Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr4

Orthogroup ID

OG0002231

Physical Location & Seq

Genomic Coordinates Reverse (-)

4092608 .. 4101757

Gene Structure 9150 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000016132

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3339 bp

ATGAATGAAGAGGGAGTGGAACGTCCACTCGGGGTTCTATTGGGTCGAAAGCGCGGGAAAACCAAGTCCGCCAAGAGAGCAAGCCAAGCAACACCGCACAGCACAGAGCCACTTCAAATCGAACCAGAGCCCGTCCCAATCGATGCGGAGCCAGTTGCAATTGAGCCAGAGAGCTCAAGGAATGGCGCTAGGGTTAGTGTTTCGATGTTCGATGACTCGGTGGAGAATCACTTCAGAGTCATGCATACAATTTCCGAGCTCTGTGGCGACGCCGAAGACGACGAGCCACTCCCGGTGAGCGACATTCAACGCTTATCGTCCTCCACCACTTTCCTGAGGGAATGGGCAGATTTTAAGTATGAACCTAGAGATGTTCGATTCGCTTGCGAAGCAGAAAGCTCTGATGAGGAAGATGTTGTCAGTAGGATAAACTTGCGGCAGTTTTCTTCTGCAACTGTTCCACAGAACGAGGCGGGGGACACATCTTCTCCAGAGATGAGACAAGACTATGTGATGTATGTTGGAGGGCCTGTTTGGGCATTGGATTGGTGTCCTAGAGTTCATGAAAGTCACGACCGTCATGCAAAGTGCGAGTTTATTGCCATTGCTGCTCATCCCCCTGGATCTTCTTATCACAAGTTAGGTGAGCCACTTACTGGCAGAGGTGCCATTCAGATATGGTGTCTTCTAAATGCTAGTGTAAATGATGAAGGTGTTCCTATAGGAGACAAACCAAAAGGAGGAAATAAAAGGAGTGGAGCCACAGAAAAATGCATTGAACAAAAAAGGGGAAGACCCAGAAAGAAGCCATTAGAAGAATCTGTTGGCAAAGAGGCCACAGAAGAAAAACTGTCTGAGCCAAAAAGGCCGAGAGGAAGACCTAGAAAGAAGCCAATAGAAGAATCTATTGACAAAGAGGCCAAAGAAGAGAAATCAACTCAACCAAAGAGGCCTAGAGGAAGACCTAGAAATAAATCAATAGAAGAATCTGTTGACAACTTGGATGGGAGAACCAATTGTGCTGAGGTTCTTGCTATTGATTATCCAAAGGAATCATCTGAGTTGCATTCTATGGATTGTCTTCCTGCAAATACTCAAGGAAATTTTGTACAAGAAGATCATGACAAAAAGCAACTAAGTTATGGGCAGAGTCAACCGAAGAAGCCTAGAGGAAGACCCAGAAAGAAGCCAATAAAAGAGCCTGTTGACAATTTAGATGGGGGCAACAATAATTTTGAGGTTCTTGCTATTGAATACCAAAAGGAATCACTGGAGTTGCATTCTACGGATTGTCTTCTTGCAAATACTCAAGTGGACGCTGTACAAGAAGAAACAAGTTACAAGCAGACTCGATCAAAGAGGCCTAGAGGAATACATGGAAAGAAGCCAATAGAAGAATCTGTTGAAAACTTGGATGACAGAAGCAATACGGGTGAGGCTCTTGATGATCAATATCCAAAGGAATTATTGGAGTTGGAGGGCATGGATTGCACTCCTGAAAGTACTCAAGGAGATGAGGTACAAGATGATAGTGGTAAGAAAAGAAAAACGTACAGAAAGACTCGAGCAAAGATTCATAGAGAAAAACCTGGGGAGAAGCTAGTAGAATATTCTGTTGATAACTTGCATGGGAGCAGCCATTATGCGGAGGCTCTTGGAGTCCAATATCTCAAGGAAACATCAGAGTTGCTTGCTATGGATTGTATTCCTGCATTTACTCAGGCGCATGATGTACAAGAAGCTCTTAATGAAAAACTGGAAAGTTCCGGACCGGGTCCTCAAACAAATAATAATGTTTCAAATAGTGGTTATGCTGAAATTGGCTCAATTAGTTGTTCAGTTCCAAAGGATGTAGCATTGCCAAGAATCATATTCTGCCTAGCTCACCATGGAAAGGTTGCTTGGGATGTGAAATGGCGTCCTCTTAATGAACATGATTCCAGATGCAAGCATCGAATGGGCTATCTTGCTGTTCTGTTGGGGAACGGGTCTCTGGAAGTGTGGGAGGTTCCTGTTCCTCGTGCAATTGAAGTTATTTATTCTTCTTCATCTGGAGAGGGCACTGATCCTCGCTTTGTAAAATTGGCACCAGTATTTAGATGCTCAATGTTGAAGTCTGGTGACAAAAAAAGCATCCCTCTTACTGTGGAATGGTCAGCTGCACCACCTCACGATTACTTAATTGCCGGATGCCATGATGGAACTGTTGCTATGTGGAAGTTTTCTGCTAGTAATGTATCTCAAGATACAAGGCCTTTACTTTGTTTCAGCGCAGATACAAATCCTATTAGGGCGCTTTCTTGGGCCCCAGCTCAAAGCAATTCAGACAATGCAAATGTTATAGCTACTGCTGGACATGGAGGCCTAAAATTTTGGGACCTACGTGATCCATTCCGTCCCTTGTGGGATATCGATCCTATACCAAGGTTCATATATAGTCTGGATTGGATTCCAGATCCAAGGTGTGTTCTTCTCTCCTTTGATGATGGAACAATGAGACTTCTCAGCTTGACTAAGGCTGCCTCTGATGCCCCTGTAACAGGACAGCCCTTTGCTGGAACAAAACAACAGGGCCTGCACAATCTTGGTTGTTTGCCTTTTGCTATCTGGAGTGTTCAAGTATCAAGACTAACAGGTATGGTTGCATATTGTGGTGCAGATGGAACTGTTCTGCGCTTCCAACTTACGTCCAATGCTGTGGAGAAAGATGCTACACGAAACCGGGCCCCACATTTTCTGTGCGTGTCACTAACTGAAGAGGACTCTGTTGTGACCATCAATACCCCAGTACCACATAATCCTTTCCCATTGAAAACATCTCGTAAAGCTGAGCCAAACAAAGTGAAGAGAGAACATGATAAGATGACAACTACATCACAAGACCAAGTTTTAGCTCTTTGTTACGGTGATGATCCAGGTATTGAATTAGAATCTGGGAAAGAAGCAGCATCTCTTAGAAGCAAAACACTCAAATCTGCGGATGACCAAGCGTTAGTATGCATGGATCAAGAGCCATTTAATACCCAAGACGAAGAAATTGGAGAAAAGGGTACATCTCTTAAAGGCATTGTAAAACAGAAATCCAAGTCTAGTAAGAAAAATACAGAGGATGAACAAGAACTGGAAGGCAGAGATGAAGAGCTGATTAATACGCAGAGAGAAAAAACTGGGACCGCGTATGAAGTTTTTCCTTCCAAGCAAGTAGCAATGCACCGAGTGAGATGGAACATGAACAAGGGTTGTGAGAGATGGTTATGCTATGGAGGGGCAGCTGGAATAGTACGTTGTCAAGAGATTGTTTTGTCTGACATTGATATGAAATGGGCAAGGAAGAAATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

AT_hook

Protein Analysis

1113

Amino Acids

123.83

Weight (kDa)

5.85

Isoelectric Point (pI)

44.75

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002231)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G19485 AT1G19485
fragaria_vesca	FvH4_6g18260 FvH4_6g18260 FvH4_6g18260 FvH4_6g18260 FvH4_7g02500
malus_domestica	MD09G1081300.v1.1 MD12G1022600.v1.1
prunus_persica	Prupe.7G114200_v2.0.a1 Prupe.7G114200_v2.0.a1
pyrus_communis	pycom09g00800 pycom12g02090
rosa_chinensis	RchiOBHm_Chr3g0472691 RchiOBHm_Chr3g0472701 RchiOBHm_Chr4g0409331
rosa_laevigata	RLG00000008568 RLG00000016132 RLG00000024063
rosa_multiflora	Rmu_co8285783.1_g000001 Rmu_sc0001616.1_g000052 Rmu_sc0001616.1_g000057 Rmu_sc0001851.1_g000016 Rmu_sc0003510.1_g000010 Rmu_sc0003510.1_g000011 Rmu_sc0003510.1_g000012 Rmu_sc0034965.1_g000001
rosa_roxburghii	Rroxscaffold_5G00353840 Rroxscaffold_6G00408710
rosa_rugosa	Rorug03G0127200 Rorug04G0092400 Rorug04G0092500
rosa_samantha	Rh3AG179900 Rh3BG205800 Rh3CG202900 Rh3DG169900 Rh4AG155600 Rh4BG153800 Rh4CG164600 Rh4DG148500
rosa_wichuraiana	Rw3G016270 Rw4G012710 Rw4G012730

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	2 cut(s)	665, 2086
AccB7I	CCANNNNNTGG	1 cut(s)	656
AccII	CGCG	2 cut(s)	54, 3176
AccIII	TCCGGA	1 cut(s)	1766
AciI	CCGC	9 cut(s)	54, 69, 95, 146, 436, 473, 1646, 2978, 3174
AclWI	GGATC	7 cut(s)	631, 2060, 2381, 2408, 2450, 2906, 3012
AcsI	RAATTY	2 cut(s)	1102, 2369
AcuI	CTGAAG	2 cut(s)	217, 2775
AcyI	GRCGYC	2 cut(s)	270, 1918
AdeI	CACNNNGTG	1 cut(s)	3217
AfaI	GTAC	9 cut(s)	1110, 1323, 1504, 1521, 1553, 1734, 2790, 3052, 3282
AfiI	CCNNNNNNNGG	6 cut(s)	656, 740, 1645, 1894, 2540, 2555
AjnI	CCWGG	3 cut(s)	619, 1588, 2914
AjuI	GAANNNNNNNTTGG	4 cut(s)	807, 839, 1885, 1917
Alw21I	GWGCWC	2 cut(s)	176, 261
Alw26I	GTCTC	4 cut(s)	493, 720, 1995, 2491
AlwI	GGATC	7 cut(s)	631, 2060, 2381, 2408, 2450, 2906, 3012
AlwNI	CAGNNNCTG	1 cut(s)	2575
Ama87I	CYCGRG	2 cut(s)	29, 1563
Aor13HI	TCCGGA	1 cut(s)	1766
ApaI	GGGCCC	2 cut(s)	2308, 2728
ApeKI	GCWGC	6 cut(s)	608, 1635, 2159, 2519, 2945, 3269
ApoI	RAATTY	2 cut(s)	1102, 2369
AseI	ATTAAT	1 cut(s)	3147
Asp700I	GAANNNNTTC	3 cut(s)	230, 714, 3186
AspLEI	GCGC	6 cut(s)	54, 188, 1726, 2273, 2296, 2676
AsuC2I	CCSGG	3 cut(s)	293, 1773, 2723
AsuHPI	GGTGA	6 cut(s)	307, 656, 1445, 1877, 2132, 2918
AvaI	CYCGRG	2 cut(s)	29, 1563
AvaII	GGWCC	4 cut(s)	1769, 1775, 2377, 3171
AxyI	CCTNAGG	1 cut(s)	335
BaeGI	GKGCMC	3 cut(s)	2063, 2308, 2728
BaeI	ACNNNNGTAYC	2 cut(s)	2772, 2805
BanI	GGYRCC	2 cut(s)	665, 2086
BanII	GRGCYC	5 cut(s)	132, 176, 261, 2308, 2728
BauI	CACGAG	1 cut(s)	2019
BbsI	GAAGAC	8 cut(s)	282, 677, 799, 883, 967, 1073, 1180, 1286
Bbv12I	GWGCWC	2 cut(s)	176, 261
BbvCI	CCTCAGC	1 cut(s)	1023
BbvI	GCAGC	6 cut(s)	595, 1647, 2146, 2506, 2957, 3281
BccI	CCATC	8 cut(s)	998, 1211, 2192, 2480, 2654, 2783, 3216, 3243
BcgI	CGANNNNNNTGC	6 cut(s)	366, 400, 563, 581, 597, 615
BciT130I	CCWGG	3 cut(s)	621, 1590, 2916
BclI	TGATCA	1 cut(s)	1447
BcnI	CCSGG	3 cut(s)	293, 1773, 2723
BcoDI	GTCTC	4 cut(s)	493, 720, 1995, 2491
BfmI	CTRYAG	1 cut(s)	720
BfoI	RGCGCY	2 cut(s)	189, 2297
BglI	GCCNNNNNGGC	1 cut(s)	865
BisI	GCNGC	7 cut(s)	437, 609, 1636, 2160, 2520, 2946, 3270
BlpI	GCTNAGC	1 cut(s)	2829
BlsI	GCNGC	7 cut(s)	438, 610, 1637, 2161, 2521, 2947, 3271
BmcAI	AGTACT	1 cut(s)	1504
Bme1390I	CCNGG	6 cut(s)	293, 621, 1590, 1773, 2723, 2916
Bme18I	GGWCC	4 cut(s)	1769, 1775, 2377, 3171
BmeT110I	CYCGRG	2 cut(s)	29, 1563
BmrFI	CCNGG	6 cut(s)	293, 621, 1590, 1773, 2723, 2916
BmrI	ACTGGG	2 cut(s)	2780, 3177
BmsI	GCATC	9 cut(s)	133, 1934, 1960, 2090, 2142, 2180, 2518, 2698, 2957
BmuI	ACTGGG	2 cut(s)	2780, 3177
BpiI	GAAGAC	8 cut(s)	282, 677, 799, 883, 967, 1073, 1180, 1286
BpmI	CTGGAG	4 cut(s)	474, 1292, 2073, 2629
Bpu10I	CCTNAGC	1 cut(s)	1023
Bpu1102I	GCTNAGC	1 cut(s)	2829
BpuEI	CTTGAG	6 cut(s)	160, 1080, 1293, 1491, 1655, 2226
BpuMI	CCSGG	3 cut(s)	293, 1773, 2723
Bsa29I	ATCGAT	2 cut(s)	141, 2412
BsaAI	YACGTR	1 cut(s)	2384
BsaBI	GATNNNNATC	3 cut(s)	1452, 2280, 2412
BsaHI	GRCGYC	2 cut(s)	270, 1918
BsaI	GGTCTC	1 cut(s)	1995
BsaJI	CCNNGG	5 cut(s)	619, 1589, 1888, 2423, 2459
BsaWI	WCCGGW	1 cut(s)	1766
BsaXI	ACNNNNNCTCC	6 cut(s)	472, 502, 516, 546, 1503, 1533
Bsc4I	CCNNNNNNNGG	6 cut(s)	656, 740, 1645, 1894, 2540, 2555
Bse1I	ACTGG	8 cut(s)	152, 661, 1275, 1761, 2090, 2786, 3126, 3172
Bse21I	CCTNAGG	1 cut(s)	335
Bse3DI	GCAATG	3 cut(s)	603, 1856, 3213
Bse8I	GATNNNNATC	3 cut(s)	1452, 2280, 2412
BseAI	TCCGGA	1 cut(s)	1766
BseBI	CCWGG	3 cut(s)	621, 1590, 2916
BseCI	ATCGAT	2 cut(s)	141, 2412
BseDI	CCNNGG	5 cut(s)	619, 1589, 1888, 2423, 2459
BseGI	GGATG	9 cut(s)	613, 1009, 1420, 1855, 1912, 2133, 2195, 2986, 3115
BseJI	GATNNNNATC	3 cut(s)	1452, 2280, 2412
BseLI	CCNNNNNNNGG	6 cut(s)	656, 740, 1645, 1894, 2540, 2555
BseMI	GCAATG	3 cut(s)	603, 1856, 3213
BseMII	CTCAG	7 cut(s)	326, 846, 1014, 1050, 1733, 2518, 2820
BseNI	ACTGG	8 cut(s)	152, 661, 1275, 1761, 2090, 2786, 3126, 3172
BseSI	GKGCMC	3 cut(s)	2063, 2308, 2728
BseXI	GCAGC	6 cut(s)	595, 1647, 2146, 2506, 2957, 3281
BseYI	CCCAGC	1 cut(s)	2308
BsgI	GTGCAG	3 cut(s)	2145, 2561, 2676
Bsh1236I	CGCG	2 cut(s)	54, 3176
Bsh1285I	CGRYCG	1 cut(s)	577
BshNI	GGYRCC	2 cut(s)	665, 2086
BshVI	ATCGAT	2 cut(s)	141, 2412
BsiEI	CGRYCG	1 cut(s)	577
BsiHKAI	GWGCWC	2 cut(s)	176, 261
BsiHKCI	CYCGRG	2 cut(s)	29, 1563
BsiSI	CCGG	5 cut(s)	293, 1767, 1772, 2187, 2722
BslFI	GGGAC	5 cut(s)	119, 491, 2382, 2390, 3184
BslI	CCNNNNNNNGG	6 cut(s)	656, 740, 1645, 1894, 2540, 2555
BsmAI	GTCTC	4 cut(s)	493, 720, 1995, 2491
BsmFI	GGGAC	5 cut(s)	119, 491, 2382, 2390, 3184
BsmI	GAATGC	2 cut(s)	1066, 1279
Bso31I	GGTCTC	1 cut(s)	1995
BsoBI	CYCGRG	2 cut(s)	29, 1563
Bsp120I	GGGCCC	2 cut(s)	2304, 2724
Bsp1286I	GDGCHC	6 cut(s)	132, 176, 261, 2063, 2308, 2728
Bsp13I	TCCGGA	1 cut(s)	1766
Bsp1407I	TGTACA	3 cut(s)	1108, 1321, 1732
Bsp1720I	GCTNAGC	1 cut(s)	2829
Bsp19I	CCATGG	1 cut(s)	1888
BspACI	CCGC	9 cut(s)	54, 69, 95, 146, 436, 473, 1646, 2978, 3174
BspCNI	CTCAG	7 cut(s)	327, 847, 1015, 1051, 1732, 2517, 2821
BspDI	ATCGAT	2 cut(s)	141, 2412
BspEI	TCCGGA	1 cut(s)	1766
BspFNI	CGCG	2 cut(s)	54, 3176
BspHI	TCATGA	2 cut(s)	562, 1120
BspPI	GGATC	7 cut(s)	631, 2060, 2381, 2408, 2450, 2906, 3012
BspQI	GCTCTTC	1 cut(s)	3132
BspT107I	GGYRCC	2 cut(s)	665, 2086
BspTNI	GGTCTC	1 cut(s)	1995
BsrDI	GCAATG	3 cut(s)	603, 1856, 3213
BsrGI	TGTACA	3 cut(s)	1108, 1321, 1732
BsrI	ACTGG	8 cut(s)	152, 661, 1275, 1761, 2090, 2786, 3126, 3172
BssECI	CCNNGG	5 cut(s)	619, 1589, 1888, 2423, 2459
BssNI	GRCGYC	2 cut(s)	270, 1918
BssSI	CACGAG	1 cut(s)	2019
BssT1I	CCWWGG	3 cut(s)	1888, 2423, 2459
Bst2BI	CACGAG	1 cut(s)	2019
Bst2UI	CCWGG	3 cut(s)	621, 1590, 2916
Bst4CI	ACNGT	7 cut(s)	457, 578, 852, 2146, 2206, 2668, 2906
Bst6I	CTCTTC	5 cut(s)	3, 921, 2751, 2840, 3132
BstACI	GRCGYC	2 cut(s)	270, 1918
BstAPI	GCANNNNNTGC	1 cut(s)	1488
BstAUI	TGTACA	3 cut(s)	1108, 1321, 1732
BstBAI	YACGTR	1 cut(s)	2384
BstC8I	GCNNGC	5 cut(s)	82, 385, 1692, 1949, 2576
BstDSI	CCRYGG	1 cut(s)	1888
BstENI	CCTNNNNNAGG	1 cut(s)	2538
BstF5I	GGATG	9 cut(s)	613, 1009, 1420, 1855, 1912, 2133, 2195, 2986, 3115
BstFNI	CGCG	2 cut(s)	54, 3176
BstH2I	RGCGCY	2 cut(s)	189, 2297
BstHHI	GCGC	6 cut(s)	54, 188, 1726, 2273, 2296, 2676
BstMAI	GTCTC	4 cut(s)	493, 720, 1995, 2491
BstMCI	CGRYCG	1 cut(s)	577
BstMWI	GCNNNNNNNGC	7 cut(s)	77, 86, 389, 608, 865, 1488, 2528
BstNI	CCWGG	3 cut(s)	621, 1590, 2916
BstSCI	CCNGG	6 cut(s)	291, 619, 1588, 1771, 2721, 2914
BstSFI	CTRYAG	1 cut(s)	720
BstSLI	GKGCMC	3 cut(s)	2063, 2308, 2728
BstUI	CGCG	2 cut(s)	54, 3176
BstV1I	GCAGC	6 cut(s)	595, 1647, 2146, 2506, 2957, 3281
BstV2I	GAAGAC	8 cut(s)	282, 677, 799, 883, 967, 1073, 1180, 1286
BstX2I	RGATCY	2 cut(s)	623, 2455
BstXI	CCANNNNNNTGG	1 cut(s)	2698
BstYI	RGATCY	2 cut(s)	623, 2455
Bsu15I	ATCGAT	2 cut(s)	141, 2412
Bsu36I	CCTNAGG	1 cut(s)	335
BsuTUI	ATCGAT	2 cut(s)	141, 2412
BtgI	CCRYGG	1 cut(s)	1888
BtsCI	GGATG	9 cut(s)	613, 1009, 1420, 1855, 1912, 2133, 2195, 2986, 3115
BtsIMutI	CAGTG	2 cut(s)	1268, 2061
Cac8I	GCNNGC	5 cut(s)	82, 385, 1692, 1949, 2576
CaiI	CAGNNNCTG	1 cut(s)	2575
CciI	TCATGA	2 cut(s)	562, 1120
CfoI	GCGC	6 cut(s)	54, 188, 1726, 2273, 2296, 2676
ClaI	ATCGAT	2 cut(s)	141, 2412
CpoI	CGGWCCG	1 cut(s)	1769
CseI	GACGC	3 cut(s)	278, 1325, 1907
Csp6I	GTAC	9 cut(s)	1109, 1322, 1503, 1520, 1552, 1733, 2789, 3051, 3281
CspI	CGGWCCG	1 cut(s)	1769
CviQI	GTAC	9 cut(s)	1109, 1322, 1503, 1520, 1552, 1733, 2789, 3051, 3281
DraIII	CACNNNGTG	1 cut(s)	3217
Eam1104I	CTCTTC	5 cut(s)	3, 921, 2751, 2840, 3132
EarI	CTCTTC	5 cut(s)	3, 921, 2751, 2840, 3132
EciI	GGCGGA	1 cut(s)	58
Ecl136II	GAGCTC	2 cut(s)	174, 259
Eco130I	CCWWGG	3 cut(s)	1888, 2423, 2459
Eco147I	AGGCCT	4 cut(s)	952, 1363, 2254, 2364
Eco24I	GRGCYC	5 cut(s)	132, 176, 261, 2308, 2728
Eco31I	GGTCTC	1 cut(s)	1995
Eco32I	GATATC	1 cut(s)	2410
Eco47I	GGWCC	4 cut(s)	1769, 1775, 2377, 3171
Eco53kI	GAGCTC	2 cut(s)	174, 259
Eco57I	CTGAAG	2 cut(s)	217, 2775
Eco81I	CCTNAGG	1 cut(s)	335
Eco88I	CYCGRG	2 cut(s)	29, 1563
EcoICRI	GAGCTC	2 cut(s)	174, 259
EcoNI	CCTNNNNNAGG	1 cut(s)	2538
EcoO109I	RGGNCCY	6 cut(s)	527, 1775, 2305, 2377, 2572, 2725
EcoRII	CCWGG	3 cut(s)	619, 1588, 2914
EcoRV	GATATC	1 cut(s)	2410
EcoT14I	CCWWGG	3 cut(s)	1888, 2423, 2459
EcoT22I	ATGCAT	3 cut(s)	246, 776, 3002
EcoT38I	GRGCYC	5 cut(s)	132, 176, 261, 2308, 2728
ErhI	CCWWGG	3 cut(s)	1888, 2423, 2459
FalI	AAGNNNNNCTT	2 cut(s)	1728, 1760
FaqI	GGGAC	5 cut(s)	119, 491, 2382, 2390, 3184
FauI	CCCGC	2 cut(s)	47, 466
FbaI	TGATCA	1 cut(s)	1447
Fnu4HI	GCNGC	7 cut(s)	437, 609, 1636, 2160, 2520, 2946, 3270
FokI	GGATG	9 cut(s)	600, 1016, 1427, 1862, 1919, 2120, 2202, 2993, 3122
FriOI	GRGCYC	5 cut(s)	132, 176, 261, 2308, 2728
Fsp4HI	GCNGC	7 cut(s)	437, 609, 1636, 2160, 2520, 2946, 3270
GlaI	GCGC	6 cut(s)	53, 187, 1725, 2272, 2295, 2675
GluI	GCNGC	7 cut(s)	437, 609, 1636, 2160, 2520, 2946, 3270
GsaI	CCCAGC	1 cut(s)	2312
GsuI	CTGGAG	4 cut(s)	474, 1292, 2073, 2629
HaeII	RGCGCY	2 cut(s)	189, 2297
HapII	CCGG	5 cut(s)	293, 1767, 1772, 2187, 2722
HgaI	GACGC	3 cut(s)	278, 1325, 1907
HhaI	GCGC	6 cut(s)	54, 188, 1726, 2273, 2296, 2676
Hin1I	GRCGYC	2 cut(s)	270, 1918
Hin6I	GCGC	6 cut(s)	52, 186, 1724, 2271, 2294, 2674
HinP1I	GCGC	6 cut(s)	52, 186, 1724, 2271, 2294, 2674
HincII	GTYRAC	3 cut(s)	994, 1154, 1207
HindII	GTYRAC	3 cut(s)	994, 1154, 1207
HpaII	CCGG	5 cut(s)	293, 1767, 1772, 2187, 2722
HphI	GGTGA	6 cut(s)	307, 656, 1445, 1877, 2132, 2918
Hpy166II	GTNNAC	5 cut(s)	26, 994, 1154, 1207, 1315
Hpy8I	GTNNAC	5 cut(s)	26, 994, 1154, 1207, 1315
Hpy99I	CGWCG	2 cut(s)	272, 284
HpyAV	CCTTC	3 cut(s)	704, 3119, 3201
HpyCH4III	ACNGT	7 cut(s)	457, 578, 852, 2146, 2206, 2668, 2906
HpyCH4IV	ACGT	5 cut(s)	22, 1550, 2383, 2687, 3283
HpyF10VI	GCNNNNNNNGC	7 cut(s)	77, 86, 389, 608, 865, 1488, 2528
HpySE526I	ACGT	5 cut(s)	22, 1550, 2383, 2687, 3283
Hsp92I	GRCGYC	2 cut(s)	270, 1918
HspAI	GCGC	6 cut(s)	52, 186, 1724, 2271, 2294, 2674
Kpn2I	TCCGGA	1 cut(s)	1766
Ksp22I	TGATCA	1 cut(s)	1447
LguI	GCTCTTC	1 cut(s)	3132
LmnI	GCTCC	3 cut(s)	148, 758, 1632
Lsp1109I	GCAGC	6 cut(s)	595, 1647, 2146, 2506, 2957, 3281
LweI	GCATC	9 cut(s)	133, 1934, 1960, 2090, 2142, 2180, 2518, 2698, 2957
MaeII	ACGT	5 cut(s)	22, 1550, 2383, 2687, 3283
MaeIII	GTNAC	7 cut(s)	569, 1337, 2120, 2536, 2745, 2770, 2900
MfeI	CAATTG	3 cut(s)	159, 1015, 2025
MflI	RGATCY	2 cut(s)	623, 2455
MhlI	GDGCHC	6 cut(s)	132, 176, 261, 2063, 2308, 2728
MlyI	GAGTC	7 cut(s)	209, 246, 1159, 1342, 1555, 1668, 2756
MmeI	TCCRAC	3 cut(s)	502, 1455, 2704
Mph1103I	ATGCAT	3 cut(s)	246, 776, 3002
MroI	TCCGGA	1 cut(s)	1766
MroXI	GAANNNNTTC	3 cut(s)	230, 714, 3186
MseI	TTAA	7 cut(s)	354, 1746, 1926, 2180, 3018, 3060, 3147
MslI	CAYNNNNRTG	1 cut(s)	3314
MspA1I	CMGCKG	2 cut(s)	2159, 3272
MspI	CCGG	5 cut(s)	293, 1767, 1772, 2187, 2722
MspR9I	CCNGG	6 cut(s)	293, 621, 1590, 1773, 2723, 2916
MunI	CAATTG	3 cut(s)	159, 1015, 2025
Mva1269I	GAATGC	2 cut(s)	1066, 1279
MvaI	CCWGG	3 cut(s)	621, 1590, 2916
MvnI	CGCG	2 cut(s)	54, 3176
MwoI	GCNNNNNNNGC	7 cut(s)	77, 86, 389, 608, 865, 1488, 2528
NciI	CCSGG	3 cut(s)	293, 1773, 2723
NcoI	CCATGG	1 cut(s)	1888
NmeAIII	GCCGAG	1 cut(s)	894
NmuCI	GTSAC	4 cut(s)	569, 2120, 2745, 2770
NsiI	ATGCAT	3 cut(s)	246, 776, 3002
PaeR7I	CTCGAG	1 cut(s)	1563
PagI	TCATGA	2 cut(s)	562, 1120
PceI	AGGCCT	4 cut(s)	952, 1363, 2254, 2364
PciSI	GCTCTTC	1 cut(s)	3132
PcsI	WCGNNNNNNNCGW	1 cut(s)	276
PctI	GAATGC	2 cut(s)	1066, 1279
PdmI	GAANNNNTTC	3 cut(s)	230, 714, 3186
PflFI	GACNNNGTC	1 cut(s)	1773
PflMI	CCANNNNNTGG	1 cut(s)	656
PkrI	GCNGC	7 cut(s)	438, 610, 1637, 2161, 2521, 2947, 3271
PleI	GAGTC	7 cut(s)	209, 245, 1158, 1342, 1555, 1667, 2756
PpsI	GAGTC	7 cut(s)	209, 245, 1158, 1342, 1555, 1667, 2756
Ppu21I	YACGTR	1 cut(s)	2384
PpuMI	RGGWCCY	2 cut(s)	1775, 2377
PshBI	ATTAAT	1 cut(s)	3147
Psp124BI	GAGCTC	2 cut(s)	176, 261
Psp5II	RGGWCCY	2 cut(s)	1775, 2377
Psp6I	CCWGG	3 cut(s)	619, 1588, 2914
PspFI	CCCAGC	1 cut(s)	2308
PspGI	CCWGG	3 cut(s)	619, 1588, 2914
PspOMI	GGGCCC	2 cut(s)	2304, 2724
PspPPI	RGGWCCY	2 cut(s)	1775, 2377
PspXI	VCTCGAGB	1 cut(s)	1563
PstNI	CAGNNNCTG	1 cut(s)	2575
PsuI	RGATCY	2 cut(s)	623, 2455
PsyI	GACNNNGTC	1 cut(s)	1773
PvuII	CAGCTG	2 cut(s)	2159, 3272
RsaI	GTAC	9 cut(s)	1110, 1323, 1504, 1521, 1553, 1734, 2790, 3052, 3282
RsaNI	GTAC	9 cut(s)	1109, 1322, 1503, 1520, 1552, 1733, 2789, 3051, 3281
RseI	CAYNNNNRTG	1 cut(s)	3314
Rsr2I	CGGWCCG	1 cut(s)	1769
RsrII	CGGWCCG	1 cut(s)	1769
SacI	GAGCTC	2 cut(s)	176, 261
SapI	GCTCTTC	1 cut(s)	3132
SaqAI	TTAA	7 cut(s)	354, 1746, 1926, 2180, 3018, 3060, 3147
SatI	GCNGC	7 cut(s)	437, 609, 1636, 2160, 2520, 2946, 3270
ScaI	AGTACT	1 cut(s)	1504
SchI	GAGTC	7 cut(s)	209, 246, 1159, 1342, 1555, 1668, 2756
ScrFI	CCNGG	6 cut(s)	293, 621, 1590, 1773, 2723, 2916
SduI	GDGCHC	6 cut(s)	132, 176, 261, 2063, 2308, 2728
SfaNI	GCATC	9 cut(s)	133, 1934, 1960, 2090, 2142, 2180, 2518, 2698, 2957
SfcI	CTRYAG	1 cut(s)	720
Sfr274I	CTCGAG	1 cut(s)	1563
SinI	GGWCC	4 cut(s)	1769, 1775, 2377, 3171
SlaI	CTCGAG	1 cut(s)	1563
SmiMI	CAYNNNNRTG	1 cut(s)	3314
SmlI	CTYRAG	7 cut(s)	175, 1095, 1308, 1506, 1563, 1670, 2241
SmoI	CTYRAG	7 cut(s)	175, 1095, 1308, 1506, 1563, 1670, 2241
SseBI	AGGCCT	4 cut(s)	952, 1363, 2254, 2364
SsiI	CCGC	9 cut(s)	54, 69, 95, 146, 436, 473, 1646, 2978, 3174
SspI	AATATT	1 cut(s)	1610
SstI	GAGCTC	2 cut(s)	176, 261
StuI	AGGCCT	4 cut(s)	952, 1363, 2254, 2364
StyD4I	CCNGG	6 cut(s)	291, 619, 1588, 1771, 2721, 2914
StyI	CCWWGG	3 cut(s)	1888, 2423, 2459
TaaI	ACNGT	7 cut(s)	457, 578, 852, 2146, 2206, 2668, 2906
TaiI	ACGT	5 cut(s)	25, 1553, 2386, 2690, 3286
TatI	WGTACW	4 cut(s)	1108, 1321, 1502, 1732
TauI	GCSGC	1 cut(s)	439
Tru1I	TTAA	7 cut(s)	354, 1746, 1926, 2180, 3018, 3060, 3147
Tru9I	TTAA	7 cut(s)	354, 1746, 1926, 2180, 3018, 3060, 3147
TscAI	CASTG	2 cut(s)	1275, 2068
TseFI	GTSAC	4 cut(s)	569, 2120, 2745, 2770
TseI	GCWGC	6 cut(s)	608, 1635, 2159, 2519, 2945, 3269
Tsp45I	GTSAC	4 cut(s)	569, 2120, 2745, 2770
TspGWI	ACGGA	2 cut(s)	1301, 2384
TspRI	CASTG	2 cut(s)	1275, 2068
Tth111I	GACNNNGTC	1 cut(s)	1773
Van91I	CCANNNNNTGG	1 cut(s)	656
VpaK11BI	GGWCC	4 cut(s)	1769, 1775, 2377, 3171
VspI	ATTAAT	1 cut(s)	3147
XagI	CCTNNNNNAGG	1 cut(s)	2538
XapI	RAATTY	2 cut(s)	1102, 2369
XhoI	CTCGAG	1 cut(s)	1563
XmnI	GAANNNNTTC	3 cut(s)	230, 714, 3186
ZrmI	AGTACT	1 cut(s)	1504
Zsp2I	ATGCAT	3 cut(s)	246, 776, 3002

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.