Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr4C

Orthogroup ID

OG0002231

Physical Location & Seq

Genomic Coordinates Forward (+)

36365109 .. 36375561

Gene Structure 10453 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh4CG164600.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2403 bp

ATGAATGAAGACGAAGTGGAACCTCCACTCGGGGTTCTATTGGGTCGAAAGCGCGGGAAAACGAAGTCCGCCAAGAGAGCAAGCCAAGTAACACCGCACAGCACAGAGCCACTTCAAATCGAACCAGAGCCTGTCCCGATCGATGCGGAGCCAATTCAAATTGAGTCAGAGCCAATTGCAATTGAGCCAGAGAACTCAAGGAATGGCGCTAGGGTTAGTGTTTCGATGTTCGATGACTCGGTGGAGAATCACTTTAGAGTCATGCACACGATTTCTGAGCTCTGTGGCGACGCCGAAGACGAGCCACTCCCGGTGAGCGACATTCAACGCTTATCATCCTCCACCACTTTCTTGAGGGAATGGGCAGATTTTAAGTATGAACCTAGAGATGTTCGATTCGCTTGCGAAGCAGAAAGCTCTGATGAGGAGGATGTTGTCAGTAGGATAAACTTGCGGCAGTTTTCTTCTGCAACTGTTCCACAGAACGAGGCGGGGAACACATCTTCTCCAGAGTTGAGACAAGACTATGTGATGTATGTTGGAGGGCCTGTTTGGGCATTGGATTGGTGTCCTAGAGTTCATGAAAGTCACGACCGTCATGCAAAGTGCGAGTTTATTGCCATTTCTGCTCATCCCCCTGGATCTTCTTATCACAAGTTAGGTGAGCCACTTACTGGCAGAGGTGCCATTCAGATATGGTGTCTTCTAAATGCTAGTGTAAATGATGAAGGTGTTCCTATAGGAGACAAACCAAAAGGAGGAAATAAAAGGAGTGGAGCCACAGAAAAATGCACTGAACAAAAAAGGGGAAGACCCAGAAAGAAGCCATTAGAAGAATCTGTTGGCAAAGAGGCCACAGAAGAAAAACTGTCTGAGCCAAAAAGGCCGAGAGGAAGACCTAGAAAGAAGCCAATAGAAGAATCTATTGACAAAGAGGCCAAAGAAGAGAAATCAACTCAACCAAAGAGGCCTAGAGGAAGACCTAGAAATAAATCAATACAAGAATCTGTTGACAACTTGGATGGTCTCACCAATTGTGATGAGGTTCTTGCTATTGATTATCCAAAGGAATCATCTGAGTTGCATTCTATGGATTGTCTTCCTGCAAATACTCAAGGAAATTTTGTACAAGAATATCATGGCAAAAAGCAACTAAGTTATGGGCAGAGTCAACCGAAGAAGCCTAGAGGAAGACCCAGAAAGAAGCCAATAAAAGAACCTGTTGACAATTTAGATGGGGGCAACAATAATTTTGAGGTTCTTGCTATTGAATACCAAAAGGAATTACTGGAGTTGCATTCTACGGATTGTCTTCTTGCAAATACTCAAGTGGACGCTGTACAAGAAACAAGTTACAAGCAGACTCGATCAAAGAGGCCTAGAGGAATACATGGAAAGAAGCCAATAGAAGAATCTGTTGAAAACTTGGATGACAGCAGCAATACGGGTGAGGCTCTTGATGATCAATATCCAAAGGAATTATTGGAGTTGGAGGGCAGGGATTGCGCTCCTGAAAATACTCAAGGAGATGAGGTACAAGATGATAGTGGTAAGAAAAGAAAAACTTACAGAAAGACTCGAGCAAAGATTCCTAGAGAAAAACCTGGGGAGAAGCTAGTAGAATATTCTGTTGATAACTTGCATGGGAGCAGCCATTATGCGGAGGCTCTTGGAGTCCAATATCTCAAGGAAACATCAGAGTTGCATGCTATGGATTGTGTTCCTGCATTTACTCAGGCGCATGATGTACAAGAAGCTCTTAATGAAAAACTTGAAAGTTCCGGACCGGGTCCTCAAACAAATAATAATGTTTCAAATAATGGTTATGCTGAAATTGGCTCAATTAGGTGTTCAGTTCCAAAGGATGTAGCATTGCCAAGAATCATATTCTGCCTAGCTCACCATGGAAAGGTTGCTTGGGATGTGAAATGGCGTCCTCTTAATGAACATGATTCCAGATGCAAGCATCGAATGGGCTATCTTGCTGTTCTGTTGGGGAACGGGTCTCTGGAAGTGTGGGAGGTTCCTGTTCCTCGTGCAATTGAAGTTATTTATTCTTCTTCATCTGGAGAGGGCACTGATCCTCGCTTTGTAAAATTGGCACCAGTATTTAGATGCTCAATGTTGCAGTCTGGTGACAAAAAAAGCATCCCTCTTACTGTGGAATGGTCAGCTTCACCACCTCACGATTACTTAATTGCCGGATGCCATGATGGAACTGTTGCTATGTGGAAGTTTTCTGCTAGTAATGTATCTCAAGATACAAGGCCTTTACTTTGTTTCAGCGCAGATACAAATCCTATTAGGGCGCTTTCTTGGGCCCCAGCTCAAAGCAATTCAGACAATGCAAATGTTATAGCTACTGCTGGACATGGAGGCCTCAAATTTTGGGACCTACGGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

AT_hook

Protein Analysis

800

Amino Acids

89.05

Weight (kDa)

5.79

Isoelectric Point (pI)

45.19

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002231)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G19485 AT1G19485
fragaria_vesca	FvH4_6g18260 FvH4_6g18260 FvH4_6g18260 FvH4_6g18260 FvH4_7g02500
malus_domestica	MD09G1081300.v1.1 MD12G1022600.v1.1
prunus_persica	Prupe.7G114200_v2.0.a1 Prupe.7G114200_v2.0.a1
pyrus_communis	pycom09g00800 pycom12g02090
rosa_chinensis	RchiOBHm_Chr3g0472691 RchiOBHm_Chr3g0472701 RchiOBHm_Chr4g0409331
rosa_laevigata	RLG00000008568 RLG00000016132 RLG00000024063
rosa_multiflora	Rmu_co8285783.1_g000001 Rmu_sc0001616.1_g000052 Rmu_sc0001616.1_g000057 Rmu_sc0001851.1_g000016 Rmu_sc0003510.1_g000010 Rmu_sc0003510.1_g000011 Rmu_sc0003510.1_g000012 Rmu_sc0034965.1_g000001
rosa_roxburghii	Rroxscaffold_5G00353840 Rroxscaffold_6G00408710
rosa_rugosa	Rorug03G0127200 Rorug04G0092400 Rorug04G0092500
rosa_samantha	Rh3AG179900 Rh3BG205800 Rh3CG202900 Rh3DG169900 Rh4AG155600 Rh4BG153800 Rh4CG164600 Rh4DG148500
rosa_wichuraiana	Rw3G016270 Rw4G012710 Rw4G012730

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	2 cut(s)	683, 2101
AccB7I	CCANNNNNTGG	1 cut(s)	674
AccII	CGCG	1 cut(s)	54
AccIII	TCCGGA	1 cut(s)	1781
AciI	CCGC	7 cut(s)	54, 69, 95, 146, 454, 491, 1661
AclWI	GGATC	2 cut(s)	649, 2075
AcsI	RAATTY	2 cut(s)	1120, 2384
AcyI	GRCGYC	2 cut(s)	291, 1933
AfaI	GTAC	4 cut(s)	1128, 1341, 1536, 1749
AfiI	CCNNNNNNNGG	5 cut(s)	29, 674, 758, 1660, 1909
AgsI	TTSAA	8 cut(s)	116, 158, 326, 1271, 1421, 1775, 1815, 2045
AjnI	CCWGG	2 cut(s)	637, 1603
AjuI	GAANNNNNNNTTGG	4 cut(s)	825, 857, 1900, 1932
AluBI	AGCT	8 cut(s)	280, 417, 1615, 1757, 1898, 2174, 2327, 2360
AluI	AGCT	8 cut(s)	280, 417, 1615, 1757, 1898, 2174, 2327, 2360
Alw21I	GWGCWC	1 cut(s)	282
Alw26I	GTCTC	4 cut(s)	511, 738, 1031, 2010
AlwI	GGATC	2 cut(s)	649, 2075
AlwNI	CAGNNNCTG	1 cut(s)	131
Ama87I	CYCGRG	2 cut(s)	29, 1578
Aor13HI	TCCGGA	1 cut(s)	1781
AoxI	GGCC	9 cut(s)	545, 852, 884, 936, 968, 1376, 2267, 2319, 2377
ApaI	GGGCCC	1 cut(s)	2323
ApeKI	GCWGC	2 cut(s)	1437, 1650
ApoI	RAATTY	2 cut(s)	1120, 2384
Asp700I	GAANNNNTTC	1 cut(s)	732
AspLEI	GCGC	6 cut(s)	54, 209, 1508, 1741, 2288, 2311
AspS9I	GGNCC	6 cut(s)	545, 1784, 1790, 2319, 2320, 2392
AsuC2I	CCSGG	2 cut(s)	311, 1788
AsuHPI	GGTGA	7 cut(s)	325, 674, 1021, 1460, 1892, 2147, 2169
AvaI	CYCGRG	2 cut(s)	29, 1578
AvaII	GGWCC	3 cut(s)	1784, 1790, 2392
BaeGI	GKGCMC	2 cut(s)	2078, 2323
BanI	GGYRCC	2 cut(s)	683, 2101
BanII	GRGCYC	2 cut(s)	282, 2323
BauI	CACGAG	1 cut(s)	2034
BbsI	GAAGAC	9 cut(s)	15, 303, 695, 817, 901, 985, 1091, 1198, 1304
Bbv12I	GWGCWC	1 cut(s)	282
BbvI	GCAGC	2 cut(s)	1449, 1662
BccI	CCATC	3 cut(s)	1016, 1229, 2207
BcgI	CGANNNNNNTGC	6 cut(s)	384, 418, 581, 599, 615, 633
BciT130I	CCWGG	2 cut(s)	639, 1605
BclI	TGATCA	1 cut(s)	1462
BcnI	CCSGG	2 cut(s)	311, 1788
BcoDI	GTCTC	4 cut(s)	511, 738, 1031, 2010
BfmI	CTRYAG	1 cut(s)	738
BfoI	RGCGCY	2 cut(s)	210, 2312
BglI	GCCNNNNNGGC	1 cut(s)	883
BisI	GCNGC	3 cut(s)	455, 1438, 1651
BlsI	GCNGC	3 cut(s)	456, 1439, 1652
Bme1390I	CCNGG	4 cut(s)	311, 639, 1605, 1788
Bme18I	GGWCC	3 cut(s)	1784, 1790, 2392
BmeT110I	CYCGRG	2 cut(s)	29, 1578
BmgT120I	GGNCC	6 cut(s)	545, 1784, 1790, 2319, 2320, 2392
BmrFI	CCNGG	4 cut(s)	311, 639, 1605, 1788
BmsI	GCATC	6 cut(s)	133, 1949, 1975, 2105, 2157, 2195
BpiI	GAAGAC	9 cut(s)	15, 303, 695, 817, 901, 985, 1091, 1198, 1304
BpmI	CTGGAG	3 cut(s)	492, 1310, 2088
BpuEI	CTTGAG	7 cut(s)	181, 373, 1098, 1311, 1506, 1670, 2241
BpuMI	CCSGG	2 cut(s)	311, 1788
Bsa29I	ATCGAT	1 cut(s)	141
BsaBI	GATNNNNATC	2 cut(s)	1467, 2295
BsaHI	GRCGYC	2 cut(s)	291, 1933
BsaI	GGTCTC	2 cut(s)	1031, 2010
BsaJI	CCNNGG	3 cut(s)	637, 1604, 1903
BsaWI	WCCGGW	1 cut(s)	1781
BsaXI	ACNNNNNCTCC	6 cut(s)	490, 520, 534, 564, 1518, 1548
Bsc4I	CCNNNNNNNGG	5 cut(s)	29, 674, 758, 1660, 1909
Bse1I	ACTGG	3 cut(s)	679, 1293, 2105
Bse3DI	GCAATG	1 cut(s)	1871
Bse8I	GATNNNNATC	2 cut(s)	1467, 2295
BseAI	TCCGGA	1 cut(s)	1781
BseBI	CCWGG	2 cut(s)	639, 1605
BseCI	ATCGAT	1 cut(s)	141
BseDI	CCNNGG	3 cut(s)	637, 1604, 1903
BseGI	GGATG	9 cut(s)	335, 436, 631, 1027, 1435, 1870, 1927, 2148, 2210
BseJI	GATNNNNATC	2 cut(s)	1467, 2295
BseLI	CCNNNNNNNGG	5 cut(s)	29, 674, 758, 1660, 1909
BseMI	GCAATG	1 cut(s)	1871
BseMII	CTCAG	4 cut(s)	267, 864, 1068, 1748
BseNI	ACTGG	3 cut(s)	679, 1293, 2105
BseRI	GAGGAG	1 cut(s)	440
BseSI	GKGCMC	2 cut(s)	2078, 2323
BseXI	GCAGC	2 cut(s)	1449, 1662
BseYI	CCCAGC	1 cut(s)	2323
Bsh1236I	CGCG	1 cut(s)	54
Bsh1285I	CGRYCG	2 cut(s)	141, 595
BshFI	GGCC	9 cut(s)	547, 854, 886, 938, 970, 1378, 2269, 2321, 2379
BshNI	GGYRCC	2 cut(s)	683, 2101
BshVI	ATCGAT	1 cut(s)	141
BsiEI	CGRYCG	2 cut(s)	141, 595
BsiHKAI	GWGCWC	1 cut(s)	282
BsiHKCI	CYCGRG	2 cut(s)	29, 1578
BsiSI	CCGG	4 cut(s)	311, 1782, 1787, 2202
BslFI	GGGAC	1 cut(s)	119
BslI	CCNNNNNNNGG	5 cut(s)	29, 674, 758, 1660, 1909
BsmAI	GTCTC	4 cut(s)	511, 738, 1031, 2010
BsmFI	GGGAC	1 cut(s)	119
BsmI	GAATGC	2 cut(s)	1084, 1297
BsnI	GGCC	9 cut(s)	547, 854, 886, 938, 970, 1378, 2269, 2321, 2379
Bso31I	GGTCTC	2 cut(s)	1031, 2010
BsoBI	CYCGRG	2 cut(s)	29, 1578
Bsp120I	GGGCCC	1 cut(s)	2319
Bsp1286I	GDGCHC	3 cut(s)	282, 2078, 2323
Bsp13I	TCCGGA	1 cut(s)	1781
Bsp1407I	TGTACA	3 cut(s)	1126, 1339, 1747
Bsp143I	GATC	5 cut(s)	138, 641, 1367, 1462, 2080
Bsp19I	CCATGG	1 cut(s)	1903
BspACI	CCGC	7 cut(s)	54, 69, 95, 146, 454, 491, 1661
BspANI	GGCC	9 cut(s)	547, 854, 886, 938, 970, 1378, 2269, 2321, 2379
BspCNI	CTCAG	4 cut(s)	268, 865, 1069, 1747
BspDI	ATCGAT	1 cut(s)	141
BspEI	TCCGGA	1 cut(s)	1781
BspFNI	CGCG	1 cut(s)	54
BspHI	TCATGA	1 cut(s)	580
BspPI	GGATC	2 cut(s)	649, 2075
BspT107I	GGYRCC	2 cut(s)	683, 2101
BspTNI	GGTCTC	2 cut(s)	1031, 2010
BsrDI	GCAATG	1 cut(s)	1871
BsrGI	TGTACA	3 cut(s)	1126, 1339, 1747
BsrI	ACTGG	3 cut(s)	679, 1293, 2105
BssECI	CCNNGG	3 cut(s)	637, 1604, 1903
BssMI	GATC	5 cut(s)	138, 641, 1367, 1462, 2080
BssNI	GRCGYC	2 cut(s)	291, 1933
BssSI	CACGAG	1 cut(s)	2034
BssT1I	CCWWGG	1 cut(s)	1903
Bst2BI	CACGAG	1 cut(s)	2034
Bst2UI	CCWGG	2 cut(s)	639, 1605
Bst4CI	ACNGT	6 cut(s)	475, 596, 870, 2161, 2221, 2400
Bst6I	CTCTTC	1 cut(s)	939
BstACI	GRCGYC	2 cut(s)	291, 1933
BstAPI	GCANNNNNTGC	1 cut(s)	1503
BstAUI	TGTACA	3 cut(s)	1126, 1339, 1747
BstC8I	GCNNGC	4 cut(s)	82, 403, 1707, 1964
BstDEI	CTNAG	5 cut(s)	276, 873, 1077, 1154, 1734
BstDSI	CCRYGG	1 cut(s)	1903
BstF5I	GGATG	9 cut(s)	335, 436, 631, 1027, 1435, 1870, 1927, 2148, 2210
BstFNI	CGCG	1 cut(s)	54
BstH2I	RGCGCY	2 cut(s)	210, 2312
BstHHI	GCGC	6 cut(s)	54, 209, 1508, 1741, 2288, 2311
BstKTI	GATC	5 cut(s)	141, 644, 1370, 1465, 2083
BstMAI	GTCTC	4 cut(s)	511, 738, 1031, 2010
BstMBI	GATC	5 cut(s)	138, 641, 1367, 1462, 2080
BstMCI	CGRYCG	2 cut(s)	141, 595
BstMWI	GCNNNNNNNGC	5 cut(s)	77, 407, 626, 883, 1503
BstNI	CCWGG	2 cut(s)	639, 1605
BstNSI	RCATGY	1 cut(s)	1709
BstSCI	CCNGG	4 cut(s)	309, 637, 1603, 1786
BstSFI	CTRYAG	1 cut(s)	738
BstSLI	GKGCMC	2 cut(s)	2078, 2323
BstUI	CGCG	1 cut(s)	54
BstV1I	GCAGC	2 cut(s)	1449, 1662
BstV2I	GAAGAC	9 cut(s)	15, 303, 695, 817, 901, 985, 1091, 1198, 1304
BstX2I	RGATCY	1 cut(s)	641
BstYI	RGATCY	1 cut(s)	641
Bsu15I	ATCGAT	1 cut(s)	141
BsuRI	GGCC	9 cut(s)	547, 854, 886, 938, 970, 1378, 2269, 2321, 2379
BsuTUI	ATCGAT	1 cut(s)	141
BtgI	CCRYGG	1 cut(s)	1903
BtsCI	GGATG	9 cut(s)	335, 436, 631, 1027, 1435, 1870, 1927, 2148, 2210
BtsIMutI	CAGTG	2 cut(s)	792, 2076
Cac8I	GCNNGC	4 cut(s)	82, 403, 1707, 1964
CaiI	CAGNNNCTG	1 cut(s)	131
CciI	TCATGA	1 cut(s)	580
CfoI	GCGC	6 cut(s)	54, 209, 1508, 1741, 2288, 2311
Cfr13I	GGNCC	6 cut(s)	545, 1784, 1790, 2319, 2320, 2392
ClaI	ATCGAT	1 cut(s)	141
CpoI	CGGWCCG	1 cut(s)	1784
CseI	GACGC	3 cut(s)	299, 1343, 1922
Csp6I	GTAC	4 cut(s)	1127, 1340, 1535, 1748
CspI	CGGWCCG	1 cut(s)	1784
CviQI	GTAC	4 cut(s)	1127, 1340, 1535, 1748
DdeI	CTNAG	5 cut(s)	276, 873, 1077, 1154, 1734
DpnI	GATC	5 cut(s)	140, 643, 1369, 1464, 2082
DpnII	GATC	5 cut(s)	138, 641, 1367, 1462, 2080
Eam1104I	CTCTTC	1 cut(s)	939
EarI	CTCTTC	1 cut(s)	939
EciI	GGCGGA	1 cut(s)	58
Ecl136II	GAGCTC	1 cut(s)	280
Eco130I	CCWWGG	1 cut(s)	1903
Eco147I	AGGCCT	4 cut(s)	970, 1378, 2269, 2379
Eco24I	GRGCYC	2 cut(s)	282, 2323
Eco31I	GGTCTC	2 cut(s)	1031, 2010
Eco47I	GGWCC	3 cut(s)	1784, 1790, 2392
Eco53kI	GAGCTC	1 cut(s)	280
Eco88I	CYCGRG	2 cut(s)	29, 1578
EcoICRI	GAGCTC	1 cut(s)	280
EcoO109I	RGGNCCY	4 cut(s)	545, 1790, 2320, 2392
EcoRII	CCWGG	2 cut(s)	637, 1603
EcoT14I	CCWWGG	1 cut(s)	1903
EcoT38I	GRGCYC	2 cut(s)	282, 2323
ErhI	CCWWGG	1 cut(s)	1903
FalI	AAGNNNNNCTT	4 cut(s)	1549, 1581, 1743, 1775
FaqI	GGGAC	1 cut(s)	119
FauI	CCCGC	2 cut(s)	47, 484
FbaI	TGATCA	1 cut(s)	1462
Fnu4HI	GCNGC	3 cut(s)	455, 1438, 1651
FokI	GGATG	9 cut(s)	322, 443, 618, 1034, 1442, 1877, 1934, 2135, 2217
FriOI	GRGCYC	2 cut(s)	282, 2323
Fsp4HI	GCNGC	3 cut(s)	455, 1438, 1651
GlaI	GCGC	6 cut(s)	53, 208, 1507, 1740, 2287, 2310
GluI	GCNGC	3 cut(s)	455, 1438, 1651
GsaI	CCCAGC	1 cut(s)	2327
GsuI	CTGGAG	3 cut(s)	492, 1310, 2088
HaeII	RGCGCY	2 cut(s)	210, 2312
HaeIII	GGCC	9 cut(s)	547, 854, 886, 938, 970, 1378, 2269, 2321, 2379
HapII	CCGG	4 cut(s)	311, 1782, 1787, 2202
HgaI	GACGC	3 cut(s)	299, 1343, 1922
HhaI	GCGC	6 cut(s)	54, 209, 1508, 1741, 2288, 2311
Hin1I	GRCGYC	2 cut(s)	291, 1933
Hin6I	GCGC	6 cut(s)	52, 207, 1506, 1739, 2286, 2309
HinP1I	GCGC	6 cut(s)	52, 207, 1506, 1739, 2286, 2309
HincII	GTYRAC	3 cut(s)	1012, 1172, 1225
HindII	GTYRAC	3 cut(s)	1012, 1172, 1225
HpaII	CCGG	4 cut(s)	311, 1782, 1787, 2202
HphI	GGTGA	7 cut(s)	325, 674, 1021, 1460, 1892, 2147, 2169
Hpy166II	GTNNAC	4 cut(s)	1012, 1172, 1225, 1333
Hpy188I	TCNGA	8 cut(s)	169, 277, 421, 693, 874, 1078, 1699, 2341
Hpy8I	GTNNAC	4 cut(s)	1012, 1172, 1225, 1333
Hpy99I	CGWCG	1 cut(s)	293
HpyAV	CCTTC	1 cut(s)	722
HpyCH4III	ACNGT	6 cut(s)	475, 596, 870, 2161, 2221, 2400
HpyF10VI	GCNNNNNNNGC	5 cut(s)	77, 407, 626, 883, 1503
HpyF3I	CTNAG	5 cut(s)	276, 873, 1077, 1154, 1734
Hsp92I	GRCGYC	2 cut(s)	291, 1933
HspAI	GCGC	6 cut(s)	52, 207, 1506, 1739, 2286, 2309
Kpn2I	TCCGGA	1 cut(s)	1781
Ksp22I	TGATCA	1 cut(s)	1462
Kzo9I	GATC	5 cut(s)	138, 641, 1367, 1462, 2080
LmnI	GCTCC	4 cut(s)	148, 776, 1513, 1647
Lsp1109I	GCAGC	2 cut(s)	1449, 1662
LweI	GCATC	6 cut(s)	133, 1949, 1975, 2105, 2157, 2195
MaeIII	GTNAC	4 cut(s)	88, 587, 1352, 2135
MalI	GATC	5 cut(s)	140, 643, 1369, 1464, 2082
MboI	GATC	5 cut(s)	138, 641, 1367, 1462, 2080
MfeI	CAATTG	4 cut(s)	174, 180, 1033, 2040
MflI	RGATCY	1 cut(s)	641
MhlI	GDGCHC	3 cut(s)	282, 2078, 2323
MlyI	GAGTC	7 cut(s)	173, 230, 267, 1177, 1357, 1570, 1683
MmeI	TCCRAC	2 cut(s)	520, 1470
MroI	TCCGGA	1 cut(s)	1781
MroXI	GAANNNNTTC	1 cut(s)	732
MseI	TTAA	4 cut(s)	372, 1761, 1941, 2195
MspI	CCGG	4 cut(s)	311, 1782, 1787, 2202
MspR9I	CCNGG	4 cut(s)	311, 639, 1605, 1788
MunI	CAATTG	4 cut(s)	174, 180, 1033, 2040
Mva1269I	GAATGC	2 cut(s)	1084, 1297
MvaI	CCWGG	2 cut(s)	639, 1605
MvnI	CGCG	1 cut(s)	54
MwoI	GCNNNNNNNGC	5 cut(s)	77, 407, 626, 883, 1503
NciI	CCSGG	2 cut(s)	311, 1788
NcoI	CCATGG	1 cut(s)	1903
NdeII	GATC	5 cut(s)	138, 641, 1367, 1462, 2080
NmeAIII	GCCGAG	1 cut(s)	912
NmuCI	GTSAC	2 cut(s)	587, 2135
NspI	RCATGY	1 cut(s)	1709
PaeI	GCATGC	1 cut(s)	1709
PaeR7I	CTCGAG	1 cut(s)	1578
PagI	TCATGA	1 cut(s)	580
PceI	AGGCCT	4 cut(s)	970, 1378, 2269, 2379
PcsI	WCGNNNNNNNCGW	1 cut(s)	297
PctI	GAATGC	2 cut(s)	1084, 1297
PdmI	GAANNNNTTC	1 cut(s)	732
PflFI	GACNNNGTC	1 cut(s)	1788
PflMI	CCANNNNNTGG	1 cut(s)	674
PkrI	GCNGC	3 cut(s)	456, 1439, 1652
Ple19I	CGATCG	1 cut(s)	141
PleI	GAGTC	7 cut(s)	172, 230, 266, 1176, 1357, 1570, 1682
PpsI	GAGTC	7 cut(s)	172, 230, 266, 1176, 1357, 1570, 1682
PpuMI	RGGWCCY	2 cut(s)	1790, 2392
Psp124BI	GAGCTC	1 cut(s)	282
Psp5II	RGGWCCY	2 cut(s)	1790, 2392
Psp6I	CCWGG	2 cut(s)	637, 1603
PspFI	CCCAGC	1 cut(s)	2323
PspGI	CCWGG	2 cut(s)	637, 1603
PspOMI	GGGCCC	1 cut(s)	2319
PspPI	GGNCC	6 cut(s)	545, 1784, 1790, 2319, 2320, 2392
PspPPI	RGGWCCY	2 cut(s)	1790, 2392
PspXI	VCTCGAGB	1 cut(s)	1578
PstNI	CAGNNNCTG	1 cut(s)	131
PsuI	RGATCY	1 cut(s)	641
PsyI	GACNNNGTC	1 cut(s)	1788
PvuI	CGATCG	1 cut(s)	141
RsaI	GTAC	4 cut(s)	1128, 1341, 1536, 1749
RsaNI	GTAC	4 cut(s)	1127, 1340, 1535, 1748
Rsr2I	CGGWCCG	1 cut(s)	1784
RsrII	CGGWCCG	1 cut(s)	1784
SacI	GAGCTC	1 cut(s)	282
SaqAI	TTAA	4 cut(s)	372, 1761, 1941, 2195
SatI	GCNGC	3 cut(s)	455, 1438, 1651
Sau3AI	GATC	5 cut(s)	138, 641, 1367, 1462, 2080
Sau96I	GGNCC	6 cut(s)	545, 1784, 1790, 2319, 2320, 2392
SchI	GAGTC	7 cut(s)	173, 230, 267, 1177, 1357, 1570, 1683
ScrFI	CCNGG	4 cut(s)	311, 639, 1605, 1788
SduI	GDGCHC	3 cut(s)	282, 2078, 2323
SfaNI	GCATC	6 cut(s)	133, 1949, 1975, 2105, 2157, 2195
SfcI	CTRYAG	1 cut(s)	738
Sfr274I	CTCGAG	1 cut(s)	1578
SinI	GGWCC	3 cut(s)	1784, 1790, 2392
SlaI	CTCGAG	1 cut(s)	1578
SmlI	CTYRAG	8 cut(s)	196, 352, 1113, 1326, 1521, 1578, 1685, 2256
SmoI	CTYRAG	8 cut(s)	196, 352, 1113, 1326, 1521, 1578, 1685, 2256
SphI	GCATGC	1 cut(s)	1709
SseBI	AGGCCT	4 cut(s)	970, 1378, 2269, 2379
SsiI	CCGC	7 cut(s)	54, 69, 95, 146, 454, 491, 1661
SspI	AATATT	1 cut(s)	1625
SstI	GAGCTC	1 cut(s)	282
StuI	AGGCCT	4 cut(s)	970, 1378, 2269, 2379
StyD4I	CCNGG	4 cut(s)	309, 637, 1603, 1786
StyI	CCWWGG	1 cut(s)	1903
TaaI	ACNGT	6 cut(s)	475, 596, 870, 2161, 2221, 2400
TaqI	TCGA	9 cut(s)	46, 120, 141, 224, 231, 394, 1366, 1579, 1969
TatI	WGTACW	3 cut(s)	1126, 1339, 1747
TauI	GCSGC	1 cut(s)	457
Tru1I	TTAA	4 cut(s)	372, 1761, 1941, 2195
Tru9I	TTAA	4 cut(s)	372, 1761, 1941, 2195
TscAI	CASTG	2 cut(s)	799, 2083
TseFI	GTSAC	2 cut(s)	587, 2135
TseI	GCWGC	2 cut(s)	1437, 1650
Tsp45I	GTSAC	2 cut(s)	587, 2135
TspDTI	ATGAA	9 cut(s)	17, 21, 393, 569, 597, 741, 1779, 1959, 2052
TspGWI	ACGGA	1 cut(s)	1319
TspRI	CASTG	2 cut(s)	799, 2083
Tth111I	GACNNNGTC	1 cut(s)	1788
Van91I	CCANNNNNTGG	1 cut(s)	674
VpaK11BI	GGWCC	3 cut(s)	1784, 1790, 2392
XapI	RAATTY	2 cut(s)	1120, 2384
XceI	RCATGY	1 cut(s)	1709
XhoI	CTCGAG	1 cut(s)	1578
XmnI	GAANNNNTTC	1 cut(s)	732

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.