Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr5A

Orthogroup ID

OG0000711

Physical Location & Seq

Genomic Coordinates Forward (+)

538857 .. 541061

Gene Structure 2205 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh5AG007900.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1746 bp

ATGGTGGAAGGAGGAGCACACCCCTCTAGTAAGACAGAATTCACAGAATGCTGGAAGACGACATGGCGGACGCCTTACATTATGCGCCTCGCGCTCTCTGCCGGCATTGGAGGCCTTCTTTTTGGATATGACACAGGTGTCATTTCTGGGGCGCTGCTATACATTCGTGAGGACTTTGACGAAGTTGACAAGAAAACATGGCTGCAAGAAACCATTGTGAGTATGGCAGTTGCAGGCGCTATCATTGGTGCTGCAATTGGAGGATGGATGAACGATGCCCTCGGCCGCAAGAAATCAATACTAATAGCAGATGTGGTGTTCTTTGTGGGTGCAATAGTTATGGCAGTGGCTCCAACTCCTTGGGTGATCATCATTGGAAGAATCATAGTTGGTTTGGGAGTTGGAATGGCTTCCATGACCGCACCCCTTTACATTTCAGAAGCCTCTCCTCATAGAATCAGAGGAGCTCTTGTTAGTACAAATGGTCTTCTCATCACAGGAGGTCAGTTTTTGTCATACCTCATCAATCTGGCATTCACCAAGGCTCCTGGAACATGGCGTTGGATGCTTGGAGTTGCCGGTCTACCAGCTGTCGTTCAGTTTGTTTTGATGTTGTCTCTCCCTGAGTCTCCAAGATGGCTCTACCGAGATAACAAGGTTGACGAAGCTAGGGCCATCTTAGCTAAAATCTATCCTCCAGAAGAGGTTGATGATGAAATGAAGGCCTTGCATGAATCCGTCGAATTCGAAAAGTCTGAGGAAGGAGCTATTGGGAAAACCATGATCGAAAAACTAAAGAGTTGTTTCAGCAACACCGTGGTCCGAAGAGGACTCTATGCAGGGATCACAGTCCAAGTCGCTCAGCAATTTGTGGGTATCAACACTGTCATGTATTACAGCCCAACCATAGTTCAATTTGCTGGATTCGCATCCAACCAAACGGCTATGGCACTTTCTCTCATCACTTCTGGCCTCAATGTGGTTGGCACACTCATCAGCATGTGCTTTGTGGATAGATATGGAAGGAGAAGGCTCATGATCATTTCCATGTTAGGAATCATCAGTTGCCTTATCGTGTTAGCTGGAGTGTTCTTCTATGCCGCATCTCATTCTCCAACTGTTAGCCACTTGGAATCCAATCACTTTGGCACCAACACTACATGTCCAGCTTATGTTTCTGCTACTAATCCTGCAGCGTGGAACTGCATGACATGCTTGAAATCAACAGAATGCGCCTTCTGTGCTAGTAAAGTTGAAAATCTTGCCCCGGGAGCTTGTTTGGCTGCAAATGATAACATAAGGAGTCAATGTCGTGGAGAACATAGGGTATGGTACTCTAAAGGGTGTCCTAGCAAAATTGGTATCTTTGCAGTCATTTTGTTGGGATTGTACATCATTGTGTATGCACCTGGAATGGGAACTATTCCTTGGATTGTGAACTCAGAGATTTACCCATTGAGATACAGAGGCACTGGTGGAGGGATTGCTGCAGTTTCCAACTGGACTGCAAATCTCATAGTGAGTGAGACATACTTGACCCTCACCAAGGAACTGGGTTCGGCTGGAACTTTCCTCCTATTTGCTGGGTTTTCTACCATCGGGCTTATATTCATTTACTTCCTGGTTCCTGAAACCAAAGGAATGCAATTCGAAGAGGTCGAGAAGTTGCTTCAGAAGGGTTTCCGACCCAAGTTATTTGCTCCAAAGGACACCAAAGGTAAGCAGAAGGTTGAGGGGTCTGCTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005215 GO:0005351 GO:0005355 GO:0005402 GO:0005575 GO:0005623 GO:0005886 GO:0006810 GO:0006811 GO:0006812 GO:0008150 GO:0008324 GO:0008643 GO:0008645 GO:0015075 GO:0015077 GO:0015078 GO:0015144 GO:0015145 GO:0015149 GO:0015291 GO:0015293 GO:0015294 GO:0015295 GO:0015318 GO:0015672 GO:0015749 GO:0016020 GO:0022804 GO:0022857 GO:0022890 GO:0034219 GO:0034220 GO:0044464 GO:0046323 GO:0051119 GO:0051179 GO:0051234 GO:0055085 GO:0071702 GO:0071944 GO:0098655 GO:0098660 GO:0098662 GO:1902600 GO:1904659

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Sugar_tr

Protein Analysis

581

Amino Acids

63.06

Weight (kDa)

8.68

Isoelectric Point (pI)

33.33

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Sugar_tr	PF00083	31 - 370	8.8e-94	Sugar (and other) transporter
MFS_1	PF07690	36 - 367	5.2e-32	Major Facilitator Superfamily
Sugar_tr	PF00083	451 - 556	1.5e-27	Sugar (and other) transporter

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000711)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G35740 AT4G16480 AT4G16480 AT4G16480
fragaria_vesca	FvH4_3g00750 FvH4_3g00750 FvH4_3g00750 FvH4_3g00750 FvH4_3g00750 FvH4_3g00750 FvH4_3g00750 FvH4_3g00750 FvH4_3g00750 FvH4_3g00750 FvH4_3g00760
malus_domestica	MD05G1108700.v1.1 MD05G1359700.v1.1 MD05G1359900.v1.1 MD10G1335300.v1.1 MD10G1335500.v1.1
prunus_persica	Prupe.4G008300_v2.0.a1 Prupe.4G008300_v2.0.a1 Prupe.4G008400_v2.0.a1
pyrus_communis	pycom05g32480 pycom05g32490 pycom10g28510
rosa_chinensis	RchiOBHm_Chr1g0370501 RchiOBHm_Chr4g0424641 RchiOBHm_Chr5g0000981 RchiOBHm_Chr5g0001001 RchiOBHm_Chr7g0190531
rosa_laevigata	RLG00000004519 RLG00000030911 RLG00000030912
rosa_multiflora	Rmu_co8357507.1_g000001 Rmu_co8503263.1_g000001 Rmu_sc0000255.1_g000023 Rmu_sc0000255.1_g000024 Rmu_sc0002558.1_g000005 Rmu_sc0007329.1_g000007
rosa_roxburghii	Rroxscaffold_1G00075280 Rroxscaffold_1G00075290 Rroxscaffold_3G00264530
rosa_rugosa	Rorug04G0198700 Rorug04G0388100 Rorug04G0388200 Rorug04G0388300 Rorug04G0388400 Rorug04G0388500 Rorug04G0388600 Rorug04G0388700 Rorug04G0388800
rosa_samantha	Rh1AG366200 Rh1BG329000 Rh1CG342600 Rh1DG359300 Rh1DG360000 Rh4AG255600 Rh4BG261000 Rh4CG272100 Rh4DG255600 Rh5AG007800 Rh5AG007900 Rh5BG010000 Rh5BG010100 Rh5CG008500 Rh5CG008600 Rh5DG008500 Rh5DG008600
rosa_wichuraiana	Rw1G032250 Rw5G000810 Rw5G000820 Rw7G009720

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	137
AccB1I	GGYRCC	1 cut(s)	1148
AccI	GTMKAC	1 cut(s)	583
AccII	CGCG	1 cut(s)	92
AciI	CCGC	4 cut(s)	67, 286, 420, 1101
AclWI	GGATC	1 cut(s)	851
AcoI	YGGCCR	1 cut(s)	283
AcsI	RAATTY	2 cut(s)	38, 743
AcuI	CTGAAG	1 cut(s)	1655
AcyI	GRCGYC	1 cut(s)	71
AfaI	GTAC	3 cut(s)	478, 1334, 1391
AfiI	CCNNNNNNNGG	3 cut(s)	979, 1415, 1546
AflIII	ACRYGT	1 cut(s)	1160
AgsI	TTSAA	3 cut(s)	914, 1219, 1256
AjnI	CCWGG	3 cut(s)	547, 1408, 1620
AjuI	GAANNNNNNNTTGG	6 cut(s)	544, 576, 753, 785, 1411, 1443
AluBI	AGCT	8 cut(s)	467, 590, 668, 683, 767, 1082, 1169, 1274
AluI	AGCT	8 cut(s)	467, 590, 668, 683, 767, 1082, 1169, 1274
Alw21I	GWGCWC	2 cut(s)	19, 469
Alw26I	GTCTC	3 cut(s)	621, 633, 1520
AlwI	GGATC	1 cut(s)	851
Ama87I	CYCGRG	1 cut(s)	1267
AoxI	GGCC	5 cut(s)	112, 283, 672, 723, 970
ApeKI	GCWGC	6 cut(s)	154, 202, 251, 1193, 1283, 1487
ApoI	RAATTY	2 cut(s)	38, 743
Asp700I	GAANNNNTTC	2 cut(s)	409, 1679
AspLEI	GCGC	5 cut(s)	87, 94, 154, 239, 1235
AspS9I	GGNCC	2 cut(s)	672, 820
AsuC2I	CCSGG	2 cut(s)	1268, 1269
AsuHPI	GGTGA	3 cut(s)	376, 529, 1534
AsuII	TTCGAA	2 cut(s)	747, 1650
AvaI	CYCGRG	1 cut(s)	1267
AvaII	GGWCC	1 cut(s)	820
BanI	GGYRCC	1 cut(s)	1148
BanII	GRGCYC	1 cut(s)	469
BbsI	GAAGAC	2 cut(s)	62, 479
Bbv12I	GWGCWC	2 cut(s)	19, 469
BbvI	GCAGC	6 cut(s)	141, 189, 238, 1205, 1270, 1474
BccI	CCATC	4 cut(s)	258, 630, 683, 1604
BceAI	ACGGC	1 cut(s)	957
BciT130I	CCWGG	3 cut(s)	549, 1410, 1622
BclI	TGATCA	2 cut(s)	366, 1038
BcnI	CCSGG	2 cut(s)	1268, 1269
BcoDI	GTCTC	3 cut(s)	621, 633, 1520
BfaI	CTAG	4 cut(s)	27, 669, 1245, 1350
BfmI	CTRYAG	2 cut(s)	1191, 1488
BfoI	RGCGCY	2 cut(s)	155, 240
BisI	GCNGC	8 cut(s)	155, 203, 252, 286, 1101, 1194, 1284, 1488
BlpI	GCTNAGC	1 cut(s)	861
BlsI	GCNGC	8 cut(s)	156, 204, 253, 287, 1102, 1195, 1285, 1489
Bme1390I	CCNGG	5 cut(s)	549, 1268, 1269, 1410, 1622
Bme18I	GGWCC	1 cut(s)	820
BmeT110I	CYCGRG	1 cut(s)	1267
BmgT120I	GGNCC	2 cut(s)	672, 820
BmiI	GGNNCC	4 cut(s)	351, 546, 1150, 1626
BmrFI	CCNGG	5 cut(s)	549, 1268, 1269, 1410, 1622
BmrI	ACTGGG	1 cut(s)	1562
BmsI	GCATC	4 cut(s)	265, 555, 938, 1112
BmuI	ACTGGG	1 cut(s)	1562
BpiI	GAAGAC	2 cut(s)	62, 479
BpmI	CTGGAG	2 cut(s)	681, 1104
Bpu1102I	GCTNAGC	1 cut(s)	861
Bpu14I	TTCGAA	2 cut(s)	747, 1650
BpuMI	CCSGG	2 cut(s)	1268, 1269
BsaBI	GATNNNNATC	1 cut(s)	928
BsaHI	GRCGYC	1 cut(s)	71
BsaJI	CCNNGG	8 cut(s)	280, 359, 540, 816, 1266, 1267, 1427, 1545
BsaXI	ACNNNNNCTCC	6 cut(s)	456, 486, 529, 559, 1294, 1324
Bsc4I	CCNNNNNNNGG	3 cut(s)	979, 1415, 1546
Bse118I	RCCGGY	2 cut(s)	101, 578
Bse1I	ACTGG	3 cut(s)	1477, 1505, 1557
Bse8I	GATNNNNATC	1 cut(s)	928
BseBI	CCWGG	3 cut(s)	549, 1410, 1622
BseDI	CCNNGG	8 cut(s)	280, 359, 540, 816, 1266, 1267, 1427, 1545
BseGI	GGATG	4 cut(s)	269, 273, 570, 929
BseJI	GATNNNNATC	1 cut(s)	928
BseLI	CCNNNNNNNGG	3 cut(s)	979, 1415, 1546
BseMII	CTCAG	4 cut(s)	615, 747, 875, 1455
BseNI	ACTGG	3 cut(s)	1477, 1505, 1557
BseRI	GAGGAG	3 cut(s)	27, 438, 477
BseX3I	CGGCCG	1 cut(s)	283
BseXI	GCAGC	6 cut(s)	141, 189, 238, 1205, 1270, 1474
BseYI	CCCAGC	1 cut(s)	1583
Bsh1236I	CGCG	1 cut(s)	92
Bsh1285I	CGRYCG	1 cut(s)	286
BshFI	GGCC	5 cut(s)	114, 285, 674, 725, 972
BshNI	GGYRCC	1 cut(s)	1148
BsiEI	CGRYCG	1 cut(s)	286
BsiHKAI	GWGCWC	2 cut(s)	19, 469
BsiHKCI	CYCGRG	1 cut(s)	1267
BsiSI	CCGG	3 cut(s)	102, 579, 1268
BslI	CCNNNNNNNGG	3 cut(s)	979, 1415, 1546
BsmAI	GTCTC	3 cut(s)	621, 633, 1520
BsmI	GAATGC	4 cut(s)	53, 533, 1235, 1647
BsnI	GGCC	5 cut(s)	114, 285, 674, 725, 972
BsoBI	CYCGRG	1 cut(s)	1267
Bsp119I	TTCGAA	2 cut(s)	747, 1650
Bsp1286I	GDGCHC	2 cut(s)	19, 469
Bsp1407I	TGTACA	1 cut(s)	1389
Bsp143I	GATC	4 cut(s)	366, 783, 843, 1038
Bsp1720I	GCTNAGC	1 cut(s)	861
BspACI	CCGC	4 cut(s)	67, 286, 420, 1101
BspANI	GGCC	5 cut(s)	114, 285, 674, 725, 972
BspCNI	CTCAG	4 cut(s)	616, 748, 874, 1454
BspFNI	CGCG	1 cut(s)	92
BspHI	TCATGA	1 cut(s)	1035
BspLI	GGNNCC	4 cut(s)	351, 546, 1150, 1626
BspMAI	CTGCAG	2 cut(s)	1195, 1492
BspPI	GGATC	1 cut(s)	851
BspT104I	TTCGAA	2 cut(s)	747, 1650
BspT107I	GGYRCC	1 cut(s)	1148
BsrFI	RCCGGY	2 cut(s)	101, 578
BsrGI	TGTACA	1 cut(s)	1389
BsrI	ACTGG	3 cut(s)	1477, 1505, 1557
BssAI	RCCGGY	2 cut(s)	101, 578
BssECI	CCNNGG	8 cut(s)	280, 359, 540, 816, 1266, 1267, 1427, 1545
BssMI	GATC	4 cut(s)	366, 783, 843, 1038
BssNI	GRCGYC	1 cut(s)	71
BssT1I	CCWWGG	4 cut(s)	359, 540, 1427, 1545
Bst2UI	CCWGG	3 cut(s)	549, 1410, 1622
Bst4CI	ACNGT	4 cut(s)	817, 850, 886, 1120
Bst6I	CTCTTC	3 cut(s)	696, 820, 1647
BstACI	GRCGYC	1 cut(s)	71
BstAPI	GCANNNNNTGC	1 cut(s)	1212
BstAUI	TGTACA	1 cut(s)	1389
BstBI	TTCGAA	2 cut(s)	747, 1650
BstC8I	GCNNGC	2 cut(s)	103, 235
BstDEI	CTNAG	5 cut(s)	624, 679, 756, 861, 1441
BstDSI	CCRYGG	1 cut(s)	816
BstENI	CCTNNNNNAGG	1 cut(s)	1544
BstF5I	GGATG	4 cut(s)	269, 273, 570, 929
BstFNI	CGCG	1 cut(s)	92
BstH2I	RGCGCY	2 cut(s)	155, 240
BstHHI	GCGC	5 cut(s)	87, 94, 154, 239, 1235
BstKTI	GATC	4 cut(s)	369, 786, 846, 1041
BstMAI	GTCTC	3 cut(s)	621, 633, 1520
BstMBI	GATC	4 cut(s)	366, 783, 843, 1038
BstMCI	CGRYCG	1 cut(s)	286
BstNI	CCWGG	3 cut(s)	549, 1410, 1622
BstNSI	RCATGY	3 cut(s)	1003, 1164, 1215
BstSCI	CCNGG	5 cut(s)	547, 1266, 1267, 1408, 1620
BstSFI	CTRYAG	2 cut(s)	1191, 1488
BstUI	CGCG	1 cut(s)	92
BstV1I	GCAGC	6 cut(s)	141, 189, 238, 1205, 1270, 1474
BstV2I	GAAGAC	2 cut(s)	62, 479
BstXI	CCANNNNNNTGG	2 cut(s)	360, 1552
BstZI	CGGCCG	1 cut(s)	283
BsuRI	GGCC	5 cut(s)	114, 285, 674, 725, 972
BtgI	CCRYGG	1 cut(s)	816
BtsCI	GGATG	4 cut(s)	269, 273, 570, 929
BtsI	GCAGTG	1 cut(s)	351
BtsIMutI	CAGTG	3 cut(s)	351, 882, 1470
Cac8I	GCNNGC	2 cut(s)	103, 235
CciI	TCATGA	1 cut(s)	1035
CfoI	GCGC	5 cut(s)	87, 94, 154, 239, 1235
Cfr10I	RCCGGY	2 cut(s)	101, 578
Cfr13I	GGNCC	2 cut(s)	672, 820
Cfr9I	CCCGGG	1 cut(s)	1267
CseI	GACGC	1 cut(s)	79
Csp6I	GTAC	3 cut(s)	477, 1333, 1390
CviQI	GTAC	3 cut(s)	477, 1333, 1390
DdeI	CTNAG	5 cut(s)	624, 679, 756, 861, 1441
DpnI	GATC	4 cut(s)	368, 785, 845, 1040
DpnII	GATC	4 cut(s)	366, 783, 843, 1038
DrdI	GACNNNNNNGTC	1 cut(s)	137
DseDI	GACNNNNNNGTC	1 cut(s)	137
EaeI	YGGCCR	1 cut(s)	283
EagI	CGGCCG	1 cut(s)	283
Eam1104I	CTCTTC	3 cut(s)	696, 820, 1647
EarI	CTCTTC	3 cut(s)	696, 820, 1647
EciI	GGCGGA	1 cut(s)	82
Ecl136II	GAGCTC	1 cut(s)	467
EclXI	CGGCCG	1 cut(s)	283
Eco130I	CCWWGG	4 cut(s)	359, 540, 1427, 1545
Eco147I	AGGCCT	2 cut(s)	114, 725
Eco24I	GRGCYC	1 cut(s)	469
Eco47I	GGWCC	1 cut(s)	820
Eco52I	CGGCCG	1 cut(s)	283
Eco53kI	GAGCTC	1 cut(s)	467
Eco57I	CTGAAG	1 cut(s)	1655
Eco88I	CYCGRG	1 cut(s)	1267
EcoICRI	GAGCTC	1 cut(s)	467
EcoNI	CCTNNNNNAGG	1 cut(s)	1544
EcoRI	GAATTC	2 cut(s)	38, 743
EcoRII	CCWGG	3 cut(s)	547, 1408, 1620
EcoT14I	CCWWGG	4 cut(s)	359, 540, 1427, 1545
EcoT38I	GRGCYC	1 cut(s)	469
ErhI	CCWWGG	4 cut(s)	359, 540, 1427, 1545
FbaI	TGATCA	2 cut(s)	366, 1038
FblI	GTMKAC	1 cut(s)	583
Fnu4HI	GCNGC	8 cut(s)	155, 203, 252, 286, 1101, 1194, 1284, 1488
FokI	GGATG	4 cut(s)	276, 280, 577, 916
FriOI	GRGCYC	1 cut(s)	469
Fsp4HI	GCNGC	8 cut(s)	155, 203, 252, 286, 1101, 1194, 1284, 1488
FspBI	CTAG	4 cut(s)	27, 669, 1245, 1350
GlaI	GCGC	5 cut(s)	86, 93, 153, 238, 1234
GluI	GCNGC	8 cut(s)	155, 203, 252, 286, 1101, 1194, 1284, 1488
GsaI	CCCAGC	1 cut(s)	1587
GsuI	CTGGAG	2 cut(s)	681, 1104
HaeII	RGCGCY	2 cut(s)	155, 240
HaeIII	GGCC	5 cut(s)	114, 285, 674, 725, 972
HapII	CCGG	3 cut(s)	102, 579, 1268
HgaI	GACGC	1 cut(s)	79
HhaI	GCGC	5 cut(s)	87, 94, 154, 239, 1235
Hin1I	GRCGYC	1 cut(s)	71
Hin6I	GCGC	5 cut(s)	85, 92, 152, 237, 1233
HinP1I	GCGC	5 cut(s)	85, 92, 152, 237, 1233
HincII	GTYRAC	2 cut(s)	187, 661
HindII	GTYRAC	2 cut(s)	187, 661
HinfI	GANTC	9 cut(s)	381, 456, 626, 734, 831, 924, 1056, 1133, 1303
HpaII	CCGG	3 cut(s)	102, 579, 1268
HphI	GGTGA	3 cut(s)	376, 529, 1534
Hpy166II	GTNNAC	4 cut(s)	187, 584, 661, 1438
Hpy188I	TCNGA	7 cut(s)	439, 461, 757, 824, 1444, 1674, 1685
Hpy188III	TCNNGA	5 cut(s)	167, 698, 1036, 1628, 1660
Hpy8I	GTNNAC	4 cut(s)	187, 584, 661, 1438
Hpy99I	CGWCG	1 cut(s)	743
HpyAV	CCTTC	8 cut(s)	125, 715, 755, 1017, 1023, 1246, 1669, 1720
HpyCH4III	ACNGT	4 cut(s)	817, 850, 886, 1120
HpyF3I	CTNAG	5 cut(s)	624, 679, 756, 861, 1441
Hsp92I	GRCGYC	1 cut(s)	71
HspAI	GCGC	5 cut(s)	85, 92, 152, 237, 1233
KroI	GCCGGC	1 cut(s)	101
KroNI	GCCGGC	1 cut(s)	103
Ksp22I	TGATCA	2 cut(s)	366, 1038
Kzo9I	GATC	4 cut(s)	366, 783, 843, 1038
LmnI	GCTCC	7 cut(s)	14, 355, 464, 550, 764, 1271, 1705
Lsp1109I	GCAGC	6 cut(s)	141, 189, 238, 1205, 1270, 1474
LweI	GCATC	4 cut(s)	265, 555, 938, 1112
MaeI	CTAG	4 cut(s)	27, 669, 1245, 1350
MalI	GATC	4 cut(s)	368, 785, 845, 1040
MboI	GATC	4 cut(s)	366, 783, 843, 1038
MboII	GAAGA	7 cut(s)	67, 390, 479, 713, 837, 1084, 1664
MfeI	CAATTG	1 cut(s)	255
MhlI	GDGCHC	2 cut(s)	19, 469
MluCI	AATT	7 cut(s)	38, 255, 743, 866, 914, 1356, 1646
MlyI	GAGTC	3 cut(s)	635, 825, 1312
MmeI	TCCRAC	7 cut(s)	377, 382, 542, 957, 1139, 1521, 1708
MroNI	GCCGGC	1 cut(s)	101
MroXI	GAANNNNTTC	2 cut(s)	409, 1679
MslI	CAYNNNNRTG	4 cut(s)	887, 998, 1046, 1397
MspA1I	CMGCKG	1 cut(s)	590
MspI	CCGG	3 cut(s)	102, 579, 1268
MspR9I	CCNGG	5 cut(s)	549, 1268, 1269, 1410, 1622
MunI	CAATTG	1 cut(s)	255
Mva1269I	GAATGC	4 cut(s)	53, 533, 1235, 1647
MvaI	CCWGG	3 cut(s)	549, 1410, 1622
MvnI	CGCG	1 cut(s)	92
NaeI	GCCGGC	1 cut(s)	103
NciI	CCSGG	2 cut(s)	1268, 1269
NdeII	GATC	4 cut(s)	366, 783, 843, 1038
NgoMIV	GCCGGC	1 cut(s)	101
NlaIV	GGNNCC	4 cut(s)	351, 546, 1150, 1626
NmeAIII	GCCGAG	1 cut(s)	261
NspI	RCATGY	3 cut(s)	1003, 1164, 1215
NspV	TTCGAA	2 cut(s)	747, 1650
PagI	TCATGA	1 cut(s)	1035
PceI	AGGCCT	2 cut(s)	114, 725
PciI	ACATGT	1 cut(s)	1160
PcsI	WCGNNNNNNNCGW	1 cut(s)	1656
PctI	GAATGC	4 cut(s)	53, 533, 1235, 1647
PdiI	GCCGGC	1 cut(s)	103
PdmI	GAANNNNTTC	2 cut(s)	409, 1679
PfeI	GAWTC	6 cut(s)	381, 456, 734, 924, 1056, 1133
PfoI	TCCNGGA	1 cut(s)	547
PkrI	GCNGC	8 cut(s)	156, 204, 253, 287, 1102, 1195, 1285, 1489
PleI	GAGTC	3 cut(s)	634, 825, 1311
PpsI	GAGTC	3 cut(s)	634, 825, 1311
PscI	ACATGT	1 cut(s)	1160
Psp124BI	GAGCTC	1 cut(s)	469
Psp6I	CCWGG	3 cut(s)	547, 1408, 1620
PspFI	CCCAGC	1 cut(s)	1583
PspGI	CCWGG	3 cut(s)	547, 1408, 1620
PspN4I	GGNNCC	4 cut(s)	351, 546, 1150, 1626
PspPI	GGNCC	2 cut(s)	672, 820
PstI	CTGCAG	2 cut(s)	1195, 1492
PvuII	CAGCTG	1 cut(s)	590
RsaI	GTAC	3 cut(s)	478, 1334, 1391
RsaNI	GTAC	3 cut(s)	477, 1333, 1390
RseI	CAYNNNNRTG	4 cut(s)	887, 998, 1046, 1397
SacI	GAGCTC	1 cut(s)	469
SatI	GCNGC	8 cut(s)	155, 203, 252, 286, 1101, 1194, 1284, 1488
Sau3AI	GATC	4 cut(s)	366, 783, 843, 1038
Sau96I	GGNCC	2 cut(s)	672, 820
SchI	GAGTC	3 cut(s)	635, 825, 1312
ScrFI	CCNGG	5 cut(s)	549, 1268, 1269, 1410, 1622
SduI	GDGCHC	2 cut(s)	19, 469
SfaNI	GCATC	4 cut(s)	265, 555, 938, 1112
SfcI	CTRYAG	2 cut(s)	1191, 1488
SfuI	TTCGAA	2 cut(s)	747, 1650
SinI	GGWCC	1 cut(s)	820
SmaI	CCCGGG	1 cut(s)	1269
SmiMI	CAYNNNNRTG	4 cut(s)	887, 998, 1046, 1397
Sse9I	AATT	7 cut(s)	38, 255, 743, 866, 914, 1356, 1646
SseBI	AGGCCT	2 cut(s)	114, 725
SsiI	CCGC	4 cut(s)	67, 286, 420, 1101
SspMI	CTAG	4 cut(s)	27, 669, 1245, 1350
SstI	GAGCTC	1 cut(s)	469
StuI	AGGCCT	2 cut(s)	114, 725
StyD4I	CCNGG	5 cut(s)	547, 1266, 1267, 1408, 1620
StyI	CCWWGG	4 cut(s)	359, 540, 1427, 1545
TaaI	ACNGT	4 cut(s)	817, 850, 886, 1120
TaqI	TCGA	5 cut(s)	741, 747, 786, 1650, 1659
TasI	AATT	7 cut(s)	38, 255, 743, 866, 914, 1356, 1646
TatI	WGTACW	2 cut(s)	476, 1389
TauI	GCSGC	2 cut(s)	288, 1103
TfiI	GAWTC	6 cut(s)	381, 456, 734, 924, 1056, 1133
TscAI	CASTG	3 cut(s)	351, 889, 1477
TseI	GCWGC	6 cut(s)	154, 202, 251, 1193, 1283, 1487
TspDTI	ATGAA	5 cut(s)	284, 729, 734, 747, 1600
TspGWI	ACGGA	1 cut(s)	727
TspMI	CCCGGG	1 cut(s)	1267
TspRI	CASTG	3 cut(s)	351, 889, 1477
VpaK11BI	GGWCC	1 cut(s)	820
XagI	CCTNNNNNAGG	1 cut(s)	1544
XapI	RAATTY	2 cut(s)	38, 743
XceI	RCATGY	3 cut(s)	1003, 1164, 1215
XcmI	CCANNNNNNNNNTGG	1 cut(s)	220
XmaI	CCCGGG	1 cut(s)	1267
XmiI	GTMKAC	1 cut(s)	583
XmnI	GAANNNNTTC	2 cut(s)	409, 1679
XspI	CTAG	4 cut(s)	27, 669, 1245, 1350

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.