Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000005

Orthogroup ID

OG0002231

Physical Location & Seq

Genomic Coordinates Forward (+)

31799261 .. 31809546

Gene Structure 10286 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_5G00353840.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3207 bp

ATGAATGAAGAGGAAGTGGAACCTCCACTCGGGGTTCTATTAGGTCGAAAGCGCGGGAAAATGAAGTCCGCCAAGAGAGCAAGGCAAGCAACACCGCACAGCATCGAGCCACTTCAAATCGAACCAGAGCCCGTCCCGATCGATGTGGAGCCAGTTGCAATTGAGCCGGAGCCAGTTGCAATTGAACCAGAGAACTCAAGGAATGGCACTAGGGTTAGTGTTTCGATGTTCGATGACTCGGTGGAGAATCACTTCAGAGTTATGCACACGATTTCCGAGCTCTGTGGCGACGCCGAAGACGAGCCACTCCCGGTGAGCGACATTCAACGCTTATCGTCCTCCACCACTTTCCTGAGGGAATGGGCAGATTTTAAGTATGAACCTAGAGATGTTCGATTCGCTTGCGAAGCAGAAAGCTCTAATGAGGAGGATGTTGTCAGTAGGATAAACTTGCGGCAGTTTTCTTCTGCAACTGTTCCACAGAACGAGGCAGGGAACGCATCTTCTCCAGAGTTGAGGTACTTGATTGAGCTTAGCATTCAACAAGACTATGTGATGTATGTTGGAGGGCCTGTTTGGTCATTGGATTGGTGTCCTAGAGTTCATGAAAGTCATGACCGTCATGCAAAGTGCGAGTTTATTGCCATTGCTGCTCATCCCCCTGGATCTTCTTATCACAAGTTAGGTGAGCCACTTACTGGCAGAGGTGCCATTCAGATATGGTGTCTTCTAAATGCTAGTGTAAATGATGAAGGTGTTCCTATAGGAGACATACCAAAAGGAGGAAATAAAAGGGGTGGAGCCACAGAAAAATGCACTGAACAAAAAAGGGGAAGACCCAGAAAGAAGCCATTAAAAGAATCTGTTGGCAAAGAGGCCACAGAAGAAAAACTGTCTGAGCCAAAAAGGCCGAGAGGAAGACCTAGAAAGAAGCCAATAGAAGAATCTATTGACAAAGAGGCCAAAGAAGAGAAATCAACTCAACCAAAGAGGCCTAGAGGAAGACCTAGAAATAAATCAATAGAGGAATCTGTTGACAACTTGGATGGGAGAACCAATTGTGATGAGGTTCTTGCTATTGATTATCCAAAGGAATCATCTGAGTTGCATTCGATGGATTGTCTTCCTGCAAATACTCGAGGAAATTTTGTACAAGAATCTCATGGAAAAAAGCAACTAAGTTATGGGCGGAGTCAACCGAAGAAGCCTAGAGGAAGACCCAGAAAGAAGCCAATAAAAGAGCCTGTTGACAATTTAGATGGGGGCAACAATAATTTTGAGGTTCTTGCTATTGAATACCAAACGGAATCACTGGAGTTGCATTCTACGGATTGTCTTCTTGCAAATACTCAAGTGGACGCTGTACAAGAAACAAGTTACAAGCAGACTCGATCAAAGAGGCCTAGAGGAATACATGGAAAGAAGCCAATAGAAGAATCTGTTGAAAACTTGGATGACAGCAGCAATACGGGTGAGGCTCTTGATGATCAATATCCAAAGGAATTATTGGAGTTGGAGGGCATGGATTGCGCTCCTGAAAATACTCAAGGAGATGAGGTACAAGATGATAGTGGTAAGAAAAGAAAAATGTACAGAAAGACTCGAGCAAAGATTCCTAGAGAAAAACCTGGGGAGAAGCTAGTAGAATATTCTGTTGATAAGTTGCATGGGAGCAGCCATTATACGGAGGCTCTTGGAGTTCAATATCTCAAGGAAACATCAGAGTTGCATGCTATGGATTGTGTTCCTGCATTTACTCAGGCGCATGATGTACAAGAAGCTCTTAATGAAAAACGTGAAAGTTCCGGACCGGGTCCTCAAACAAATAATAATGTTTCAAATAATGGTTATGCTGAAATTGGCTCAATTAGGTGTTCAGTTCCAAAGGATGTAGCATTGCCAAGAATCATATTCTGCCTAGCTCACCATGGAAAGGTTGCTTGGGATGTGAAATGGCGTCCTCTTAATGAACATGATTCCAGATGCAAGTATCGAATGGGCTATCTTGCTGTTCTGTTGGGGAACGGGTCTCTGGAAGTGTGGGAGGTTCCTGTTCCTCGTGCAATTGAAGTTATTTATTCTTCTTCATCTGGAGAGGGCACTGATCCTCGCTTTGTAAAATTGGCACCAGTATTTAGATGCTCAATGTTGCAGTCTGGTGACAAAAAAAGCATCCCTCTTACTGTGGAATGGTCAGCTTCACCACCTCACGATTACTTAATTGCCGGATGCCATGATGGAACTCAACTATGTGTAACTTTCAGCAATTCAGACAATGCAAATGTTATAGCTACTGCTGGACATGGAGGCCTAAAATTTTGGGACCTACGGTGTGTTCTTCTCTCTTTTGATGATGGAACAATGAGACTTCTCAGCTTGACAAAGGCTGCCTCTGATGCCCCTGTAACAGGAAAACCCTTTGCTGGAACAAAACAACAGGGCCTGCACAATATTGGTTGTTTGCCTTTTGCTATCTGGAGTGTTCAAGTATCAAGACTAACAGGTATGGTTGCATATTGTGGTGCAGATGGAAGTGTTCTGCGCTTCCAACTTACGTCCAATGCTGTGGAGAAAGATGCTACACGAAACCGGGCCCCACATTTTCTCTGCGTGTCACTAACTGAAGAGGACTCTGTTGTGACCATCAATACCCCAGTACCACATAATCCTTTCCCGTTGAAAACGTCTCGTAAAGCTGAGCCAAACAAGGTGAAGAGAGAACATGATAAGATGACAACTACATCACAAGATCAAGTTTTAGCTCTTTGTTACGGTGATGATCCGGGTATTGAATTAGAATCTGGGAAAGAAGCAGCATCTCTTAGAAGCAAAACACTCAAATCTGCGGATGACCGAGCATTAGTATGCATGGATCAAGAGCCATTTAATACCCAAGACGAAGAAATTGGAGAGAAGGCTACATCTCTTATAGGCATTGTAAAACAGAAATCCAAGTCTAGTAAGAAAAATACAGAGGATGAACAAGAACTGGAAGGCAGAGAAGAAGAGCTGATTAATACGCAGAGAGAAAAAACTGGGACCGAGTATGAAGTTTTTCCTTCCAAGCAAGTAGCAATGCACCGAGTGAGATGGAACATGAACAAGGGTAGTGAGAGATGGTTATGCTCTGGAGGGGCAGCTGGAATAGTACGTTGTCAAGAGATTGTTTTGTCTGACATTGATATGAAATGGGCAAGGAAGAAATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

AT_hook

Protein Analysis

1068

Amino Acids

118.94

Weight (kDa)

6.02

Isoelectric Point (pI)

48.84

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002231)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G19485 AT1G19485
fragaria_vesca	FvH4_6g18260 FvH4_6g18260 FvH4_6g18260 FvH4_6g18260 FvH4_7g02500
malus_domestica	MD09G1081300.v1.1 MD12G1022600.v1.1
prunus_persica	Prupe.7G114200_v2.0.a1 Prupe.7G114200_v2.0.a1
pyrus_communis	pycom09g00800 pycom12g02090
rosa_chinensis	RchiOBHm_Chr3g0472691 RchiOBHm_Chr3g0472701 RchiOBHm_Chr4g0409331
rosa_laevigata	RLG00000008568 RLG00000016132 RLG00000024063
rosa_multiflora	Rmu_co8285783.1_g000001 Rmu_sc0001616.1_g000052 Rmu_sc0001616.1_g000057 Rmu_sc0001851.1_g000016 Rmu_sc0003510.1_g000010 Rmu_sc0003510.1_g000011 Rmu_sc0003510.1_g000012 Rmu_sc0034965.1_g000001
rosa_roxburghii	Rroxscaffold_5G00353840 Rroxscaffold_6G00408710
rosa_rugosa	Rorug03G0127200 Rorug04G0092400 Rorug04G0092500
rosa_samantha	Rh3AG179900 Rh3BG205800 Rh3CG202900 Rh3DG169900 Rh4AG155600 Rh4BG153800 Rh4CG164600 Rh4DG148500
rosa_wichuraiana	Rw3G016270 Rw4G012710 Rw4G012730

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	2 cut(s)	707, 2125
AccB7I	CCANNNNNTGG	1 cut(s)	698
AccII	CGCG	1 cut(s)	54
AccIII	TCCGGA	1 cut(s)	1805
AciI	CCGC	6 cut(s)	54, 69, 95, 454, 1189, 2846
AclWI	GGATC	4 cut(s)	673, 2099, 2774, 2880
AcsI	RAATTY	2 cut(s)	1144, 2315
AcuI	CTGAAG	2 cut(s)	238, 2643
AcyI	GRCGYC	2 cut(s)	291, 1957
AdeI	CACNNNGTG	1 cut(s)	3085
AfaI	GTAC	8 cut(s)	521, 1152, 1365, 1560, 1592, 1773, 2658, 3150
AfiI	CCNNNNNNNGG	7 cut(s)	29, 698, 782, 1684, 1933, 2408, 2423
AjnI	CCWGG	2 cut(s)	661, 1627
AjuI	GAANNNNNNNTTGG	2 cut(s)	1924, 1956
Alw21I	GWGCWC	1 cut(s)	282
Alw26I	GTCTC	4 cut(s)	762, 2034, 2359, 2691
AlwI	GGATC	4 cut(s)	673, 2099, 2774, 2880
AlwNI	CAGNNNCTG	1 cut(s)	2443
Ama87I	CYCGRG	3 cut(s)	29, 1137, 1602
Aor13HI	TCCGGA	1 cut(s)	1805
AoxI	GGCC	9 cut(s)	569, 876, 908, 960, 992, 1400, 2308, 2440, 2592
ApaI	GGGCCC	1 cut(s)	2596
ApeKI	GCWGC	6 cut(s)	650, 1461, 1674, 2387, 2813, 3137
ApoI	RAATTY	2 cut(s)	1144, 2315
AseI	ATTAAT	1 cut(s)	3015
Asp700I	GAANNNNTTC	3 cut(s)	251, 756, 3054
AspLEI	GCGC	4 cut(s)	54, 1532, 1765, 2544
AspS9I	GGNCC	8 cut(s)	569, 1808, 1814, 2323, 2440, 2592, 2593, 3039
AsuC2I	CCSGG	4 cut(s)	311, 1812, 2591, 2784
AsuHPI	GGTGA	8 cut(s)	325, 698, 1484, 1916, 2171, 2193, 2722, 2786
AvaI	CYCGRG	3 cut(s)	29, 1137, 1602
AvaII	GGWCC	4 cut(s)	1808, 1814, 2323, 3039
AxyI	CCTNAGG	1 cut(s)	353
BaeGI	GKGCMC	2 cut(s)	2102, 2596
BaeI	ACNNNNGTAYC	2 cut(s)	2640, 2673
BanI	GGYRCC	2 cut(s)	707, 2125
BanII	GRGCYC	3 cut(s)	132, 282, 2596
BauI	CACGAG	1 cut(s)	2058
BbsI	GAAGAC	8 cut(s)	303, 719, 841, 925, 1009, 1115, 1222, 1328
Bbv12I	GWGCWC	1 cut(s)	282
BbvI	GCAGC	6 cut(s)	637, 1473, 1686, 2374, 2825, 3149
BccI	CCATC	9 cut(s)	1040, 1108, 1253, 2231, 2348, 2522, 2651, 3084, 3111
BcgI	CGANNNNNNTGC	4 cut(s)	384, 418, 623, 657
BciT130I	CCWGG	2 cut(s)	663, 1629
BclI	TGATCA	1 cut(s)	1486
BcnI	CCSGG	4 cut(s)	311, 1812, 2591, 2784
BcoDI	GTCTC	4 cut(s)	762, 2034, 2359, 2691
BfmI	CTRYAG	1 cut(s)	762
BglI	GCCNNNNNGGC	1 cut(s)	907
BisI	GCNGC	7 cut(s)	455, 651, 1462, 1675, 2388, 2814, 3138
BlpI	GCTNAGC	2 cut(s)	533, 2697
BlsI	GCNGC	7 cut(s)	456, 652, 1463, 1676, 2389, 2815, 3139
Bme1390I	CCNGG	6 cut(s)	311, 663, 1629, 1812, 2591, 2784
Bme18I	GGWCC	4 cut(s)	1808, 1814, 2323, 3039
BmeT110I	CYCGRG	3 cut(s)	29, 1137, 1602
BmgT120I	GGNCC	8 cut(s)	569, 1808, 1814, 2323, 2440, 2592, 2593, 3039
BmrFI	CCNGG	6 cut(s)	311, 663, 1629, 1812, 2591, 2784
BmrI	ACTGGG	2 cut(s)	2648, 3045
BmsI	GCATC	9 cut(s)	111, 509, 1973, 2129, 2181, 2219, 2386, 2566, 2825
BmuI	ACTGGG	2 cut(s)	2648, 3045
BpiI	GAAGAC	8 cut(s)	303, 719, 841, 925, 1009, 1115, 1222, 1328
BpmI	CTGGAG	5 cut(s)	492, 1334, 2112, 2497, 3150
Bpu1102I	GCTNAGC	2 cut(s)	533, 2697
BpuEI	CTTGAG	4 cut(s)	181, 1335, 1530, 1694
BpuMI	CCSGG	4 cut(s)	311, 1812, 2591, 2784
Bsa29I	ATCGAT	1 cut(s)	141
BsaBI	GATNNNNATC	1 cut(s)	1491
BsaHI	GRCGYC	2 cut(s)	291, 1957
BsaI	GGTCTC	1 cut(s)	2034
BsaJI	CCNNGG	3 cut(s)	661, 1628, 1927
BsaWI	WCCGGW	1 cut(s)	1805
BsaXI	ACNNNNNCTCC	4 cut(s)	558, 588, 1542, 1572
Bsc4I	CCNNNNNNNGG	7 cut(s)	29, 698, 782, 1684, 1933, 2408, 2423
Bse1I	ACTGG	8 cut(s)	152, 173, 703, 1317, 2129, 2654, 2994, 3040
Bse21I	CCTNAGG	1 cut(s)	353
Bse3DI	GCAATG	3 cut(s)	645, 1895, 3081
Bse8I	GATNNNNATC	1 cut(s)	1491
BseAI	TCCGGA	1 cut(s)	1805
BseBI	CCWGG	2 cut(s)	663, 1629
BseCI	ATCGAT	1 cut(s)	141
BseDI	CCNNGG	3 cut(s)	661, 1628, 1927
BseJI	GATNNNNATC	1 cut(s)	1491
BseLI	CCNNNNNNNGG	7 cut(s)	29, 698, 782, 1684, 1933, 2408, 2423
BseMI	GCAATG	3 cut(s)	645, 1895, 3081
BseMII	CTCAG	6 cut(s)	344, 888, 1092, 1772, 2386, 2688
BseNI	ACTGG	8 cut(s)	152, 173, 703, 1317, 2129, 2654, 2994, 3040
BseRI	GAGGAG	1 cut(s)	440
BseSI	GKGCMC	2 cut(s)	2102, 2596
BseXI	GCAGC	6 cut(s)	637, 1473, 1686, 2374, 2825, 3149
BsgI	GTGCAG	2 cut(s)	2429, 2544
Bsh1236I	CGCG	1 cut(s)	54
Bsh1285I	CGRYCG	1 cut(s)	141
BshFI	GGCC	9 cut(s)	571, 878, 910, 962, 994, 1402, 2310, 2442, 2594
BshNI	GGYRCC	2 cut(s)	707, 2125
BshVI	ATCGAT	1 cut(s)	141
BsiEI	CGRYCG	1 cut(s)	141
BsiHKAI	GWGCWC	1 cut(s)	282
BsiHKCI	CYCGRG	3 cut(s)	29, 1137, 1602
BsiSI	CCGG	7 cut(s)	167, 311, 1806, 1811, 2226, 2590, 2783
BslFI	GGGAC	3 cut(s)	119, 2336, 3052
BslI	CCNNNNNNNGG	7 cut(s)	29, 698, 782, 1684, 1933, 2408, 2423
BsmAI	GTCTC	4 cut(s)	762, 2034, 2359, 2691
BsmBI	CGTCTC	1 cut(s)	2691
BsmFI	GGGAC	3 cut(s)	119, 2336, 3052
BsmI	GAATGC	3 cut(s)	537, 1108, 1321
BsnI	GGCC	9 cut(s)	571, 878, 910, 962, 994, 1402, 2310, 2442, 2594
Bso31I	GGTCTC	1 cut(s)	2034
BsoBI	CYCGRG	3 cut(s)	29, 1137, 1602
Bsp120I	GGGCCC	1 cut(s)	2592
Bsp1286I	GDGCHC	4 cut(s)	132, 282, 2102, 2596
Bsp13I	TCCGGA	1 cut(s)	1805
Bsp1407I	TGTACA	4 cut(s)	1150, 1363, 1590, 1771
Bsp143I	GATC	8 cut(s)	138, 665, 1391, 1486, 2104, 2749, 2779, 2872
Bsp1720I	GCTNAGC	2 cut(s)	533, 2697
Bsp19I	CCATGG	1 cut(s)	1927
BspACI	CCGC	6 cut(s)	54, 69, 95, 454, 1189, 2846
BspANI	GGCC	9 cut(s)	571, 878, 910, 962, 994, 1402, 2310, 2442, 2594
BspCNI	CTCAG	6 cut(s)	345, 889, 1093, 1771, 2385, 2689
BspDI	ATCGAT	1 cut(s)	141
BspEI	TCCGGA	1 cut(s)	1805
BspFNI	CGCG	1 cut(s)	54
BspHI	TCATGA	2 cut(s)	604, 613
BspPI	GGATC	4 cut(s)	673, 2099, 2774, 2880
BspQI	GCTCTTC	1 cut(s)	3000
BspT107I	GGYRCC	2 cut(s)	707, 2125
BspTNI	GGTCTC	1 cut(s)	2034
BsrDI	GCAATG	3 cut(s)	645, 1895, 3081
BsrGI	TGTACA	4 cut(s)	1150, 1363, 1590, 1771
BsrI	ACTGG	8 cut(s)	152, 173, 703, 1317, 2129, 2654, 2994, 3040
BssECI	CCNNGG	3 cut(s)	661, 1628, 1927
BssMI	GATC	8 cut(s)	138, 665, 1391, 1486, 2104, 2749, 2779, 2872
BssNI	GRCGYC	2 cut(s)	291, 1957
BssSI	CACGAG	1 cut(s)	2058
BssT1I	CCWWGG	1 cut(s)	1927
Bst2BI	CACGAG	1 cut(s)	2058
Bst2UI	CCWGG	2 cut(s)	663, 1629
Bst4CI	ACNGT	6 cut(s)	475, 620, 894, 2185, 2331, 2774
Bst6I	CTCTTC	5 cut(s)	3, 963, 2619, 2708, 3000
BstACI	GRCGYC	2 cut(s)	291, 1957
BstAPI	GCANNNNNTGC	1 cut(s)	1527
BstAUI	TGTACA	4 cut(s)	1150, 1363, 1590, 1771
BstC8I	GCNNGC	4 cut(s)	87, 403, 1731, 2444
BstDEI	CTNAG	9 cut(s)	353, 533, 897, 1101, 1178, 1758, 2372, 2697, 2822
BstDSI	CCRYGG	1 cut(s)	1927
BstENI	CCTNNNNNAGG	1 cut(s)	2406
BstFNI	CGCG	1 cut(s)	54
BstHHI	GCGC	4 cut(s)	54, 1532, 1765, 2544
BstKTI	GATC	8 cut(s)	141, 668, 1394, 1489, 2107, 2752, 2782, 2875
BstMAI	GTCTC	4 cut(s)	762, 2034, 2359, 2691
BstMBI	GATC	8 cut(s)	138, 665, 1391, 1486, 2104, 2749, 2779, 2872
BstMCI	CGRYCG	1 cut(s)	141
BstMWI	GCNNNNNNNGC	8 cut(s)	77, 86, 407, 497, 650, 907, 1527, 2396
BstNI	CCWGG	2 cut(s)	663, 1629
BstNSI	RCATGY	1 cut(s)	1733
BstSCI	CCNGG	6 cut(s)	309, 661, 1627, 1810, 2589, 2782
BstSFI	CTRYAG	1 cut(s)	762
BstSLI	GKGCMC	2 cut(s)	2102, 2596
BstUI	CGCG	1 cut(s)	54
BstV1I	GCAGC	6 cut(s)	637, 1473, 1686, 2374, 2825, 3149
BstV2I	GAAGAC	8 cut(s)	303, 719, 841, 925, 1009, 1115, 1222, 1328
BstX2I	RGATCY	1 cut(s)	665
BstXI	CCANNNNNNTGG	1 cut(s)	2566
BstYI	RGATCY	1 cut(s)	665
Bsu15I	ATCGAT	1 cut(s)	141
Bsu36I	CCTNAGG	1 cut(s)	353
BsuRI	GGCC	9 cut(s)	571, 878, 910, 962, 994, 1402, 2310, 2442, 2594
BsuTUI	ATCGAT	1 cut(s)	141
BtgI	CCRYGG	1 cut(s)	1927
BtsIMutI	CAGTG	3 cut(s)	816, 1310, 2100
Cac8I	GCNNGC	4 cut(s)	87, 403, 1731, 2444
CaiI	CAGNNNCTG	1 cut(s)	2443
CciI	TCATGA	2 cut(s)	604, 613
CfoI	GCGC	4 cut(s)	54, 1532, 1765, 2544
Cfr13I	GGNCC	8 cut(s)	569, 1808, 1814, 2323, 2440, 2592, 2593, 3039
ClaI	ATCGAT	1 cut(s)	141
CpoI	CGGWCCG	1 cut(s)	1808
CseI	GACGC	3 cut(s)	299, 1367, 1946
Csp6I	GTAC	8 cut(s)	520, 1151, 1364, 1559, 1591, 1772, 2657, 3149
CspI	CGGWCCG	1 cut(s)	1808
CviQI	GTAC	8 cut(s)	520, 1151, 1364, 1559, 1591, 1772, 2657, 3149
DdeI	CTNAG	9 cut(s)	353, 533, 897, 1101, 1178, 1758, 2372, 2697, 2822
DpnI	GATC	8 cut(s)	140, 667, 1393, 1488, 2106, 2751, 2781, 2874
DpnII	GATC	8 cut(s)	138, 665, 1391, 1486, 2104, 2749, 2779, 2872
DraIII	CACNNNGTG	1 cut(s)	3085
Eam1104I	CTCTTC	5 cut(s)	3, 963, 2619, 2708, 3000
EarI	CTCTTC	5 cut(s)	3, 963, 2619, 2708, 3000
EciI	GGCGGA	2 cut(s)	58, 1204
Ecl136II	GAGCTC	1 cut(s)	280
Eco130I	CCWWGG	1 cut(s)	1927
Eco147I	AGGCCT	3 cut(s)	994, 1402, 2310
Eco24I	GRGCYC	3 cut(s)	132, 282, 2596
Eco31I	GGTCTC	1 cut(s)	2034
Eco47I	GGWCC	4 cut(s)	1808, 1814, 2323, 3039
Eco53kI	GAGCTC	1 cut(s)	280
Eco57I	CTGAAG	2 cut(s)	238, 2643
Eco81I	CCTNAGG	1 cut(s)	353
Eco88I	CYCGRG	3 cut(s)	29, 1137, 1602
EcoICRI	GAGCTC	1 cut(s)	280
EcoNI	CCTNNNNNAGG	1 cut(s)	2406
EcoO109I	RGGNCCY	5 cut(s)	569, 1814, 2323, 2440, 2593
EcoRII	CCWGG	2 cut(s)	661, 1627
EcoT14I	CCWWGG	1 cut(s)	1927
EcoT22I	ATGCAT	1 cut(s)	2870
EcoT38I	GRGCYC	3 cut(s)	132, 282, 2596
ErhI	CCWWGG	1 cut(s)	1927
Esp3I	CGTCTC	1 cut(s)	2691
FalI	AAGNNNNNCTT	2 cut(s)	1767, 1799
FaqI	GGGAC	3 cut(s)	119, 2336, 3052
FauI	CCCGC	1 cut(s)	47
FbaI	TGATCA	1 cut(s)	1486
Fnu4HI	GCNGC	7 cut(s)	455, 651, 1462, 1675, 2388, 2814, 3138
FriOI	GRGCYC	3 cut(s)	132, 282, 2596
Fsp4HI	GCNGC	7 cut(s)	455, 651, 1462, 1675, 2388, 2814, 3138
GlaI	GCGC	4 cut(s)	53, 1531, 1764, 2543
GluI	GCNGC	7 cut(s)	455, 651, 1462, 1675, 2388, 2814, 3138
GsuI	CTGGAG	5 cut(s)	492, 1334, 2112, 2497, 3150
HaeIII	GGCC	9 cut(s)	571, 878, 910, 962, 994, 1402, 2310, 2442, 2594
HapII	CCGG	7 cut(s)	167, 311, 1806, 1811, 2226, 2590, 2783
HgaI	GACGC	3 cut(s)	299, 1367, 1946
HhaI	GCGC	4 cut(s)	54, 1532, 1765, 2544
Hin1I	GRCGYC	2 cut(s)	291, 1957
Hin6I	GCGC	4 cut(s)	52, 1530, 1763, 2542
HinP1I	GCGC	4 cut(s)	52, 1530, 1763, 2542
HincII	GTYRAC	3 cut(s)	1036, 1196, 1249
HindII	GTYRAC	3 cut(s)	1036, 1196, 1249
HpaII	CCGG	7 cut(s)	167, 311, 1806, 1811, 2226, 2590, 2783
HphI	GGTGA	8 cut(s)	325, 698, 1484, 1916, 2171, 2193, 2722, 2786
Hpy166II	GTNNAC	4 cut(s)	1036, 1196, 1249, 1357
Hpy188I	TCNGA	9 cut(s)	257, 277, 717, 898, 1102, 1723, 2272, 2395, 3175
Hpy8I	GTNNAC	4 cut(s)	1036, 1196, 1249, 1357
Hpy99I	CGWCG	1 cut(s)	293
HpyAV	CCTTC	4 cut(s)	746, 2908, 2987, 3069
HpyCH4III	ACNGT	6 cut(s)	475, 620, 894, 2185, 2331, 2774
HpyCH4IV	ACGT	4 cut(s)	1795, 2555, 2684, 3151
HpyF10VI	GCNNNNNNNGC	8 cut(s)	77, 86, 407, 497, 650, 907, 1527, 2396
HpyF3I	CTNAG	9 cut(s)	353, 533, 897, 1101, 1178, 1758, 2372, 2697, 2822
HpySE526I	ACGT	4 cut(s)	1795, 2555, 2684, 3151
Hsp92I	GRCGYC	2 cut(s)	291, 1957
HspAI	GCGC	4 cut(s)	52, 1530, 1763, 2542
Kpn2I	TCCGGA	1 cut(s)	1805
Ksp22I	TGATCA	1 cut(s)	1486
Kzo9I	GATC	8 cut(s)	138, 665, 1391, 1486, 2104, 2749, 2779, 2872
LguI	GCTCTTC	1 cut(s)	3000
LmnI	GCTCC	5 cut(s)	148, 169, 800, 1537, 1671
Lsp1109I	GCAGC	6 cut(s)	637, 1473, 1686, 2374, 2825, 3149
LweI	GCATC	9 cut(s)	111, 509, 1973, 2129, 2181, 2219, 2386, 2566, 2825
MaeII	ACGT	4 cut(s)	1795, 2555, 2684, 3151
MaeIII	GTNAC	7 cut(s)	1376, 2159, 2254, 2404, 2613, 2638, 2768
MalI	GATC	8 cut(s)	140, 667, 1393, 1488, 2106, 2751, 2781, 2874
MboI	GATC	8 cut(s)	138, 665, 1391, 1486, 2104, 2749, 2779, 2872
MfeI	CAATTG	4 cut(s)	159, 180, 1057, 2064
MflI	RGATCY	1 cut(s)	665
MhlI	GDGCHC	4 cut(s)	132, 282, 2102, 2596
MlyI	GAGTC	5 cut(s)	230, 1201, 1381, 1594, 2624
MmeI	TCCRAC	3 cut(s)	544, 1494, 2572
Mph1103I	ATGCAT	1 cut(s)	2870
MroI	TCCGGA	1 cut(s)	1805
MroXI	GAANNNNTTC	3 cut(s)	251, 756, 3054
MseI	TTAA	7 cut(s)	372, 854, 1785, 1965, 2219, 2886, 3015
MslI	CAYNNNNRTG	2 cut(s)	2863, 3182
MspA1I	CMGCKG	1 cut(s)	3140
MspI	CCGG	7 cut(s)	167, 311, 1806, 1811, 2226, 2590, 2783
MspR9I	CCNGG	6 cut(s)	311, 663, 1629, 1812, 2591, 2784
MunI	CAATTG	4 cut(s)	159, 180, 1057, 2064
Mva1269I	GAATGC	3 cut(s)	537, 1108, 1321
MvaI	CCWGG	2 cut(s)	663, 1629
MvnI	CGCG	1 cut(s)	54
MwoI	GCNNNNNNNGC	8 cut(s)	77, 86, 407, 497, 650, 907, 1527, 2396
NciI	CCSGG	4 cut(s)	311, 1812, 2591, 2784
NcoI	CCATGG	1 cut(s)	1927
NdeII	GATC	8 cut(s)	138, 665, 1391, 1486, 2104, 2749, 2779, 2872
NmeAIII	GCCGAG	1 cut(s)	936
NmuCI	GTSAC	3 cut(s)	2159, 2613, 2638
NsiI	ATGCAT	1 cut(s)	2870
NspI	RCATGY	1 cut(s)	1733
PaeI	GCATGC	1 cut(s)	1733
PaeR7I	CTCGAG	2 cut(s)	1137, 1602
PagI	TCATGA	2 cut(s)	604, 613
PceI	AGGCCT	3 cut(s)	994, 1402, 2310
PciSI	GCTCTTC	1 cut(s)	3000
PcsI	WCGNNNNNNNCGW	1 cut(s)	297
PctI	GAATGC	3 cut(s)	537, 1108, 1321
PdmI	GAANNNNTTC	3 cut(s)	251, 756, 3054
PflFI	GACNNNGTC	1 cut(s)	1812
PflMI	CCANNNNNTGG	1 cut(s)	698
PkrI	GCNGC	7 cut(s)	456, 652, 1463, 1676, 2389, 2815, 3139
Ple19I	CGATCG	1 cut(s)	141
PleI	GAGTC	5 cut(s)	230, 1200, 1381, 1594, 2624
PpsI	GAGTC	5 cut(s)	230, 1200, 1381, 1594, 2624
PpuMI	RGGWCCY	2 cut(s)	1814, 2323
PshBI	ATTAAT	1 cut(s)	3015
Psp124BI	GAGCTC	1 cut(s)	282
Psp5II	RGGWCCY	2 cut(s)	1814, 2323
Psp6I	CCWGG	2 cut(s)	661, 1627
PspGI	CCWGG	2 cut(s)	661, 1627
PspOMI	GGGCCC	1 cut(s)	2592
PspPI	GGNCC	8 cut(s)	569, 1808, 1814, 2323, 2440, 2592, 2593, 3039
PspPPI	RGGWCCY	2 cut(s)	1814, 2323
PspXI	VCTCGAGB	2 cut(s)	1137, 1602
PstNI	CAGNNNCTG	1 cut(s)	2443
PsuI	RGATCY	1 cut(s)	665
PsyI	GACNNNGTC	1 cut(s)	1812
PvuI	CGATCG	1 cut(s)	141
PvuII	CAGCTG	1 cut(s)	3140
RsaI	GTAC	8 cut(s)	521, 1152, 1365, 1560, 1592, 1773, 2658, 3150
RsaNI	GTAC	8 cut(s)	520, 1151, 1364, 1559, 1591, 1772, 2657, 3149
RseI	CAYNNNNRTG	2 cut(s)	2863, 3182
Rsr2I	CGGWCCG	1 cut(s)	1808
RsrII	CGGWCCG	1 cut(s)	1808
SacI	GAGCTC	1 cut(s)	282
SapI	GCTCTTC	1 cut(s)	3000
SaqAI	TTAA	7 cut(s)	372, 854, 1785, 1965, 2219, 2886, 3015
SatI	GCNGC	7 cut(s)	455, 651, 1462, 1675, 2388, 2814, 3138
Sau3AI	GATC	8 cut(s)	138, 665, 1391, 1486, 2104, 2749, 2779, 2872
Sau96I	GGNCC	8 cut(s)	569, 1808, 1814, 2323, 2440, 2592, 2593, 3039
SchI	GAGTC	5 cut(s)	230, 1201, 1381, 1594, 2624
ScrFI	CCNGG	6 cut(s)	311, 663, 1629, 1812, 2591, 2784
SduI	GDGCHC	4 cut(s)	132, 282, 2102, 2596
SfaNI	GCATC	9 cut(s)	111, 509, 1973, 2129, 2181, 2219, 2386, 2566, 2825
SfcI	CTRYAG	1 cut(s)	762
Sfr274I	CTCGAG	2 cut(s)	1137, 1602
SinI	GGWCC	4 cut(s)	1808, 1814, 2323, 3039
SlaI	CTCGAG	2 cut(s)	1137, 1602
SmiMI	CAYNNNNRTG	2 cut(s)	2863, 3182
SmlI	CTYRAG	6 cut(s)	196, 1137, 1350, 1545, 1602, 1709
SmoI	CTYRAG	6 cut(s)	196, 1137, 1350, 1545, 1602, 1709
SphI	GCATGC	1 cut(s)	1733
SseBI	AGGCCT	3 cut(s)	994, 1402, 2310
SsiI	CCGC	6 cut(s)	54, 69, 95, 454, 1189, 2846
SspI	AATATT	2 cut(s)	1649, 2452
SstI	GAGCTC	1 cut(s)	282
StuI	AGGCCT	3 cut(s)	994, 1402, 2310
StyD4I	CCNGG	6 cut(s)	309, 661, 1627, 1810, 2589, 2782
StyI	CCWWGG	1 cut(s)	1927
TaaI	ACNGT	6 cut(s)	475, 620, 894, 2185, 2331, 2774
TaiI	ACGT	4 cut(s)	1798, 2558, 2687, 3154
TaqII	GACCGA	2 cut(s)	2868, 3056
TatI	WGTACW	4 cut(s)	1150, 1363, 1590, 1771
TauI	GCSGC	1 cut(s)	457
Tru1I	TTAA	7 cut(s)	372, 854, 1785, 1965, 2219, 2886, 3015
Tru9I	TTAA	7 cut(s)	372, 854, 1785, 1965, 2219, 2886, 3015
TscAI	CASTG	3 cut(s)	823, 1317, 2107
TseFI	GTSAC	3 cut(s)	2159, 2613, 2638
TseI	GCWGC	6 cut(s)	650, 1461, 1674, 2387, 2813, 3137
Tsp45I	GTSAC	3 cut(s)	2159, 2613, 2638
TspGWI	ACGGA	3 cut(s)	1319, 1343, 1700
TspRI	CASTG	3 cut(s)	823, 1317, 2107
Tth111I	GACNNNGTC	1 cut(s)	1812
Van91I	CCANNNNNTGG	1 cut(s)	698
VpaK11BI	GGWCC	4 cut(s)	1808, 1814, 2323, 3039
VspI	ATTAAT	1 cut(s)	3015
XagI	CCTNNNNNAGG	1 cut(s)	2406
XapI	RAATTY	2 cut(s)	1144, 2315
XceI	RCATGY	1 cut(s)	1733
XhoI	CTCGAG	2 cut(s)	1137, 1602
XmnI	GAANNNNTTC	3 cut(s)	251, 756, 3054
Zsp2I	ATGCAT	1 cut(s)	2870

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.