Rh5AG007800
ERF Family

Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr5A
Physical Location & Seq
Forward (+)
534072 .. 537733
3662 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh5AG007800.1

Sequence Viewer

Length: 1299 bp
ATGGAAGCAGGACACCCGGCTGCTAGTAAGACAGAGTTCACAGAGTGTTGGAGAACAACATGGAAGACCCCTTACATTTTGCGTCTCGCCCTCTCAGCTGGTATTGGAGGCCTCCTTTTCGGATACGATACAGGTGTGATTTCTGGGGCATTGCTGTACATTCGTGAGGACTTTCGTGAGGTTGACAAGAAAACATGGCTGCAGGAGACCATTGTGAGTATGGCAGTTGCCGGCGCCATATTTGGTGCTGCAATTGGAGGATGGATGAACGATGCTATTGGCCGGAGAAAGTCAATCTTGTGTGCAGATTTTGTGTTCTTCCTTGGTGCAATAGTCATGGCTGTTGCACCAGCTCCGTGGGTGATCATAATTGGAAGAATTCTGGTTGGTTTGGGAGTGGGTATGGCTTCTATGACCTCACCACTATACATCTCAGAAGCTTCTCCTGCTAGAATCCGGGGTGCTCTTGTTAGTACAAACGGTTTTCTAATTACTGGAGGTCAATTTTTGGCATACCTCATCAATCTTGCCTTCACCAAGGCTCCTGGAACCTGGCGTTGGATGCTTGGAGTGGCCGGAGTTCCTGCTGTGGTTCAGTTTGGATTGATGTGGTCACTCCCAGAGTCTCCAAGGTGGCTCTACAGAAAGAATAAGGTAGATGAAGCCAGGGCTATCTTAGAGAAAATTTACCCTGCGGATGAGGTTGAGAATGAAATGAAAGCATTGCATGAATCTGTTGAAATGGAAAAGGCTGAGGAAGGAGATGTTGGTGATGGCATCATAGCAAAACTAAAGGGTGCATTCAGCAACCCTGTGGTCCGAAGAGGACTCTATGCAGGCATAACTGTCCAAGTAGCTCAGCAATTTGTGGGTATCAACACTGTCATGTATTACAGCCCAACCATTGTTCAGTTTGCTGGATTTGCTTCCAACCAAACAGCTTTAGCACTTTCTCTCATCACTTCCGGTCTCAATGTTGTTGGCACTGTAATCAGTATGTGCTTTGTGGATAGATATGGAAGGAGAAGGCTTATGATCATTTCTATGGTTGGAATTATTATTTGTCTAGTGGTGTTATCTGTGGTGTTTTTCGAGGCAGCAGCTCAAGCTCCTCGTATTAGCAATTTGGAATCAACTCATTTTGGTAGTAACTCTACATGTCCGGCTTATGTGTCTGCCCCTAATCCAGCCTCATGGAACTGCATGACATGTTTGAAAGCTCAGTGCGGCTTCTGTGCTAATGGTGTCTCGGCTGTAAGTGCTACTTCACTTTTTTCTTTTGTGTATTTGCTTTCTTAA

Protein Analysis

432

Amino Acids

46.58

Weight (kDa)

8.51

Isoelectric Point (pI)

32.53

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Sugar_tr PF00083 30 - 364 2.8e-93 Sugar (and other) transporter
MFS_1 PF07690 35 - 363 8.1e-31 Major Facilitator Superfamily
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 233
AciI CCGC 2 cut(s) 695, 1227
AcoI YGGCCR 2 cut(s) 280, 573
AcsI RAATTY 2 cut(s) 378, 684
AcyI GRCGYC 1 cut(s) 234
AdeI CACNNNGTG 1 cut(s) 45
AfaI GTAC 2 cut(s) 158, 475
AfiI CCNNNNNNNGG 1 cut(s) 558
AflIII ACRYGT 2 cut(s) 1157, 1208
AgsI TTSAA 2 cut(s) 740, 1216
AjnI CCWGG 3 cut(s) 544, 551, 665
AjuI GAANNNNNNNTTGG 4 cut(s) 541, 573, 750, 782
AluBI AGCT 8 cut(s) 98, 353, 440, 857, 941, 1103, 1109, 1220
AluI AGCT 8 cut(s) 98, 353, 440, 857, 941, 1103, 1109, 1220
Alw21I GWGCWC 1 cut(s) 466
Alw26I GTCTC 5 cut(s) 89, 200, 630, 974, 1252
AoxI GGCC 3 cut(s) 109, 280, 573
ApeKI GCWGC 5 cut(s) 20, 199, 248, 1097, 1100
ApoI RAATTY 2 cut(s) 378, 684
AspLEI GCGC 1 cut(s) 236
AspS9I GGNCC 1 cut(s) 817
AsuC2I CCSGG 2 cut(s) 17, 458
AsuHPI GGTGA 4 cut(s) 373, 411, 526, 782
AvaII GGWCC 1 cut(s) 817
BaeI ACNNNNGTAYC 2 cut(s) 120, 153
BanI GGYRCC 1 cut(s) 233
BarI GAAGNNNNNNTAC 2 cut(s) 56, 88
BbsI GAAGAC 1 cut(s) 71
Bbv12I GWGCWC 1 cut(s) 466
BbvCI CCTCAGC 1 cut(s) 753
BbvI GCAGC 5 cut(s) 7, 186, 235, 1109, 1112
BccI CCATC 2 cut(s) 255, 767
BciT130I CCWGG 3 cut(s) 546, 553, 667
BciVI GTATCC 1 cut(s) 116
BclI TGATCA 2 cut(s) 363, 1035
BcnI CCSGG 2 cut(s) 17, 458
BcoDI GTCTC 5 cut(s) 89, 200, 630, 974, 1252
BfaI CTAG 3 cut(s) 24, 450, 1067
BfmI CTRYAG 2 cut(s) 200, 640
BfoI RGCGCY 1 cut(s) 237
BfuI GTATCC 1 cut(s) 116
BisI GCNGC 6 cut(s) 21, 200, 249, 1098, 1101, 1228
BlpI GCTNAGC 1 cut(s) 858
BlsI GCNGC 6 cut(s) 22, 201, 250, 1099, 1102, 1229
Bme1390I CCNGG 5 cut(s) 17, 458, 546, 553, 667
Bme18I GGWCC 1 cut(s) 817
BmgT120I GGNCC 1 cut(s) 817
BmiI GGNNCC 3 cut(s) 235, 543, 550
BmrFI CCNGG 5 cut(s) 17, 458, 546, 553, 667
BmsI GCATC 3 cut(s) 262, 552, 786
BpiI GAAGAC 1 cut(s) 71
BpmI CTGGAG 1 cut(s) 516
Bpu10I CCTNAGC 1 cut(s) 753
Bpu1102I GCTNAGC 1 cut(s) 858
BpuEI CTTGAG 1 cut(s) 1089
BpuMI CCSGG 2 cut(s) 17, 458
BsaHI GRCGYC 1 cut(s) 234
BsaI GGTCTC 2 cut(s) 200, 974
BsaJI CCNNGG 6 cut(s) 322, 356, 457, 537, 629, 666
BsaWI WCCGGW 1 cut(s) 965
BsaXI ACNNNNNCTCC 2 cut(s) 526, 556
Bsc4I CCNNNNNNNGG 1 cut(s) 558
Bse118I RCCGGY 1 cut(s) 230
Bse1I ACTGG 1 cut(s) 499
Bse3DI GCAATG 2 cut(s) 149, 722
BseBI CCWGG 3 cut(s) 546, 553, 667
BseDI CCNNGG 6 cut(s) 322, 356, 457, 537, 629, 666
BseGI GGATG 4 cut(s) 266, 270, 567, 703
BseLI CCNNNNNNNGG 1 cut(s) 558
BseMI GCAATG 2 cut(s) 149, 722
BseMII CTCAG 5 cut(s) 108, 447, 744, 872, 1235
BseNI ACTGG 1 cut(s) 499
BseRI GAGGAG 1 cut(s) 1101
BseXI GCAGC 5 cut(s) 7, 186, 235, 1109, 1112
BsgI GTGCAG 1 cut(s) 324
BshFI GGCC 3 cut(s) 111, 282, 575
BshNI GGYRCC 1 cut(s) 233
BsiHKAI GWGCWC 1 cut(s) 466
BsiSI CCGG 7 cut(s) 17, 231, 283, 457, 576, 966, 1163
BslI CCNNNNNNNGG 1 cut(s) 558
BsmAI GTCTC 5 cut(s) 89, 200, 630, 974, 1252
BsmBI CGTCTC 1 cut(s) 89
BsmI GAATGC 1 cut(s) 800
BsnI GGCC 3 cut(s) 111, 282, 575
Bso31I GGTCTC 2 cut(s) 200, 974
Bsp1286I GDGCHC 1 cut(s) 466
Bsp1407I TGTACA 1 cut(s) 156
Bsp143I GATC 2 cut(s) 363, 1035
Bsp1720I GCTNAGC 1 cut(s) 858
BspACI CCGC 2 cut(s) 695, 1227
BspANI GGCC 3 cut(s) 111, 282, 575
BspCNI CTCAG 5 cut(s) 107, 446, 745, 871, 1234
BspLI GGNNCC 3 cut(s) 235, 543, 550
BspMAI CTGCAG 1 cut(s) 204
BspT107I GGYRCC 1 cut(s) 233
BspTNI GGTCTC 2 cut(s) 200, 974
BsrDI GCAATG 2 cut(s) 149, 722
BsrFI RCCGGY 1 cut(s) 230
BsrGI TGTACA 1 cut(s) 156
BsrI ACTGG 1 cut(s) 499
BssAI RCCGGY 1 cut(s) 230
BssECI CCNNGG 6 cut(s) 322, 356, 457, 537, 629, 666
BssMI GATC 2 cut(s) 363, 1035
BssNI GRCGYC 1 cut(s) 234
BssT1I CCWWGG 3 cut(s) 322, 537, 629
Bst2UI CCWGG 3 cut(s) 546, 553, 667
Bst4CI ACNGT 4 cut(s) 482, 847, 883, 988
Bst6I CTCTTC 1 cut(s) 817
BstACI GRCGYC 1 cut(s) 234
BstAUI TGTACA 1 cut(s) 156
BstC8I GCNNGC 2 cut(s) 232, 838
BstDEI CTNAG 6 cut(s) 94, 433, 676, 753, 858, 1221
BstDSI CCRYGG 1 cut(s) 356
BstF5I GGATG 4 cut(s) 266, 270, 567, 703
BstH2I RGCGCY 1 cut(s) 237
BstHHI GCGC 1 cut(s) 236
BstKTI GATC 2 cut(s) 366, 1038
BstMAI GTCTC 5 cut(s) 89, 200, 630, 974, 1252
BstMBI GATC 2 cut(s) 363, 1035
BstMWI GCNNNNNNNGC 6 cut(s) 95, 446, 562, 923, 1106, 1259
BstNI CCWGG 3 cut(s) 546, 553, 667
BstNSI RCATGY 2 cut(s) 1161, 1212
BstSCI CCNGG 5 cut(s) 15, 456, 544, 551, 665
BstSFI CTRYAG 2 cut(s) 200, 640
BstV1I GCAGC 5 cut(s) 7, 186, 235, 1109, 1112
BstV2I GAAGAC 1 cut(s) 71
BstXI CCANNNNNNTGG 2 cut(s) 357, 1194
BsuI GTATCC 1 cut(s) 116
BsuRI GGCC 3 cut(s) 111, 282, 575
BtgI CCRYGG 1 cut(s) 356
BtsCI GGATG 4 cut(s) 266, 270, 567, 703
BtsIMutI CAGTG 3 cut(s) 879, 984, 1229
Cac8I GCNNGC 2 cut(s) 232, 838
CfoI GCGC 1 cut(s) 236
Cfr10I RCCGGY 1 cut(s) 230
Cfr13I GGNCC 1 cut(s) 817
CseI GACGC 1 cut(s) 71
Csp6I GTAC 2 cut(s) 157, 474
CviAII CATG 9 cut(s) 60, 195, 337, 728, 886, 1158, 1194, 1204, 1209
CviQI GTAC 2 cut(s) 157, 474
DdeI CTNAG 6 cut(s) 94, 433, 676, 753, 858, 1221
DinI GGCGCC 1 cut(s) 235
DpnI GATC 2 cut(s) 365, 1037
DpnII GATC 2 cut(s) 363, 1035
DraIII CACNNNGTG 1 cut(s) 45
EaeI YGGCCR 2 cut(s) 280, 573
Eam1104I CTCTTC 1 cut(s) 817
EarI CTCTTC 1 cut(s) 817
Eco130I CCWWGG 3 cut(s) 322, 537, 629
Eco147I AGGCCT 1 cut(s) 111
Eco31I GGTCTC 2 cut(s) 200, 974
Eco47I GGWCC 1 cut(s) 817
EcoRI GAATTC 1 cut(s) 378
EcoRII CCWGG 3 cut(s) 544, 551, 665
EcoT14I CCWWGG 3 cut(s) 322, 537, 629
EgeI GGCGCC 1 cut(s) 235
EheI GGCGCC 1 cut(s) 235
ErhI CCWWGG 3 cut(s) 322, 537, 629
Esp3I CGTCTC 1 cut(s) 89
FaeI CATG 9 cut(s) 63, 198, 340, 731, 889, 1161, 1197, 1207, 1212
FalI AAGNNNNNCTT 4 cut(s) 281, 313, 1249, 1281
FatI CATG 9 cut(s) 59, 194, 336, 727, 885, 1157, 1193, 1203, 1208
FbaI TGATCA 2 cut(s) 363, 1035
Fnu4HI GCNGC 6 cut(s) 21, 200, 249, 1098, 1101, 1228
FokI GGATG 4 cut(s) 273, 277, 574, 710
Fsp4HI GCNGC 6 cut(s) 21, 200, 249, 1098, 1101, 1228
FspBI CTAG 3 cut(s) 24, 450, 1067
GlaI GCGC 1 cut(s) 235
GluI GCNGC 6 cut(s) 21, 200, 249, 1098, 1101, 1228
GsuI CTGGAG 1 cut(s) 516
HaeII RGCGCY 1 cut(s) 237
HaeIII GGCC 3 cut(s) 111, 282, 575
HapII CCGG 7 cut(s) 17, 231, 283, 457, 576, 966, 1163
HgaI GACGC 1 cut(s) 71
HhaI GCGC 1 cut(s) 236
Hin1I GRCGYC 1 cut(s) 234
Hin1II CATG 9 cut(s) 63, 198, 340, 731, 889, 1161, 1197, 1207, 1212
Hin6I GCGC 1 cut(s) 234
HinP1I GCGC 1 cut(s) 234
HincII GTYRAC 1 cut(s) 184
HindII GTYRAC 1 cut(s) 184
HindIII AAGCTT 1 cut(s) 438
HinfI GANTC 5 cut(s) 453, 623, 731, 828, 1130
HpaII CCGG 7 cut(s) 17, 231, 283, 457, 576, 966, 1163
HphI GGTGA 4 cut(s) 373, 411, 526, 782
Hpy166II GTNNAC 2 cut(s) 39, 184
Hpy188I TCNGA 3 cut(s) 122, 436, 821
Hpy188III TCNNGA 2 cut(s) 164, 176
Hpy8I GTNNAC 2 cut(s) 39, 184
HpyAV CCTTC 4 cut(s) 541, 752, 1014, 1020
HpyCH4III ACNGT 4 cut(s) 482, 847, 883, 988
HpyCH4V TGCA 9 cut(s) 202, 251, 305, 329, 347, 727, 800, 836, 1203
HpyF10VI GCNNNNNNNGC 6 cut(s) 95, 446, 562, 923, 1106, 1259
HpyF3I CTNAG 6 cut(s) 94, 433, 676, 753, 858, 1221
Hsp92I GRCGYC 1 cut(s) 234
Hsp92II CATG 9 cut(s) 63, 198, 340, 731, 889, 1161, 1197, 1207, 1212
HspAI GCGC 1 cut(s) 234
KasI GGCGCC 1 cut(s) 233
KroI GCCGGC 1 cut(s) 230
KroNI GCCGGC 1 cut(s) 232
Ksp22I TGATCA 2 cut(s) 363, 1035
Kzo9I GATC 2 cut(s) 363, 1035
LmnI GCTCC 3 cut(s) 358, 547, 1114
Lsp1109I GCAGC 5 cut(s) 7, 186, 235, 1109, 1112
LweI GCATC 3 cut(s) 262, 552, 786
MaeI CTAG 3 cut(s) 24, 450, 1067
MaeIII GTNAC 2 cut(s) 612, 1148
MalI GATC 2 cut(s) 365, 1037
MboI GATC 2 cut(s) 363, 1035
MboII GAAGA 4 cut(s) 76, 310, 387, 834
MfeI CAATTG 1 cut(s) 252
MhlI GDGCHC 1 cut(s) 466
MluCI AATT 9 cut(s) 252, 369, 378, 489, 503, 684, 863, 1053, 1123
Mly113I GGCGCC 1 cut(s) 234
MlyI GAGTC 2 cut(s) 632, 822
MmeI TCCRAC 4 cut(s) 29, 539, 954, 1030
MroNI GCCGGC 1 cut(s) 230
MseI TTAA 1 cut(s) 1297
MslI CAYNNNNRTG 2 cut(s) 884, 1043
MspA1I CMGCKG 1 cut(s) 98
MspI CCGG 7 cut(s) 17, 231, 283, 457, 576, 966, 1163
MspR9I CCNGG 5 cut(s) 17, 458, 546, 553, 667
MunI CAATTG 1 cut(s) 252
Mva1269I GAATGC 1 cut(s) 800
MvaI CCWGG 3 cut(s) 546, 553, 667
MwoI GCNNNNNNNGC 6 cut(s) 95, 446, 562, 923, 1106, 1259
NaeI GCCGGC 1 cut(s) 232
NarI GGCGCC 1 cut(s) 234
NciI CCSGG 2 cut(s) 17, 458
NdeII GATC 2 cut(s) 363, 1035
NgoMIV GCCGGC 1 cut(s) 230
NlaIII CATG 9 cut(s) 63, 198, 340, 731, 889, 1161, 1197, 1207, 1212
NlaIV GGNNCC 3 cut(s) 235, 543, 550
NmeAIII GCCGAG 1 cut(s) 1229
NmuCI GTSAC 1 cut(s) 612
NspI RCATGY 2 cut(s) 1161, 1212
PceI AGGCCT 1 cut(s) 111
PciI ACATGT 2 cut(s) 1157, 1208
PctI GAATGC 1 cut(s) 800
PdiI GCCGGC 1 cut(s) 232
PfeI GAWTC 3 cut(s) 453, 731, 1130
PfoI TCCNGGA 1 cut(s) 544
PkrI GCNGC 6 cut(s) 22, 201, 250, 1099, 1102, 1229
PleI GAGTC 2 cut(s) 631, 822
PluTI GGCGCC 1 cut(s) 237
PpsI GAGTC 2 cut(s) 631, 822
PscI ACATGT 2 cut(s) 1157, 1208
Psp6I CCWGG 3 cut(s) 544, 551, 665
PspGI CCWGG 3 cut(s) 544, 551, 665
PspN4I GGNNCC 3 cut(s) 235, 543, 550
PspPI GGNCC 1 cut(s) 817
PstI CTGCAG 1 cut(s) 204
PvuII CAGCTG 1 cut(s) 98
RsaI GTAC 2 cut(s) 158, 475
RsaNI GTAC 2 cut(s) 157, 474
RseI CAYNNNNRTG 2 cut(s) 884, 1043
SaqAI TTAA 1 cut(s) 1297
SatI GCNGC 6 cut(s) 21, 200, 249, 1098, 1101, 1228
Sau3AI GATC 2 cut(s) 363, 1035
Sau96I GGNCC 1 cut(s) 817
SchI GAGTC 2 cut(s) 632, 822
ScrFI CCNGG 5 cut(s) 17, 458, 546, 553, 667
SduI GDGCHC 1 cut(s) 466
SfaNI GCATC 3 cut(s) 262, 552, 786
SfcI CTRYAG 2 cut(s) 200, 640
SfoI GGCGCC 1 cut(s) 235
SinI GGWCC 1 cut(s) 817
SmiMI CAYNNNNRTG 2 cut(s) 884, 1043
SmlI CTYRAG 1 cut(s) 1104
SmoI CTYRAG 1 cut(s) 1104
Sse9I AATT 9 cut(s) 252, 369, 378, 489, 503, 684, 863, 1053, 1123
SseBI AGGCCT 1 cut(s) 111
SsiI CCGC 2 cut(s) 695, 1227
SspDI GGCGCC 1 cut(s) 233
SspMI CTAG 3 cut(s) 24, 450, 1067
StuI AGGCCT 1 cut(s) 111
StyD4I CCNGG 5 cut(s) 15, 456, 544, 551, 665
StyI CCWWGG 3 cut(s) 322, 537, 629
TaaI ACNGT 4 cut(s) 482, 847, 883, 988
TaqI TCGA 1 cut(s) 1092
TasI AATT 9 cut(s) 252, 369, 378, 489, 503, 684, 863, 1053, 1123
TatI WGTACW 2 cut(s) 156, 473
TauI GCSGC 1 cut(s) 1230
TfiI GAWTC 3 cut(s) 453, 731, 1130
Tru1I TTAA 1 cut(s) 1297
Tru9I TTAA 1 cut(s) 1297
TscAI CASTG 3 cut(s) 886, 991, 1229
TseFI GTSAC 1 cut(s) 612
TseI GCWGC 5 cut(s) 20, 199, 248, 1097, 1100
Tsp45I GTSAC 1 cut(s) 612
TspDTI ATGAA 5 cut(s) 281, 675, 726, 731, 744
TspGWI ACGGA 1 cut(s) 345
TspRI CASTG 3 cut(s) 886, 991, 1229
VpaK11BI GGWCC 1 cut(s) 817
XapI RAATTY 2 cut(s) 378, 684
XceI RCATGY 2 cut(s) 1161, 1212
XcmI CCANNNNNNNNNTGG 1 cut(s) 217
XspI CTAG 3 cut(s) 24, 450, 1067
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.