	662
AcuI	CTGAAG	1 cut(s)	1574
AfaI	GTAC	3 cut(s)	397, 1253, 1310
AfiI	CCNNNNNNNGG	4 cut(s)	898, 1334, 1398, 1465
AflIII	ACRYGT	1 cut(s)	1079
AgeI	ACCGGT	1 cut(s)	1391
AgsI	TTSAA	3 cut(s)	833, 1138, 1175
AjnI	CCWGG	4 cut(s)	466, 1327, 1346, 1539
AjuI	GAANNNNNNNTTGG	4 cut(s)	463, 495, 672, 704
AluBI	AGCT	9 cut(s)	275, 386, 509, 587, 602, 686, 1001, 1088, 1193
AluI	AGCT	9 cut(s)	275, 386, 509, 587, 602, 686, 1001, 1088, 1193
Alw21I	GWGCWC	1 cut(s)	388
Alw26I	GTCTC	2 cut(s)	552, 1439
AlwI	GGATC	1 cut(s)	770
Ama87I	CYCGRG	1 cut(s)	1186
AoxI	GGCC	5 cut(s)	31, 202, 591, 642, 889
ApeKI	GCWGC	6 cut(s)	73, 121, 170, 1112, 1202, 1406
ApoI	RAATTY	1 cut(s)	662
AsiGI	ACCGGT	1 cut(s)	1391
Asp700I	GAANNNNTTC	2 cut(s)	328, 1598
AspLEI	GCGC	5 cut(s)	6, 13, 73, 158, 1154
AspS9I	GGNCC	2 cut(s)	591, 739
AsuC2I	CCSGG	2 cut(s)	1187, 1188
AsuHPI	GGTGA	3 cut(s)	295, 448, 1453
AsuII	TTCGAA	2 cut(s)	666, 1569
AvaI	CYCGRG	1 cut(s)	1186
AvaII	GGWCC	1 cut(s)	739
BanI	GGYRCC	2 cut(s)	1067, 1388
BanII	GRGCYC	1 cut(s)	388
BbsI	GAAGAC	1 cut(s)	398
Bbv12I	GWGCWC	1 cut(s)	388
BbvI	GCAGC	6 cut(s)	60, 108, 157, 1124, 1189, 1393
BccI	CCATC	4 cut(s)	177, 549, 602, 1523
BceAI	ACGGC	1 cut(s)	876
BciT130I	CCWGG	4 cut(s)	468, 1329, 1348, 1541
BclI	TGATCA	2 cut(s)	285, 957
BcnI	CCSGG	2 cut(s)	1187, 1188
BcoDI	GTCTC	2 cut(s)	552, 1439
BfaI	CTAG	3 cut(s)	588, 1164, 1269
BfmI	CTRYAG	2 cut(s)	1110, 1407
BfoI	RGCGCY	2 cut(s)	74, 159
BisI	GCNGC	8 cut(s)	74, 122, 171, 205, 1020, 1113, 1203, 1407
BlpI	GCTNAGC	1 cut(s)	780
BlsI	GCNGC	8 cut(s)	75, 123, 172, 206, 1021, 1114, 1204, 1408
Bme1390I	CCNGG	6 cut(s)	468, 1187, 1188, 1329, 1348, 1541
Bme18I	GGWCC	1 cut(s)	739
BmeT110I	CYCGRG	1 cut(s)	1186
BmgT120I	GGNCC	2 cut(s)	591, 739
BmiI	GGNNCC	5 cut(s)	270, 465, 1069, 1390, 1545
BmrFI	CCNGG	6 cut(s)	468, 1187, 1188, 1329, 1348, 1541
BmrI	ACTGGG	1 cut(s)	1481
BmsI	GCATC	4 cut(s)	184, 474, 857, 1031
BmuI	ACTGGG	1 cut(s)	1481
BpiI	GAAGAC	1 cut(s)	398
BpmI	CTGGAG	4 cut(s)	255, 450, 600, 1023
Bpu1102I	GCTNAGC	1 cut(s)	780
Bpu14I	TTCGAA	2 cut(s)	666, 1569
BpuMI	CCSGG	2 cut(s)	1187, 1188
BsaBI	GATNNNNATC	1 cut(s)	847
BsaJI	CCNNGG	8 cut(s)	199, 278, 459, 735, 1185, 1186, 1346, 1464
BsaWI	WCCGGW	1 cut(s)	1391
BsaXI	ACNNNNNCTCC	6 cut(s)	375, 405, 448, 478, 1213, 1243
Bsc4I	CCNNNNNNNGG	4 cut(s)	898, 1334, 1398, 1465
Bse118I	RCCGGY	3 cut(s)	20, 497, 1391
Bse1I	ACTGG	2 cut(s)	1424, 1476
Bse8I	GATNNNNATC	1 cut(s)	847
BseBI	CCWGG	4 cut(s)	468, 1329, 1348, 1541
BseDI	CCNNGG	8 cut(s)	199, 278, 459, 735, 1185, 1186, 1346, 1464
BseGI	GGATG	4 cut(s)	188, 192, 489, 848
BseJI	GATNNNNATC	1 cut(s)	847
BseLI	CCNNNNNNNGG	4 cut(s)	898, 1334, 1398, 1465
BseMII	CTCAG	4 cut(s)	534, 666, 794, 1374
BseNI	ACTGG	2 cut(s)	1424, 1476
BseRI	GAGGAG	2 cut(s)	357, 396
BseX3I	CGGCCG	1 cut(s)	202
BseXI	GCAGC	6 cut(s)	60, 108, 157, 1124, 1189, 1393
BseYI	CCCAGC	1 cut(s)	1502
Bsh1236I	CGCG	1 cut(s)	11
Bsh1285I	CGRYCG	1 cut(s)	205
BshFI	GGCC	5 cut(s)	33, 204, 593, 644, 891
BshNI	GGYRCC	2 cut(s)	1067, 1388
BshTI	ACCGGT	1 cut(s)	1391
BsiEI	CGRYCG	1 cut(s)	205
BsiHKAI	GWGCWC	1 cut(s)	388
BsiHKCI	CYCGRG	1 cut(s)	1186
BsiSI	CCGG	4 cut(s)	21, 498, 1187, 1392
BslI	CCNNNNNNNGG	4 cut(s)	898, 1334, 1398, 1465
BsmAI	GTCTC	2 cut(s)	552, 1439
BsmI	GAATGC	3 cut(s)	452, 1154, 1566
BsnI	GGCC	5 cut(s)	33, 204, 593, 644, 891
BsoBI	CYCGRG	1 cut(s)	1186
Bsp119I	TTCGAA	2 cut(s)	666, 1569
Bsp1286I	GDGCHC	1 cut(s)	388
Bsp1407I	TGTACA	1 cut(s)	1308
Bsp143I	GATC	4 cut(s)	285, 702, 762, 957
Bsp1720I	GCTNAGC	1 cut(s)	780
BspACI	CCGC	3 cut(s)	205, 339, 1020
BspANI	GGCC	5 cut(s)	33, 204, 593, 644, 891
BspCNI	CTCAG	4 cut(s)	535, 667, 793, 1373
BspFNI	CGCG	1 cut(s)	11
BspHI	TCATGA	1 cut(s)	954
BspLI	GGNNCC	5 cut(s)	270, 465, 1069, 1390, 1545
BspMAI	CTGCAG	2 cut(s)	1114, 1411
BspPI	GGATC	1 cut(s)	770
BspT104I	TTCGAA	2 cut(s)	666, 1569
BspT107I	GGYRCC	2 cut(s)	1067, 1388
BsrFI	RCCGGY	3 cut(s)	20, 497, 1391
BsrGI	TGTACA	1 cut(s)	1308
BsrI	ACTGG	2 cut(s)	1424, 1476
BssAI	RCCGGY	3 cut(s)	20, 497, 1391
BssECI	CCNNGG	8 cut(s)	199, 278, 459, 735, 1185, 1186, 1346, 1464
BssMI	GATC	4 cut(s)	285, 702, 762, 957
BssT1I	CCWWGG	3 cut(s)	278, 459, 1464
Bst2UI	CCWGG	4 cut(s)	468, 1329, 1348, 1541
Bst4CI	ACNGT	4 cut(s)	736, 769, 805, 1039
Bst6I	CTCTTC	3 cut(s)	615, 739, 1566
BstAPI	GCANNNNNTGC	1 cut(s)	1131
BstAUI	TGTACA	1 cut(s)	1308
BstBI	TTCGAA	2 cut(s)	666, 1569
BstC8I	GCNNGC	3 cut(s)	22, 154, 1640
BstDEI	CTNAG	6 cut(s)	543, 598, 675, 780, 1360, 1608
BstDSI	CCRYGG	1 cut(s)	735
BstENI	CCTNNNNNAGG	1 cut(s)	1463
BstF5I	GGATG	4 cut(s)	188, 192, 489, 848
BstFNI	CGCG	1 cut(s)	11
BstH2I	RGCGCY	2 cut(s)	74, 159
BstHHI	GCGC	5 cut(s)	6, 13, 73, 158, 1154
BstKTI	GATC	4 cut(s)	288, 705, 765, 960
BstMAI	GTCTC	2 cut(s)	552, 1439
BstMBI	GATC	4 cut(s)	285, 702, 762, 957
BstMCI	CGRYCG	1 cut(s)	205
BstNI	CCWGG	4 cut(s)	468, 1329, 1348, 1541
BstNSI	RCATGY	3 cut(s)	922, 1083, 1134
BstSCI	CCNGG	6 cut(s)	466, 1185, 1186, 1327, 1346, 1539
BstSFI	CTRYAG	2 cut(s)	1110, 1407
BstUI	CGCG	1 cut(s)	11
BstV1I	GCAGC	6 cut(s)	60, 108, 157, 1124, 1189, 1393
BstV2I	GAAGAC	1 cut(s)	398
BstXI	CCANNNNNNTGG	3 cut(s)	279, 474, 1471
BstZI	CGGCCG	1 cut(s)	202
BsuRI	GGCC	5 cut(s)	33, 204, 593, 644, 891
BtgI	CCRYGG	1 cut(s)	735
BtsCI	GGATG	4 cut(s)	188, 192, 489, 848
BtsI	GCAGTG	1 cut(s)	270
BtsIMutI	CAGTG	2 cut(s)	270, 801
Cac8I	GCNNGC	3 cut(s)	22, 154, 1640
CciI	TCATGA	1 cut(s)	954
CfoI	GCGC	5 cut(s)	6, 13, 73, 158, 1154
Cfr10I	RCCGGY	3 cut(s)	20, 497, 1391
Cfr13I	GGNCC	2 cut(s)	591, 739
Cfr9I	CCCGGG	1 cut(s)	1186
Csp6I	GTAC	3 cut(s)	396, 1252, 1309
CspAI	ACCGGT	1 cut(s)	1391
CviQI	GTAC	3 cut(s)	396, 1252, 1309
DdeI	CTNAG	6 cut(s)	543, 598, 675, 780, 1360, 1608
DpnI	GATC	4 cut(s)	287, 704, 764, 959
DpnII	GATC	4 cut(s)	285, 702, 762, 957
DrdI	GACNNNNNNGTC	1 cut(s)	56
DseDI	GACNNNNNNGTC	1 cut(s)	56
EaeI	YGGCCR	1 cut(s)	202
EagI	CGGCCG	1 cut(s)	202
Eam1104I	CTCTTC	3 cut(s)	615, 739, 1566
EarI	CTCTTC	3 cut(s)	615, 739, 1566
Ecl136II	GAGCTC	1 cut(s)	386
EclXI	CGGCCG	1 cut(s)	202
Eco130I	CCWWGG	3 cut(s)	278, 459, 1464
Eco147I	AGGCCT	2 cut(s)	33, 644
Eco24I	GRGCYC	1 cut(s)	388
Eco47I	GGWCC	1 cut(s)	739
Eco52I	CGGCCG	1 cut(s)	202
Eco53kI	GAGCTC	1 cut(s)	386
Eco57I	CTGAAG	1 cut(s)	1574
Eco88I	CYCGRG	1 cut(s)	1186
EcoICRI	GAGCTC	1 cut(s)	386
EcoNI	CCTNNNNNAGG	1 cut(s)	1463
EcoRI	GAATTC	1 cut(s)	662
EcoRII	CCWGG	4 cut(s)	466, 1327, 1346, 1539
EcoT14I	CCWWGG	3 cut(s)	278, 459, 1464
EcoT38I	GRGCYC	1 cut(s)	388
ErhI	CCWWGG	3 cut(s)	278, 459, 1464
FbaI	TGATCA	2 cut(s)	285, 957
FblI	GTMKAC	1 cut(s)	502
Fnu4HI	GCNGC	8 cut(s)	74, 122, 171, 205, 1020, 1113, 1203, 1407
FokI	GGATG	4 cut(s)	195, 199, 496, 835
FriOI	GRGCYC	1 cut(s)	388
Fsp4HI	GCNGC	8 cut(s)	74, 122, 171, 205, 1020, 1113, 1203, 1407
FspBI	CTAG	3 cut(s)	588, 1164, 1269
GlaI	GCGC	5 cut(s)	5, 12, 72, 157, 1153
GluI	GCNGC	8 cut(s)	74, 122, 171, 205, 1020, 1113, 1203, 1407
GsaI	CCCAGC	1 cut(s)	1506
GsuI	CTGGAG	4 cut(s)	255, 450, 600, 1023
HaeII	RGCGCY	2 cut(s)	74, 159
HaeIII	GGCC	5 cut(s)	33, 204, 593, 644, 891
HapII	CCGG	4 cut(s)	21, 498, 1187, 1392
HhaI	GCGC	5 cut(s)	6, 13, 73, 158, 1154
Hin6I	GCGC	5 cut(s)	4, 11, 71, 156, 1152
HinP1I	GCGC	5 cut(s)	4, 11, 71, 156, 1152
HincII	GTYRAC	2 cut(s)	106, 580
HindII	GTYRAC	2 cut(s)	106, 580
HinfI	GANTC	9 cut(s)	300, 375, 545, 653, 750, 843, 975, 1052, 1222
HpaII	CCGG	4 cut(s)	21, 498, 1187, 1392
HphI	GGTGA	3 cut(s)	295, 448, 1453
Hpy166II	GTNNAC	4 cut(s)	106, 503, 580, 1357
Hpy188I	TCNGA	8 cut(s)	179, 358, 380, 676, 743, 1363, 1593, 1604
Hpy188III	TCNNGA	5 cut(s)	86, 617, 955, 1547, 1579
Hpy8I	GTNNAC	4 cut(s)	106, 503, 580, 1357
Hpy99I	CGWCG	1 cut(s)	662
HpyAV	CCTTC	8 cut(s)	44, 634, 674, 936, 942, 1165, 1588, 1639
HpyCH4III	ACNGT	4 cut(s)	736, 769, 805, 1039
HpyF3I	CTNAG	6 cut(s)	543, 598, 675, 780, 1360, 1608
HspAI	GCGC	5 cut(s)	4, 11, 71, 156, 1152
KroI	GCCGGC	1 cut(s)	20
KroNI	GCCGGC	1 cut(s)	22
Ksp22I	TGATCA	2 cut(s)	285, 957
Kzo9I	GATC	4 cut(s)	285, 702, 762, 957
LmnI	GCTCC	7 cut(s)	274, 280, 383, 469, 683, 1190, 1624
Lsp1109I	GCAGC	6 cut(s)	60, 108, 157, 1124, 1189, 1393
LweI	GCATC	4 cut(s)	184, 474, 857, 1031
MaeI	CTAG	3 cut(s)	588, 1164, 1269
MaeIII	GTNAC	1 cut(s)	534
MalI	GATC	4 cut(s)	287, 704, 764, 959
MboI	GATC	4 cut(s)	285, 702, 762, 957
MboII	GAAGA	6 cut(s)	309, 398, 632, 756, 1003, 1583
MhlI	GDGCHC	1 cut(s)	388
MluCI	AATT	5 cut(s)	662, 785, 833, 1275, 1565
MlyI	GAGTC	3 cut(s)	554, 744, 1231
MmeI	TCCRAC	6 cut(s)	301, 461, 876, 1058, 1440, 1627
MroNI	GCCGGC	1 cut(s)	20
MroXI	GAANNNNTTC	2 cut(s)	328, 1598
MslI	CAYNNNNRTG	4 cut(s)	806, 917, 965, 1316
MspA1I	CMGCKG	1 cut(s)	509
MspI	CCGG	4 cut(s)	21, 498, 1187, 1392
MspR9I	CCNGG	6 cut(s)	468, 1187, 1188, 1329, 1348, 1541
Mva1269I	GAATGC	3 cut(s)	452, 1154, 1566
MvaI	CCWGG	4 cut(s)	468, 1329, 1348, 1541
MvnI	CGCG	1 cut(s)	11
NaeI	GCCGGC	1 cut(s)	22
NciI	CCSGG	2 cut(s)	1187, 1188
NdeII	GATC	4 cut(s)	285, 702, 762, 957
NgoMIV	GCCGGC	1 cut(s)	20
NlaIV	GGNNCC	5 cut(s)	270, 465, 1069, 1390, 1545
NmeAIII	GCCGAG	1 cut(s)	180
NmuCI	GTSAC	1 cut(s)	534
NspI	RCATGY	3 cut(s)	922, 1083, 1134
NspV	TTCGAA	2 cut(s)	666, 1569
PagI	TCATGA	1 cut(s)	954
PceI	AGGCCT	2 cut(s)	33, 644
PciI	ACATGT	1 cut(s)	1079
PcsI	WCGNNNNNNNCGW	2 cut(s)	732, 1575
PctI	GAATGC	3 cut(s)	452, 1154, 1566
PdiI	GCCGGC	1 cut(s)	22
PdmI	GAANNNNTTC	2 cut(s)	328, 1598
PfeI	GAWTC	6 cut(s)	300, 375, 653, 843, 975, 1052
PfoI	TCCNGGA	1 cut(s)	466
PinAI	ACCGGT	1 cut(s)	1391
PkrI	GCNGC	8 cut(s)	75, 123, 172, 206, 1021, 1114, 1204, 1408
PleI	GAGTC	3 cut(s)	553, 744, 1230
PpsI	GAGTC	3 cut(s)	553, 744, 1230
PscI	ACATGT	1 cut(s)	1079
Psp124BI	GAGCTC	1 cut(s)	388
Psp6I	CCWGG	4 cut(s)	466, 1327, 1346, 1539
PspFI	CCCAGC	1 cut(s)	1502
PspGI	CCWGG	4 cut(s)	466, 1327, 1346, 1539
PspN4I	GGNNCC	5 cut(s)	270, 465, 1069, 1390, 1545
PspPI	GGNCC	2 cut(s)	591, 739
PstI	CTGCAG	2 cut(s)	1114, 1411
PvuII	CAGCTG	1 cut(s)	509
RsaI	GTAC	3 cut(s)	397, 1253, 1310
RsaNI	GTAC	3 cut(s)	396, 1252, 1309
RseI	CAYNNNNRTG	4 cut(s)	806, 917, 965, 1316
SacI	GAGCTC	1 cut(s)	388
SatI	GCNGC	8 cut(s)	74, 122, 171, 205, 1020, 1113, 1203, 1407
Sau3AI	GATC	4 cut(s)	285, 702, 762, 957
Sau96I	GGNCC	2 cut(s)	591, 739
SchI	GAGTC	3 cut(s)	554, 744, 1231
ScrFI	CCNGG	6 cut(s)	468, 1187, 1188, 1329, 1348, 1541
SduI	GDGCHC	1 cut(s)	388
SfaNI	GCATC	4 cut(s)	184, 474, 857, 1031
SfcI	CTRYAG	2 cut(s)	1110, 1407
SfuI	TTCGAA	2 cut(s)	666, 1569
SgrAI	CRCCGGYG	1 cut(s)	1391
SinI	GGWCC	1 cut(s)	739
SmaI	CCCGGG	1 cut(s)	1188
SmiMI	CAYNNNNRTG	4 cut(s)	806, 917, 965, 1316
Sse9I	AATT	5 cut(s)	662, 785, 833, 1275, 1565
SseBI	AGGCCT	2 cut(s)	33, 644
SsiI	CCGC	3 cut(s)	205, 339, 1020
SspMI	CTAG	3 cut(s)	588, 1164, 1269
SstI	GAGCTC	1 cut(s)	388
StuI	AGGCCT	2 cut(s)	33, 644
StyD4I	CCNGG	6 cut(s)	466, 1185, 1186, 1327, 1346, 1539
StyI	CCWWGG	3 cut(s)	278, 459, 1464
TaaI	ACNGT	4 cut(s)	736, 769, 805, 1039
TaqI	TCGA	5 cut(s)	660, 666, 705, 1569, 1578
TasI	AATT	5 cut(s)	662, 785, 833, 1275, 1565
TatI	WGTACW	2 cut(s)	395, 1308
TauI	GCSGC	2 cut(s)	207, 1022
TfiI	GAWTC	6 cut(s)	300, 375, 653, 843, 975, 1052
TscAI	CASTG	2 cut(s)	270, 808
TseFI	GTSAC	1 cut(s)	534
TseI	GCWGC	6 cut(s)	73, 121, 170, 1112, 1202, 1406
Tsp45I	GTSAC	1 cut(s)	534
TspDTI	ATGAA	5 cut(s)	203, 648, 653, 666, 1519
TspGWI	ACGGA	1 cut(s)	646
TspMI	CCCGGG	1 cut(s)	1186
TspRI	CASTG	2 cut(s)	270, 808
VpaK11BI	GGWCC	1 cut(s)	739
XagI	CCTNNNNNAGG	1 cut(s)	1463
XapI	RAATTY	1 cut(s)	662
XceI	RCATGY	3 cut(s)	922, 1083, 1134
XcmI	CCANNNNNNNNNTGG	1 cut(s)	139
XmaI	CCCGGG	1 cut(s)	1186
XmiI	GTMKAC	1 cut(s)	502
XmnI	GAANNNNTTC	2 cut(s)	328, 1598
XspI	CTAG	3 cut(s)	588, 1164, 1269

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.