WD40 repeats
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G19485 AT1G19485 |
| fragaria_vesca | FvH4_6g18260 FvH4_6g18260 FvH4_6g18260 FvH4_6g18260 FvH4_7g02500 |
| malus_domestica | MD09G1081300.v1.1 MD12G1022600.v1.1 |
| prunus_persica | Prupe.7G114200_v2.0.a1 Prupe.7G114200_v2.0.a1 |
| pyrus_communis | pycom09g00800 pycom12g02090 |
| rosa_chinensis | RchiOBHm_Chr3g0472691 RchiOBHm_Chr3g0472701 RchiOBHm_Chr4g0409331 |
| rosa_laevigata | RLG00000008568 RLG00000016132 RLG00000024063 |
| rosa_multiflora | Rmu_co8285783.1_g000001 Rmu_sc0001616.1_g000052 Rmu_sc0001616.1_g000057 Rmu_sc0001851.1_g000016 Rmu_sc0003510.1_g000010 Rmu_sc0003510.1_g000011 Rmu_sc0003510.1_g000012 Rmu_sc0034965.1_g000001 |
| rosa_roxburghii | Rroxscaffold_5G00353840 Rroxscaffold_6G00408710 |
| rosa_rugosa | Rorug03G0127200 Rorug04G0092400 Rorug04G0092500 |
| rosa_samantha | Rh3AG179900 Rh3BG205800 Rh3CG202900 Rh3DG169900 Rh4AG155600 Rh4BG153800 Rh4CG164600 Rh4DG148500 |
| rosa_wichuraiana | Rw3G016270 Rw4G012710 Rw4G012730 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 1 cut(s) | 290 |
| AcoI | YGGCCR | 1 cut(s) | 291 |
| AcuI | CTGAAG | 1 cut(s) | 222 |
| AcyI | GRCGYC | 1 cut(s) | 330 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 145 |
| AoxI | GGCC | 1 cut(s) | 291 |
| ApeKI | GCWGC | 1 cut(s) | 347 |
| BccI | CCATC | 2 cut(s) | 237, 264 |
| BfaI | CTAG | 1 cut(s) | 5 |
| BisI | GCNGC | 2 cut(s) | 291, 348 |
| BlsI | GCNGC | 2 cut(s) | 292, 349 |
| BmrI | ACTGGG | 2 cut(s) | 25, 78 |
| BmuI | ACTGGG | 2 cut(s) | 25, 78 |
| BsaHI | GRCGYC | 1 cut(s) | 330 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 145 |
| Bse1I | ACTGG | 2 cut(s) | 20, 73 |
| Bse3DI | GCAATG | 2 cut(s) | 27, 234 |
| BseGI | GGATG | 1 cut(s) | 163 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 145 |
| BseMI | GCAATG | 2 cut(s) | 27, 234 |
| BseNI | ACTGG | 2 cut(s) | 20, 73 |
| BshFI | GGCC | 1 cut(s) | 293 |
| BsiSI | CCGG | 1 cut(s) | 327 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 145 |
| BsnI | GGCC | 1 cut(s) | 293 |
| BspACI | CCGC | 1 cut(s) | 290 |
| BspANI | GGCC | 1 cut(s) | 293 |
| BspQI | GCTCTTC | 2 cut(s) | 33, 156 |
| BsrDI | GCAATG | 2 cut(s) | 27, 234 |
| BsrI | ACTGG | 2 cut(s) | 20, 73 |
| BssNI | GRCGYC | 1 cut(s) | 330 |
| Bst4CI | ACNGT | 1 cut(s) | 190 |
| Bst6I | CTCTTC | 2 cut(s) | 33, 156 |
| BstACI | GRCGYC | 1 cut(s) | 330 |
| BstDEI | CTNAG | 1 cut(s) | 31 |
| BstF5I | GGATG | 1 cut(s) | 163 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 347 |
| BsuRI | GGCC | 1 cut(s) | 293 |
| BtsCI | GGATG | 1 cut(s) | 163 |
| CseI | GACGC | 1 cut(s) | 319 |
| CviAII | CATG | 1 cut(s) | 154 |
| CviJI | RGCY | 7 cut(s) | 43, 77, 127, 166, 199, 274, 293 |
| CviKI_1 | RGCY | 7 cut(s) | 43, 77, 127, 166, 199, 274, 293 |
| DdeI | CTNAG | 1 cut(s) | 31 |
| EaeI | YGGCCR | 1 cut(s) | 291 |
| Eam1104I | CTCTTC | 2 cut(s) | 33, 156 |
| EarI | CTCTTC | 2 cut(s) | 33, 156 |
| Eco57I | CTGAAG | 1 cut(s) | 222 |
| EcoT22I | ATGCAT | 2 cut(s) | 155, 234 |
| FaeI | CATG | 1 cut(s) | 157 |
| FaiI | YATR | 5 cut(s) | 28, 151, 155, 234, 282 |
| FatI | CATG | 1 cut(s) | 153 |
| Fnu4HI | GCNGC | 2 cut(s) | 291, 348 |
| FokI | GGATG | 1 cut(s) | 170 |
| Fsp4HI | GCNGC | 2 cut(s) | 291, 348 |
| FspBI | CTAG | 1 cut(s) | 5 |
| GluI | GCNGC | 2 cut(s) | 291, 348 |
| HaeIII | GGCC | 1 cut(s) | 293 |
| HapII | CCGG | 1 cut(s) | 327 |
| HgaI | GACGC | 1 cut(s) | 319 |
| Hin1I | GRCGYC | 1 cut(s) | 330 |
| Hin1II | CATG | 1 cut(s) | 157 |
| HpaII | CCGG | 1 cut(s) | 327 |
| Hpy188I | TCNGA | 1 cut(s) | 109 |
| Hpy188III | TCNNGA | 3 cut(s) | 83, 176, 311 |
| Hpy99I | CGWCG | 1 cut(s) | 335 |
| HpyCH4III | ACNGT | 1 cut(s) | 190 |
| HpyCH4V | TGCA | 2 cut(s) | 153, 232 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 347 |
| HpyF3I | CTNAG | 1 cut(s) | 31 |
| Hsp92I | GRCGYC | 1 cut(s) | 330 |
| Hsp92II | CATG | 1 cut(s) | 157 |
| LguI | GCTCTTC | 2 cut(s) | 33, 156 |
| LpnPI | CCDG | 7 cut(s) | 41, 54, 141, 213, 225, 307, 340 |
| MaeI | CTAG | 1 cut(s) | 5 |
| MboII | GAAGA | 6 cut(s) | 50, 71, 74, 173, 191, 194 |
| MluCI | AATT | 1 cut(s) | 297 |
| MnlI | CCTC | 2 cut(s) | 103, 278 |
| Mph1103I | ATGCAT | 2 cut(s) | 155, 234 |
| MspI | CCGG | 1 cut(s) | 327 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 347 |
| NlaIII | CATG | 1 cut(s) | 157 |
| NsiI | ATGCAT | 2 cut(s) | 155, 234 |
| PciSI | GCTCTTC | 2 cut(s) | 33, 156 |
| PkrI | GCNGC | 2 cut(s) | 292, 349 |
| SapI | GCTCTTC | 2 cut(s) | 33, 156 |
| SatI | GCNGC | 2 cut(s) | 291, 348 |
| Sse9I | AATT | 1 cut(s) | 297 |
| SsiI | CCGC | 1 cut(s) | 290 |
| SspMI | CTAG | 1 cut(s) | 5 |
| TaaI | ACNGT | 1 cut(s) | 190 |
| TaqI | TCGA | 3 cut(s) | 84, 175, 333 |
| TasI | AATT | 1 cut(s) | 297 |
| TauI | GCSGC | 1 cut(s) | 293 |
| TseI | GCWGC | 1 cut(s) | 347 |
| TspDTI | ATGAA | 2 cut(s) | 51, 174 |
| XspI | CTAG | 1 cut(s) | 5 |
| Zsp2I | ATGCAT | 2 cut(s) | 155, 234 |